>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence
          Length = 181676

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 473   ggaaggacttcctggacgacg 493
             |||||||||||||||||||||
Sbjct: 59493 ggaaggacttcctggacgacg 59473

>gb|AY354515.1| Streptomyces sp. HK803 PlmR5 (plmR5), PlmR4 (plmR4), PlmR3 (plmR3),
             PlmR2 (plmR2), Plm8 (plm8), Plm4 (plm4), Plm5 (plm5), Plm6
             (plm6), Plm7 (plm7), PlmT8 (plmT8), PlmT7 (plmT7), PlmT6
             (plmT6), PlmT5 (plmT5), PlmT4 (plmT4), PlmT3 (plmT3),
             PlmT2 (plmT2), PlmT1 (plmT1), Plm1 (plm1), Plm2-3
             (plm2-3), PlmJK (plmJK), PlmL (plmL), ChcA (chcA), PlmM
             (plmM), PlmR1 (plmR1), PlmI (plmI), PlmS2 (plmS2), PlmS3
             (plmS3), and PlmS4 (plmS4) genes, complete cds
          Length = 76196

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     gtgtgaccgagcacctcggtg 24
             |||||||||||||||||||||
Sbjct: 30001 gtgtgaccgagcacctcggtg 29981

>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06,
             complete sequence
          Length = 135774

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 292   tcttcttcctcgacgtggggc 312
             |||||||||||||||||||||
Sbjct: 58097 tcttcttcctcgacgtggggc 58117

>emb|AL022321.1|HS20O8 Human DNA sequence from clone RP1-20O8 on chromosome 22q12.1-12.3
            Contains part of the SLC5A1 gene for solute carrier
            family 5 (sodiumglucose transporter)  member 1, complete
            sequence
          Length = 7846

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 402  atgtacacatactgctcatcc 422
            |||||||||||||||||||||
Sbjct: 5964 atgtacacatactgctcatcc 5944

>emb|Z19058.1|GGCEK7A G.gallus Cek7 gene
          Length = 2396

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 142  gtgtttgacaaattggtccat 162
            |||||||||||||||||||||
Sbjct: 2334 gtgtttgacaaattggtccat 2354

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 292      tcttcttcctcgacgtggggc 312
                |||||||||||||||||||||
Sbjct: 11604162 tcttcttcctcgacgtggggc 11604182

>gb|AC104081.2| Homo sapiens BAC clone RP11-559A1 from 2, complete sequence
          Length = 142118

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 468   acatgggaaggacttcctgga 488
             |||||||||||||||||||||
Sbjct: 24983 acatgggaaggacttcctgga 24963

>emb|AL929153.11| Mouse DNA sequence from clone RP23-55C8 on chromosome 2, complete
            sequence
          Length = 116887

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 473  ggaaggacttcctggacgacg 493
            |||||||||||||||||||||
Sbjct: 4360 ggaaggacttcctggacgacg 4380

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 292      tcttcttcctcgacgtggggc 312
                |||||||||||||||||||||
Sbjct: 11610602 tcttcttcctcgacgtggggc 11610622

>ref|NM_101100.1| Arabidopsis thaliana ATP binding AT1G12280 mRNA, complete cds
          Length = 2685

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 109  gctagattgtgtaggcgtag 128
            ||||||||||||||||||||
Sbjct: 2432 gctagattgtgtaggcgtag 2413

>gb|AY271621.1| Pseudmonas fluorescens ATCC 17400 quinolobactin biosynthesis,
            excretion and uptake gene cluster, complete sequence
          Length = 18788

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  cctcgacgtggggcgcagct 318
            ||||||||||||||||||||
Sbjct: 8679 cctcgacgtggggcgcagct 8660

>ref|XM_644039.1| Entamoeba histolytica HM-1:IMSS Rab GTPase activating protein,
           putative (341.t00006) partial mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 tagctgttggagaagaaata 468
           ||||||||||||||||||||
Sbjct: 806 tagctgttggagaagaaata 825

>emb|AL136123.19| Human DNA sequence from clone RP11-236M15 on chromosome 13 Contains a
              meningioma expressed antigen 6 (coiled-coil proline-rich)
              (MGEA6) pseudogene, the C13orf1 gene for chromosome 13 open
              reading frame 1 and a CpG island, complete sequence
          Length = 178151

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ttgagccatgtgtgtggatc 60
              ||||||||||||||||||||
Sbjct: 162979 ttgagccatgtgtgtggatc 162960

>dbj|AK091143.1| Homo sapiens cDNA FLJ33824 fis, clone CTONG2003372
          Length = 2736

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 438 ttctatcagcatagctgttggagaagaa 465
           |||||||| || ||||||||||||||||
Sbjct: 2   ttctatcatcagagctgttggagaagaa 29

>gb|AF440619.1|AF440619 Homo sapiens 13q14 chronic lymphocytic leukemia suppressor locus
            section 1 of 2
          Length = 350000

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   ttgagccatgtgtgtggatc 60
            ||||||||||||||||||||
Sbjct: 8249 ttgagccatgtgtgtggatc 8230

>gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chromosome unknown,
             complete sequence
          Length = 183880

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   atgtacacatactgctcatc 421
             ||||||||||||||||||||
Sbjct: 25869 atgtacacatactgctcatc 25850

>emb|BX255919.15| Zebrafish DNA sequence from clone DKEY-259P11 in linkage group 8,
              complete sequence
          Length = 168607

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 124    cgtagctacttggtacaagtgttt 147
              |||||||||||||||||| |||||
Sbjct: 168467 cgtagctacttggtacaactgttt 168490

>gb|AF334404.1|AF334404 Homo sapiens chromosome 13q14 BAC clone CITB-369L16, complete
            sequence
          Length = 154868

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   ttgagccatgtgtgtggatc 60
            ||||||||||||||||||||
Sbjct: 8249 ttgagccatgtgtgtggatc 8230

>gb|AC092669.2| Homo sapiens BAC clone RP11-554F14 from 2, complete sequence
          Length = 182462

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 438    ttctatcagcatagctgttggagaagaa 465
              |||||||| || ||||||||||||||||
Sbjct: 165677 ttctatcatcagagctgttggagaagaa 165704

>gb|AC131777.2| Mus musculus BAC clone RP24-318O6 from chromosome 9, complete sequence
          Length = 173761

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 511   atgcaagatgcactgaagcaacca 534
             ||||||||||||||||||| ||||
Sbjct: 56056 atgcaagatgcactgaagccacca 56079

>gb|AC025416.4|AC025416 Genomic sequence for Arabidopsis thaliana BAC F5O11 from chromosome
            I, complete sequence
          Length = 118374

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 109  gctagattgtgtaggcgtag 128
            ||||||||||||||||||||
Sbjct: 4453 gctagattgtgtaggcgtag 4472

>gb|AC109198.9| Mus musculus chromosome 15, clone RP23-31G10, complete sequence
          Length = 207069

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 140    aagtgtttgacaaattggtccatt 163
              ||||||| ||||||||||||||||
Sbjct: 135271 aagtgttggacaaattggtccatt 135294

>emb|AL806527.7| Mouse DNA sequence from clone RP23-44D10 on chromosome 4, complete
             sequence
          Length = 176816

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 370   cccagccttgatctcaatgc 389
             ||||||||||||||||||||
Sbjct: 52522 cccagccttgatctcaatgc 52503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,484,722
Number of Sequences: 3902068
Number of extensions: 3484722
Number of successful extensions: 55479
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55410
Number of HSP's gapped (non-prelim): 69
length of query: 544
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 521
effective length of database: 17,143,297,704
effective search space: 8931658103784
effective search space used: 8931658103784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)