| Clone Name | basd16d22 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189523.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1733 Score = 335 bits (169), Expect = 1e-88 Identities = 289/329 (87%) Strand = Plus / Plus Query: 304 cgtggagacggaggcgccggtcatggtgaagatacaagagctgcttcgaggggccacgga 363 |||||||||||| |||||||||||||| ||||| || || ||||||||||| || ||| Sbjct: 209 cgtggagacggaagcgccggtcatggtcaagatgcaggaattgcttcgagggaacaagga 268 Query: 364 tgtgatgtcgcttgcgcagggagttgtttattggcaacctcctgagacagccctgaacaa 423 |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| || Sbjct: 269 tgtgatgtcgcttgcgcagggagttgtttattggcagcctcctgaggcagctatgaataa 328 Query: 424 ggtcaaggaagttgtatgggaaccagcaaccagtaaatatggtgctgatgatggccttcc 483 | | || ||| |||||||||||||| ||| |||||||||||| |||||||||| ||||| Sbjct: 329 gattaaagaaattgtatgggaaccatcaatcagtaaatatggctctgatgatggtcttcc 388 Query: 484 cgagcttcgagaagcacttctcgagaagcttcgcagggagaataagctaaccaagtcgtc 543 || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 389 tgaactccgagaagcacttctcgagaagctgcgcagagagaataagctaaccaagtcgtc 448 Query: 544 agttatggtgactgctggtgcaaatcaggcttttgtaaacctggttctgaccctttgcga 603 | ||||||| || |||||||||||||||| |||||||| |||| || |||||||| || Sbjct: 449 aattatggttacctctggtgcaaatcaggcctttgtaaatgtggtcctcaccctttgtga 508 Query: 604 tgctggtgattcagttgtcatgtttgcac 632 |||||| ||| |||||||||||||||||| Sbjct: 509 tgctggggatgcagttgtcatgtttgcac 537
>dbj|AK067702.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N03, full insert sequence Length = 1734 Score = 327 bits (165), Expect = 3e-86 Identities = 288/329 (87%) Strand = Plus / Plus Query: 304 cgtggagacggaggcgccggtcatggtgaagatacaagagctgcttcgaggggccacgga 363 |||||||||||| |||||||||||||| ||||| || || ||||||||||| || ||| Sbjct: 210 cgtggagacggaagcgccggtcatggtcaagatgcaggaattgcttcgagggaacaagga 269 Query: 364 tgtgatgtcgcttgcgcagggagttgtttattggcaacctcctgagacagccctgaacaa 423 |||||||||||||||||||||||||||||||||||| ||||||||| |||| |||| || Sbjct: 270 tgtgatgtcgcttgcgcagggagttgtttattggcagcctcctgaggcagctatgaataa 329 Query: 424 ggtcaaggaagttgtatgggaaccagcaaccagtaaatatggtgctgatgatggccttcc 483 | | || ||| |||||||||||||| ||| |||||||||||| ||| |||||| ||||| Sbjct: 330 gattaaagaaattgtatgggaaccatcaatcagtaaatatggctctgttgatggtcttcc 389 Query: 484 cgagcttcgagaagcacttctcgagaagcttcgcagggagaataagctaaccaagtcgtc 543 || || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 390 tgaactccgagaagcacttctcgagaagctgcgcagagagaataagctaaccaagtcgtc 449 Query: 544 agttatggtgactgctggtgcaaatcaggcttttgtaaacctggttctgaccctttgcga 603 | ||||||| || |||||||||||||||| |||||||| |||| || |||||||| || Sbjct: 450 aattatggttacctctggtgcaaatcaggcctttgtaaatgtggtcctcaccctttgtga 509 Query: 604 tgctggtgattcagttgtcatgtttgcac 632 |||||| ||| |||||||||||||||||| Sbjct: 510 tgctggggatgcagttgtcatgtttgcac 538
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 379 gcagggagttgtttattggcaacctcctgagacagccctgaacaaggtcaaggaagttgt 438 ||||||||||||||||||||| ||||||||| |||| |||| ||| | || ||| |||| Sbjct: 4055528 gcagggagttgtttattggcagcctcctgaggcagctatgaataagattaaagaaattgt 4055469 Query: 439 atgggaaccagcaaccagtaaatatggtgctgatgatggccttcccgagcttcgagaagc 498 |||||||||| ||| |||||||||||| |||||||||| ||||| || || |||||||| Sbjct: 4055468 atgggaaccatcaatcagtaaatatggctctgatgatggtcttcctgaactccgagaagc 4055409 Query: 499 acttctcgagaag 511 ||||||||||||| Sbjct: 4055408 acttctcgagaag 4055396 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 510 agcttcgcagggagaataagctaaccaagtcgtcagttatggtgactgctggtgcaaatc 569 |||| ||||| |||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 4054171 agctgcgcagagagaataagctaaccaagtcgtcaattatggttacctctggtgcaaatc 4054112 Query: 570 agg 572 ||| Sbjct: 4054111 agg 4054109 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 569 caggcttttgtaaacctggttctgaccctttgcgatgctggtgattcagttgtcatgttt 628 ||||| |||||||| |||| || |||||||| |||||||| ||| |||||||||||||| Sbjct: 4053870 caggcctttgtaaatgtggtcctcaccctttgtgatgctggggatgcagttgtcatgttt 4053811 Query: 629 gcac 632 |||| Sbjct: 4053810 gcac 4053807 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 345 tgcttcgaggggccacggatgtgatgtcgcttgcgcagg 383 ||||||||||| || ||||||||||||||||||||||| Sbjct: 4056064 tgcttcgagggaacaaggatgtgatgtcgcttgcgcagg 4056026 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 cgtggagacggaggcgccggtcatggt 330 |||||||||||| |||||||||||||| Sbjct: 4056215 cgtggagacggaagcgccggtcatggt 4056189
>dbj|AP002903.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0509B06 Length = 104515 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 379 gcagggagttgtttattggcaacctcctgagacagccctgaacaaggtcaaggaagttgt 438 ||||||||||||||||||||| ||||||||| |||| |||| ||| | || ||| |||| Sbjct: 22271 gcagggagttgtttattggcagcctcctgaggcagctatgaataagattaaagaaattgt 22212 Query: 439 atgggaaccagcaaccagtaaatatggtgctgatgatggccttcccgagcttcgagaagc 498 |||||||||| ||| |||||||||||| |||||||||| ||||| || || |||||||| Sbjct: 22211 atgggaaccatcaatcagtaaatatggctctgatgatggtcttcctgaactccgagaagc 22152 Query: 499 acttctcgagaag 511 ||||||||||||| Sbjct: 22151 acttctcgagaag 22139 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 510 agcttcgcagggagaataagctaaccaagtcgtcagttatggtgactgctggtgcaaatc 569 |||| ||||| |||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 20914 agctgcgcagagagaataagctaaccaagtcgtcaattatggttacctctggtgcaaatc 20855 Query: 570 agg 572 ||| Sbjct: 20854 agg 20852 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 569 caggcttttgtaaacctggttctgaccctttgcgatgctggtgattcagttgtcatgttt 628 ||||| |||||||| |||| || |||||||| |||||||| ||| |||||||||||||| Sbjct: 20613 caggcctttgtaaatgtggtcctcaccctttgtgatgctggggatgcagttgtcatgttt 20554 Query: 629 gcac 632 |||| Sbjct: 20553 gcac 20550 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 345 tgcttcgaggggccacggatgtgatgtcgcttgcgcagg 383 ||||||||||| || ||||||||||||||||||||||| Sbjct: 22807 tgcttcgagggaacaaggatgtgatgtcgcttgcgcagg 22769 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 cgtggagacggaggcgccggtcatggt 330 |||||||||||| |||||||||||||| Sbjct: 22958 cgtggagacggaagcgccggtcatggt 22932
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 129 bits (65), Expect = 1e-26 Identities = 116/133 (87%) Strand = Plus / Minus Query: 379 gcagggagttgtttattggcaacctcctgagacagccctgaacaaggtcaaggaagttgt 438 ||||||||||||||||||||| ||||||||| |||| |||| ||| | || ||| |||| Sbjct: 2499 gcagggagttgtttattggcagcctcctgaggcagctatgaataagattaaagaaattgt 2440 Query: 439 atgggaaccagcaaccagtaaatatggtgctgatgatggccttcccgagcttcgagaagc 498 |||||||||| ||| |||||||||||| |||||||||| ||||| || || |||||||| Sbjct: 2439 atgggaaccatcaatcagtaaatatggctctgatgatggtcttcctgaactccgagaagc 2380 Query: 499 acttctcgagaag 511 ||||||||||||| Sbjct: 2379 acttctcgagaag 2367 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 510 agcttcgcagggagaataagctaaccaagtcgtcagttatggtgactgctggtgcaaatc 569 |||| ||||| |||||||||||||||||||||||| ||||||| || |||||||||||| Sbjct: 1142 agctgcgcagagagaataagctaaccaagtcgtcaattatggttacctctggtgcaaatc 1083 Query: 570 agg 572 ||| Sbjct: 1082 agg 1080 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 569 caggcttttgtaaacctggttctgaccctttgcgatgctggtgattcagttgtcatgttt 628 ||||| |||||||| |||| || |||||||| |||||||| ||| |||||||||||||| Sbjct: 841 caggcctttgtaaatgtggtcctcaccctttgtgatgctggggatgcagttgtcatgttt 782 Query: 629 gcac 632 |||| Sbjct: 781 gcac 778 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 345 tgcttcgaggggccacggatgtgatgtcgcttgcgcagg 383 ||||||||||| || ||||||||||||||||||||||| Sbjct: 3035 tgcttcgagggaacaaggatgtgatgtcgcttgcgcagg 2997 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 304 cgtggagacggaggcgccggtcatggt 330 |||||||||||| |||||||||||||| Sbjct: 3186 cgtggagacggaagcgccggtcatggt 3160
>ref|NM_106685.3| Arabidopsis thaliana transaminase/ transferase, transferring nitrogenous groups AT1G80360 mRNA, complete cds Length = 1466 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 527 aagctaaccaagtcgtcagttatggtgactgctggtgcaaatcaggcttttgtaaacctg 586 ||||||||||| || ||| ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 300 aagctaaccaattcacaagtgatggttactgcaggtgccaatcaggcgtttgtgaacctt 359 Query: 587 gttctgaccctttgcgatgctggtgattcagttgtcatgtttg 629 ||| | || | || |||||||||||||| ||||||||||||| Sbjct: 360 gttattacattatgtgatgctggtgattcggttgtcatgtttg 402
>gb|BT008854.1| Arabidopsis thaliana At1g80360 mRNA, complete cds Length = 1185 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 527 aagctaaccaagtcgtcagttatggtgactgctggtgcaaatcaggcttttgtaaacctg 586 ||||||||||| || ||| ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 256 aagctaaccaattcacaagtgatggttactgcaggtgccaatcaggcgtttgtgaacctt 315 Query: 587 gttctgaccctttgcgatgctggtgattcagttgtcatgtttg 629 ||| | || | || |||||||||||||| ||||||||||||| Sbjct: 316 gttattacattatgtgatgctggtgattcggttgtcatgtttg 358
>gb|AY093159.1| Arabidopsis thaliana putative aspartate aminotransferase (At1g80360) mRNA, complete cds Length = 1413 Score = 61.9 bits (31), Expect = 2e-06 Identities = 85/103 (82%) Strand = Plus / Plus Query: 527 aagctaaccaagtcgtcagttatggtgactgctggtgcaaatcaggcttttgtaaacctg 586 ||||||||||| || ||| ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 301 aagctaaccaattcacaagtgatggttactgcaggtgccaatcaggcgtttgtgaacctt 360 Query: 587 gttctgaccctttgcgatgctggtgattcagttgtcatgtttg 629 ||| | || | || |||||||||||||| ||||||||||||| Sbjct: 361 gttattacattatgtgatgctggtgattcggttgtcatgtttg 403
>gb|AC018848.6|AC018848 Arabidopsis thaliana chromosome 1 BAC F5I6 genomic sequence, complete sequence Length = 132990 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 602 gatgctggtgattcagttgtcatgtttg 629 |||||||||||||| ||||||||||||| Sbjct: 37338 gatgctggtgattcggttgtcatgtttg 37311
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 160 tcttagccccgccccgccccgcc 182 ||||||||||||||||||||||| Sbjct: 180120 tcttagccccgccccgccccgcc 180142
>gb|AC153909.5| Mus musculus 6 BAC RP23-190O15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226538 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 160 tcttagccccgccccgccccgcc 182 ||||||||||||||||||||||| Sbjct: 158369 tcttagccccgccccgccccgcc 158347
>ref|XM_876259.1| PREDICTED: Bos taurus similar to kinesin 2 60/70kDa isoform 2, transcript variant 4 (LOC508999), mRNA Length = 765 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 185 gccccgccccgccccgcctgcc 206
>gb|AC109232.17| Mus musculus chromosome 7, clone RP23-423P21, complete sequence Length = 201262 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 164 agccccgccccgccccgcctgc 185 |||||||||||||||||||||| Sbjct: 89054 agccccgccccgccccgcctgc 89033
>gb|AC122439.4| Mus musculus BAC clone RP24-222B4 from chromosome 3, complete sequence Length = 159703 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 64894 gccccgccccgccccgcctgcc 64873
>gb|AC161454.3| Mus musculus BAC clone RP23-332F10 from chromosome 3, complete sequence Length = 228486 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 80513 gccccgccccgccccgcctgcc 80492
>gb|AC022413.4|AC022413 Homo sapiens chromosome 5 clone CTC-205M6, complete sequence Length = 166525 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 117744 gccccgccccgccccgcctgcc 117765
>ref|NM_002406.2| Homo sapiens mannosyl (alpha-1,3-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase (MGAT1), mRNA Length = 2937 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 175 gccccgccccgccccgcctgcc 196
>emb|X55960.1|CPINTSP C.pepo intergenic spacer of rRNA genes and 3' part of the 25S rRNA gene and 5' part of the 18S rRNA gene Length = 4856 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 164 agccccgccccgccccgcctgccttc 189 ||||||||||||||||||| |||||| Sbjct: 2597 agccccgccccgccccgcccgccttc 2622 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgccttc 189 |||||||||||||||||| |||||| Sbjct: 2552 gccccgccccgccccgcccgccttc 2576
>gb|L77081.1|HUMMGAT Homo sapiens N-acetylglucosaminyltransferase I (MGAT1) gene, GC signals, exon 0 Length = 648 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 207 gccccgccccgccccgcctgcc 228
>emb|AL845495.9| Mouse DNA sequence from clone RP23-234E8 on chromosome 2, complete sequence Length = 201479 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 cttagccccgccccgccccgcc 182 |||||||||||||||||||||| Sbjct: 55562 cttagccccgccccgccccgcc 55541
>dbj|AP000902.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-692N5, complete sequences Length = 186626 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgcc 186 |||||||||||||||||||||| Sbjct: 12886 gccccgccccgccccgcctgcc 12907
>gb|AC146423.3| Pan troglodytes BAC clone RP43-25L18 from 7, complete sequence Length = 158864 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgc 185 ||||||||||||||||||||| Sbjct: 41993 gccccgccccgccccgcctgc 42013
>gb|AC148833.5| Pan troglodytes BAC clone CH251-55M19 from chromosome 7, complete sequence Length = 206418 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgc 185 ||||||||||||||||||||| Sbjct: 89066 gccccgccccgccccgcctgc 89086
>gb|AC146542.2| Gasterosteus aculeatus clone CH213-58L3, complete sequence Length = 231097 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 192 tgcttcctctcctcggatctc 212 ||||||||||||||||||||| Sbjct: 136538 tgcttcctctcctcggatctc 136558
>ref|XM_752423.1| Ustilago maydis 521 hypothetical protein (UM01369.1) partial mRNA Length = 2700 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgc 185 ||||||||||||||||||||| Sbjct: 959 gccccgccccgccccgcctgc 979
>gb|AC123818.4| Mus musculus BAC clone RP24-266A12 from chromosome 18, complete sequence Length = 169506 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 agccccgccccgccccgcctg 184 ||||||||||||||||||||| Sbjct: 133008 agccccgccccgccccgcctg 132988
>gb|AF288535.1| Pseudomonas oleovorans FadB (fadB) and beta-ketothiolase FadA (fadA) genes, complete cds Length = 3366 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 279 gcttcgccaagctggccaaga 299 ||||||||||||||||||||| Sbjct: 830 gcttcgccaagctggccaaga 850
>gb|AC005535.2| Homo sapiens PAC clone RP5-1168M19 from 7, complete sequence Length = 157813 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgc 185 ||||||||||||||||||||| Sbjct: 150634 gccccgccccgccccgcctgc 150654
>gb|AC156574.2| Mus musculus BAC clone RP23-54L14 from chromosome 14, complete sequence Length = 208155 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gttttcttccttgtctgcctg 27 ||||||||||||||||||||| Sbjct: 39203 gttttcttccttgtctgcctg 39223
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 ttagccccgccccgccccgcc 182 ||||||||||||||||||||| Sbjct: 35704 ttagccccgccccgccccgcc 35684
>gb|AC084613.1|CBRG44E08 Caenorhabditis briggsae cosmid G44E08, complete sequence Length = 41830 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 566 aatcaggcttttgtaaacctg 586 ||||||||||||||||||||| Sbjct: 41596 aatcaggcttttgtaaacctg 41576
>gb|AC155646.4| Mus musculus 6 BAC RP24-195P20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 169883 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 agccccgccccgccccgcctg 184 ||||||||||||||||||||| Sbjct: 113282 agccccgccccgccccgcctg 113302
>gb|AC153620.4| Mus musculus 6 BAC RP23-326P16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194383 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 568 tcaggcttttgtaaacctggt 588 ||||||||||||||||||||| Sbjct: 126392 tcaggcttttgtaaacctggt 126412
>emb|AL110504.6|CNS01DRB Human chromosome 14 DNA sequence BAC R-688G15 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 207117 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgc 185 ||||||||||||||||||||| Sbjct: 45447 gccccgccccgccccgcctgc 45467
>emb|AL160313.4|CNS01RH2 Human chromosome 14 DNA sequence BAC R-543C4 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166183 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctgc 185 ||||||||||||||||||||| Sbjct: 106303 gccccgccccgccccgcctgc 106323
>gb|AC151999.5| Mus musculus BAC clone RP23-98D11 from chromosome 8, complete sequence Length = 229414 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 ccccgccccgccccgcctgccttcc 190 ||||||||||||| ||||||||||| Sbjct: 115725 ccccgccccgccctgcctgccttcc 115701
>gb|AC140277.3| Mus musculus BAC clone RP23-336O18 from 5, complete sequence Length = 198919 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 162 ttagccccgccccgccccgcc 182 ||||||||||||||||||||| Sbjct: 165393 ttagccccgccccgccccgcc 165373
>emb|CT025564.10| Mouse DNA sequence from clone RP24-123J6 on chromosome 14, complete sequence Length = 165380 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gttttcttccttgtctgcctg 27 ||||||||||||||||||||| Sbjct: 28926 gttttcttccttgtctgcctg 28946
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 aaacctggttctgacccttt 599 |||||||||||||||||||| Sbjct: 1929717 aaacctggttctgacccttt 1929736
>gb|DQ214229.1| Taeniopygia guttata clone 0064P0018E07 COMM domain containing 10-like mRNA, complete sequence Length = 1421 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 91 gccccgccccgccccgcctg 72
>gb|AC166984.7| Mus musculus chromosome 15, clone RP24-359A11, complete sequence Length = 167492 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gttttcttccttgtctgcct 26 |||||||||||||||||||| Sbjct: 112008 gttttcttccttgtctgcct 111989
>gb|AY802782.1| Homo sapiens chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) (CXCL12) gene, complete cds Length = 18818 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 1867 gccccgccccgccccgcctg 1886
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 ttagccccgccccgccccgc 181 |||||||||||||||||||| Sbjct: 252776 ttagccccgccccgccccgc 252795
>gb|AC116712.11| Mus musculus chromosome 1, clone RP23-105A17, complete sequence Length = 179782 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 27019 tagccccgccccgccccgcc 27000
>ref|XM_956745.1| Neurospora crassa OR74A hypothetical protein (NCU07017.1) partial mRNA Length = 1038 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cgtggagacggaggcgccgg 323 |||||||||||||||||||| Sbjct: 852 cgtggagacggaggcgccgg 871
>ref|XM_327302.1| Neurospora crassa OR74A hypothetical protein (NCU07017.1) partial mRNA Length = 1038 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cgtggagacggaggcgccgg 323 |||||||||||||||||||| Sbjct: 852 cgtggagacggaggcgccgg 871
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cctgaacaaggtcaaggaag 434 |||||||||||||||||||| Sbjct: 641721 cctgaacaaggtcaaggaag 641740
>gb|AC126444.3| Mus musculus BAC clone RP24-136A8 from chromosome 14, complete sequence Length = 141017 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 ctgcctgcccagtgcccagtcctc 44 |||||||||||| ||||||||||| Sbjct: 42692 ctgcctgcccagagcccagtcctc 42715
>ref|XM_536506.2| PREDICTED: Canis familiaris hypothetical LOC479367 (LOC479367), mRNA Length = 1587 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 535 caagtcgtcagttatggtgactgc 558 |||||| ||||||||||||||||| Sbjct: 1432 caagtcatcagttatggtgactgc 1455
>gb|AY237157.1| EGFP expression vector pBE, complete sequence Length = 5497 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 205 gccccgccccgccccgcctg 186
>gb|AY383615.1| Homo sapiens benzodiazapine receptor (peripheral) (BZRP) gene, complete cds Length = 13942 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 588 gccccgccccgccccgcctg 569
>emb|Z82214.23|HS526I14 Human DNA sequence from clone RP3-526I14 on chromosome 22, complete sequence Length = 129389 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 5939 gccccgccccgccccgcctg 5920
>emb|AL445231.8| Human DNA sequence from clone RP11-27K13 on chromosome 1 Contains the 3' end of the PTGFRN gene for prostaglandin F2 receptor negative regulator, the IGSF2 gene for immunoglobulin superfamily member 2, a novel gene (FLJ42338), the 5' end of the TTF2 gene for RNA polymerase II transcription termination factor and a CpG island, complete sequence Length = 126847 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 569 caggcttttgtaaacctggt 588 |||||||||||||||||||| Sbjct: 78899 caggcttttgtaaacctggt 78918
>emb|AL138822.13| Human DNA sequence from clone RP11-57H24 on chromosome 13 Contains a Eukaryotic initiation factor 4A (eIF4a) pseudogene, complete sequence Length = 126502 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 181 cctgccttccctgcttcctctcct 204 |||||||||||| ||||||||||| Sbjct: 80967 cctgccttccctccttcctctcct 80990
>emb|AL137026.21| Human DNA sequence from clone RP11-20J15 on chromosome 10 Contains CXCL12 gene for chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1), two putative transcripts and two putative CpG islands, complete sequence Length = 184474 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 176320 gccccgccccgccccgcctg 176301
>emb|AL135789.18| Human DNA sequence from clone RP11-412H14 on chromosome 9q32-33.3 Contains the 5' end of one variant of the AKAP2 (PALM2) gene for A kinase (PRKA) anchor protein 2 (paralemmin 2) and a CpG island, complete sequence Length = 133394 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ccttccctgcttcctctcct 204 |||||||||||||||||||| Sbjct: 3022 ccttccctgcttcctctcct 3041
>emb|X00182.1|GGAC01 Gallus gallus cytoplasmic beta-actin gene Length = 5046 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 414 gccccgccccgccccgcctg 395
>gb|AC109322.16| Homo sapiens chromosome 8, clone CTD-3065J16, complete sequence Length = 215342 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 139837 gccccgccccgccccgcctg 139818
>gb|AC139132.8| Mus musculus chromosome 3, clone RP23-411C10, complete sequence Length = 187661 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 tgtctgcctgcccagtgccc 37 |||||||||||||||||||| Sbjct: 59659 tgtctgcctgcccagtgccc 59640
>emb|BX510940.8| Zebrafish DNA sequence from clone DKEYP-69C1 in linkage group 21, complete sequence Length = 172605 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 ttcagttgtcatgtttgcac 632 |||||||||||||||||||| Sbjct: 74028 ttcagttgtcatgtttgcac 74009 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 ttcagttgtcatgtttgcac 632 |||||||||||||||||||| Sbjct: 72078 ttcagttgtcatgtttgcac 72059
>dbj|AB210212.1| Pan troglodytes TUBB gene for beta-tubulin, complete cds, cell_line: Ericka Length = 5582 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgccccgccccgcctgccttccct 192 |||||||||| ||||||||||||| Sbjct: 592 cgccccgcccagcctgccttccct 615
>dbj|AB210211.1| Pan troglodytes TUBB gene for beta-tubulin, complete cds, cell_line: Borie Length = 5582 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgccccgccccgcctgccttccct 192 |||||||||| ||||||||||||| Sbjct: 592 cgccccgcccagcctgccttccct 615
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cctgaacaaggtcaaggaag 434 |||||||||||||||||||| Sbjct: 4561807 cctgaacaaggtcaaggaag 4561788
>gb|AF293463.1| Homo sapiens interleukin-4 induced gene-1 protein (FIG1) gene, exons 5 through 8 and partial cds; and GTPase-activating protein-like protein FLJ12168 gene, partial cds Length = 6933 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ccccgccccgccccgcctgc 185 |||||||||||||||||||| Sbjct: 3849 ccccgccccgccccgcctgc 3868
>gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequence Length = 175281 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 29677 tagccccgccccgccccgcc 29696
>gb|AE011680.1| Xanthomonas axonopodis pv. citri str. 306, section 58 of 469 of the complete genome Length = 11641 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cctgaacaaggtcaaggaag 434 |||||||||||||||||||| Sbjct: 11309 cctgaacaaggtcaaggaag 11328
>gb|AE012149.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 57 of 460 of the complete genome Length = 11492 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cctgaacaaggtcaaggaag 434 |||||||||||||||||||| Sbjct: 11135 cctgaacaaggtcaaggaag 11154
>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence Length = 218476 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 gttttcttccttgtctgcct 26 |||||||||||||||||||| Sbjct: 197935 gttttcttccttgtctgcct 197954
>gb|AC118342.2| Homo sapiens chromosome 19 clone LLNLF-161B9, complete sequence Length = 36532 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccccgccccgccccgcctgc 185 |||||||||||||||||||| Sbjct: 22378 ccccgccccgccccgcctgc 22359
>gb|AC007996.11| Homo sapiens chromosome 18, clone RP11-9E17, complete sequence Length = 182884 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ccttccctgcttcctctcct 204 |||||||||||||||||||| Sbjct: 180693 ccttccctgcttcctctcct 180712
>gb|AF491812.1| Homo sapiens DNA polymerase beta (POLB) gene, complete cds Length = 35013 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 831 tagccccgccccgccccgcc 850
>gb|AC005552.3| Homo sapiens chromosome 17, clone RP11-212E8, complete sequence Length = 165837 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttttcttccttgtctgcctg 27 |||||||||||||||||||| Sbjct: 163749 ttttcttccttgtctgcctg 163768
>gb|AF399011.1| Pseudomonas phage phiKZ, complete genome Length = 280334 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 atatggtgctgatgatggcc 479 |||||||||||||||||||| Sbjct: 193590 atatggtgctgatgatggcc 193609
>gb|U63610.1|HSPLEC1S3 Human plectin (PLEC1) gene, exons 3-32, and complete cds Length = 22693 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 5727 gccccgccccgccccgcctg 5708
>gb|AC023194.9| Homo sapiens, clone RP11-216N21, complete sequence Length = 175834 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 ggcaacctcctgagacagccctga 419 ||||||||||||||||||| |||| Sbjct: 100042 ggcaacctcctgagacagctctga 100065
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 cctgaacaaggtcaaggaag 434 |||||||||||||||||||| Sbjct: 634026 cctgaacaaggtcaaggaag 634045
>gb|AC148710.1| Macaca mulatta Major Histocompatibility Complex BAC MMU399F22, complete sequence Length = 158818 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgccccgccccgcctgccttccct 192 |||||||||| ||||||||||||| Sbjct: 20154 cgccccgcccagcctgccttccct 20177
>gb|AC148705.1| Macaca mulatta Major Histocompatibility Complex MMU348N13, complete sequence Length = 186491 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 169 cgccccgccccgcctgccttccct 192 |||||||||| ||||||||||||| Sbjct: 16239 cgccccgcccagcctgccttccct 16262
>gb|AF428265.1| Expression vector pGIpec, partial sequence Length = 561 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 343 gccccgccccgccccgcctg 324
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds Length = 3284914 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 cgccccgccccgcctgccttccct 192 |||||||||| ||||||||||||| Sbjct: 1707551 cgccccgcccagcctgccttccct 1707528
>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence Length = 202286 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 100228 gccccgccccgccccgcctg 100209
>gb|AC092636.3| Homo sapiens BAC clone RP11-353K11 from 2, complete sequence Length = 199721 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cccgccccgccccgcctgcc 186 |||||||||||||||||||| Sbjct: 14110 cccgccccgccccgcctgcc 14091
>gb|AC007595.9| Homo sapiens chromosome 16 clone RP11-109M19, complete sequence Length = 186303 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 tgcccagtgcccagtcctcc 45 |||||||||||||||||||| Sbjct: 9873 tgcccagtgcccagtcctcc 9854
>gb|AC016692.9| Homo sapiens BAC clone RP11-93E22 from 2, complete sequence Length = 137101 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cttccctgcttcctctcctc 205 |||||||||||||||||||| Sbjct: 77289 cttccctgcttcctctcctc 77270
>gb|AC083973.14| Homo sapiens chromosome 8, clone RP11-231D20, complete sequence Length = 188573 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 18625 tagccccgccccgccccgcc 18606
>gb|AC107885.5| Homo sapiens chromosome 8, clone CTD-2552G2, complete sequence Length = 163298 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 33200 tagccccgccccgccccgcc 33219
>gb|AC110605.5| Homo sapiens chromosome 17, clone CTD-2317L23, complete sequence Length = 60418 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 ttttcttccttgtctgcctg 27 |||||||||||||||||||| Sbjct: 26904 ttttcttccttgtctgcctg 26923
>gb|AC134504.2| Homo sapiens 3 BAC RP11-316F12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87167 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agccccgccccgccccgcct 183 |||||||||||||||||||| Sbjct: 62002 agccccgccccgccccgcct 61983
>gb|DQ163920.1| Bacteriophage SD1-M, complete genome Length = 281083 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 atatggtgctgatgatggcc 479 |||||||||||||||||||| Sbjct: 194684 atatggtgctgatgatggcc 194703
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region Length = 1750601 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 cgccccgccccgcctgccttccct 192 |||||||||| ||||||||||||| Sbjct: 795188 cgccccgcccagcctgccttccct 795165
>emb|AL954708.10| Zebrafish DNA sequence from clone CH211-160I4, complete sequence Length = 163996 Score = 40.1 bits (20), Expect = 8.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 430 ggaagttgtatgggaaccagcaaccagt 457 |||||||| ||||||||||||||||||| Sbjct: 13402 ggaagttg-atgggaaccagcaaccagt 13428
>gb|AC007514.5|AC007514 Homo sapiens chromosome 14 clone BACs 209A20 and 396N8 map 14q31, complete sequence Length = 177720 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tttcttccttgtctgcctgc 28 |||||||||||||||||||| Sbjct: 21853 tttcttccttgtctgcctgc 21872
>gb|AF334827.1| Cloning vector pTurbo-Cre, complete sequence Length = 5894 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 516 gccccgccccgccccgcctg 497
>gb|AC151973.4| Mus musculus BAC clone RP24-317P2 from 14, complete sequence Length = 176759 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cttccctgcttcctctcctc 205 |||||||||||||||||||| Sbjct: 60351 cttccctgcttcctctcctc 60370
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete sequence Length = 194283 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 122680 gccccgccccgccccgcctg 122661
>dbj|AP003068.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-399J13, complete sequence Length = 187934 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 agccccgccccgccccgcct 183 |||||||||||||||||||| Sbjct: 946 agccccgccccgccccgcct 965
>gb|AY450930.1| Chlamydomonas reinhardtii plus agglutinin (SAG1) gene, complete cds; and unknown gene Length = 18555 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 10030 tagccccgccccgccccgcc 10011
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 cctgaacaaggtcaaggaag 434 |||||||||||||||||||| Sbjct: 4566555 cctgaacaaggtcaaggaag 4566536
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 gcttcgccaagctggccaag 298 |||||||||||||||||||| Sbjct: 3044036 gcttcgccaagctggccaag 3044055
>emb|AJ575208.1|GGA575208 Expression vector pCLGFPA Length = 6084 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 547 gccccgccccgccccgcctg 528
>gb|AC161469.3| Gallus gallus BAC clone CH261-69M17 from chromosome ul, complete sequence Length = 186443 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 aggccgcccttcctcccagt 150 |||||||||||||||||||| Sbjct: 142664 aggccgcccttcctcccagt 142645
>emb|AL731766.27| Mouse DNA sequence from clone RP23-78B19 on chromosome 4, complete sequence Length = 144885 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ccccgccccgccccgcctgc 185 |||||||||||||||||||| Sbjct: 78343 ccccgccccgccccgcctgc 78362
>ref|NM_011273.2| Mus musculus xenotropic and polytropic retrovirus receptor 1 (Xpr1), mRNA Length = 7651 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 28 tagccccgccccgccccgcc 9
>gb|AC161464.3| Gallus gallus BAC clone CH261-163N1 from chromosome ul, complete sequence Length = 149167 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aggccgcccttcctcccagt 150 |||||||||||||||||||| Sbjct: 144587 aggccgcccttcctcccagt 144606
>gb|J04201.1|HUMPOLBA Human beta-polymerase gene, exons 1 and 2 Length = 1866 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 tagccccgccccgccccgcc 182 |||||||||||||||||||| Sbjct: 1078 tagccccgccccgccccgcc 1097
>gb|M15772.1|HUMHBVB Human DNA with a Hepatitis B virus (HBV) insertion site Length = 438 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agccccgccccgccccgcct 183 |||||||||||||||||||| Sbjct: 367 agccccgccccgccccgcct 348
>gb|M15769.1|HUMHBVA Human DNA/endogenous Hepatitis B virus (HBV) DNA, 3' junction Length = 617 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 agccccgccccgccccgcct 183 |||||||||||||||||||| Sbjct: 610 agccccgccccgccccgcct 591
>gb|L21951.1|HSPBR1 Human peripheral benzodiazepine receptor gene, exon 1 Length = 253 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 92 gccccgccccgccccgcctg 73
>dbj|AK090482.1| Homo sapiens mRNA for FLJ00404 protein Length = 4632 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gccccgccccgccccgcctg 184 |||||||||||||||||||| Sbjct: 1361 gccccgccccgccccgcctg 1380
>dbj|AP000436.5| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-34H12, complete sequences Length = 117166 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 agccccgccccgccccgcct 183 |||||||||||||||||||| Sbjct: 98688 agccccgccccgccccgcct 98707 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,197,923 Number of Sequences: 3902068 Number of extensions: 5197923 Number of successful extensions: 115711 Number of sequences better than 10.0: 110 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 115071 Number of HSP's gapped (non-prelim): 636 length of query: 632 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 609 effective length of database: 17,143,297,704 effective search space: 10440268301736 effective search space used: 10440268301736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)