| Clone Name | basd16c16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-H01, full insert sequence Length = 1198 Score = 357 bits (180), Expect = 2e-95 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61 ||||||||||||||||| ||| || |||||||||||||| |||||| || |||| ||| Sbjct: 692 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 748 Query: 62 caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121 ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| ||| Sbjct: 749 caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 808 Query: 122 cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181 ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 809 cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 868 Query: 182 ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241 ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 869 ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 928 Query: 242 gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| Sbjct: 929 gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 988 Query: 302 gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361 ||||||||||| || ||||||| |||||| | | ||||| ||||| || |||||||| Sbjct: 989 gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1048 Query: 362 tccatttatgtcactgcagaatgagg 387 |||| ||| |||||| || |||||| Sbjct: 1049 tccacctatatcactgaagcatgagg 1074
>dbj|AK104751.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F06, full insert sequence Length = 1187 Score = 357 bits (180), Expect = 2e-95 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61 ||||||||||||||||| ||| || |||||||||||||| |||||| || |||| ||| Sbjct: 681 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 737 Query: 62 caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121 ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| ||| Sbjct: 738 caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 797 Query: 122 cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181 ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 798 cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 857 Query: 182 ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241 ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 858 ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 917 Query: 242 gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| Sbjct: 918 gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 977 Query: 302 gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361 ||||||||||| || ||||||| |||||| | | ||||| ||||| || |||||||| Sbjct: 978 gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1037 Query: 362 tccatttatgtcactgcagaatgagg 387 |||| ||| |||||| || |||||| Sbjct: 1038 tccacctatatcactgaagcatgagg 1063
>dbj|AK104621.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G08, full insert sequence Length = 1187 Score = 357 bits (180), Expect = 2e-95 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61 ||||||||||||||||| ||| || |||||||||||||| |||||| || |||| ||| Sbjct: 681 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 737 Query: 62 caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121 ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| ||| Sbjct: 738 caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 797 Query: 122 cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181 ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 798 cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 857 Query: 182 ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241 ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 858 ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 917 Query: 242 gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| Sbjct: 918 gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 977 Query: 302 gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361 ||||||||||| || ||||||| |||||| | | ||||| ||||| || |||||||| Sbjct: 978 gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1037 Query: 362 tccatttatgtcactgcagaatgagg 387 |||| ||| |||||| || |||||| Sbjct: 1038 tccacctatatcactgaagcatgagg 1063
>dbj|AK070684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062L13, full insert sequence Length = 1399 Score = 357 bits (180), Expect = 2e-95 Identities = 337/386 (87%), Gaps = 3/386 (0%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcctg 61 ||||||||||||||||| ||| || |||||||||||||| |||||| || |||| ||| Sbjct: 706 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacaccaagg-agcttctg 762 Query: 62 caattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgac 121 ||| | || ||||| || || ||||| || |||||||||||||||||||||||||| ||| Sbjct: 763 caacttctacttccagttctgaaggtcaatggcatcgacttctacatcaatgggcacgac 822 Query: 122 cactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggaggc 181 ||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| Sbjct: 823 cactgcctggaacacattagcagcagagacagtcctatccaatacttcacaagtggaggt 882 Query: 182 ggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttcttttat 241 ||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| Sbjct: 883 ggttcaaaagcatggagaggagtcttgcagccaaattctgataagctccagttcttttac 942 Query: 242 gatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatcttttat 301 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||||| |||||| Sbjct: 943 gatggacaagggttcatgtccctccagataaaccaggaccaagctgacttcatattttat 1002 Query: 302 gatgtttctggtaaagtcttgtatgagtggacctcgcgcaaaacaaaccacttccagccc 361 ||||||||||| || ||||||| |||||| | | ||||| ||||| || |||||||| Sbjct: 1003 gatgtttctgggaacatcttgtacaagtggagcaagagcaaagcaaactacctccagccc 1062 Query: 362 tccatttatgtcactgcagaatgagg 387 |||| ||| |||||| || |||||| Sbjct: 1063 tccacctatatcactgaagcatgagg 1088
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 150 acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209 ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| | Sbjct: 7294231 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 7294290 Query: 210 agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 7294291 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 7294350 Query: 270 taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329 ||||| ||||||||||||||||||| ||||||||||||||||| || ||||||| ||| Sbjct: 7294351 taaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagt 7294410 Query: 330 ggacctcgcgcaaaacaaaccacttccagccctccatttatgtcactgcagaatgagg 387 ||| | | ||||| ||||| || |||||||||||| ||| |||||| || |||||| Sbjct: 7294411 ggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgagg 7294468 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 92 ggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaac 151 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 7294056 ggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagac 7294115 Query: 152 ag 153 || Sbjct: 7294116 ag 7294117 Score = 40.1 bits (20), Expect = 7.4 Identities = 42/47 (89%), Gaps = 2/47 (4%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48 ||||||||||||||||| ||| || |||||||||||||| |||||| Sbjct: 7293886 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 7293930
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 150 acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209 ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| | Sbjct: 45487 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 45546 Query: 210 agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 45547 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 45606 Query: 270 taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329 ||||| ||||||||||||||||||| ||||||||||||||||| || ||||||| ||| Sbjct: 45607 taaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagt 45666 Query: 330 ggacctcgcgcaaaacaaaccacttccagccctccatttatgtcactgcagaatgagg 387 ||| | | ||||| ||||| || |||||||||||| ||| |||||| || |||||| Sbjct: 45667 ggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgagg 45724 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 92 ggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaac 151 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 45312 ggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagac 45371 Query: 152 ag 153 || Sbjct: 45372 ag 45373 Score = 40.1 bits (20), Expect = 7.4 Identities = 42/47 (89%), Gaps = 2/47 (4%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48 ||||||||||||||||| ||| || |||||||||||||| |||||| Sbjct: 45142 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 45186
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 234 bits (118), Expect = 2e-58 Identities = 208/238 (87%) Strand = Plus / Plus Query: 150 acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209 ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| | Sbjct: 7292126 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 7292185 Query: 210 agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 7292186 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 7292245 Query: 270 taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329 ||||| ||||||||||||||||||| ||||||||||||||||| || ||||||| ||| Sbjct: 7292246 taaaccaggaccaagctgacttcatattttatgatgtttctgggaacatcttgtacaagt 7292305 Query: 330 ggacctcgcgcaaaacaaaccacttccagccctccatttatgtcactgcagaatgagg 387 ||| | | ||||| ||||| || |||||||||||| ||| |||||| || |||||| Sbjct: 7292306 ggagcaagagcaaagcaaactacctccagccctccacctatatcactgaagcatgagg 7292363 Score = 107 bits (54), Expect = 4e-20 Identities = 60/62 (96%) Strand = Plus / Plus Query: 92 ggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaac 151 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 7291951 ggcatcgacttctacatcaatgggcacgaccactgcctggaacacattagcagcagagac 7292010 Query: 152 ag 153 || Sbjct: 7292011 ag 7292012 Score = 40.1 bits (20), Expect = 7.4 Identities = 42/47 (89%), Gaps = 2/47 (4%) Strand = Plus / Plus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48 ||||||||||||||||| ||| || |||||||||||||| |||||| Sbjct: 7291781 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 7291825
>dbj|AK073387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043K11, full insert sequence Length = 2343 Score = 222 bits (112), Expect = 9e-55 Identities = 190/216 (87%) Strand = Plus / Minus Query: 150 acagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacc 209 ||||||| |||||||||||||| |||||||| ||||||||||||||||| ||||||| | Sbjct: 1848 acagtcctatccaatacttcacaagtggaggtggttcaaaagcatggagaggagtcttgc 1789 Query: 210 agccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccctccagc 269 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct: 1788 agccaaattctgataagctccagttcttttacgatggacaagggttcatgtccctccaga 1729 Query: 270 taaacaaggaccaagctgacttcatcttttatgatgtttctggtaaagtcttgtatgagt 329 ||||| ||||||||||||||||||| |||| |||||||||||| || ||||||| ||| Sbjct: 1728 taaaccaggaccaagctgacttcatattttgtgatgtttctgggaacatcttgtacaagt 1669 Query: 330 ggacctcgcgcaaaacaaaccacttccagccctcca 365 ||| | | ||||| ||||| || |||||||||||| Sbjct: 1668 ggagcaagagcaaagcaaactacctccagccctcca 1633 Score = 69.9 bits (35), Expect = 8e-09 Identities = 38/39 (97%) Strand = Plus / Minus Query: 92 ggcatcgacttctacatcaatgggcatgaccactgcctg 130 |||||||||||||||||||||||||| |||||||||||| Sbjct: 1908 ggcatcgacttctacatcaatgggcacgaccactgcctg 1870 Score = 40.1 bits (20), Expect = 7.4 Identities = 42/47 (89%), Gaps = 2/47 (4%) Strand = Plus / Minus Query: 2 gttgggcatcataccatgnaggnagtgtcagtgaccatggggacacc 48 ||||||||||||||||| ||| || |||||||||||||| |||||| Sbjct: 2078 gttgggcatcataccat-tagg-agcgtcagtgaccatggtgacacc 2034
>gb|AY108108.1| Zea mays PCO072542 mRNA sequence Length = 1591 Score = 184 bits (93), Expect = 2e-43 Identities = 251/300 (83%), Gaps = 3/300 (1%) Strand = Plus / Plus Query: 1 ggttgggcatcataccatgnaggnagtgtcagtgaccatggggacaccgnggnagctcct 60 |||||||||||| |||||| ||| ||||| ||||| || ||||||||| || |||| || Sbjct: 918 ggttgggcatcacaccatg-agg-agtgtgagtgagcacagggacaccgagg-agcttct 974 Query: 61 gcaattgcttcttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatga 120 | |||| || ||||| |||||||||| || ||| ||||||||||||||||||| || || Sbjct: 975 ggaattactacttccagtcctcaaggacaatggcgtcgacttctacatcaatggacacga 1034 Query: 121 ccactgcctggaacacattagcagcagaaacagtccaatccaatacttcactagtggagg 180 ||||| ||||| ||||||||||||||| |||||||| |||| || ||||| || ||||| Sbjct: 1035 tcactgtctggagcacattagcagcagagacagtccactccagtatttcacgagcggagg 1094 Query: 181 cggttcaaaagcatggaggggagtctaccagccaaatgatgataagctccagttctttta 240 |||||| || |||||||| ||||||| ||| ||||| | || ||||||| ||||| || Sbjct: 1095 cggttccaaggcatggagaggagtcttccatccaaacaaggacaagctccgattcttcta 1154 Query: 241 tgatgggcaagggttcatgtccctccagctaaacaaggaccaagctgacttcatctttta 300 || |||||||||||||||||||||||||| ||| | ||||| ||| |||| |||||||| Sbjct: 1155 cgacgggcaagggttcatgtccctccagctgaaccaagaccaggctcactttatctttta 1214
>ref|NM_194612.1| Oryza sativa (japonica cultivar-group) putative purple acid phosphatase (OSJNBa0023I19.10), mRNA Length = 1008 Score = 165 bits (83), Expect = 2e-37 Identities = 164/191 (85%) Strand = Plus / Plus Query: 71 cttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgaccactgcctg 130 ||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||||||| Sbjct: 688 cttcctgtcctcaaggaaaacggtgtcgatttctacatcaatgggcatgatcactgcctg 747 Query: 131 gaacacattagcagcagaaacagtccaatccaatacttcactagtggaggcggttcaaaa 190 || ||||| |||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 748 gagcacatcagcagcagaaacagtccaattcagtacttcactagtggaggcggatcaaag 807 Query: 191 gcatggaggggagtctaccagccaaatgatgataagctccagttcttttatgatgggcaa 250 |||||||| || | | || | ||| || || |||||||||||||| |||||||| ||| Sbjct: 808 gcatggagaggcatttttcaacaaaacgaagacaagctccagttcttctatgatggacaa 867 Query: 251 gggttcatgtc 261 |||||| |||| Sbjct: 868 gggttcctgtc 878
>dbj|AK110804.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-E10, full insert sequence Length = 1195 Score = 165 bits (83), Expect = 2e-37 Identities = 164/191 (85%) Strand = Plus / Plus Query: 71 cttccggtcctcaaggttaacggcatcgacttctacatcaatgggcatgaccactgcctg 130 ||||| |||||||||| ||||| |||| |||||||||||||||||||| ||||||||| Sbjct: 695 cttcctgtcctcaaggaaaacggtgtcgatttctacatcaatgggcatgatcactgcctg 754 Query: 131 gaacacattagcagcagaaacagtccaatccaatacttcactagtggaggcggttcaaaa 190 || ||||| |||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct: 755 gagcacatcagcagcagaaacagtccaattcagtacttcactagtggaggcggatcaaag 814 Query: 191 gcatggaggggagtctaccagccaaatgatgataagctccagttcttttatgatgggcaa 250 |||||||| || | | || | ||| || || |||||||||||||| |||||||| ||| Sbjct: 815 gcatggagaggcatttttcaacaaaacgaagacaagctccagttcttctatgatggacaa 874 Query: 251 gggttcatgtc 261 |||||| |||| Sbjct: 875 gggttcctgtc 885
>gb|AY108047.1| Zea mays PCO103710 mRNA sequence Length = 1513 Score = 151 bits (76), Expect = 3e-33 Identities = 205/247 (82%), Gaps = 1/247 (0%) Strand = Plus / Plus Query: 25 agtgtcagtgaccatggggacaccgnggnagctcctgcaattgcttcttccggtcctcaa 84 ||||||||||| ||||| |||||| || |||| ||||| | || ||||| |||||| | Sbjct: 794 agtgtcagtgatcatggtgacaccaagg-agctactgcagctactgcttccagtcctcca 852 Query: 85 ggttaacggcatcgacttctacatcaatgggcatgaccactgcctggaacacattagcag 144 || |||||| |||| ||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 853 ggccaacggcgtcgatttctacatcaacgggcatgaccactgcctggaacacatcagcag 912 Query: 145 cagaaacagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagt 204 |||| |||| |||||||| |||||||| || ||||||||||| || |||||||| ||||| Sbjct: 913 cagagacagcccaatccagtacttcacaagcggaggcggttccaaggcatggagaggagt 972 Query: 205 ctaccagccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtccct 264 | | || | || ||| | ||| ||||||| || || |||||||| ||||||||||| Sbjct: 973 gcagaaccccaccgaagatgacctcaagttcttctacgacgggcaaggcttcatgtccct 1032 Query: 265 ccagcta 271 ||||||| Sbjct: 1033 ccagcta 1039
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 96 tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153 |||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 1063438 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 1063495 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 151 cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210 ||||||||| || |||||||||||||||||||| ||||| |||||||| || | | || Sbjct: 1063572 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 1063631 Query: 211 gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261 | ||| || || |||||||||||||| |||||||| ||||||||| |||| Sbjct: 1063632 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 1063682
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 96 tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153 |||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 60891 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 60948 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 151 cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210 ||||||||| || |||||||||||||||||||| ||||| |||||||| || | | || Sbjct: 61025 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 61084 Query: 211 gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261 | ||| || || |||||||||||||| |||||||| ||||||||| |||| Sbjct: 61085 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 61135
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 96 tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153 |||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 1063438 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 1063495 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 151 cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210 ||||||||| || |||||||||||||||||||| ||||| |||||||| || | | || Sbjct: 1063572 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 1063631 Query: 211 gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261 | ||| || || |||||||||||||| |||||||| ||||||||| |||| Sbjct: 1063632 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 1063682
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 5e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 96 tcgacttctacatcaatgggcatgaccactgcctggaacacattagcagcagaaacag 153 |||| |||||||||||||||||||| ||||||||||| ||||| |||||||||||||| Sbjct: 1063435 tcgatttctacatcaatgggcatgatcactgcctggagcacatcagcagcagaaacag 1063492 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 151 cagtccaatccaatacttcactagtggaggcggttcaaaagcatggaggggagtctacca 210 ||||||||| || |||||||||||||||||||| ||||| |||||||| || | | || Sbjct: 1063569 cagtccaattcagtacttcactagtggaggcggatcaaaggcatggagaggcatttttca 1063628 Query: 211 gccaaatgatgataagctccagttcttttatgatgggcaagggttcatgtc 261 | ||| || || |||||||||||||| |||||||| ||||||||| |||| Sbjct: 1063629 acaaaacgaagacaagctccagttcttctatgatggacaagggttcctgtc 1063679
>gb|AF236109.1|AF236109 Phaseolus vulgaris putative purple acid phosphatase (PAP) mRNA, complete cds Length = 996 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 104 tacatcaatgggcatgaccactgcctggaacacattagcagcagaaacagtccaatccaa 163 ||||| |||||||||||||||||| |||||||||| || |||| || ||| | ||||||| Sbjct: 712 tacattaatgggcatgaccactgcttggaacacataagtagcacaagcagccaaatccaa 771 Query: 164 tacttcactagtggaggcggttcaaaagcatgga 197 | ||| || ||||| || |||||||| ||||||| Sbjct: 772 ttcttaaccagtggtggaggttcaaaggcatgga 805
>gb|AC154757.2| Mus musculus BAC clone RP23-116J1 from chromosome 14, complete sequence Length = 202303 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 129 tggaacacattagcagcagaaacag 153 |||||||||||||||||| |||||| Sbjct: 20149 tggaacacattagcagcaaaaacag 20173
>gb|AF236107.1|AF236107 Ipomoea batatas putative purple acid phosphatase precursor (PAP) mRNA, complete cds Length = 939 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 233 ttcttttatgatgggcaagggttcatgtc 261 ||||| |||||||||||||| |||||||| Sbjct: 862 ttcttctatgatgggcaaggattcatgtc 890
>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete sequence Length = 73587 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttgtgaaaaaattgaatgtg 450 |||||||||||||||||||| Sbjct: 38727 ttgtgaaaaaattgaatgtg 38746
>gb|AY757038.1| Macrohasseltia macroterantha trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 307 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 atttgtgaaaaaattgaatg 448 |||||||||||||||||||| Sbjct: 79 atttgtgaaaaaattgaatg 60
>gb|AY756988.1| Azara salicifolia trnL-trnF intergenic spacer, partial sequence; chloroplast Length = 111 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 atttgtgaaaaaattgaatg 448 |||||||||||||||||||| Sbjct: 82 atttgtgaaaaaattgaatg 63
>gb|AC003986.2| Homo sapiens BAC clone CTA-370M10 from 7, complete sequence Length = 188205 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 372 tcactgcagaatgagggacatgca 395 |||| ||||||||||||||||||| Sbjct: 122546 tcacagcagaatgagggacatgca 122569
>emb|AL354704.17| Human DNA sequence from clone RP11-630H9 on chromosome 9, complete sequence Length = 130718 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 515 aaatattgaactggatgtgaattg 538 |||||||| ||||||||||||||| Sbjct: 89878 aaatattgcactggatgtgaattg 89901
>emb|AJ318884.1|TTU318884 Triticum turgidum subsp. durum xip-II gene for putative xylanase inhibitor protein Length = 2143 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 acggcatcgacttctacatc 109 |||||||||||||||||||| Sbjct: 1454 acggcatcgacttctacatc 1473
>gb|AC151838.6| Mus musculus BAC clone RP23-226C6 from chromosome 7, complete sequence Length = 222398 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctcctgcaattgcttcttcc 75 |||||||||||||||||||| Sbjct: 87493 ctcctgcaattgcttcttcc 87512
>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence Length = 127953 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 353 ttccagccctccatttatgtcact 376 |||||||||||||||| ||||||| Sbjct: 117384 ttccagccctccatttctgtcact 117361
>gb|AC152401.6| Mus musculus chromosome 3, clone RP23-287A2, complete sequence Length = 217151 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 283 agctgacttcatcttttatgatgtttct 310 |||||||||||| ||||||| ||||||| Sbjct: 177039 agctgacttcatgttttatgttgtttct 177012
>gb|AC151841.5| Mus musculus BAC clone RP23-128P10 from chromosome 7, complete sequence Length = 212484 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 ctcctgcaattgcttcttcc 75 |||||||||||||||||||| Sbjct: 160895 ctcctgcaattgcttcttcc 160914
>gb|AC023344.4|AC023344 Homo sapiens BAC clone RP11-395G23 from 8, complete sequence Length = 186751 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaacacattagcagcagaa 149 |||||||||||||||||||| Sbjct: 159083 ggaacacattagcagcagaa 159102
>dbj|AP006285.2| Homo sapiens genomic DNA, chromosome 11 clone:RP13-25N22, complete sequence Length = 190267 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 342 aaacaaaccacttccagccc 361 |||||||||||||||||||| Sbjct: 136995 aaacaaaccacttccagccc 137014
>emb|BX649294.7| Zebrafish DNA sequence from clone CH211-223C9 in linkage group 22, complete sequence Length = 209223 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 aaccacttccagccctccat 366 |||||||||||||||||||| Sbjct: 125616 aaccacttccagccctccat 125635
>emb|CT823560.2| Human DNA sequence from clone XX-HCC1954_31G13, complete sequence Length = 134950 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaacacattagcagcagaa 149 |||||||||||||||||||| Sbjct: 83638 ggaacacattagcagcagaa 83657
>gb|AC122183.4| Mus musculus BAC clone RP23-14P23 from 3, complete sequence Length = 210223 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 283 agctgacttcatcttttatgatgtttct 310 |||||||||||| ||||||| ||||||| Sbjct: 9383 agctgacttcatgttttatgttgtttct 9356
>dbj|AP003353.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1491A8 Length = 159490 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ggaacacattagcagcagaa 149 |||||||||||||||||||| Sbjct: 35814 ggaacacattagcagcagaa 35833 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,759,237 Number of Sequences: 3902068 Number of extensions: 4759237 Number of successful extensions: 91392 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91185 Number of HSP's gapped (non-prelim): 193 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)