ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16c21 |
|---|---|
| Clone Library Name | barley_pub |
>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)| Length = 895 Score = 245 bits (625), Expect(2) = 5e-65 Identities = 116/169 (68%), Positives = 144/169 (85%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIK 265 K FYL K+SGR+L WQ++LGHCVLK EF +G+KEL VSLFQ++VL++FN+ ++ S +IK Sbjct: 691 KTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIK 750 Query: 266 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 445 ++TGIED ELRRTLQSLACGK RVL K PKG+DI+D D+F+ N+DF L+RIK+N IQM Sbjct: 751 QATGIEDGELRRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQM 810 Query: 446 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 KETVEE STTERVFQDRQYQ+DAAIVRIMK RKTLSH LL++E++ QL Sbjct: 811 KETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQL 859 Score = 22.7 bits (47), Expect(2) = 5e-65 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +3 Query: 3 LQQXYWPTYPPXXCEAP 53 L YWPTY P P Sbjct: 664 LTMGYWPTYVPMEVHLP 680
>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)| Length = 659 Score = 236 bits (603), Expect(2) = 3e-62 Identities = 113/169 (66%), Positives = 139/169 (82%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIK 265 K FYL K+SGR+L WQ +LGH VLK EF +G+KE VSLFQ++VL++FN+ SF +IK Sbjct: 455 KAFYLGKHSGRKLQWQTTLGHAVLKAEFKEGKKEFQVSLFQTLVLLMFNEGDGFSFEEIK 514 Query: 266 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 445 +TGIED ELRRTLQSLACGK RVL K+PKG++++D D+F+FN +F L+RIK+N IQM Sbjct: 515 MATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQM 574 Query: 446 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 KETVEE STTERVFQDRQYQ+DAAIVRIMK RKTL H LL++EL+ QL Sbjct: 575 KETVEEQVSTTERVFQDRQYQIDAAIVRIMKMRKTLGHNLLVSELYNQL 623 Score = 21.9 bits (45), Expect(2) = 3e-62 Identities = 7/11 (63%), Positives = 7/11 (63%) Frame = +3 Query: 3 LQQXYWPTYPP 35 L YWPTY P Sbjct: 428 LTMGYWPTYTP 438
>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)| Length = 734 Score = 152 bits (384), Expect(2) = 7e-38 Identities = 72/165 (43%), Positives = 112/165 (67%), Gaps = 3/165 (1%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDA---QKLSFV 256 ++FYLSK G+++ W SLGHC++K FP G KEL++SLFQ+ VL+ FN+ + +S+ Sbjct: 527 EKFYLSKQVGKKISWYASLGHCIVKARFPLGNKELSISLFQACVLLQFNNCLGGEGISYQ 586 Query: 257 DIKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNA 436 D+K+ST + D +L RTLQSL+C ++R L PK + F NE F+ LYR+K+N Sbjct: 587 DLKKSTELSDIDLTRTLQSLSCARIRPLVMVPKSKKPSPDTMFYVNEKFTDKLYRVKINQ 646 Query: 437 IQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLI 571 I +KE +EN+ E+V +DRQ+++ A+IVR+MK ++ + H L+ Sbjct: 647 IYLKEERQENSDVQEQVVRDRQFELQASIVRVMKQKEKMKHDDLV 691 Score = 24.6 bits (52), Expect(2) = 7e-38 Identities = 8/17 (47%), Positives = 9/17 (52%) Frame = +3 Query: 3 LQQXYWPTYPPXXCEAP 53 L Q YWP+YP P Sbjct: 500 LSQAYWPSYPESHIRLP 516
>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)| Length = 785 Score = 140 bits (353), Expect = 3e-33 Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 5/173 (2%) Frame = +2 Query: 89 EFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQK---LSFVD 259 +FYLSK++GR+L+W S+G ++V F + +L VS SV+L+LF D ++ L F + Sbjct: 575 DFYLSKHTGRKLLWYPSMGSADVRVNFKDRKYDLNVSTIASVILLLFQDLKENQCLIFEE 634 Query: 260 IKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAI 439 I E T IE +L+R LQSLAC K ++L K PKGR+++ D+F FNE+F + L RIK++ + Sbjct: 635 ILEKTNIEVGDLKRNLQSLACAKYKILLKDPKGREVNAGDKFYFNENFVSNLARIKISTV 694 Query: 440 QMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 E E T E+V + R++Q DA IVR+MK RK H L+ E+ +QL Sbjct: 695 AQTRVEDDSERKRTLEKVDESRKHQADACIVRVMKDRKVCEHNQLMAEVTRQL 747
>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)| Length = 768 Score = 130 bits (327), Expect = 3e-30 Identities = 75/195 (38%), Positives = 117/195 (60%), Gaps = 26/195 (13%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEF--PKGRKE--------------------LAVS 199 + FYL+K+SGR+L Q+ +G L F P +++ L VS Sbjct: 536 RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVS 595 Query: 200 LFQSVVLMLFNDAQKLSFVDIKESTGIEDKELRRTLQSLACGK--VRVLQKTPKGRDIDD 373 FQ +LMLFN+ +K +F +I++ T I ++EL R LQSLACGK RVL K PK ++I++ Sbjct: 596 TFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIEN 655 Query: 374 KDEFVFNEDFSAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRK 547 F N+ F++ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK Sbjct: 656 GHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRK 715 Query: 548 TLSHTLLITELFQQL 592 + H +L+ E+ QQL Sbjct: 716 KMQHNVLVAEVTQQL 730
>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)| Length = 768 Score = 130 bits (326), Expect = 4e-30 Identities = 75/195 (38%), Positives = 116/195 (59%), Gaps = 26/195 (13%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEF--PKGRKE--------------------LAVS 199 + FYL+K+SGR+L Q+ +G L F P +++ L VS Sbjct: 536 RRFYLAKHSGRQLTLQHHMGSADLNATFYGPVKKEDGSEVGVGGAQVTGSNTRKHILQVS 595 Query: 200 LFQSVVLMLFNDAQKLSFVDIKESTGIEDKELRRTLQSLACGK--VRVLQKTPKGRDIDD 373 FQ +LMLFN+ +K +F +I++ T I ++EL R LQSLACGK RVL K PK ++I+ Sbjct: 596 TFQMTILMLFNNREKYTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIES 655 Query: 374 KDEFVFNEDFSAPLYRIKVNAIQMK--ETVEENTSTTERVFQDRQYQVDAAIVRIMKTRK 547 F N+ F++ L+R+K+ + K E+ E T ++V DR+++++AAIVRIMK+RK Sbjct: 656 GHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRK 715 Query: 548 TLSHTLLITELFQQL 592 + H +L+ E+ QQL Sbjct: 716 KMQHNVLVAEVTQQL 730
>CUL1_ARATH (Q94AH6) Cullin-1| Length = 738 Score = 124 bits (310), Expect = 3e-28 Identities = 68/169 (40%), Positives = 97/169 (57%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIK 265 K FY +K R+L W SLG C + +F + EL VS +Q+ VL+LFN KLS+ +I Sbjct: 536 KGFYETKTKHRKLTWIYSLGTCHINGKFDQKAIELIVSTYQAAVLLLFNTTDKLSYTEIL 595 Query: 266 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 445 + ++L R L SL+C K ++L K P + + D F FN F+ + RIK+ Sbjct: 596 AQLNLSHEDLVRLLHSLSCAKYKILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPL--- 652 Query: 446 KETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 V+E E V +DR+Y +DAAIVRIMK+RK L H L++E +QL Sbjct: 653 -PPVDERKKVVEDVDKDRRYAIDAAIVRIMKSRKVLGHQQLVSECVEQL 700
>CUL4_CAEEL (Q17392) Cullin-4| Length = 840 Score = 109 bits (273), Expect = 5e-24 Identities = 63/180 (35%), Positives = 101/180 (56%), Gaps = 11/180 (6%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKG-RKELAVSLFQSVVLMLFNDAQKLSFVDI 262 ++FY ++ R + W + L V+ F G +KEL +++Q+V+L+LFN + + +I Sbjct: 625 QDFYRVQHGNRNVKWHHGLASAVISASFRPGCKKELIATMYQTVILLLFNKCETWTVAEI 684 Query: 263 KESTGIEDKELRRTLQSLACG--KVRVLQKTPKGRDIDDK--------DEFVFNEDFSAP 412 E T I + E+ + + +L G K +VLQ+ G + ++FV N F+ Sbjct: 685 VEHTKILEIEVVKNVLALLGGRDKPKVLQRVEGGGSEKKEGTVENLKNEKFVVNSKFTEK 744 Query: 413 LYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 R+++ + +K VEE E V DRQY++DAA+VRIMK RK L+H L+TEL QQL Sbjct: 745 RCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRIMKARKQLNHQTLMTELLQQL 804
>CUL3_CAEEL (Q17391) Cullin-3| Length = 777 Score = 105 bits (263), Expect = 7e-23 Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 31/199 (15%) Frame = +2 Query: 89 EFYLSKYSGRRLMWQNSLGHCVLKVEF---PKG------------------------RKE 187 ++Y K++GR+L LG+ +K F PK K Sbjct: 541 QYYTEKHTGRKLTINTLLGNADVKATFYPPPKASMSNEENGPGPSSSGESMKERKPEHKI 600 Query: 188 LAVSLFQSVVLMLFNDAQKLSFVDIKESTGIEDKELRRTLQSLACGKV--RVLQKTPKGR 361 L V+ Q ++L+ FN ++S + + I ++EL+R LQSLA GK R+L + KG+ Sbjct: 601 LQVNTHQMIILLQFNHHNRISCQQLMDELKIPERELKRNLQSLALGKASQRILVRKNKGK 660 Query: 362 D-IDDKDEFVFNEDFSAPLYRIKVNAIQMK-ETVEENTSTTERVFQDRQYQVDAAIVRIM 535 D ID DEF N++F + L R+KV + K E+ E T ++V DR+ +V+AAIVRIM Sbjct: 661 DAIDMSDEFAVNDNFQSKLTRVKVQMVTGKVESEPEIRETRQKVEDDRKLEVEAAIVRIM 720 Query: 536 KTRKTLSHTLLITELFQQL 592 K RK L+H L+ E+ QQL Sbjct: 721 KARKKLNHNNLVAEVTQQL 739
>CUL2_PONPY (Q5RCF3) Cullin-2 (CUL-2)| Length = 745 Score = 101 bits (251), Expect = 2e-21 Identities = 56/166 (33%), Positives = 94/166 (56%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY +SGR+L W + L +K+ + V+ +Q VL+ FN+++ +S+ ++++S Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602 Query: 272 TGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKE 451 T + +KEL +T++SL V+++ + DID + F N +FS+ + K+ K+ Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKD 660 Query: 452 TVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 589 T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q Sbjct: 661 TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQ 706
>CUL2_HUMAN (Q13617) Cullin-2 (CUL-2)| Length = 745 Score = 101 bits (251), Expect = 2e-21 Identities = 56/166 (33%), Positives = 94/166 (56%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY +SGR+L W + L +K+ + V+ +Q VL+ FN+++ +S+ ++++S Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602 Query: 272 TGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKE 451 T + +KEL +T++SL V+++ + DID + F N +FS+ + K+ K+ Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKD 660 Query: 452 TVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 589 T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q Sbjct: 661 TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQ 706
>CUL2_MOUSE (Q9D4H8) Cullin-2 (CUL-2)| Length = 745 Score = 100 bits (249), Expect = 3e-21 Identities = 56/166 (33%), Positives = 93/166 (56%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY +SGR+L W + L +K+ + V+ +Q VL+ FN+++ +S+ ++++S Sbjct: 543 FYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQDS 602 Query: 272 TGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQMKE 451 T + +KEL +T++SL V+++ + DID + F N FS+ + K+ K+ Sbjct: 603 TQMNEKELTKTIKSLL--DVKMINHDSEKEDIDAESSFSLNMSFSSKRTKFKITTSMQKD 660 Query: 452 TVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 589 T +E T V +DR+ + AAIVRIMK RK L H LI E+ Q Sbjct: 661 TPQELEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQ 706
>CUL1_PONPY (Q5R4G6) Cullin-1 (CUL-1)| Length = 776 Score = 79.7 bits (195), Expect = 6e-15 Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY S++SGR+L W L L K R L S FQ +L+ +N + + +S Sbjct: 569 FYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDS 628 Query: 272 TGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY--------RIK 427 T I+ L + LQ L K+ VL+ + + DE D LY R+ Sbjct: 629 TQIKMDILAQVLQILLKSKLLVLED-----ENANVDEVELKPDTLIKLYLGYKNKKLRVN 683 Query: 428 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 684 INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQL 738
>CUL1_MOUSE (Q9WTX6) Cullin-1 (CUL-1)| Length = 776 Score = 79.7 bits (195), Expect = 6e-15 Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY S++SGR+L W L L K R L S FQ +L+ +N + + +S Sbjct: 569 FYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDS 628 Query: 272 TGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY--------RIK 427 T I+ L + LQ L K+ VL+ + + DE D LY R+ Sbjct: 629 TQIKMDILAQVLQILLKSKLLVLED-----ENANVDEVELKPDTLIKLYLGYKNKKLRVN 683 Query: 428 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 684 INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQL 738
>CUL1_HUMAN (Q13616) Cullin-1 (CUL-1)| Length = 776 Score = 79.7 bits (195), Expect = 6e-15 Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 8/175 (4%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY S++SGR+L W L L K R L S FQ +L+ +N + + +S Sbjct: 569 FYASRHSGRKLTWLYQLSKGELVTNCFKNRYTLQASTFQMAILLQYNTEDAYTVQQLTDS 628 Query: 272 TGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY--------RIK 427 T I+ L + LQ L K+ VL+ + + DE D LY R+ Sbjct: 629 TQIKMDILAQVLQILLKSKLLVLED-----ENANVDEVELKPDTLIKLYLGYKNKKLRVN 683 Query: 428 VNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 +N E +E +T + + +DR+ + AAIVRIMK RK L H L+ E+ QL Sbjct: 684 INVPMKTEQKQEQETTHKNIEEDRKLLIQAAIVRIMKMRKVLKHQQLLGEVLTQL 738
>CUL1_DROME (Q24311) Cullin homolog 1 (Lin-19 homolog protein)| Length = 774 Score = 79.0 bits (193), Expect = 1e-14 Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 3/171 (1%) Frame = +2 Query: 89 EFYLSKYSGRRLMW--QNSLGHCVLKVEFPKGRK-ELAVSLFQSVVLMLFNDAQKLSFVD 259 EFY +++SGR+L W Q G ++ V L S FQ VL+ FND + Sbjct: 568 EFYAARHSGRKLNWLYQMCKGELIMNVNRNNSSTYTLQASTFQMSVLLQFNDQLSFTVQQ 627 Query: 260 IKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAI 439 ++++T + + L + LQ L K +VL + + + D+ RI +N Sbjct: 628 LQDNTQTQQENLIQVLQILL--KAKVLTSSDNENSLTPESTVELFLDYKNKKRRININQP 685 Query: 440 QMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 E E + + + +DR+ + AAIVRIMK RK L+HT LI+E+ QL Sbjct: 686 LKTELKVEQETVHKHIEEDRKLLIQAAIVRIMKMRKRLNHTNLISEVLNQL 736
>CUL5_RAT (Q9JJ31) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 77.8 bits (190), Expect = 2e-14 Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Frame = +2 Query: 83 LKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFND--AQKLSFV 256 ++EFY +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF Sbjct: 558 VEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFE 617 Query: 257 DIKESTGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFS---- 406 ++K +T + D ELRRTL SL K +VL P+ +D + F N+DFS Sbjct: 618 NLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKN 677 Query: 407 -APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 577 R K+N I + E E + Q R + AI++IMK RK +S+ L TE Sbjct: 678 AKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTE 737 Query: 578 LFQQL 592 L + L Sbjct: 738 LVEIL 742
>CUL5_MOUSE (Q9D5V5) Cullin-5 (CUL-5)| Length = 780 Score = 77.8 bits (190), Expect = 2e-14 Identities = 61/185 (32%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Frame = +2 Query: 83 LKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFND--AQKLSFV 256 ++EFY +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF Sbjct: 558 VEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFE 617 Query: 257 DIKESTGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFS---- 406 ++K +T + D ELRRTL SL K +VL P+ +D + F N+DFS Sbjct: 618 NLKLATELPDAELRRTLWSLVAFPKLKRQVLLYDPQVNSPKDFTEGTLFSVNQDFSLIKN 677 Query: 407 -APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 577 R K+N I + E E + Q R + AI++IMK RK +S+ L TE Sbjct: 678 AKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTE 737 Query: 578 LFQQL 592 L + L Sbjct: 738 LVEIL 742
>CUL5_PONPY (Q5RB36) Cullin-5 (CUL-5)| Length = 780 Score = 76.3 bits (186), Expect = 6e-14 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Frame = +2 Query: 83 LKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFND--AQKLSFV 256 ++EFY +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF Sbjct: 558 VEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFE 617 Query: 257 DIKESTGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFS---- 406 ++K +T + D ELRRTL SL K +VL P+ +D + F N++FS Sbjct: 618 NLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKN 677 Query: 407 -APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 577 R K+N I + E E + Q R + AI++IMK RK +S+ L TE Sbjct: 678 AKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTE 737 Query: 578 LFQQL 592 L + L Sbjct: 738 LVEIL 742
>CUL5_HUMAN (Q93034) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 76.3 bits (186), Expect = 6e-14 Identities = 60/185 (32%), Positives = 95/185 (51%), Gaps = 15/185 (8%) Frame = +2 Query: 83 LKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFND--AQKLSFV 256 ++EFY +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF Sbjct: 558 VEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFE 617 Query: 257 DIKESTGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFS---- 406 ++K +T + D ELRRTL SL K +VL P+ +D + F N++FS Sbjct: 618 NLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKN 677 Query: 407 -APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 577 R K+N I + E E + Q R + AI++IMK RK +S+ L TE Sbjct: 678 AKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTQEAIIQIMKMRKKISNAQLQTE 737 Query: 578 LFQQL 592 L + L Sbjct: 738 LVEIL 742
>CUL2_CAEEL (Q17390) Cullin-2| Length = 776 Score = 74.3 bits (181), Expect = 2e-13 Identities = 46/171 (26%), Positives = 87/171 (50%), Gaps = 3/171 (1%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIK 265 ++FY K++GR+L W ++ +++ + + + ++Q L+ F + DI Sbjct: 572 EKFYTGKHNGRKLTWLFNMSQGDVRLTYLDKQYVAQMYVYQMAALLCFERRDAILVKDIG 631 Query: 266 ESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 445 E G+ L +T++++ + V T +++ N ++ + ++ A Q+ Sbjct: 632 EEIGVSGDYLLKTIRTI----LDVTLLTCDDQNLTADSLVRLNMSMTSKRMKFRLQAPQV 687 Query: 446 KETVE---ENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQ 589 + VE E + T +V QDR+Y ++ AIVRIMKTRK L H L+TE+ Q Sbjct: 688 NKAVEKEQEAVANTFQVSQDRKYYMECAIVRIMKTRKVLKHNALVTEIMDQ 738
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 72.0 bits (175), Expect = 1e-12 Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 3/172 (1%) Frame = +2 Query: 86 KEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKE---LAVSLFQSVVLMLFNDAQKLSFV 256 + +Y S ++GR+L W L +K VS +Q VL+L+N ++ Sbjct: 562 QNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYE 621 Query: 257 DIKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNA 436 ++ + TG+ L L KV +L K D + NE+F R+++N Sbjct: 622 ELAKITGLSTDFLTGILNIFLKAKVLLLGDNDKLGD--PNSTYKINENFRMKKIRVQLNL 679 Query: 437 IQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 E +E+ T + + +DR+ + +AIVRIMK R+TL H +L+ E Q+ Sbjct: 680 PIRSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQI 731
>CUL5_RABIT (Q29425) Cullin-5 (CUL-5) (Vasopressin-activated calcium-mobilizing| receptor) (VACM-1) Length = 780 Score = 71.6 bits (174), Expect = 2e-12 Identities = 58/185 (31%), Positives = 93/185 (50%), Gaps = 15/185 (8%) Frame = +2 Query: 83 LKEFYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFND--AQKLSFV 256 ++EFY +SGR+L W + + + ++ + G+ +L V+ FQ VL +N +K+SF Sbjct: 558 VEEFYKKNHSGRKLHWHHLMSNGIITFKNEVGQYDLEVTTFQLAVLFAWNQRPREKISFE 617 Query: 257 DIKESTGIEDKELRRTLQSLACG---KVRVLQKTPK---GRDIDDKDEFVFNEDFS---- 406 ++K +T + D ELRRTL SL K +VL P+ +D + F N++FS Sbjct: 618 NLKLATELPDAELRRTLWSLVAFPKLKRQVLLYEPQVNSPKDFTEGTLFSVNQEFSLIKN 677 Query: 407 -APLYRIKVNAIQMKETVEE--NTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 577 R K+N I + E E + Q R + ++IMK RK +S+ L TE Sbjct: 678 AKVQKRGKINLIGRLQLTTERMREEENEGIVQLRILRTRKLYIQIMKMRKKISNAQLQTE 737 Query: 578 LFQQL 592 L + L Sbjct: 738 LVEIL 742
>CDC53_YEAST (Q12018) Cell division control protein 53 (Cullin-A) (E3 ubiquitin| ligase complex SCF subunit CDC53) Length = 815 Score = 68.9 bits (167), Expect = 1e-11 Identities = 63/201 (31%), Positives = 93/201 (46%), Gaps = 32/201 (15%) Frame = +2 Query: 83 LKEFYLSKYSGRRLMWQNSLGHCVLKVEFPK-GRK--ELAVSLFQSVVLMLFNDAQKLSF 253 LKE Y K++GR L W L LK + K GR V+LFQ +L+L+NDA L+ Sbjct: 586 LKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMAILLLYNDADVLTL 645 Query: 254 VDIKESTGIEDKELRRTLQSLACG-----KVRVLQKTPKGRDIDDKDEFVFNEDFSAPLY 418 +I+E T + T+Q +A K +++Q+ P G D K E F S P Sbjct: 646 ENIQEGTSL-------TIQHIAAAMVPFIKFKLIQQVPPGLDALVKPETQFK--LSRPYK 696 Query: 419 RIKVN---AIQMKETVEENTS-----------------TTERVFQ----DRQYQVDAAIV 526 +K N A +K + ++ S ER+ + +RQ ++A IV Sbjct: 697 ALKTNINFASGVKNDILQSLSGGGHDNHGNKLGNKRLTEDERIEKELNTERQIFLEACIV 756 Query: 527 RIMKTRKTLSHTLLITELFQQ 589 RIMK ++ L HT L+ E Q Sbjct: 757 RIMKAKRNLPHTTLVNECIAQ 777
>CUL6_CAEEL (Q21346) Cullin-6| Length = 729 Score = 66.6 bits (161), Expect = 5e-11 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 3/170 (1%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 FY + ++GRRL W S + + + + V+ Q L LFN+ + I ++ Sbjct: 522 FYNASHNGRRLNWAYSQCRGEVNSKAFEKKYVFIVTASQLCTLYLFNEQDSFTIEQISKA 581 Query: 272 TGIEDKELRRTLQSL--ACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQM 445 + K + SL V V+ K + N ++ R+ + Sbjct: 582 IEMTAKSTSAIVGSLNPVIDPVLVVDKGNEKDGYPPDAVVSLNTKYANKKVRVDLTTAIK 641 Query: 446 KETVEENTSTTERVFQ-DRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 K T + T + + DR+Y++ A IVRIMKTRK+L+HTLLI E+ QL Sbjct: 642 KATADRETDAVQNTVESDRKYEIKACIVRIMKTRKSLTHTLLINEIISQL 691
>CUL1_CAEEL (Q17389) Cullin-1 (Abnormal cell lineage protein 19)| Length = 780 Score = 65.1 bits (157), Expect = 1e-10 Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 3/171 (1%) Frame = +2 Query: 89 EFYLSKYSGRRLMWQNSLGHC-VLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIK 265 +FY K++GRRL W S + FPK + + Q ++LFN+ + I Sbjct: 573 QFYNEKFNGRRLTWVYSQSRGEITSTAFPK-KYVFTATTAQMCTMLLFNEQDSYTVEQIA 631 Query: 266 ESTGIEDKELRRTLQSLACGKV-RVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAIQ 442 +T +++K + SL V + + K ++ N+ + R+ ++ Sbjct: 632 AATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRVDLSKFT 691 Query: 443 MKETVEENTSTTER-VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 MK+ +T ++ V +DR+ + A IVRIMKTRK + H L+TE+ QL Sbjct: 692 MKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQL 742
>CUL5_CAEEL (Q23639) Cullin-5| Length = 741 Score = 63.2 bits (152), Expect = 6e-10 Identities = 55/156 (35%), Positives = 78/156 (50%), Gaps = 17/156 (10%) Frame = +2 Query: 176 GRKELAVSLFQSVVLMLFNDA--QKLSFVDIKESTGIEDKELRRTLQSL-ACGKVR---- 334 GR +L + FQ VL FND K+S ++ +T + D EL RTL SL A K+R Sbjct: 548 GRFDLECTTFQMAVLFCFNDRAHDKISLETLRLATELPDAELNRTLLSLVAYPKMRYQIL 607 Query: 335 ---VLQKTPKGRDIDDKDEFVFNEDFSA-----PLYRIKVNAI-QMKETVEENTSTT-ER 484 V T RD D +F+ N DF+ R KVN I +++ ++E N E Sbjct: 608 LCDVPSTTVTARDFTDSTKFLINHDFNVVKNGKSQQRGKVNLIGRLQLSLEANAEKEHES 667 Query: 485 VFQDRQYQVDAAIVRIMKTRKTLSHTLLITELFQQL 592 + R+ +V IV+I+KTRKT + L EL + L Sbjct: 668 IVALRELRVQEGIVKILKTRKTYTLAQLTMELVEIL 703
>CUL3_YEAST (P53202) Cullin-3 (Cullin-B)| Length = 744 Score = 62.8 bits (151), Expect = 7e-10 Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 6/166 (3%) Frame = +2 Query: 92 FYLSKYSGRRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFVDIKES 271 +Y KY R L W + L + +F G E++ S++ V+ +LF D ++L+ +I E Sbjct: 538 YYSLKYKERVLKWAHHLSVIEIGCQFNSGYYEISFSVYAGVIFLLFEDYEELTLGEIYEL 597 Query: 272 TGIEDKELRRTLQSLA-CGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIKVNAI--- 439 T I +++ + S++ + ++L+K+ ++ +F N FS+P ++KV I Sbjct: 598 THIPIDDVKSLVMSMSTIPRCKILKKSSSSGNM----KFSVNYFFSSPNRKVKVPVIACP 653 Query: 440 --QMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLI 571 K S+ + + ++ A IVRIMKT LSH L+ Sbjct: 654 LPSQKSDNLATASSVDTYDNEIVMELSAIIVRIMKTEGKLSHQQLL 699
>CUL8_YEAST (P47050) Cullin-8| Length = 842 Score = 41.6 bits (96), Expect = 0.002 Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 19/175 (10%) Frame = +2 Query: 125 MWQNSLGHCVLKVEFPKGRKE-----LAVSLFQSVVLMLFNDAQKLSFVDIKESTGIEDK 289 MW +L HC +VE P ++ ++LFQ+ VL LFN++ L+ I E T + K Sbjct: 649 MW--NLHHC--EVESPYIIQDGTNLIFELTLFQTCVLTLFNESDHLTLQVISEQTKLAYK 704 Query: 290 ELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRIK----------VNAI 439 +L L+S K+ RDID + + NE F + ++K ++ Sbjct: 705 DLALVLKSFCNYKILT-------RDID--NTYSINESFKPDMKKVKNGKLRVVLPRTASL 755 Query: 440 QMKETVEENTSTTERVFQDRQYQ---VDAAIVRIMKT-RKTLSHTLLITELFQQL 592 Q T E TS+ + Q+ + A I R +K+ R L + L + QQ+ Sbjct: 756 QSSNTGGERTSSAHHEGSNSQWTQELLKACITRSVKSERNGLDYDHLFETVKQQI 810
>ANC2_HUMAN (Q9UJX6) Anaphase-promoting complex subunit 2 (APC2) (Cyclosome| subunit 2) Length = 822 Score = 34.7 bits (78), Expect = 0.21 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 18/116 (15%) Frame = +2 Query: 89 EFYLSKYSG----RRLMWQNSLGHCVLKVEFPKGRKELAVSLFQSVVLMLFNDAQKLSFV 256 E Y KY R L W+++LG + VE +AV+ Q+V+L+ F D + Sbjct: 620 EAYCKKYEQLKAMRTLSWKHTLGLVTMDVELADRTLSVAVTPVQAVILLYFQDQASWTLE 679 Query: 257 DIKESTGIEDKELRRTLQS-LACGKVR---------VLQKTPKGRD----IDDKDE 382 ++ ++ + LRR + L G +R + ++ P+ RD ID DE Sbjct: 680 ELSKAVKMPVALLRRRMSVWLQQGVLREEPPGTFSVIEEERPQDRDNMVLIDSDDE 735
>CBIT_METJA (Q57836) Probable cobalt-precorrin-6Y C(15)-methyltransferase| [decarboxylating] (EC 2.1.1.-) Length = 183 Score = 31.2 bits (69), Expect = 2.3 Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 10/108 (9%) Frame = +2 Query: 284 DKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEFVFNEDFSAPLYRI----------KVN 433 D + T Q+LA ++ Q KGR D D+ FN+ F I K+N Sbjct: 67 DGAIEVTKQNLAKFNIKNCQII-KGRAEDVLDKLEFNKAFIGGTKNIEKIIEILDKKKIN 125 Query: 434 AIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRKTLSHTLLITE 577 I V EN + F+ R Y VDA V I +K S + + + Sbjct: 126 HIVANTIVLENAAKIINEFESRGYNVDAVNVFISYAKKIPSGHMFLAK 173
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 30.8 bits (68), Expect = 3.1 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 500 DDLEILSQWCLCFLLLFPSSELHSPLCDKGE 408 DDL++L Q+ CFL P+ E +P K E Sbjct: 681 DDLKVLQQFAACFLETLPAQEEQTPKASKRE 711
>ABCA1_HUMAN (O95477) ATP-binding cassette sub-family A member 1 (ATP-binding| cassette transporter 1) (ATP-binding cassette 1) (ABC-1) (Cholesterol efflux regulatory protein) Length = 2261 Score = 29.6 bits (65), Expect = 6.8 Identities = 25/86 (29%), Positives = 42/86 (48%) Frame = +2 Query: 206 QSVVLMLFNDAQKLSFVDIKESTGIEDKELRRTLQSLACGKVRVLQKTPKGRDIDDKDEF 385 +S+V LF+DA++L K+++ + +++ RTLQ Q ++ +D Sbjct: 99 KSIVARLFSDARRLLLYSQKDTSMKDMRKVLRTLQ----------QIKKSSSNLKLQDFL 148 Query: 386 VFNEDFSAPLYRIKVNAIQMKETVEE 463 V NE FS LY N K TV++ Sbjct: 149 VDNETFSGFLYH---NLSLPKSTVDK 171
>YEF5_YEAST (P32616) Hypothetical 16.5 kDa protein in GLY1-GDA1 intergenic| region Length = 141 Score = 29.3 bits (64), Expect = 8.9 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = -1 Query: 493 LKYSLSGACVFFYCF--LHLNCIHLYAIKGSTKIFIKYEFVLIIYISSFWC 347 L YS +G +F+ F L L+ I+ + I ST ++I Y+ VL + + S C Sbjct: 60 LPYSFTGFSFYFFVFFRLFLHWIYAFCICNSTYVYI-YKQVLSLPVKSSMC 109 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,602,832 Number of Sequences: 219361 Number of extensions: 1529230 Number of successful extensions: 3663 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 3549 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3625 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
