| Clone Name | basd16d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103931.1| Zea mays PCO140521 mRNA sequence Length = 985 Score = 214 bits (108), Expect = 8e-53 Identities = 159/176 (90%) Strand = Plus / Plus Query: 1 gcgctttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttc 60 ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gcgctgtatgattttgattttgttactggggagaatgtgcagaaaagcaagattttcttc 451 Query: 61 attgcctggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaag 120 |||||||||||||| ||||||||||| || || ||||||||||||||||| || ||| Sbjct: 452 attgcctggtccccatcgacatcccgcatacgtgctaagatgctgtactccacgtcgaag 511 Query: 121 gaccgcatcaagcaagagctcgacgggttccactacgagatccaggcaactgaccc 176 |||||||||||| | ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 512 gaccgcatcaagtacgagcttgacgggttccactacgaaatccaggcgaccgaccc 567
>ref|NM_184993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 786 Score = 204 bits (103), Expect = 7e-50 Identities = 160/179 (89%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 271 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 330 Query: 67 tggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgc 126 ||||| || |||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 331 tggtctccatcaacatcccggatccgtgctaagatgctgtactccacctccaaggatcgc 390 Query: 127 atcaagcaagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185 ||||||||||| || || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 391 atcaagcaagaacttgatggattccactacgagatccaggcaaccgacccaactgaggt 449
>dbj|AK073162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024B06, full insert sequence Length = 954 Score = 204 bits (103), Expect = 7e-50 Identities = 160/179 (89%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 439 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 498 Query: 67 tggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgc 126 ||||| || |||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 499 tggtctccatcaacatcccggatccgtgctaagatgctgtactccacctccaaggatcgc 558 Query: 127 atcaagcaagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185 ||||||||||| || || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 559 atcaagcaagaacttgatggattccactacgagatccaggcaaccgacccaactgaggt 617
>dbj|AK061347.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-F01, full insert sequence Length = 953 Score = 204 bits (103), Expect = 7e-50 Identities = 160/179 (89%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 441 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 500 Query: 67 tggtcccctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgc 126 ||||| || |||||||| ||||| || |||||||||||||||||||||||||| ||| Sbjct: 501 tggtctccatcaacatcccggatccgtgctaagatgctgtactccacctccaaggatcgc 560 Query: 127 atcaagcaagagctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185 ||||||||||| || || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 561 atcaagcaagaacttgatggattccactacgagatccaggcaaccgacccaactgaggt 619
>gb|BT019096.1| Zea mays clone Contig695.F mRNA sequence Length = 438 Score = 180 bits (91), Expect = 1e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 14 ttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcctggtccc 73 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttgattttgttactggggaga-tgtgcagaaaagcaagattttcttcattgcctggtccc 59 Query: 74 ctgacacatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagc 133 | ||||||||||| || || ||||||||||||||||| || ||||||||||||||| Sbjct: 60 catcgacatcccgcatacgtgctaagatgctgtactccacgtcaaaggaccgcatcaagt 119 Query: 134 aagagctcgacgggttccactacgagatccaggcaactgaccc 176 | ||||| ||||||||||||||||| |||||||| || ||||| Sbjct: 120 acgagcttgacgggttccactacgaaatccaggcgaccgaccc 162
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 5e-26 Identities = 96/107 (89%) Strand = Plus / Minus Query: 79 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 138 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 32057237 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32057178 Query: 139 ctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185 || || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 32057177 cttgatggattccactacgagatccaggcaaccgacccaactgaggt 32057131 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 32057683 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 32057624 Query: 67 tggt 70 |||| Sbjct: 32057623 tggt 32057620
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete sequence Length = 178158 Score = 125 bits (63), Expect = 5e-26 Identities = 96/107 (89%) Strand = Plus / Minus Query: 79 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 138 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 58362 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 58303 Query: 139 ctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185 || || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 58302 cttgatggattccactacgagatccaggcaaccgacccaactgaggt 58256 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 58808 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 58749 Query: 67 tggt 70 |||| Sbjct: 58748 tggt 58745
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 5e-26 Identities = 96/107 (89%) Strand = Plus / Minus Query: 79 acatcccgcatccgagccaagatgctgtactccacctccaaggaccgcatcaagcaagag 138 |||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| Sbjct: 32147749 acatcccggatccgtgctaagatgctgtactccacctccaaggatcgcatcaagcaagaa 32147690 Query: 139 ctcgacgggttccactacgagatccaggcaactgacccgaccgaggt 185 || || || ||||||||||||||||||||||| ||||| || ||||| Sbjct: 32147689 cttgatggattccactacgagatccaggcaaccgacccaactgaggt 32147643 Score = 103 bits (52), Expect = 2e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct: 32148195 tatgattttgactttgttactggggagaatgtgcaaaagagcaagattttcttcatcgcc 32148136 Query: 67 tggt 70 |||| Sbjct: 32148135 tggt 32148132
>gb|AY081942.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 2 (ADF2) mRNA, partial cds Length = 523 Score = 71.9 bits (36), Expect = 7e-10 Identities = 42/44 (95%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83 |||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 235 cagaaaagcaagattttcttcattgcttggtcacctgacacatc 278
>ref|NM_125382.2| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding AT5G59890 (ADF4) transcript variant AT5G59890.2 mRNA, complete cds Length = 807 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 277 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 336 Query: 65 cctggt 70 | |||| Sbjct: 337 catggt 342
>ref|NM_180897.1| Arabidopsis thaliana ADF4 (ACTIN DEPOLYMERIZING FACTOR 4); actin binding AT5G59890 (ADF4) transcript variant AT5G59890.1 mRNA, complete cds Length = 854 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 324 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 383 Query: 65 cctggt 70 | |||| Sbjct: 384 catggt 389
>gb|AY090336.1| Arabidopsis thaliana At1g05180/YUP8H12_21 mRNA, complete cds Length = 399 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 185 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 244 Query: 65 cctggt 70 | |||| Sbjct: 245 catggt 250
>gb|AY050460.1| Arabidopsis thaliana AT5g59890/mmn10_110 mRNA, complete cds Length = 734 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 276 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 335 Query: 65 cctggt 70 | |||| Sbjct: 336 catggt 341
>gb|AY084757.1| Arabidopsis thaliana clone 11691 mRNA, complete sequence Length = 841 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 325 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 384 Query: 65 cctggt 70 | |||| Sbjct: 385 catggt 390
>dbj|AB015475.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMN10 Length = 84325 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 36758 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 36817 Query: 65 cctggt 70 | |||| Sbjct: 36818 catggt 36823
>gb|AF102822.1|AF102822 Arabidopsis thaliana actin depolymerizing factor 4 (ADF4) mRNA, complete cds Length = 705 Score = 60.0 bits (30), Expect = 3e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||||||||| |||||||| |||| |||||| ||||| ||||||||||||||||||| Sbjct: 302 tttatgatttcgactttgtcactgcagagaattgccagaagagcaagattttcttcattg 361 Query: 65 cctggt 70 | |||| Sbjct: 362 catggt 367
>gb|AY485790.1| Capsicum annuum actin-depolymerizing factor mRNA, complete cds Length = 762 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacac 80 |||||||||| |||||| |||||||| |||||||||||||| Sbjct: 310 cagaaaagcaggatttttttcattgcatggtcccctgacac 350
>gb|DQ320313.1| Arachis hypogaea actin depolymerizing factor-like protein mRNA, complete cds Length = 650 Score = 58.0 bits (29), Expect = 1e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 43 aaaagcaagattttcttcattgcctggtcccctgacacatc 83 ||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 273 aaaagcaggattttcttcattgcttggtctcctgacacatc 313
>gb|BT013009.1| Lycopersicon esculentum clone 114245R, mRNA sequence Length = 793 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83 |||||||||| ||| || |||||||| ||||||||||||||||| Sbjct: 311 cagaaaagcaggatctttttcattgcatggtcccctgacacatc 354
>gb|AY347804.1| Malus x domestica clone 17-6 actin-depolymerizing factor mRNA, partial cds Length = 281 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83 ||||||||| ||| ||||||||||||||||| ||||||||||| Sbjct: 175 cagaaaagccggatattcttcattgcctggtctcctgacacatc 218
>gb|AY081941.1| Nicotiana tabacum pollen specific actin-depolymerizing factor 1 (ADF1) mRNA, complete cds Length = 529 Score = 56.0 bits (28), Expect = 4e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtc 71 |||||||||||||||||||||||||| ||||| Sbjct: 251 cagaaaagcaagattttcttcattgcttggtc 282
>gb|AF183903.1|AF183903 Petunia x hybrida actin-depolymerizing factor 1 (ADF1) mRNA, complete cds Length = 693 Score = 54.0 bits (27), Expect = 2e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||| || ||||||| ||||||| ||||| |||| ||| || |||||||| Sbjct: 274 tatgattttgatttcgttactgcggagaattgccagaagagcaggatatttttcattgca 333 Query: 67 tggtcccctgacaca 81 |||| |||||||||| Sbjct: 334 tggtgccctgacaca 348
>dbj|AP004970.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT30P03, TM0148, complete sequence Length = 106000 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggt 70 |||||||||||||||||||||||||| |||| Sbjct: 37268 cagaaaagcaagattttcttcattgcatggt 37298
>ref|NM_114469.2| Arabidopsis thaliana ADF2 (ACTIN DEPOLYMERIZING FACTOR 2); actin binding AT3G46000 (ADF2) mRNA, complete cds Length = 849 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 433 catggtctccggacac 448
>ref|XM_475079.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 399 Score = 48.1 bits (24), Expect = 0.010 Identities = 39/44 (88%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 220 cagaagagcaagatattcttcattgcatggtctcctgatacatc 263
>emb|Z14110.1|LLADF L.longiflorum mRNA for actin depolymerizing factor Length = 544 Score = 48.1 bits (24), Expect = 0.010 Identities = 39/44 (88%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83 ||||| |||||||| |||||||| ||||||| ||||||||||| Sbjct: 253 cagaagagcaagatcttcttcatctcctggtctcctgacacatc 296
>gb|BT000377.1| Arabidopsis thaliana actin depolymerizing factor 2 (At3g46000) mRNA, complete cds Length = 446 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 200 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 259 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 260 catggtctccggacac 275
>emb|X80820.1|ZMABP1F Z.mays ABP1 mRNA for actin-depolymerizing factor Length = 589 Score = 48.1 bits (24), Expect = 0.010 Identities = 69/84 (82%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99 ||||| |||||||| |||||| | |||||||||||||||| | |||| | | |||| Sbjct: 323 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 382 Query: 100 atgctgtactccacctccaaggac 123 ||||||||| ||| |||||||||| Sbjct: 383 atgctgtacgccagctccaaggac 406
>emb|X97725.1|ZMABP2 Z.mays ZmABP2 mRNA for actin depolymerizing factor Length = 546 Score = 48.1 bits (24), Expect = 0.010 Identities = 69/84 (82%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99 ||||| |||||||| |||||| | ||||||||||||| || | |||| ||| |||| Sbjct: 260 cagaagagcaagatcttcttcttctcctggtcccctgatactgcacgcacccggagcaag 319 Query: 100 atgctgtactccacctccaaggac 123 ||||||||| ||| |||||||||| Sbjct: 320 atgctgtacgccagctccaaggac 343
>gb|AF440310.1| Vitis vinifera actin depolymerizing factor (ADF) mRNA, complete cds Length = 665 Score = 48.1 bits (24), Expect = 0.010 Identities = 36/40 (90%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgaca 79 ||||| |||||||| ||||||||||| ||||| ||||||| Sbjct: 270 cagaagagcaagatattcttcattgcatggtctcctgaca 309
>gb|AY064660.1| Arabidopsis thaliana actin depolymerizing factor 2 (ADF2) (At3g46000; F16L2_210) mRNA, complete cds Length = 446 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 200 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 259 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 260 catggtctccggacac 275
>gb|AF386925.1|AF386925 Arabidopsis thaliana actin depolymerizing factor 2 (F16L2_210) mRNA, complete cds Length = 805 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 433 catggtctccggacac 448
>gb|AF370482.1|AF370482 Arabidopsis thaliana actin depolymerizing factor 2; ADF2 (F16L2_210) mRNA, complete cds Length = 832 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 373 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 432 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 433 catggtctccggacac 448
>emb|BX823115.1|CNS0A784 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB90ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 757 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 297 tttacgatttcgactttgtaactgcggagaactgccagaagagcaagatcttcttcattg 356 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 357 catggtctccggacac 372
>dbj|AK102177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086L12, full insert sequence Length = 2402 Score = 48.1 bits (24), Expect = 0.010 Identities = 39/44 (88%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatc 83 ||||| |||||||| ||||||||||| ||||| ||||| ||||| Sbjct: 2040 cagaagagcaagatattcttcattgcatggtctcctgatacatc 2083
>gb|AY104025.1| Zea mays PCO095832 mRNA sequence Length = 894 Score = 48.1 bits (24), Expect = 0.010 Identities = 69/84 (82%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99 ||||| |||||||| |||||| | |||||||||||||||| | |||| | | |||| Sbjct: 309 cagaagagcaagatcttcttcttctcctggtcccctgacactgcacgcaccaggagcaag 368 Query: 100 atgctgtactccacctccaaggac 123 ||||||||| ||| |||||||||| Sbjct: 369 atgctgtacgccagctccaaggac 392
>gb|DQ306754.1| Hevea brasiliensis isolate SSH25 mRNA sequence Length = 670 Score = 48.1 bits (24), Expect = 0.010 Identities = 54/64 (84%) Strand = Plus / Minus Query: 40 cagaaaagcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaag 99 ||||| |||||||| ||||||||| | ||||| ||| ||||| || |||||||||||| Sbjct: 355 cagaagagcaagatcttcttcattccatggtctccttcaacatctcgaatccgagccaag 296 Query: 100 atgc 103 |||| Sbjct: 295 atgc 292
>gb|U48939.1|ATU48939 Arabidopsis thaliana actin depolymerizing factor 2 (AtADF2) mRNA, complete cds Length = 808 Score = 48.1 bits (24), Expect = 0.010 Identities = 63/76 (82%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 332 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 391 Query: 65 cctggtcccctgacac 80 | ||||| || ||||| Sbjct: 392 catggtctccggacac 407
>ref|NM_114470.1| Arabidopsis thaliana ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) AT3G46010 (ADF1) mRNA, complete cds Length = 835 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 348 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 405
>gb|AY062940.1| Arabidopsis thaliana putative actin depolymerizing factor 1 (At3g46010) mRNA, complete cds Length = 451 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 206 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 263
>gb|AY035154.1| Arabidopsis thaliana putative actin depolymerizing factor ADF1 (At3g46010) mRNA, complete cds Length = 811 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 344 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 401
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Minus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 106362 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 106305 Score = 44.1 bits (22), Expect = 0.16 Identities = 55/66 (83%) Strand = Plus / Minus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattg 64 |||| ||||| |||||||| |||| |||||| ||||| |||||||| |||||||||| Sbjct: 104403 tttacgatttcgactttgtcactgcggagaactgccagaagagcaagatcttcttcattg 104344 Query: 65 cctggt 70 | |||| Sbjct: 104343 catggt 104338
>emb|BX826248.1|CNS0A69V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL94ZC11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 333 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 390
>gb|AY085853.1| Arabidopsis thaliana clone 1907 mRNA, complete sequence Length = 831 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 344 tttacgattttgactttgtcactgctgagaattgccagaagagcaagatcttcttcat 401
>gb|AF102173.1|AF102173 Arabidopsis thaliana actin depolymerizing factor 1 (ADF1) gene, complete cds Length = 5543 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 4712 tttacgattttgactttgtaactgctgagaattgccagaagagcaagatcttcttcat 4769
>gb|U48938.1|ATU48938 Arabidopsis thaliana actin depolymerizing factor 1 (AtADF1) mRNA, complete cds Length = 670 Score = 44.1 bits (22), Expect = 0.16 Identities = 49/58 (84%) Strand = Plus / Plus Query: 5 tttatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcat 62 |||| |||||||||||||| |||| |||||| ||||| |||||||| |||||||| Sbjct: 328 tttacgattttgactttgtcactgctgagaattgccagaagagcaagatcttcttcat 385
>gb|AF183904.1|AF183904 Petunia x hybrida actin-depolymerizing factor 2 (ADF2) mRNA, complete cds Length = 848 Score = 42.1 bits (21), Expect = 0.62 Identities = 27/29 (93%) Strand = Plus / Plus Query: 52 attttcttcattgcctggtcccctgacac 80 |||||||||||||| ||||| |||||||| Sbjct: 322 attttcttcattgcttggtctcctgacac 350
>gb|BT016543.1| Zea mays clone Contig376 mRNA sequence Length = 881 Score = 40.1 bits (20), Expect = 2.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttct 58 |||||||| ||||||||||||| ||| |||| ||||| |||| ||| |||| Sbjct: 378 tatgatttcgactttgttactgcagaggatgtccagaagagcaggatcttct 429
>gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete sequence Length = 172417 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 21 tgttactggggagaatgtgcagaaaagcaaga 52 |||||||||| | ||| ||||||||||||||| Sbjct: 159071 tgttactgggaacaatttgcagaaaagcaaga 159040
>gb|AY428595.1| Helianthus annuus clone HA10-7 putative actin-depolymerizing factor 2 mRNA, complete cds Length = 670 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 46 agcaagattttcttcattgcctggtcccctga 77 |||| ||||||||||||||| ||||| ||||| Sbjct: 320 agcaggattttcttcattgcatggtctcctga 351
>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence Length = 165927 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 tactggggagaatgtgcagaaaag 47 |||||||||||||||| ||||||| Sbjct: 60500 tactggggagaatgtggagaaaag 60477
>emb|X97726.1|ZMABP3 Z.mays ZmABP3 mRNA for actin depolymerizing factor Length = 801 Score = 40.1 bits (20), Expect = 2.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttct 58 |||||||| ||||||||||||| ||| |||| ||||| |||| ||| |||| Sbjct: 352 tatgatttcgactttgttactgcagaggatgtccagaagagcaggatcttct 403
>gb|AY038063.1| Petunia x hybrida actin-depolymerizing factor 1 gene, complete cds Length = 5554 Score = 40.1 bits (20), Expect = 2.5 Identities = 53/64 (82%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttcttcattgcc 66 ||||||||||| || ||||||| ||||||| ||||| |||| ||| || |||||||| Sbjct: 4324 tatgattttgatttcgttactgcggagaattgccagaagagcaggatatttttcattgca 4383 Query: 67 tggt 70 |||| Sbjct: 4384 tggt 4387
>gb|DQ088156.1| Gossypium hirsutum actin depolymerizing factor (ADF1) mRNA, complete cds Length = 963 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 52 attttcttcattgcctggtcccctgacacatc 83 ||||| |||||||||||||| ||||| ||||| Sbjct: 424 atttttttcattgcctggtctcctgatacatc 455
>gb|AC048346.13| Homo sapiens 3 BAC RP11-13L2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165544 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 53 ttttcttcattgcctggtcccctg 76 ||||||||||||||||||| |||| Sbjct: 51344 ttttcttcattgcctggtctcctg 51321
>gb|AY103749.1| Zea mays PCO115125 mRNA sequence Length = 965 Score = 40.1 bits (20), Expect = 2.5 Identities = 44/52 (84%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaatgtgcagaaaagcaagattttct 58 |||||||| ||||||||||||| ||| |||| ||||| |||| ||| |||| Sbjct: 401 tatgatttcgactttgttactgcagaggatgtccagaagagcaggatcttct 452
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold Length = 1595145 Score = 40.1 bits (20), Expect = 2.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 21 tgttactggggagaatgtgcagaaaagcaaga 52 |||||||||| | ||| ||||||||||||||| Sbjct: 159071 tgttactgggaacaatttgcagaaaagcaaga 159040
>gb|AC024092.19| Homo sapiens 12p BAC RP11-712A21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171887 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 ccctgacacatcccgcatcc 91 |||||||||||||||||||| Sbjct: 49209 ccctgacacatcccgcatcc 49190
>ref|XM_518531.1| PREDICTED: Pan troglodytes phosphoglycerate kinase 2 (LOC462757), mRNA Length = 1392 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 ttgactttgttactgggga 32 ||||||||||||||||||| Sbjct: 989 ttgactttgttactgggga 1007
>ref|NM_197397.1| Oryza sativa (japonica cultivar-group) putative actin depolymerizing factor (OSJNBb0018B10.29), mRNA Length = 462 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 319 tcccgcatccgagccaaga 337
>ref|XM_477589.1| Oryza sativa (japonica cultivar-group), mRNA Length = 441 Score = 38.2 bits (19), Expect = 9.7 Identities = 46/55 (83%) Strand = Plus / Plus Query: 46 agcaagattttcttcattgcctggtcccctgacacatcccgcatccgagccaaga 100 |||||||| |||||||| ||||||||||| | ||| ||||||||||||||| Sbjct: 262 agcaagatattcttcatctcctggtccccttccctttcctgcatccgagccaaga 316
>gb|AY785359.1| Homo sapiens estrogen receptor 2 (ER beta) (ESR2) gene, complete cds Length = 65245 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 aagattttcttcattgcct 67 ||||||||||||||||||| Sbjct: 32458 aagattttcttcattgcct 32476
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 39 gcagaaaagcaagattttcttca 61 |||||||||| |||||||||||| Sbjct: 5704777 gcagaaaagctagattttcttca 5704799
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 140 tcgacgggttccactacga 158 ||||||||||||||||||| Sbjct: 15625 tcgacgggttccactacga 15607
>gb|AC145474.2| Rattus norvegicus chromosome 1 clone RP32-113N8 map q32, complete sequence Length = 137003 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 39 gcagaaaagcaagattttcttca 61 |||||||| |||||||||||||| Sbjct: 36746 gcagaaaaacaagattttcttca 36768
>gb|AC133956.4| Mus musculus BAC clone RP23-347E10 from chromosome 16, complete sequence Length = 171261 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 33 gaatgtgcagaaaagcaag 51 ||||||||||||||||||| Sbjct: 46951 gaatgtgcagaaaagcaag 46933
>gb|AC124160.3| Lemur catta clone LB2-260A3, complete sequence Length = 160625 Score = 38.2 bits (19), Expect = 9.7 Identities = 28/31 (90%) Strand = Plus / Minus Query: 22 gttactggggagaatgtgcagaaaagcaaga 52 ||||||||| | ||| ||||||||||||||| Sbjct: 45283 gttactgggaacaatttgcagaaaagcaaga 45253
>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence Length = 196646 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 7 tatgattttgactttgtta 25 ||||||||||||||||||| Sbjct: 131048 tatgattttgactttgtta 131066
>gb|AC124486.4| Mus musculus BAC clone RP23-451E1 from chromosome 12, complete sequence Length = 183140 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tttatgattttgactttgt 23 ||||||||||||||||||| Sbjct: 162348 tttatgattttgactttgt 162330
>gb|AC138605.1| Mus musculus BAC clone RP23-392L23 from chromosome 16, complete sequence Length = 172684 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 33 gaatgtgcagaaaagcaag 51 ||||||||||||||||||| Sbjct: 28259 gaatgtgcagaaaagcaag 28277
>gb|AC123957.4| Mus musculus BAC clone RP23-302N2 from 12, complete sequence Length = 206661 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 5 tttatgattttgactttgt 23 ||||||||||||||||||| Sbjct: 7106 tttatgattttgactttgt 7088
>gb|AC151914.19| Medicago truncatula clone mth2-29f16, complete sequence Length = 111276 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 34 aatgtgcagaaaagcaaga 52 ||||||||||||||||||| Sbjct: 78832 aatgtgcagaaaagcaaga 78850
>gb|AC137644.3| Artibeus jamaicensis clone 25B10, complete sequence Length = 120831 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 aaagcaagattttcttcat 62 ||||||||||||||||||| Sbjct: 120171 aaagcaagattttcttcat 120189
>emb|AL358354.16| Human DNA sequence from clone RP11-522D2 on chromosome 1 Contains the 5' end of the ACBD6 gene for acyl-Coenzyme A binding domain containing 6 and a novel gene (LOC148756), complete sequence Length = 134060 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 tttatgattttgactttgt 23 ||||||||||||||||||| Sbjct: 62419 tttatgattttgactttgt 62437
>emb|AL158165.15| Human DNA sequence from clone RP11-476E15 on chromosome 10 Contains the 3' end of the SORBS1 gene for sorbin and SH3 domain containing 1 and a novel gene (KIAA0894), complete sequence Length = 169358 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 cttcattgcctggtcccct 75 ||||||||||||||||||| Sbjct: 111654 cttcattgcctggtcccct 111636
>emb|AL157878.11| Human DNA sequence from clone RP11-51B13 on chromosome 13q31.1-32.1 Contains 2 novel genes, complete sequence Length = 118873 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 actttgttactggggagaa 35 ||||||||||||||||||| Sbjct: 78253 actttgttactggggagaa 78271
>gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, complete sequence Length = 162384 Score = 38.2 bits (19), Expect = 9.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 50 agattttcttcattgcctggtcccctg 76 ||||||| |||| |||||||||||||| Sbjct: 118959 agattttgttcactgcctggtcccctg 118985
>emb|AL135905.6| Human DNA sequence from clone RP5-1148A21 on chromosome 6 Contains a ribosomal protein L7A (RPL7A) pseudogene, the PTP4A1 gene for protein tyrosine phosphatase type IVA member 1 and a CpG island, complete sequence Length = 118439 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 7 tatgattttgactttgtta 25 ||||||||||||||||||| Sbjct: 64073 tatgattttgactttgtta 64055
>emb|AL022068.2|HS167F1 Human DNA sequence from clone RP1-167F1 on chromosome 6p22.1-22.3 Contains a keratin 18 (KRT18) (CK18,CYK18) pseudogene and a novel gene, complete sequence Length = 125055 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 24 tactggggagaatgtgcagaaaa 46 |||||||||||||||| |||||| Sbjct: 4388 tactggggagaatgtggagaaaa 4366
>gb|AC079029.11| Oryza sativa chromosome 10 BAC OSJNBb0028C01 genomic sequence, complete sequence Length = 137366 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 135282 tcccgcatccgagccaaga 135300
>dbj|AB223981.1| Aspergillus oryzae cDNA, contig sequence: AoEST0822 Length = 901 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 gaccgaggtggagctcgac 195 ||||||||||||||||||| Sbjct: 95 gaccgaggtggagctcgac 77
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 177 gaccgaggtggagctcgac 195 ||||||||||||||||||| Sbjct: 1143379 gaccgaggtggagctcgac 1143361
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 99437 tcccgcatccgagccaaga 99419
>gb|AC012309.8| Homo sapiens chromosome 19 clone CTC-454I21, complete sequence Length = 170020 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 aaaagcaagattttcttca 61 ||||||||||||||||||| Sbjct: 125307 aaaagcaagattttcttca 125289
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 38.2 bits (19), Expect = 9.7 Identities = 28/31 (90%) Strand = Plus / Minus Query: 22 gttactggggagaatgtgcagaaaagcaaga 52 ||||||||| | ||| ||||||||||||||| Sbjct: 130506 gttactgggaacaatttgcagaaaagcaaga 130476
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 aaagcaagattttcttcat 62 ||||||||||||||||||| Sbjct: 120171 aaagcaagattttcttcat 120189
>emb|BX649643.10| Zebrafish DNA sequence from clone CH211-125M10 in linkage group 22, complete sequence Length = 177325 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 36 tgtgcagaaaagcaagatt 54 ||||||||||||||||||| Sbjct: 53116 tgtgcagaaaagcaagatt 53134
>dbj|AK035774.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630003H18 product:unclassifiable, full insert sequence Length = 2978 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgattttgactttgtt 24 ||||||||||||||||||| Sbjct: 2105 ttatgattttgactttgtt 2123
>gb|AC021504.5|AC021504 Homo sapiens chromosome 18, clone RP11-164M8, complete sequence Length = 177068 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gctttatgattttgacttt 21 ||||||||||||||||||| Sbjct: 96127 gctttatgattttgacttt 96145
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 19642246 tcccgcatccgagccaaga 19642228
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 9.7 Identities = 28/31 (90%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggt 70 ||||| |||||||| ||||||||||| |||| Sbjct: 686989 cagaagagcaagatattcttcattgcatggt 687019
>gb|AF215937.1|AF215937 Homo sapiens 3pv2 and 5p152 genes, complete cds, complete sequence Length = 143340 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 aagattttcttcattgcct 67 ||||||||||||||||||| Sbjct: 94792 aagattttcttcattgcct 94774
>gb|AC019172.4| Homo sapiens BAC clone RP11-178E6 from 2, complete sequence Length = 176983 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 agaatgtgcagaaaagcaa 50 ||||||||||||||||||| Sbjct: 173790 agaatgtgcagaaaagcaa 173808
>gb|AC108130.3| Homo sapiens chromosome 5 clone RP11-84B12, complete sequence Length = 159922 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 31 gagaatgtgcagaaaagcaagat 53 ||||||||||||||| ||||||| Sbjct: 50649 gagaatgtgcagaaatgcaagat 50671
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 173 acccgaccgaggtggagctcgac 195 |||||||||||| |||||||||| Sbjct: 2438098 acccgaccgaggaggagctcgac 2438076
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 38.2 bits (19), Expect = 9.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 39 gcagaaaagcaagattttcttca 61 |||||||||| |||||||||||| Sbjct: 719307 gcagaaaagctagattttcttca 719329
>emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chromosome X, complete sequence Length = 237321 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 50 agattttcttcattgcctg 68 ||||||||||||||||||| Sbjct: 183857 agattttcttcattgcctg 183875
>dbj|AK121749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087E18, full insert sequence Length = 763 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 354 tcccgcatccgagccaaga 372
>dbj|AK064063.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-G01, full insert sequence Length = 744 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 342 tcccgcatccgagccaaga 360
>gb|AY109054.1| Zea mays PCO116163 mRNA sequence Length = 576 Score = 38.2 bits (19), Expect = 9.7 Identities = 43/51 (84%) Strand = Plus / Plus Query: 96 caagatgctgtactccacctccaaggaccgcatcaagcaagagctcgacgg 146 ||||||||||||| | | |||||||||||| ||||| ||||||||||| Sbjct: 421 caagatgctgtacgcaagctccaaggaccggttcaagagggagctcgacgg 471
>gb|AF179295.1|AF179295 Malus domestica putative actin depolymerizing factor (ADF) mRNA, complete cds Length = 1022 Score = 38.2 bits (19), Expect = 9.7 Identities = 48/55 (87%), Gaps = 2/55 (3%) Strand = Plus / Plus Query: 7 tatgattttgactttgttactggggagaa-tgtgcagaaaagcaagattttcttc 60 ||||||||||||||||| |||| ||||| ||| || ||||||| |||||||||| Sbjct: 341 tatgattttgactttgtgactgtagagaactgt-cacaaaagcaggattttcttc 394
>emb|AL161756.6|CNS01RHJ Human chromosome 14 DNA sequence BAC R-712C19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 176257 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 aagattttcttcattgcct 67 ||||||||||||||||||| Sbjct: 112457 aagattttcttcattgcct 112475
>gb|BC085077.1| Xenopus laevis hypothetical LOC495490, mRNA (cDNA clone IMAGE:5516313), partial cds Length = 1947 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 35 atgtgcagaaaagcaagat 53 ||||||||||||||||||| Sbjct: 1854 atgtgcagaaaagcaagat 1836
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 82 tcccgcatccgagccaaga 100 ||||||||||||||||||| Sbjct: 19653522 tcccgcatccgagccaaga 19653504
>emb|AL840623.10| Mouse DNA sequence from clone RP23-289L17 on chromosome 4, complete sequence Length = 112610 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 6 ttatgattttgactttgtt 24 ||||||||||||||||||| Sbjct: 100449 ttatgattttgactttgtt 100467
>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0041A22, complete sequence Length = 117919 Score = 38.2 bits (19), Expect = 9.7 Identities = 28/31 (90%) Strand = Plus / Plus Query: 40 cagaaaagcaagattttcttcattgcctggt 70 ||||| |||||||| ||||||||||| |||| Sbjct: 32188 cagaagagcaagatattcttcattgcatggt 32218
>emb|AL844174.2| Mouse DNA sequence from clone RP23-377G5 on chromosome X, complete sequence Length = 157074 Score = 38.2 bits (19), Expect = 9.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 3 gctttatgattttgacttt 21 ||||||||||||||||||| Sbjct: 59731 gctttatgattttgacttt 59749 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,980,051 Number of Sequences: 3902068 Number of extensions: 1980051 Number of successful extensions: 131256 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 105 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 130775 Number of HSP's gapped (non-prelim): 475 length of query: 196 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 174 effective length of database: 17,147,199,772 effective search space: 2983612760328 effective search space used: 2983612760328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)