>BNA3_YEAST (P47039) Probable aminotransferase BNA3 (EC 2.6.1.-) (Biosynthesis|
           of nicotinic acid protein 3)
          Length = 444

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
 Frame = +2

Query: 362 DVMSLAQGVVYWQPPETALNKVKEVVWEPATSKYGADDGXXXXXXXXXXXXX--XXXXXX 535
           ++++L QG   + PP+ A+ + ++ +  P  ++Y    G                     
Sbjct: 55  ELINLGQGFFSYSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELK 114

Query: 536 XSSVMVTAGANQAFVNLVLTLCDAGDSVVMF 628
             +V VT GAN+  ++ ++ L +AGD V++F
Sbjct: 115 AENVTVTTGANEGILSCLMGLLNAGDEVIVF 145

>YDT4_SCHPO (O14209) Hypothetical aminotransferase C6B12.04c (EC 2.6.1.-)|
          Length = 421

 Score = 37.4 bits (85), Expect = 0.037
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
 Frame = +2

Query: 368 MSLAQGVVYWQPPETALNKVKEVVWEPATSKYGADDGXXXXXXXXXXXXXXXXXXXXS-- 541
           +SL+QG   + PP+  L+  K+ + E A ++Y    G                    +  
Sbjct: 35  VSLSQGFFNYNPPKFVLDAAKKSIDEVACNQYSHTRGRPSLRKALSEAYSPYFKRTLNPD 94

Query: 542 -SVMVTAGANQAFVNLVLTLCDAGDSVVM 625
             ++VTAGAN+ F ++     + GD V++
Sbjct: 95  TEIVVTAGANEGFFSVFAAFLNPGDEVIV 123

>CXCR2_HUMAN (P25025) High affinity interleukin-8 receptor B (IL-8R B) (CXCR-2)|
           (GRO/MGSA receptor) (IL-8 receptor type 2) (CD182
           antigen) (CDw128b)
          Length = 360

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 463 IFTGCWFPYNFLDLVQGCLRRLPINNSLRKRHHI 362
           IF  CW PYN + L    +R   I  +  +R+HI
Sbjct: 259 IFLLCWLPYNLVLLADTLMRTQVIQETCERRNHI 292

>CXCR2_PANTR (Q28807) High affinity interleukin-8 receptor B (IL-8R B) (CXCR-2)|
           (CD182 antigen) (Fragment)
          Length = 353

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 463 IFTGCWFPYNFLDLVQGCLRRLPINNSLRKRHHI 362
           IF  CW PYN + L    +R   I  +  +R+HI
Sbjct: 256 IFLLCWLPYNLVLLADTLMRTQVIQETCERRNHI 289

>CXCR2_GORGO (Q28422) High affinity interleukin-8 receptor B (IL-8R B) (CXCR-2)|
           (CD182 antigen) (Fragment)
          Length = 353

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 463 IFTGCWFPYNFLDLVQGCLRRLPINNSLRKRHHI 362
           IF  CW PYN + L    +R   I  +  +R+HI
Sbjct: 256 IFLLCWLPYNLVLLADTLMRTQVIQETCERRNHI 289

>CF075_RAT (Q7TNK6) Putative RNA methylase C6orf75 homolog (EC 2.1.1.-)|
          Length = 463

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 9/74 (12%)
 Frame = +2

Query: 254 RRSPEAMGSFAKLAK---RCVETEAPVMVKIQ------ELLRGATDVMSLAQGVVYWQPP 406
           R S    GS  ++ K   +C E+  PV +         +L+  A + + L   +VYW P 
Sbjct: 314 RESTRRTGSQKEILKGIEKCPESHVPVSLTYHLSDMFLDLINFAAETLVLGGRLVYWLPV 373

Query: 407 ETALNKVKEVVWEP 448
            T     K V W P
Sbjct: 374 YTPEYTEKMVPWHP 387

>LMNA_CHICK (P13648) Lamin-A|
          Length = 657

 Score = 30.0 bits (66), Expect = 6.0
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
 Frame = +1

Query: 37  QSSGSGVGE--LARSGSVGDYGPRARGPCP 120
           +SSG G+GE  L RS  +G  GPR + P P
Sbjct: 622 RSSGGGIGEGLLGRSYVLGGAGPRRQAPAP 651

>REV_HV1J3 (P12484) REV protein (Anti-repression transactivator protein)|
           (ART/TRS) (Fragment)
          Length = 113

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = +3

Query: 84  WRLRTQSQRSLSG----NYLGRPSSQFHAFLAPPRPACLPC 194
           WR R +  RS+SG    NYLGRP+      L P     L C
Sbjct: 42  WRQRQRQIRSISGWIISNYLGRPAEPVPLQLPPLERLTLDC 82

>CXCR1_PANTR (P55920) High affinity interleukin-8 receptor A (IL-8R A) (IL-8|
           receptor type 1) (CXCR-1) (CD181 antigen)
          Length = 350

 Score = 29.6 bits (65), Expect = 7.8
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = -2

Query: 463 IFTGCWFPYNFLDLVQGCLRRLPINNSLRKRHHI 362
           IF  CW PYN + L    +R   I  S  +R++I
Sbjct: 250 IFLLCWLPYNLVLLADTLMRTQVIQESCERRNNI 283


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,375,678
Number of Sequences: 219361
Number of extensions: 1565848
Number of successful extensions: 6478
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6461
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)