ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY103931.1| Zea mays PCO140521 mRNA sequence 214 8e-53
2ref|NM_184993.1| Oryza sativa (japonica cultivar-group), mRNA 204 7e-50
3dbj|AK073162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 7e-50
4dbj|AK061347.1| Oryza sativa (japonica cultivar-group) cDNA clon... 204 7e-50
5gb|BT019096.1| Zea mays clone Contig695.F mRNA sequence 180 1e-42
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 5e-26
7gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 125 5e-26
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 5e-26
9gb|AY081942.1| Nicotiana tabacum pollen specific actin-depolymer... 72 7e-10
10ref|NM_125382.2| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING... 60 3e-06
11ref|NM_180897.1| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING... 60 3e-06
12gb|AY090336.1| Arabidopsis thaliana At1g05180/YUP8H12_21 mRNA, c... 60 3e-06
13gb|AY050460.1| Arabidopsis thaliana AT5g59890/mmn10_110 mRNA, co... 60 3e-06
14gb|AY084757.1| Arabidopsis thaliana clone 11691 mRNA, complete s... 60 3e-06
15dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 3e-06
16gb|AF102822.1|AF102822 Arabidopsis thaliana actin depolymerizing... 60 3e-06
17gb|AY485790.1| Capsicum annuum actin-depolymerizing factor mRNA,... 58 1e-05
18gb|DQ320313.1| Arachis hypogaea actin depolymerizing factor-like... 58 1e-05
19gb|BT013009.1| Lycopersicon esculentum clone 114245R, mRNA sequence 56 4e-05
20gb|AY347804.1| Malus x domestica clone 17-6 actin-depolymerizing... 56 4e-05
21gb|AY081941.1| Nicotiana tabacum pollen specific actin-depolymer... 56 4e-05
22gb|AF183903.1|AF183903 Petunia x hybrida actin-depolymerizing fa... 54 2e-04
23dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone... 54 2e-04
24ref|NM_114469.2| Arabidopsis thaliana ADF2 (ACTIN DEPOLYMERIZING... 48 0.010
25ref|XM_475079.1| Oryza sativa (japonica cultivar-group), predic... 48 0.010
26emb|Z14110.1|LLADF L.longiflorum mRNA for actin depolymerizing f... 48 0.010
27gb|BT000377.1| Arabidopsis thaliana actin depolymerizing factor ... 48 0.010
28emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing f... 48 0.010
29emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing ... 48 0.010
30gb|AF440310.1| Vitis vinifera actin depolymerizing factor (ADF) ... 48 0.010
31gb|AY064660.1| Arabidopsis thaliana actin depolymerizing factor ... 48 0.010
32gb|AF386925.1|AF386925 Arabidopsis thaliana actin depolymerizing... 48 0.010
33gb|AF370482.1|AF370482 Arabidopsis thaliana actin depolymerizing... 48 0.010
34emb|BX823115.1|CNS0A784 Arabidopsis thaliana Full-length cDNA Co... 48 0.010
35dbj|AK102177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.010
36gb|AY104025.1| Zea mays PCO095832 mRNA sequence 48 0.010
37gb|DQ306754.1| Hevea brasiliensis isolate SSH25 mRNA sequence 48 0.010
38gb|U48939.1|ATU48939 Arabidopsis thaliana actin depolymerizing f... 48 0.010
39ref|NM_114470.1| Arabidopsis thaliana ADF1 (ACTIN DEPOLYMERIZING... 44 0.16
40gb|AY062940.1| Arabidopsis thaliana putative actin depolymerizin... 44 0.16
41gb|AY035154.1| Arabidopsis thaliana putative actin depolymerizin... 44 0.16
42emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BA... 44 0.16
43emb|BX826248.1|CNS0A69V Arabidopsis thaliana Full-length cDNA Co... 44 0.16
44gb|AY085853.1| Arabidopsis thaliana clone 1907 mRNA, complete se... 44 0.16
45gb|AF102173.1|AF102173 Arabidopsis thaliana actin depolymerizing... 44 0.16
46gb|U48938.1|ATU48938 Arabidopsis thaliana actin depolymerizing f... 44 0.16
47gb|AF183904.1|AF183904 Petunia x hybrida actin-depolymerizing fa... 42 0.62
48gb|BT016543.1| Zea mays clone Contig376 mRNA sequence 40 2.5
49gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete s... 40 2.5
50gb|AY428595.1| Helianthus annuus clone HA10-7 putative actin-dep... 40 2.5
51gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome... 40 2.5
52emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing ... 40 2.5
53gb|AY038063.1| Petunia x hybrida actin-depolymerizing factor 1 g... 40 2.5
54gb|DQ088156.1| Gossypium hirsutum actin depolymerizing factor (A... 40 2.5
55gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cance... 40 2.5
56gb|AY103749.1| Zea mays PCO115125 mRNA sequence 40 2.5
57gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 40 2.5
58gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park C... 40 2.5
59ref|XM_518531.1| PREDICTED: Pan troglodytes phosphoglycerate kin... 38 9.7
60ref|NM_197397.1| Oryza sativa (japonica cultivar-group) putative... 38 9.7
61ref|XM_477589.1| Oryza sativa (japonica cultivar-group), mRNA 38 9.7
62gb|AY785359.1| Homo sapiens estrogen receptor 2 (ER beta) (ESR2)... 38 9.7
63gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 9.7
64gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, c... 38 9.7
65gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 m... 38 9.7
66gb|AC133956.4| Mus musculus BAC clone RP23-347E10 from chromosom... 38 9.7
67gb|AC124160.3| Lemur catta clone LB2-260A3, complete sequence 38 9.7
68gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosom... 38 9.7
69gb|AC124486.4| Mus musculus BAC clone RP23-451E1 from chromosome... 38 9.7
70gb|AC138605.1| Mus musculus BAC clone RP23-392L23 from chromosom... 38 9.7
71gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, comple... 38 9.7
72gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete s... 38 9.7
73gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence 38 9.7
74emb|AL358354.16| Human DNA sequence from clone RP11-522D2 on chr... 38 9.7
75emb|AL158165.15| Human DNA sequence from clone RP11-476E15 on ch... 38 9.7
76emb|AL157878.11| Human DNA sequence from clone RP11-51B13 on chr... 38 9.7
77gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, comp... 38 9.7
78emb|AL135905.6| Human DNA sequence from clone RP5-1148A21 on chr... 38 9.7
79emb|AL022068.2|HS167F1 Human DNA sequence from clone RP1-167F1 o... 38 9.7
80gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 gen... 38 9.7
81dbj|AB223981.1| Aspergillus oryzae cDNA, contig sequence: AoEST0822 38 9.7
82dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 38 9.7
83gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 geno... 38 9.7
84gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, comp... 38 9.7
85gb|DP000004.1| Lemur catta target 1 genomic scaffold 38 9.7
86gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold 38 9.7
87emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 ... 38 9.7
88dbj|AK035774.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 38 9.7
89gb|AC021504.5|AC021504 Homo sapiens chromosome 18, clone RP11-16... 38 9.7
90dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
91dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 9.7
92gb|AF215937.1|AF215937 Homo sapiens 3pv2 and 5p152 genes, comple... 38 9.7
93gb|AC019172.4| Homo sapiens BAC clone RP11-178E6 from 2, complet... 38 9.7
94gb|AC108130.3| Homo sapiens chromosome 5 clone RP11-84B12, compl... 38 9.7
95dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 38 9.7
96dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 38 9.7
97emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chrom... 38 9.7
98dbj|AK121749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.7
99dbj|AK064063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 9.7
100gb|AY109054.1| Zea mays PCO116163 mRNA sequence 38 9.7
101gb|AF179295.1|AF179295 Malus domestica putative actin depolymeri... 38 9.7
102emb|AL161756.6|CNS01RHJ Human chromosome 14 DNA sequence BAC R-7... 38 9.7
103gb|BC085077.1| Xenopus laevis hypothetical LOC495490, mRNA (cDNA... 38 9.7
104gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 38 9.7
105emb|AL840623.10| Mouse DNA sequence from clone RP23-289L17 on ch... 38 9.7
106gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 38 9.7
107emb|AL844174.2| Mouse DNA sequence from clone RP23-377G5 on chro... 38 9.7

>gb|AY103931.1| Zea mays PCO140521 mRNA sequence
          Length = 985

 Score =  214 bits (108), Expect = 8e-53
 Identities = 159/176 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcgctttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttc 60
           ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gcgctgtatgattttgattttgttactggggagaatgtgcagaaaagcaagattttcttc 451

                                                                       
Query: 61  attgcctggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaag 120
           ||||||||||||||    ||||||||||| || || ||||||||||||||||| || |||
Sbjct: 452 attgcctggtccccatcgacatcccgcatacgtgctaagatgctgtactccacgtcgaag 511

                                                                   
Query: 121 gaccgcatcaagcaagagctcgacgggttccactacgagatccaggcaactgaccc 176
           |||||||||||| | ||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 512 gaccgcatcaagtacgagcttgacgggttccactacgaaatccaggcgaccgaccc 567



to top

>ref|NM_184993.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 786

 Score =  204 bits (103), Expect = 7e-50
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                       
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
           ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 271 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 330

                                                                       
Query: 67  tggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgc 126
           ||||| ||    |||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 331 tggtctccatcaacatcccggatccgtgctaagatgctgtactccacctccaaggatcgc 390

                                                                      
Query: 127 atcaagcaagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185
           ||||||||||| || || || ||||||||||||||||||||||| ||||| || |||||
Sbjct: 391 atcaagcaagaacttgatggattccactacgagatccaggcaaccgacccaactgaggt 449



to top

>dbj|AK073162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B06, full
           insert sequence
          Length = 954

 Score =  204 bits (103), Expect = 7e-50
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                       
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
           ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 439 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 498

                                                                       
Query: 67  tggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgc 126
           ||||| ||    |||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 499 tggtctccatcaacatcccggatccgtgctaagatgctgtactccacctccaaggatcgc 558

                                                                      
Query: 127 atcaagcaagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185
           ||||||||||| || || || ||||||||||||||||||||||| ||||| || |||||
Sbjct: 559 atcaagcaagaacttgatggattccactacgagatccaggcaaccgacccaactgaggt 617



to top

>dbj|AK061347.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F01, full
           insert sequence
          Length = 953

 Score =  204 bits (103), Expect = 7e-50
 Identities = 160/179 (89%)
 Strand = Plus / Plus

                                                                       
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
           ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 441 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 500

                                                                       
Query: 67  tggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgc 126
           ||||| ||    |||||||| ||||| || |||||||||||||||||||||||||| |||
Sbjct: 501 tggtctccatcaacatcccggatccgtgctaagatgctgtactccacctccaaggatcgc 560

                                                                      
Query: 127 atcaagcaagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185
           ||||||||||| || || || ||||||||||||||||||||||| ||||| || |||||
Sbjct: 561 atcaagcaagaacttgatggattccactacgagatccaggcaaccgacccaactgaggt 619



to top

>gb|BT019096.1| Zea mays clone Contig695.F mRNA sequence
          Length = 438

 Score =  180 bits (91), Expect = 1e-42
 Identities = 146/163 (89%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  ttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtccc 73
           |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ttgattttgttactggggaga-tgtgcagaaaagcaagattttcttcattgcctggtccc 59

                                                                       
Query: 74  ctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagc 133
           |    ||||||||||| || || ||||||||||||||||| || ||||||||||||||| 
Sbjct: 60  catcgacatcccgcatacgtgctaagatgctgtactccacgtcaaaggaccgcatcaagt 119

                                                      
Query: 134 aagagctcgacgggttccactacgagatccaggcaactgaccc 176
           | ||||| ||||||||||||||||| |||||||| || |||||
Sbjct: 120 acgagcttgacgggttccactacgaaatccaggcgaccgaccc 162



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 5e-26
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                            
Query: 79       acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 138
                |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 32057237 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32057178

                                                               
Query: 139      ctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185
                || || || ||||||||||||||||||||||| ||||| || |||||
Sbjct: 32057177 cttgatggattccactacgagatccaggcaaccgacccaactgaggt 32057131



 Score =  103 bits (52), Expect = 2e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                            
Query: 7        tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
                ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 32057683 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 32057624

                    
Query: 67       tggt 70
                ||||
Sbjct: 32057623 tggt 32057620



to top

>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
             sequence
          Length = 178158

 Score =  125 bits (63), Expect = 5e-26
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                         
Query: 79    acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 138
             |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 58362 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 58303

                                                            
Query: 139   ctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185
             || || || ||||||||||||||||||||||| ||||| || |||||
Sbjct: 58302 cttgatggattccactacgagatccaggcaaccgacccaactgaggt 58256



 Score =  103 bits (52), Expect = 2e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                         
Query: 7     tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
             ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 58808 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 58749

                 
Query: 67    tggt 70
             ||||
Sbjct: 58748 tggt 58745



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 5e-26
 Identities = 96/107 (89%)
 Strand = Plus / Minus

                                                                            
Query: 79       acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 138
                |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| 
Sbjct: 32147749 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32147690

                                                               
Query: 139      ctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185
                || || || ||||||||||||||||||||||| ||||| || |||||
Sbjct: 32147689 cttgatggattccactacgagatccaggcaaccgacccaactgaggt 32147643



 Score =  103 bits (52), Expect = 2e-19
 Identities = 61/64 (95%)
 Strand = Plus / Minus

                                                                            
Query: 7        tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
                ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||
Sbjct: 32148195 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 32148136

                    
Query: 67       tggt 70
                ||||
Sbjct: 32148135 tggt 32148132



to top

>gb|AY081942.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 2
           (ADF2) mRNA, partial cds
          Length = 523

 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 42/44 (95%)
 Strand = Plus / Plus

                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83
           |||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 235 cagaaaagcaagattttcttcattgcttggtcacctgacacatc 278



to top

>ref|NM_125382.2| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin
           binding AT5G59890 (ADF4) transcript variant AT5G59890.2
           mRNA, complete cds
          Length = 807

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 277 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 336

                 
Query: 65  cctggt 70
           | ||||
Sbjct: 337 catggt 342



to top

>ref|NM_180897.1| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin
           binding AT5G59890 (ADF4) transcript variant AT5G59890.1
           mRNA, complete cds
          Length = 854

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 324 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 383

                 
Query: 65  cctggt 70
           | ||||
Sbjct: 384 catggt 389



to top

>gb|AY090336.1| Arabidopsis thaliana At1g05180/YUP8H12_21 mRNA, complete cds
          Length = 399

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 185 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 244

                 
Query: 65  cctggt 70
           | ||||
Sbjct: 245 catggt 250



to top

>gb|AY050460.1| Arabidopsis thaliana AT5g59890/mmn10_110 mRNA, complete cds
          Length = 734

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 276 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 335

                 
Query: 65  cctggt 70
           | ||||
Sbjct: 336 catggt 341



to top

>gb|AY084757.1| Arabidopsis thaliana clone 11691 mRNA, complete sequence
          Length = 841

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 325 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 384

                 
Query: 65  cctggt 70
           | ||||
Sbjct: 385 catggt 390



to top

>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10
          Length = 84325

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 5     tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
             |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 36758 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 36817

                   
Query: 65    cctggt 70
             | ||||
Sbjct: 36818 catggt 36823



to top

>gb|AF102822.1|AF102822 Arabidopsis thaliana actin depolymerizing factor 4 (ADF4) mRNA,
           complete cds
          Length = 705

 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||||||||| |||||||| ||||  ||||||   ||||| |||||||||||||||||||
Sbjct: 302 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 361

                 
Query: 65  cctggt 70
           | ||||
Sbjct: 362 catggt 367



to top

>gb|AY485790.1| Capsicum annuum actin-depolymerizing factor mRNA, complete cds
          Length = 762

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacac 80
           |||||||||| |||||| |||||||| ||||||||||||||
Sbjct: 310 cagaaaagcaggatttttttcattgcatggtcccctgacac 350



to top

>gb|DQ320313.1| Arachis hypogaea actin depolymerizing factor-like protein mRNA,
           complete cds
          Length = 650

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                    
Query: 43  aaaagcaagattttcttcattgcctggtcccctgacacatc 83
           ||||||| ||||||||||||||| ||||| |||||||||||
Sbjct: 273 aaaagcaggattttcttcattgcttggtctcctgacacatc 313



to top

>gb|BT013009.1| Lycopersicon esculentum clone 114245R, mRNA sequence
          Length = 793

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83
           |||||||||| ||| || |||||||| |||||||||||||||||
Sbjct: 311 cagaaaagcaggatctttttcattgcatggtcccctgacacatc 354



to top

>gb|AY347804.1| Malus x domestica clone 17-6 actin-depolymerizing factor mRNA,
           partial cds
          Length = 281

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83
           |||||||||  ||| ||||||||||||||||| |||||||||||
Sbjct: 175 cagaaaagccggatattcttcattgcctggtctcctgacacatc 218



to top

>gb|AY081941.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 1
           (ADF1) mRNA, complete cds
          Length = 529

 Score = 56.0 bits (28), Expect = 4e-05
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 40  cagaaaagcaagattttcttcattgcctggtc 71
           |||||||||||||||||||||||||| |||||
Sbjct: 251 cagaaaagcaagattttcttcattgcttggtc 282



to top

>gb|AF183903.1|AF183903 Petunia x hybrida actin-depolymerizing factor 1 (ADF1) mRNA,
           complete cds
          Length = 693

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 63/75 (84%)
 Strand = Plus / Plus

                                                                       
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
           ||||||||||| || ||||||| |||||||   ||||| |||| ||| || |||||||| 
Sbjct: 274 tatgattttgatttcgttactgcggagaattgccagaagagcaggatatttttcattgca 333

                          
Query: 67  tggtcccctgacaca 81
           |||| ||||||||||
Sbjct: 334 tggtgccctgacaca 348



to top

>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148,
             complete sequence
          Length = 106000

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                            
Query: 40    cagaaaagcaagattttcttcattgcctggt 70
             |||||||||||||||||||||||||| ||||
Sbjct: 37268 cagaaaagcaagattttcttcattgcatggt 37298



to top

>ref|NM_114469.2| Arabidopsis thaliana ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin
           binding AT3G46000 (ADF2) mRNA, complete cds
          Length = 849

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 433 catggtctccggacac 448



to top

>ref|XM_475079.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 399

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83
           ||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 220 cagaagagcaagatattcttcattgcatggtctcctgatacatc 263



to top

>emb|Z14110.1|LLADF L.longiflorum mRNA for actin depolymerizing factor
          Length = 544

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83
           ||||| |||||||| ||||||||  ||||||| |||||||||||
Sbjct: 253 cagaagagcaagatcttcttcatctcctggtctcctgacacatc 296



to top

>gb|BT000377.1| Arabidopsis thaliana actin depolymerizing factor 2 (At3g46000)
           mRNA, complete cds
          Length = 446

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 200 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 259

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 260 catggtctccggacac 275



to top

>emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing factor
          Length = 589

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99
           ||||| |||||||| |||||| |  ||||||||||||||||  | |||| | |   ||||
Sbjct: 323 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 382

                                   
Query: 100 atgctgtactccacctccaaggac 123
           ||||||||| ||| ||||||||||
Sbjct: 383 atgctgtacgccagctccaaggac 406



to top

>emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing factor
          Length = 546

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99
           ||||| |||||||| |||||| |  ||||||||||||| ||  | |||| |||   ||||
Sbjct: 260 cagaagagcaagatcttcttcttctcctggtcccctgatactgcacgcacccggagcaag 319

                                   
Query: 100 atgctgtactccacctccaaggac 123
           ||||||||| ||| ||||||||||
Sbjct: 320 atgctgtacgccagctccaaggac 343



to top

>gb|AF440310.1| Vitis vinifera actin depolymerizing factor (ADF) mRNA, complete cds
          Length = 665

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgaca 79
           ||||| |||||||| ||||||||||| ||||| |||||||
Sbjct: 270 cagaagagcaagatattcttcattgcatggtctcctgaca 309



to top

>gb|AY064660.1| Arabidopsis thaliana actin depolymerizing factor 2 (ADF2)
           (At3g46000; F16L2_210) mRNA, complete cds
          Length = 446

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 200 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 259

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 260 catggtctccggacac 275



to top

>gb|AF386925.1|AF386925 Arabidopsis thaliana actin depolymerizing factor 2 (F16L2_210)
           mRNA, complete cds
          Length = 805

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 433 catggtctccggacac 448



to top

>gb|AF370482.1|AF370482 Arabidopsis thaliana actin depolymerizing factor 2; ADF2
           (F16L2_210) mRNA, complete cds
          Length = 832

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 433 catggtctccggacac 448



to top

>emb|BX823115.1|CNS0A784 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB90ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 757

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 297 tttacgatttcgactttgtaactgcggagaactgccagaagagcaagatcttcttcattg 356

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 357 catggtctccggacac 372



to top

>dbj|AK102177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086L12, full
            insert sequence
          Length = 2402

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 40   cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83
            ||||| |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 2040 cagaagagcaagatattcttcattgcatggtctcctgatacatc 2083



to top

>gb|AY104025.1| Zea mays PCO095832 mRNA sequence
          Length = 894

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 69/84 (82%)
 Strand = Plus / Plus

                                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99
           ||||| |||||||| |||||| |  ||||||||||||||||  | |||| | |   ||||
Sbjct: 309 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 368

                                   
Query: 100 atgctgtactccacctccaaggac 123
           ||||||||| ||| ||||||||||
Sbjct: 369 atgctgtacgccagctccaaggac 392



to top

>gb|DQ306754.1| Hevea brasiliensis isolate SSH25 mRNA sequence
          Length = 670

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 54/64 (84%)
 Strand = Plus / Minus

                                                                       
Query: 40  cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99
           ||||| |||||||| ||||||||| | ||||| |||   ||||| || ||||||||||||
Sbjct: 355 cagaagagcaagatcttcttcattccatggtctccttcaacatctcgaatccgagccaag 296

               
Query: 100 atgc 103
           ||||
Sbjct: 295 atgc 292



to top

>gb|U48939.1|ATU48939 Arabidopsis thaliana actin depolymerizing factor 2 (AtADF2) mRNA,
           complete cds
          Length = 808

 Score = 48.1 bits (24), Expect = 0.010
 Identities = 63/76 (82%)
 Strand = Plus / Plus

                                                                       
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
           |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 332 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 391

                           
Query: 65  cctggtcccctgacac 80
           | ||||| || |||||
Sbjct: 392 catggtctccggacac 407



to top

>ref|NM_114470.1| Arabidopsis thaliana ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) AT3G46010
           (ADF1) mRNA, complete cds
          Length = 835

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
           |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 348 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 405



to top

>gb|AY062940.1| Arabidopsis thaliana putative actin depolymerizing factor 1
           (At3g46010) mRNA, complete cds
          Length = 451

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
           |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 206 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 263



to top

>gb|AY035154.1| Arabidopsis thaliana putative actin depolymerizing factor ADF1
           (At3g46010) mRNA, complete cds
          Length = 811

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
           |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 344 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 401



to top

>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2
          Length = 111338

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 5      tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
              |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 106362 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 106305



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                          
Query: 5      tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64
              |||| ||||| |||||||| |||| ||||||    ||||| |||||||| ||||||||||
Sbjct: 104403 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 104344

                    
Query: 65     cctggt 70
              | ||||
Sbjct: 104343 catggt 104338



to top

>emb|BX826248.1|CNS0A69V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL94ZC11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 688

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
           |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 333 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 390



to top

>gb|AY085853.1| Arabidopsis thaliana clone 1907 mRNA, complete sequence
          Length = 831

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
           |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 344 tttacgattttgactttgtcactgctgagaattgccagaagagcaagatcttcttcat 401



to top

>gb|AF102173.1|AF102173 Arabidopsis thaliana actin depolymerizing factor 1 (ADF1) gene,
            complete cds
          Length = 5543

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                      
Query: 5    tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
            |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 4712 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 4769



to top

>gb|U48938.1|ATU48938 Arabidopsis thaliana actin depolymerizing factor 1 (AtADF1) mRNA,
           complete cds
          Length = 670

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 5   tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62
           |||| |||||||||||||| ||||  ||||||   ||||| |||||||| ||||||||
Sbjct: 328 tttacgattttgactttgtcactgctgagaattgccagaagagcaagatcttcttcat 385



to top

>gb|AF183904.1|AF183904 Petunia x hybrida actin-depolymerizing factor 2 (ADF2) mRNA,
           complete cds
          Length = 848

 Score = 42.1 bits (21), Expect = 0.62
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 52  attttcttcattgcctggtcccctgacac 80
           |||||||||||||| ||||| ||||||||
Sbjct: 322 attttcttcattgcttggtctcctgacac 350



to top

>gb|BT016543.1| Zea mays clone Contig376 mRNA sequence
          Length = 881

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttct 58
           |||||||| |||||||||||||  ||| |||| ||||| |||| ||| ||||
Sbjct: 378 tatgatttcgactttgttactgcagaggatgtccagaagagcaggatcttct 429



to top

>gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete sequence
          Length = 172417

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 21     tgttactggggagaatgtgcagaaaagcaaga 52
              |||||||||| | ||| |||||||||||||||
Sbjct: 159071 tgttactgggaacaatttgcagaaaagcaaga 159040



to top

>gb|AY428595.1| Helianthus annuus clone HA10-7 putative actin-depolymerizing factor
           2 mRNA, complete cds
          Length = 670

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 46  agcaagattttcttcattgcctggtcccctga 77
           |||| ||||||||||||||| ||||| |||||
Sbjct: 320 agcaggattttcttcattgcatggtctcctga 351



to top

>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence
          Length = 165927

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    tactggggagaatgtgcagaaaag 47
             |||||||||||||||| |||||||
Sbjct: 60500 tactggggagaatgtggagaaaag 60477



to top

>emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing factor
          Length = 801

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttct 58
           |||||||| |||||||||||||  ||| |||| ||||| |||| ||| ||||
Sbjct: 352 tatgatttcgactttgttactgcagaggatgtccagaagagcaggatcttct 403



to top

>gb|AY038063.1| Petunia x hybrida actin-depolymerizing factor 1 gene, complete cds
          Length = 5554

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                        
Query: 7    tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66
            ||||||||||| || ||||||| |||||||   ||||| |||| ||| || |||||||| 
Sbjct: 4324 tatgattttgatttcgttactgcggagaattgccagaagagcaggatatttttcattgca 4383

                
Query: 67   tggt 70
            ||||
Sbjct: 4384 tggt 4387



to top

>gb|DQ088156.1| Gossypium hirsutum actin depolymerizing factor (ADF1) mRNA,
           complete cds
          Length = 963

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 52  attttcttcattgcctggtcccctgacacatc 83
           ||||| |||||||||||||| ||||| |||||
Sbjct: 424 atttttttcattgcctggtctcctgatacatc 455



to top

>gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 165544

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    ttttcttcattgcctggtcccctg 76
             ||||||||||||||||||| ||||
Sbjct: 51344 ttttcttcattgcctggtctcctg 51321



to top

>gb|AY103749.1| Zea mays PCO115125 mRNA sequence
          Length = 965

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 44/52 (84%)
 Strand = Plus / Plus

                                                               
Query: 7   tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttct 58
           |||||||| |||||||||||||  ||| |||| ||||| |||| ||| ||||
Sbjct: 401 tatgatttcgactttgttactgcagaggatgtccagaagagcaggatcttct 452



to top

>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 21     tgttactggggagaatgtgcagaaaagcaaga 52
              |||||||||| | ||| |||||||||||||||
Sbjct: 159071 tgttactgggaacaatttgcagaaaagcaaga 159040



to top

>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 171887

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    ccctgacacatcccgcatcc 91
             ||||||||||||||||||||
Sbjct: 49209 ccctgacacatcccgcatcc 49190



to top

>ref|XM_518531.1| PREDICTED: Pan troglodytes phosphoglycerate kinase 2 (LOC462757),
            mRNA
          Length = 1392

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 14   ttgactttgttactgggga 32
            |||||||||||||||||||
Sbjct: 989  ttgactttgttactgggga 1007



to top

>ref|NM_197397.1| Oryza sativa (japonica cultivar-group) putative actin
           depolymerizing factor (OSJNBb0018B10.29), mRNA
          Length = 462

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 82  tcccgcatccgagccaaga 100
           |||||||||||||||||||
Sbjct: 319 tcccgcatccgagccaaga 337



to top

>ref|XM_477589.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 441

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 46/55 (83%)
 Strand = Plus / Plus

                                                                  
Query: 46  agcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaaga 100
           |||||||| ||||||||  |||||||||||  |   ||| |||||||||||||||
Sbjct: 262 agcaagatattcttcatctcctggtccccttccctttcctgcatccgagccaaga 316



to top

>gb|AY785359.1| Homo sapiens estrogen receptor 2 (ER beta) (ESR2) gene, complete cds
          Length = 65245

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 49    aagattttcttcattgcct 67
             |||||||||||||||||||
Sbjct: 32458 aagattttcttcattgcct 32476



to top

>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 39      gcagaaaagcaagattttcttca 61
               |||||||||| ||||||||||||
Sbjct: 5704777 gcagaaaagctagattttcttca 5704799



to top

>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome
          Length = 134431

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 140   tcgacgggttccactacga 158
             |||||||||||||||||||
Sbjct: 15625 tcgacgggttccactacga 15607



to top

>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete
             sequence
          Length = 137003

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 39    gcagaaaagcaagattttcttca 61
             |||||||| ||||||||||||||
Sbjct: 36746 gcagaaaaacaagattttcttca 36768



to top

>gb|AC133956.4| Mus musculus BAC clone RP23-347E10 from chromosome 16, complete
             sequence
          Length = 171261

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 33    gaatgtgcagaaaagcaag 51
             |||||||||||||||||||
Sbjct: 46951 gaatgtgcagaaaagcaag 46933



to top

>gb|AC124160.3| Lemur catta clone LB2-260A3, complete sequence
          Length = 160625

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                            
Query: 22    gttactggggagaatgtgcagaaaagcaaga 52
             ||||||||| | ||| |||||||||||||||
Sbjct: 45283 gttactgggaacaatttgcagaaaagcaaga 45253



to top

>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence
          Length = 196646

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 7      tatgattttgactttgtta 25
              |||||||||||||||||||
Sbjct: 131048 tatgattttgactttgtta 131066



to top

>gb|AC124486.4| Mus musculus BAC clone RP23-451E1 from chromosome 12, complete sequence
          Length = 183140

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 5      tttatgattttgactttgt 23
              |||||||||||||||||||
Sbjct: 162348 tttatgattttgactttgt 162330



to top

>gb|AC138605.1| Mus musculus BAC clone RP23-392L23 from chromosome 16, complete
             sequence
          Length = 172684

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    gaatgtgcagaaaagcaag 51
             |||||||||||||||||||
Sbjct: 28259 gaatgtgcagaaaagcaag 28277



to top

>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence
          Length = 206661

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 5    tttatgattttgactttgt 23
            |||||||||||||||||||
Sbjct: 7106 tttatgattttgactttgt 7088



to top

>gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete sequence
          Length = 111276

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aatgtgcagaaaagcaaga 52
             |||||||||||||||||||
Sbjct: 78832 aatgtgcagaaaagcaaga 78850



to top

>gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence
          Length = 120831

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     aaagcaagattttcttcat 62
              |||||||||||||||||||
Sbjct: 120171 aaagcaagattttcttcat 120189



to top

>emb|AL358354.16| Human DNA sequence from clone RP11-522D2 on chromosome 1 Contains the
             5' end of the ACBD6 gene for acyl-Coenzyme A binding
             domain containing 6 and a novel gene (LOC148756), complete
             sequence
          Length = 134060

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 5     tttatgattttgactttgt 23
             |||||||||||||||||||
Sbjct: 62419 tttatgattttgactttgt 62437



to top

>emb|AL158165.15| Human DNA sequence from clone RP11-476E15 on chromosome 10 Contains the
              3' end of the SORBS1 gene for sorbin and SH3 domain
              containing 1 and a novel gene (KIAA0894), complete sequence
          Length = 169358

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 57     cttcattgcctggtcccct 75
              |||||||||||||||||||
Sbjct: 111654 cttcattgcctggtcccct 111636



to top

>emb|AL157878.11| Human DNA sequence from clone RP11-51B13 on chromosome 13q31.1-32.1
             Contains 2 novel genes, complete sequence
          Length = 118873

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    actttgttactggggagaa 35
             |||||||||||||||||||
Sbjct: 78253 actttgttactggggagaa 78271



to top

>gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, complete sequence
          Length = 162384

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                         
Query: 50     agattttcttcattgcctggtcccctg 76
              ||||||| |||| ||||||||||||||
Sbjct: 118959 agattttgttcactgcctggtcccctg 118985



to top

>emb|AL135905.6| Human DNA sequence from clone RP5-1148A21 on chromosome 6 Contains a
             ribosomal protein L7A (RPL7A) pseudogene, the PTP4A1 gene
             for protein tyrosine phosphatase type IVA member 1 and a
             CpG island, complete sequence
          Length = 118439

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 7     tatgattttgactttgtta 25
             |||||||||||||||||||
Sbjct: 64073 tatgattttgactttgtta 64055



to top

>emb|AL022068.2|HS167F1 Human DNA sequence from clone RP1-167F1 on chromosome 6p22.1-22.3
            Contains a keratin 18 (KRT18) (CK18,CYK18) pseudogene and
            a novel gene, complete sequence
          Length = 125055

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 24   tactggggagaatgtgcagaaaa 46
            |||||||||||||||| ||||||
Sbjct: 4388 tactggggagaatgtggagaaaa 4366



to top

>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete
              sequence
          Length = 137366

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     tcccgcatccgagccaaga 100
              |||||||||||||||||||
Sbjct: 135282 tcccgcatccgagccaaga 135300



to top

>dbj|AB223981.1| Aspergillus oryzae cDNA, contig sequence: AoEST0822
          Length = 901

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 177 gaccgaggtggagctcgac 195
           |||||||||||||||||||
Sbjct: 95  gaccgaggtggagctcgac 77



to top

>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003
          Length = 4170692

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 177     gaccgaggtggagctcgac 195
               |||||||||||||||||||
Sbjct: 1143379 gaccgaggtggagctcgac 1143361



to top

>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete
             sequence
          Length = 135789

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    tcccgcatccgagccaaga 100
             |||||||||||||||||||
Sbjct: 99437 tcccgcatccgagccaaga 99419



to top

>gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, complete sequence
          Length = 170020

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     aaaagcaagattttcttca 61
              |||||||||||||||||||
Sbjct: 125307 aaaagcaagattttcttca 125289



to top

>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                             
Query: 22     gttactggggagaatgtgcagaaaagcaaga 52
              ||||||||| | ||| |||||||||||||||
Sbjct: 130506 gttactgggaacaatttgcagaaaagcaaga 130476



to top

>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold
          Length = 584809

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 44     aaagcaagattttcttcat 62
              |||||||||||||||||||
Sbjct: 120171 aaagcaagattttcttcat 120189



to top

>emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 in linkage group 22,
             complete sequence
          Length = 177325

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 36    tgtgcagaaaagcaagatt 54
             |||||||||||||||||||
Sbjct: 53116 tgtgcagaaaagcaagatt 53134



to top

>dbj|AK035774.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630003H18
            product:unclassifiable, full insert sequence
          Length = 2978

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 6    ttatgattttgactttgtt 24
            |||||||||||||||||||
Sbjct: 2105 ttatgattttgactttgtt 2123



to top

>gb|AC021504.5|AC021504 Homo sapiens chromosome 18, clone RP11-164M8, complete sequence
          Length = 177068

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     gctttatgattttgacttt 21
             |||||||||||||||||||
Sbjct: 96127 gctttatgattttgacttt 96145



to top

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 82       tcccgcatccgagccaaga 100
                |||||||||||||||||||
Sbjct: 19642246 tcccgcatccgagccaaga 19642228



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                             
Query: 40     cagaaaagcaagattttcttcattgcctggt 70
              ||||| |||||||| ||||||||||| ||||
Sbjct: 686989 cagaagagcaagatattcttcattgcatggt 687019



to top

>gb|AF215937.1|AF215937 Homo sapiens 3pv2 and 5p152 genes, complete cds, complete sequence
          Length = 143340

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 49    aagattttcttcattgcct 67
             |||||||||||||||||||
Sbjct: 94792 aagattttcttcattgcct 94774



to top

>gb|AC019172.4| Homo sapiens BAC clone RP11-178E6 from 2, complete sequence
          Length = 176983

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     agaatgtgcagaaaagcaa 50
              |||||||||||||||||||
Sbjct: 173790 agaatgtgcagaaaagcaa 173808



to top

>gb|AC108130.3| Homo sapiens chromosome 5 clone RP11-84B12, complete sequence
          Length = 159922

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 31    gagaatgtgcagaaaagcaagat 53
             ||||||||||||||| |||||||
Sbjct: 50649 gagaatgtgcagaaatgcaagat 50671



to top

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 173     acccgaccgaggtggagctcgac 195
               |||||||||||| ||||||||||
Sbjct: 2438098 acccgaccgaggaggagctcgac 2438076



to top

>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 39     gcagaaaagcaagattttcttca 61
              |||||||||| ||||||||||||
Sbjct: 719307 gcagaaaagctagattttcttca 719329



to top

>emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chromosome X, complete
              sequence
          Length = 237321

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 50     agattttcttcattgcctg 68
              |||||||||||||||||||
Sbjct: 183857 agattttcttcattgcctg 183875



to top

>dbj|AK121749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087E18, full
           insert sequence
          Length = 763

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 82  tcccgcatccgagccaaga 100
           |||||||||||||||||||
Sbjct: 354 tcccgcatccgagccaaga 372



to top

>dbj|AK064063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G01, full
           insert sequence
          Length = 744

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 82  tcccgcatccgagccaaga 100
           |||||||||||||||||||
Sbjct: 342 tcccgcatccgagccaaga 360



to top

>gb|AY109054.1| Zea mays PCO116163 mRNA sequence
          Length = 576

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 43/51 (84%)
 Strand = Plus / Plus

                                                              
Query: 96  caagatgctgtactccacctccaaggaccgcatcaagcaagagctcgacgg 146
           ||||||||||||| | | ||||||||||||  |||||   |||||||||||
Sbjct: 421 caagatgctgtacgcaagctccaaggaccggttcaagagggagctcgacgg 471



to top

>gb|AF179295.1|AF179295 Malus domestica putative actin depolymerizing factor (ADF) mRNA,
           complete cds
          Length = 1022

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 48/55 (87%), Gaps = 2/55 (3%)
 Strand = Plus / Plus

                                                                  
Query: 7   tatgattttgactttgttactggggagaa-tgtgcagaaaagcaagattttcttc 60
           ||||||||||||||||| ||||  ||||| ||| || ||||||| ||||||||||
Sbjct: 341 tatgattttgactttgtgactgtagagaactgt-cacaaaagcaggattttcttc 394



to top

>emb|AL161756.6|CNS01RHJ Human chromosome 14 DNA sequence BAC R-712C19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 176257

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 49     aagattttcttcattgcct 67
              |||||||||||||||||||
Sbjct: 112457 aagattttcttcattgcct 112475



to top

>gb|BC085077.1| Xenopus laevis hypothetical LOC495490, mRNA (cDNA clone
            IMAGE:5516313), partial cds
          Length = 1947

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 35   atgtgcagaaaagcaagat 53
            |||||||||||||||||||
Sbjct: 1854 atgtgcagaaaagcaagat 1836



to top

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 82       tcccgcatccgagccaaga 100
                |||||||||||||||||||
Sbjct: 19653522 tcccgcatccgagccaaga 19653504



to top

>emb|AL840623.10| Mouse DNA sequence from clone RP23-289L17 on chromosome 4, complete
              sequence
          Length = 112610

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 6      ttatgattttgactttgtt 24
              |||||||||||||||||||
Sbjct: 100449 ttatgattttgactttgtt 100467



to top

>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0041A22, complete sequence
          Length = 117919

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 40    cagaaaagcaagattttcttcattgcctggt 70
             ||||| |||||||| ||||||||||| ||||
Sbjct: 32188 cagaagagcaagatattcttcattgcatggt 32218



to top

>emb|AL844174.2| Mouse DNA sequence from clone RP23-377G5 on chromosome X, complete
             sequence
          Length = 157074

 Score = 38.2 bits (19), Expect = 9.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 3     gctttatgattttgacttt 21
             |||||||||||||||||||
Sbjct: 59731 gctttatgattttgacttt 59749


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,980,051
Number of Sequences: 3902068
Number of extensions: 1980051
Number of successful extensions: 131256
Number of sequences better than 10.0: 107
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 130775
Number of HSP's gapped (non-prelim): 475
length of query: 196
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 174
effective length of database: 17,147,199,772
effective search space: 2983612760328
effective search space used: 2983612760328
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top