>Y550_BUCBP (Q89A13) Hypothetical UPF0070 protein bbp_550|
          Length = 193

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = -2

Query: 507 FDTCSVVQEVLPMYFFSNSYADRSLRLTRMSSMCTYWTRSIEIKAGRSM 361
           F TC ++  ++ +YFFS +Y D+       + M T+ T S E+   +++
Sbjct: 18  FLTCMLLIVIVIVYFFSKNYLDKPKNSYVHTKMMTFLTNSNELNISKNL 66

>JHD1_ASPFU (Q4WHB7) JmjC domain-containing histone demethylation protein 1 (EC|
            1.14.11.-)
          Length = 1418

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = +1

Query: 349  GEMRHGAPSLDLNASGPVCTHTAHPGESQASISIAVGEEIHGKD--FLDDGTSVEFMQDA 522
            G+M H    +DL AS    T   H G +Q  ++ AVG+  +     F  D   +E     
Sbjct: 1188 GDMSHTQRPVDLEASSYFGTAHDHNGIAQTKLTSAVGQTSYASPPAFQSDTVVMEVAGQG 1247

Query: 523  LKQPTA 540
            + +PTA
Sbjct: 1248 VSKPTA 1253

>PURK_SYNP7 (Q54975) Phosphoribosylaminoimidazole carboxylase ATPase subunit|
           (EC 4.1.1.21) (AIR carboxylase) (AIRC)
          Length = 395

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 456 NSYADRSLRLTRMSSMCTYWTRSIEIKAGRSMTHLS 349
           + YA+   +L  +   C YW    E K GR + H++
Sbjct: 325 SGYAELRQQLAALPGACLYWYGKTESKPGRKLGHIT 360


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,659,936
Number of Sequences: 219361
Number of extensions: 1648759
Number of successful extensions: 3961
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3961
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)