ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd16c16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
2dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
3dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
4dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clon... 357 2e-95
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 234 2e-58
6gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare str... 234 2e-58
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
8dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
9gb|AY108108.1| Zea mays PCO072542 mRNA sequence 184 2e-43
10ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative... 165 2e-37
11dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clon... 165 2e-37
12gb|AY108047.1| Zea mays PCO103710 mRNA sequence 151 3e-33
13gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome... 84 5e-13
14gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, c... 84 5e-13
15dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
16gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 84 5e-13
17gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid p... 76 1e-10
18gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome... 42 1.9
19gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phos... 42 1.9
20gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map M... 40 7.4
21gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic... 40 7.4
22gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, pa... 40 7.4
23gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complet... 40 7.4
24emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chr... 40 7.4
25emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II g... 40 7.4
26gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome... 40 7.4
27gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, comple... 40 7.4
28gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, comp... 40 7.4
29gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosom... 40 7.4
30gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8... 40 7.4
31dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.4
32emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in... 40 7.4
33emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, ... 40 7.4
34gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complet... 40 7.4
35dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.4

>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full
            insert sequence
          Length = 1198

 Score =  357 bits (180), Expect = 2e-95
 Identities = 337/386 (87%), Gaps = 3/386 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61
            |||||||||||||||||  ||| || |||||||||||||| ||||||  || |||| |||
Sbjct: 692  gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 748

                                                                        
Query: 62   caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121
            ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| |||
Sbjct: 749  caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 808

                                                                        
Query: 122  cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181
            ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| 
Sbjct: 809  cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 868

                                                                        
Query: 182  ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241
            ||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||| 
Sbjct: 869  ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 928

                                                                        
Query: 242  gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301
            ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 929  gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 988

                                                                        
Query: 302  gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361
            ||||||||||| ||  |||||||  |||||| |  | ||||| ||||| || ||||||||
Sbjct: 989  gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1048

                                      
Query: 362  tccatttatgtcactgcagaatgagg 387
            ||||  ||| |||||| || ||||||
Sbjct: 1049 tccacctatatcactgaagcatgagg 1074



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>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full
            insert sequence
          Length = 1187

 Score =  357 bits (180), Expect = 2e-95
 Identities = 337/386 (87%), Gaps = 3/386 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61
            |||||||||||||||||  ||| || |||||||||||||| ||||||  || |||| |||
Sbjct: 681  gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 737

                                                                        
Query: 62   caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121
            ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| |||
Sbjct: 738  caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 797

                                                                        
Query: 122  cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181
            ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| 
Sbjct: 798  cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 857

                                                                        
Query: 182  ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241
            ||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||| 
Sbjct: 858  ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 917

                                                                        
Query: 242  gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301
            ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 918  gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 977

                                                                        
Query: 302  gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361
            ||||||||||| ||  |||||||  |||||| |  | ||||| ||||| || ||||||||
Sbjct: 978  gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1037

                                      
Query: 362  tccatttatgtcactgcagaatgagg 387
            ||||  ||| |||||| || ||||||
Sbjct: 1038 tccacctatatcactgaagcatgagg 1063



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>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full
            insert sequence
          Length = 1187

 Score =  357 bits (180), Expect = 2e-95
 Identities = 337/386 (87%), Gaps = 3/386 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61
            |||||||||||||||||  ||| || |||||||||||||| ||||||  || |||| |||
Sbjct: 681  gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 737

                                                                        
Query: 62   caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121
            ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| |||
Sbjct: 738  caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 797

                                                                        
Query: 122  cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181
            ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| 
Sbjct: 798  cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 857

                                                                        
Query: 182  ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241
            ||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||| 
Sbjct: 858  ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 917

                                                                        
Query: 242  gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301
            ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 918  gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 977

                                                                        
Query: 302  gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361
            ||||||||||| ||  |||||||  |||||| |  | ||||| ||||| || ||||||||
Sbjct: 978  gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1037

                                      
Query: 362  tccatttatgtcactgcagaatgagg 387
            ||||  ||| |||||| || ||||||
Sbjct: 1038 tccacctatatcactgaagcatgagg 1063



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>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full
            insert sequence
          Length = 1399

 Score =  357 bits (180), Expect = 2e-95
 Identities = 337/386 (87%), Gaps = 3/386 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61
            |||||||||||||||||  ||| || |||||||||||||| ||||||  || |||| |||
Sbjct: 706  gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 762

                                                                        
Query: 62   caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121
            ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| |||
Sbjct: 763  caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 822

                                                                        
Query: 122  cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181
            ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| 
Sbjct: 823  cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 882

                                                                        
Query: 182  ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241
            ||||||||||||||||| |||||||  |||||||||  ||||||||||||||||||||| 
Sbjct: 883  ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 942

                                                                        
Query: 242  gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301
            ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||
Sbjct: 943  gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 1002

                                                                        
Query: 302  gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361
            ||||||||||| ||  |||||||  |||||| |  | ||||| ||||| || ||||||||
Sbjct: 1003 gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1062

                                      
Query: 362  tccatttatgtcactgcagaatgagg 387
            ||||  ||| |||||| || ||||||
Sbjct: 1063 tccacctatatcactgaagcatgagg 1088



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Plus

                                                                           
Query: 150     acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209
               ||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||  |
Sbjct: 7294231 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 7294290

                                                                           
Query: 210     agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269
               ||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||| 
Sbjct: 7294291 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 7294350

                                                                           
Query: 270     taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329
               ||||| ||||||||||||||||||| ||||||||||||||||| ||  |||||||  |||
Sbjct: 7294351 taaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagt 7294410

                                                                         
Query: 330     ggacctcgcgcaaaacaaaccacttccagccctccatttatgtcactgcagaatgagg 387
               ||| |  | ||||| ||||| || ||||||||||||  ||| |||||| || ||||||
Sbjct: 7294411 ggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgagg 7294468



 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                           
Query: 92      ggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaac 151
               |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 7294056 ggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagac 7294115

                 
Query: 152     ag 153
               ||
Sbjct: 7294116 ag 7294117



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 42/47 (89%), Gaps = 2/47 (4%)
 Strand = Plus / Plus

                                                              
Query: 2       gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48
               |||||||||||||||||  ||| || |||||||||||||| ||||||
Sbjct: 7293886 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 7293930



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>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Plus

                                                                         
Query: 150   acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209
             ||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||  |
Sbjct: 45487 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 45546

                                                                         
Query: 210   agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269
             ||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||| 
Sbjct: 45547 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 45606

                                                                         
Query: 270   taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329
             ||||| ||||||||||||||||||| ||||||||||||||||| ||  |||||||  |||
Sbjct: 45607 taaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagt 45666

                                                                       
Query: 330   ggacctcgcgcaaaacaaaccacttccagccctccatttatgtcactgcagaatgagg 387
             ||| |  | ||||| ||||| || ||||||||||||  ||| |||||| || ||||||
Sbjct: 45667 ggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgagg 45724



 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 92    ggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaac 151
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 45312 ggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagac 45371

               
Query: 152   ag 153
             ||
Sbjct: 45372 ag 45373



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 42/47 (89%), Gaps = 2/47 (4%)
 Strand = Plus / Plus

                                                            
Query: 2     gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48
             |||||||||||||||||  ||| || |||||||||||||| ||||||
Sbjct: 45142 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 45186



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  234 bits (118), Expect = 2e-58
 Identities = 208/238 (87%)
 Strand = Plus / Plus

                                                                           
Query: 150     acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209
               ||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||  |
Sbjct: 7292126 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 7292185

                                                                           
Query: 210     agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269
               ||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||| 
Sbjct: 7292186 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 7292245

                                                                           
Query: 270     taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329
               ||||| ||||||||||||||||||| ||||||||||||||||| ||  |||||||  |||
Sbjct: 7292246 taaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagt 7292305

                                                                         
Query: 330     ggacctcgcgcaaaacaaaccacttccagccctccatttatgtcactgcagaatgagg 387
               ||| |  | ||||| ||||| || ||||||||||||  ||| |||||| || ||||||
Sbjct: 7292306 ggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgagg 7292363



 Score =  107 bits (54), Expect = 4e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                           
Query: 92      ggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaac 151
               |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 7291951 ggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagac 7292010

                 
Query: 152     ag 153
               ||
Sbjct: 7292011 ag 7292012



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 42/47 (89%), Gaps = 2/47 (4%)
 Strand = Plus / Plus

                                                              
Query: 2       gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48
               |||||||||||||||||  ||| || |||||||||||||| ||||||
Sbjct: 7291781 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 7291825



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>dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043K11, full
            insert sequence
          Length = 2343

 Score =  222 bits (112), Expect = 9e-55
 Identities = 190/216 (87%)
 Strand = Plus / Minus

                                                                        
Query: 150  acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209
            ||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||  |
Sbjct: 1848 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 1789

                                                                        
Query: 210  agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269
            ||||||||  ||||||||||||||||||||| ||||| ||||||||||||||||||||| 
Sbjct: 1788 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 1729

                                                                        
Query: 270  taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329
            ||||| ||||||||||||||||||| |||| |||||||||||| ||  |||||||  |||
Sbjct: 1728 taaaccaggaccaagctgacttcatattttgtgatgtttctgggaacatcttgtacaagt 1669

                                                
Query: 330  ggacctcgcgcaaaacaaaccacttccagccctcca 365
            ||| |  | ||||| ||||| || ||||||||||||
Sbjct: 1668 ggagcaagagcaaagcaaactacctccagccctcca 1633



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 38/39 (97%)
 Strand = Plus / Minus

                                                   
Query: 92   ggcatcgacttctacatcaatgggcatgaccactgcctg 130
            |||||||||||||||||||||||||| ||||||||||||
Sbjct: 1908 ggcatcgacttctacatcaatgggcacgaccactgcctg 1870



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 42/47 (89%), Gaps = 2/47 (4%)
 Strand = Plus / Minus

                                                           
Query: 2    gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48
            |||||||||||||||||  ||| || |||||||||||||| ||||||
Sbjct: 2078 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 2034



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>gb|AY108108.1| Zea mays PCO072542 mRNA sequence
          Length = 1591

 Score =  184 bits (93), Expect = 2e-43
 Identities = 251/300 (83%), Gaps = 3/300 (1%)
 Strand = Plus / Plus

                                                                        
Query: 1    ggttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcct 60
            |||||||||||| |||||| ||| ||||| ||||| ||  ||||||||| || |||| ||
Sbjct: 918  ggttgggcatcacaccatg-agg-agtgtgagtgagcacagggacaccgagg-agcttct 974

                                                                        
Query: 61   gcaattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatga 120
            | |||| || ||||| ||||||||||  || ||| ||||||||||||||||||| || ||
Sbjct: 975  ggaattactacttccagtcctcaaggacaatggcgtcgacttctacatcaatggacacga 1034

                                                                        
Query: 121  ccactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggagg 180
             ||||| ||||| ||||||||||||||| |||||||| |||| || ||||| || |||||
Sbjct: 1035 tcactgtctggagcacattagcagcagagacagtccactccagtatttcacgagcggagg 1094

                                                                        
Query: 181  cggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttctttta 240
            |||||| || |||||||| ||||||| ||| |||||  | || |||||||  ||||| ||
Sbjct: 1095 cggttccaaggcatggagaggagtcttccatccaaacaaggacaagctccgattcttcta 1154

                                                                        
Query: 241  tgatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatctttta 300
             || |||||||||||||||||||||||||| ||| | ||||| ||| |||| ||||||||
Sbjct: 1155 cgacgggcaagggttcatgtccctccagctgaaccaagaccaggctcactttatctttta 1214



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>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid
           phosphatase (OSJNBa0023I19.10), mRNA
          Length = 1008

 Score =  165 bits (83), Expect = 2e-37
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 71  cttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgaccactgcctg 130
           ||||| ||||||||||  |||||  |||| |||||||||||||||||||| |||||||||
Sbjct: 688 cttcctgtcctcaaggaaaacggtgtcgatttctacatcaatgggcatgatcactgcctg 747

                                                                       
Query: 131 gaacacattagcagcagaaacagtccaatccaatacttcactagtggaggcggttcaaaa 190
           || ||||| |||||||||||||||||||| || |||||||||||||||||||| ||||| 
Sbjct: 748 gagcacatcagcagcagaaacagtccaattcagtacttcactagtggaggcggatcaaag 807

                                                                       
Query: 191 gcatggaggggagtctaccagccaaatgatgataagctccagttcttttatgatgggcaa 250
           |||||||| ||  | |  || | ||| || || |||||||||||||| |||||||| |||
Sbjct: 808 gcatggagaggcatttttcaacaaaacgaagacaagctccagttcttctatgatggacaa 867

                      
Query: 251 gggttcatgtc 261
           |||||| ||||
Sbjct: 868 gggttcctgtc 878



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>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full
           insert sequence
          Length = 1195

 Score =  165 bits (83), Expect = 2e-37
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 71  cttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgaccactgcctg 130
           ||||| ||||||||||  |||||  |||| |||||||||||||||||||| |||||||||
Sbjct: 695 cttcctgtcctcaaggaaaacggtgtcgatttctacatcaatgggcatgatcactgcctg 754

                                                                       
Query: 131 gaacacattagcagcagaaacagtccaatccaatacttcactagtggaggcggttcaaaa 190
           || ||||| |||||||||||||||||||| || |||||||||||||||||||| ||||| 
Sbjct: 755 gagcacatcagcagcagaaacagtccaattcagtacttcactagtggaggcggatcaaag 814

                                                                       
Query: 191 gcatggaggggagtctaccagccaaatgatgataagctccagttcttttatgatgggcaa 250
           |||||||| ||  | |  || | ||| || || |||||||||||||| |||||||| |||
Sbjct: 815 gcatggagaggcatttttcaacaaaacgaagacaagctccagttcttctatgatggacaa 874

                      
Query: 251 gggttcatgtc 261
           |||||| ||||
Sbjct: 875 gggttcctgtc 885



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>gb|AY108047.1| Zea mays PCO103710 mRNA sequence
          Length = 1513

 Score =  151 bits (76), Expect = 3e-33
 Identities = 205/247 (82%), Gaps = 1/247 (0%)
 Strand = Plus / Plus

                                                                        
Query: 25   agtgtcagtgaccatggggacaccgnggnagctcctgcaattgcttcttccggtcctcaa 84
            ||||||||||| ||||| ||||||  || |||| |||||  | || ||||| |||||| |
Sbjct: 794  agtgtcagtgatcatggtgacaccaagg-agctactgcagctactgcttccagtcctcca 852

                                                                        
Query: 85   ggttaacggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcag 144
            ||  |||||| |||| ||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 853  ggccaacggcgtcgatttctacatcaacgggcatgaccactgcctggaacacatcagcag 912

                                                                        
Query: 145  cagaaacagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagt 204
            |||| |||| |||||||| |||||||| || ||||||||||| || |||||||| |||||
Sbjct: 913  cagagacagcccaatccagtacttcacaagcggaggcggttccaaggcatggagaggagt 972

                                                                        
Query: 205  ctaccagccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccct 264
              |  | || |  || ||| | ||| ||||||| || || |||||||| |||||||||||
Sbjct: 973  gcagaaccccaccgaagatgacctcaagttcttctacgacgggcaaggcttcatgtccct 1032

                   
Query: 265  ccagcta 271
            |||||||
Sbjct: 1033 ccagcta 1039



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>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
               Pseudo10p0.0-10p4.4, complete sequence
          Length = 2331000

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                         
Query: 96      tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153
               |||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 1063438 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 1063495



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                           
Query: 151     cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210
               ||||||||| || |||||||||||||||||||| ||||| |||||||| ||  | |  ||
Sbjct: 1063572 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 1063631

                                                                  
Query: 211     gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261
                | ||| || || |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 1063632 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 1063682



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>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence
          Length = 157450

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                       
Query: 96    tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153
             |||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 60891 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 60948



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                         
Query: 151   cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210
             ||||||||| || |||||||||||||||||||| ||||| |||||||| ||  | |  ||
Sbjct: 61025 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 61084

                                                                
Query: 211   gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261
              | ||| || || |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 61085 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 61135



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                         
Query: 96      tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153
               |||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 1063438 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 1063495



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                           
Query: 151     cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210
               ||||||||| || |||||||||||||||||||| ||||| |||||||| ||  | |  ||
Sbjct: 1063572 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 1063631

                                                                  
Query: 211     gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261
                | ||| || || |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 1063632 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 1063682



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 54/58 (93%)
 Strand = Plus / Plus

                                                                         
Query: 96      tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153
               |||| |||||||||||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 1063435 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 1063492



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Plus

                                                                           
Query: 151     cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210
               ||||||||| || |||||||||||||||||||| ||||| |||||||| ||  | |  ||
Sbjct: 1063569 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 1063628

                                                                  
Query: 211     gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261
                | ||| || || |||||||||||||| |||||||| ||||||||| ||||
Sbjct: 1063629 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 1063679



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>gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid phosphatase (PAP) mRNA,
           complete cds
          Length = 996

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 tacatcaatgggcatgaccactgcctggaacacattagcagcagaaacagtccaatccaa 163
           ||||| |||||||||||||||||| |||||||||| || |||| || ||| | |||||||
Sbjct: 712 tacattaatgggcatgaccactgcttggaacacataagtagcacaagcagccaaatccaa 771

                                             
Query: 164 tacttcactagtggaggcggttcaaaagcatgga 197
           | ||| || ||||| || |||||||| |||||||
Sbjct: 772 ttcttaaccagtggtggaggttcaaaggcatgga 805



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>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence
          Length = 202303

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 129   tggaacacattagcagcagaaacag 153
             |||||||||||||||||| ||||||
Sbjct: 20149 tggaacacattagcagcaaaaacag 20173



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>gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phosphatase precursor (PAP)
           mRNA, complete cds
          Length = 939

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 233 ttcttttatgatgggcaagggttcatgtc 261
           ||||| |||||||||||||| ||||||||
Sbjct: 862 ttcttctatgatgggcaaggattcatgtc 890



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>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete
             sequence
          Length = 73587

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   ttgtgaaaaaattgaatgtg 450
             ||||||||||||||||||||
Sbjct: 38727 ttgtgaaaaaattgaatgtg 38746



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>gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic spacer, partial
           sequence; chloroplast
          Length = 307

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 429 atttgtgaaaaaattgaatg 448
           ||||||||||||||||||||
Sbjct: 79  atttgtgaaaaaattgaatg 60



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>gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, partial sequence;
           chloroplast
          Length = 111

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 429 atttgtgaaaaaattgaatg 448
           ||||||||||||||||||||
Sbjct: 82  atttgtgaaaaaattgaatg 63



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>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 372    tcactgcagaatgagggacatgca 395
              |||| |||||||||||||||||||
Sbjct: 122546 tcacagcagaatgagggacatgca 122569



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>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete
             sequence
          Length = 130718

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 515   aaatattgaactggatgtgaattg 538
             |||||||| |||||||||||||||
Sbjct: 89878 aaatattgcactggatgtgaattg 89901



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>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase
            inhibitor protein
          Length = 2143

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 90   acggcatcgacttctacatc 109
            ||||||||||||||||||||
Sbjct: 1454 acggcatcgacttctacatc 1473



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>gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome 7, complete sequence
          Length = 222398

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    ctcctgcaattgcttcttcc 75
             ||||||||||||||||||||
Sbjct: 87493 ctcctgcaattgcttcttcc 87512



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>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence
          Length = 127953

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 353    ttccagccctccatttatgtcact 376
              |||||||||||||||| |||||||
Sbjct: 117384 ttccagccctccatttctgtcact 117361



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>gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, complete sequence
          Length = 217151

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 283    agctgacttcatcttttatgatgtttct 310
              |||||||||||| ||||||| |||||||
Sbjct: 177039 agctgacttcatgttttatgttgtttct 177012



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>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence
          Length = 212484

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ctcctgcaattgcttcttcc 75
              ||||||||||||||||||||
Sbjct: 160895 ctcctgcaattgcttcttcc 160914



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>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence
          Length = 186751

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 130    ggaacacattagcagcagaa 149
              ||||||||||||||||||||
Sbjct: 159083 ggaacacattagcagcagaa 159102



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>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete
              sequence
          Length = 190267

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 342    aaacaaaccacttccagccc 361
              ||||||||||||||||||||
Sbjct: 136995 aaacaaaccacttccagccc 137014



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>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22,
              complete sequence
          Length = 209223

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 347    aaccacttccagccctccat 366
              ||||||||||||||||||||
Sbjct: 125616 aaccacttccagccctccat 125635



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>emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, complete sequence
          Length = 134950

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   ggaacacattagcagcagaa 149
             ||||||||||||||||||||
Sbjct: 83638 ggaacacattagcagcagaa 83657



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>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence
          Length = 210223

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 283  agctgacttcatcttttatgatgtttct 310
            |||||||||||| ||||||| |||||||
Sbjct: 9383 agctgacttcatgttttatgttgtttct 9356



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>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8
          Length = 159490

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   ggaacacattagcagcagaa 149
             ||||||||||||||||||||
Sbjct: 35814 ggaacacattagcagcagaa 35833


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,759,237
Number of Sequences: 3902068
Number of extensions: 4759237
Number of successful extensions: 91392
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91185
Number of HSP's gapped (non-prelim): 193
length of query: 543
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 520
effective length of database: 17,143,297,704
effective search space: 8914514806080
effective search space used: 8914514806080
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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