ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16b17 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119061 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 119002 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119001 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 118942 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118941 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 118882 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118881 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 118822 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118821 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 118762 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118761 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118702 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118701 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 118642 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118641 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 118582 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118581 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 118522 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118521 acaggtcaatattcctgtactaccccttgttggtacgg 118484 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96095 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 96154 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96155 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 96214 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96215 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 96274 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96275 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 96334 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96335 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 96394 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96395 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96454 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96455 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 96514 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96515 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 96574 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96575 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96634 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96635 acaggtcaatattcctgtactaccccttgttggtacgg 96672
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119061 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 119002 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119001 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 118942 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118941 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 118882 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118881 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 118822 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118821 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 118762 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118761 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118702 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118701 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 118642 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118641 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 118582 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118581 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 118522 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118521 acaggtcaatattcctgtactaccccttgttggtacgg 118484 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96095 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 96154 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96155 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 96214 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96215 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 96274 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96275 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 96334 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96335 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 96394 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96395 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96454 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96455 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 96514 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96515 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 96574 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96575 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96634 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96635 acaggtcaatattcctgtactaccccttgttggtacgg 96672
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119010 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 118951 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118950 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 118891 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118890 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 118831 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118830 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 118771 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118770 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 118711 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118710 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118651 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118650 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 118591 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118590 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 118531 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118530 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 118471 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118470 acaggtcaatattcctgtactaccccttgttggtacgg 118433 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96040 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 96099 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96100 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 96159 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96160 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 96219 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96220 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 96279 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96280 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 96339 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96340 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96399 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96400 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 96459 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96460 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 96519 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96520 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96579 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96580 acaggtcaatattcctgtactaccccttgttggtacgg 96617
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508673 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 31508732 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508733 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 31508792 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31508793 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 31508852 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508853 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 31508912 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508913 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 31508972 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508973 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 31509032 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509033 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 31509092 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509093 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 31509152 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509153 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 31509212 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 31509213 acaggtcaatattcctgtactaccccttgttggtacgg 31509250 Score = 787 bits (397), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Minus Query: 113 atgggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggccccta 172 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 173 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 233 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 293 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 353 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 413 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 473 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 512 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11512957 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918 Score = 706 bits (356), Expect = 0.0 Identities = 362/364 (99%) Strand = Plus / Minus Query: 215 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 275 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 335 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 395 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 454 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 455 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 514 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27320364 Query: 515 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320363 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27320304 Query: 575 acgg 578 |||| Sbjct: 27320303 acgg 27320300 Score = 127 bits (64), Expect = 4e-26 Identities = 72/75 (96%) Strand = Plus / Minus Query: 129 atcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtga 188 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 189 taaaggaggtggggg 203 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 69.9 bits (35), Expect = 9e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 132 gtcgagagggaaacagcccggntcaccagctaaggccc 169 ||||||||||||||||||||| |||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 31 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 85 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83923 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 83864 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83863 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 83804 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 83803 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 83744 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83743 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 83684 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83683 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 83624 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83623 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 83564 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83563 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 83504 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83503 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 83444 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83443 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 83384 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 83383 acaggtcaatattcctgtactaccccttgttggtacgg 83346
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119030 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 118971 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118970 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 118911 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118910 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 118851 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118850 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 118791 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118790 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 118731 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118730 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118671 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118670 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 118611 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118610 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 118551 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118550 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 118491 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118490 acaggtcaatattcctgtactaccccttgttggtacgg 118453 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96088 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 96147 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 96207 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96208 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 96267 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96268 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 96327 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96328 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 96387 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96388 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96447 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 96507 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96508 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 96567 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96568 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96627 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96628 acaggtcaatattcctgtactaccccttgttggtacgg 96665
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123136 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 123195 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123196 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 123255 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123256 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 123315 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123316 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 123375 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123376 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 123435 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123436 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 123495 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123496 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 123555 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123556 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 123615 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123616 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 123675 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 123676 acaggtcaatattcctgtactaccccttgttggtacgg 123713 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14862 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 14921 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14922 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 14981 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 14982 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 15041 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15042 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 15101 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15102 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 15161 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15162 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 15221 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15222 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 15281 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15282 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 15341 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15342 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 15401 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 15402 acaggtcaatattcctgtactaccccttgttggtacgg 15439
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141670 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 141729 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141730 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 141789 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 141790 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 141849 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141850 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 141909 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141910 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 141969 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141970 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 142029 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142030 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 142089 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142090 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 142149 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142150 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 142209 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 142210 acaggtcaatattcctgtactaccccttgttggtacgg 142247
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269022 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 9269081 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269082 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 9269141 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9269142 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 9269201 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269202 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 9269261 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269262 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 9269321 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269322 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9269381 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269382 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 9269441 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269442 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 9269501 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269502 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 9269561 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9269562 acaggtcaatattcctgtactaccccttgttggtacgg 9269599 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228522 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 9228581 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228582 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 9228641 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9228642 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 9228701 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228702 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 9228761 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228762 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 9228821 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228822 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9228881 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228882 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 9228941 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228942 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 9229001 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229002 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 9229061 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9229062 acaggtcaatattcctgtactaccccttgttggtacgg 9229099 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165110 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 9165169 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165170 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 9165229 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9165230 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 9165289 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165290 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 9165349 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165350 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 9165409 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165410 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9165469 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165470 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 9165529 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165530 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 9165589 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165590 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 9165649 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9165650 acaggtcaatattcctgtactaccccttgttggtacgg 9165687 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056936 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 9056995 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056996 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 9057055 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9057056 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 9057115 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057116 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 9057175 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057176 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 9057235 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057236 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9057295 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057296 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 9057355 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057356 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 9057415 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057416 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 9057475 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9057476 acaggtcaatattcctgtactaccccttgttggtacgg 9057513
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939007 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 19939066 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939067 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 19939126 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 19939127 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 19939186 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939187 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 19939246 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939247 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 19939306 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939307 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 19939366 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939367 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 19939426 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939427 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 19939486 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939487 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 19939546 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 19939547 acaggtcaatattcctgtactaccccttgttggtacgg 19939584 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276424 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 10276365 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276364 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 10276305 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10276304 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 10276245 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276244 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 10276185 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276184 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 10276125 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276124 gctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 10276065 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276064 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 10276005 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276004 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 10275945 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275944 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 10275885 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 10275884 acaggtcaatattcctgtactaccccttgttggtacgg 10275847 Score = 1124 bits (567), Expect = 0.0 Identities = 575/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387874 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 10387933 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387934 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 10387993 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10387994 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 10388053 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388054 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 10388113 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388114 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 10388173 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10388174 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 10388233 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388234 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 10388293 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388294 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 10388353 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388354 ttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 10388413 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 10388414 acaggtcaatattcctgtactaccccttgttggtacgg 10388451 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 269 gatcgagcgcccttgcgctgaagatgaacggggctaagc 307 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 38 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 97 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 98 tcggccagtgagacgatgggggataagcttcatcgtcgagag 139 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 210 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241259 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 9241200 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241199 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 9241140 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 9241139 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 9241080 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241079 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 9241020 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241019 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 9240960 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240959 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 9240900 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240899 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 9240840 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240839 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 9240780 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240779 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 9240720 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 9240719 acaggtcaatattcctgtactaccccttgttggtacgg 9240682 Score = 182 bits (92), Expect = 8e-43 Identities = 150/167 (89%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 3 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 62 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 63 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 122 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcggt-agtgagacgatgggggata 3580431 Query: 123 agcttcatcgtcgagagggaaacagcccggn-tcaccagctaaggcc 168 ||||||||||||||||| |||||| ||| ||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 157 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 210 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 211 acagccaggaggtttgcctagaagcagccaccctttaaagag 252 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 318 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 364 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 467 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 |||||||| |||| |||||||| |||| |||| | ||||||||||||||||| Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagct 321 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Minus Query: 156 accagctaaggcccctaaatgaccgctcagtgataaagga 195 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599189 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 31599248 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599249 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 31599308 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 31599309 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 31599368 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599369 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 31599428 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599429 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 31599488 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599489 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 31599548 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599549 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 31599608 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599609 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 31599668 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599669 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 31599728 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 31599729 acaggtcaatattcctgtactaccccttgttggtacgg 31599766 Score = 787 bits (397), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Minus Query: 113 atgggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggccccta 172 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 173 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 233 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 293 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 353 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 413 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 473 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 512 |||||||||||||||||||||||||||||||||||||||| Sbjct: 11509720 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681 Score = 706 bits (356), Expect = 0.0 Identities = 362/364 (99%) Strand = Plus / Minus Query: 215 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 275 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 335 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 395 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 454 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 455 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 514 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 27411687 Query: 515 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411686 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 27411627 Query: 575 acgg 578 |||| Sbjct: 27411626 acgg 27411623 Score = 127 bits (64), Expect = 4e-26 Identities = 72/75 (96%) Strand = Plus / Minus Query: 129 atcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtga 188 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 189 taaaggaggtggggg 203 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 69.9 bits (35), Expect = 9e-09 Identities = 37/38 (97%) Strand = Plus / Plus Query: 132 gtcgagagggaaacagcccggntcaccagctaaggccc 169 ||||||||||||||||||||| |||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 31 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 85 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47036 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 46977 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46976 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 46917 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 46916 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 46857 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46856 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 46797 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46796 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 46737 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46736 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 46677 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46676 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 46617 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46616 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 46557 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46556 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 46497 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 46496 acaggtcaatattcctgtactaccccttgttggtacgg 46459
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52472 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 52413 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52412 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 52353 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 52352 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 52293 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52292 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 52233 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52232 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 52173 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52172 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 52113 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52112 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 52053 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52052 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 51993 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51992 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 51933 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 51932 acaggtcaatattcctgtactaccccttgttggtacgg 51895
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 533 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 593 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 594 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 653 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 713 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 773 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 833 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 834 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 893 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 953 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 1013 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1014 acaggtcaatattcctgtactaccccttgttggtacgg 1051
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 728 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 788 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 789 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 848 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 908 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 968 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1028 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 1088 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 1148 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 1208 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1209 acaggtcaatattcctgtactaccccttgttggtacgg 1246
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 599 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 659 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 660 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 719 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 779 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 780 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 839 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 840 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 899 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 900 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 959 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 960 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 1019 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1020 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 1079 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1080 acaggtcaatattcctgtactaccccttgttggtacgg 1117
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 669 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 728 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 788 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 789 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 848 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 908 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 909 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 968 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1028 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 1088 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 1148 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 1208 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1209 acaggtcaatattcctgtactaccccttgttggtacgg 1246
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950283 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 19950342 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950343 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 19950402 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 19950403 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 19950462 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950463 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 19950522 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950523 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 19950582 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950583 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 19950642 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950643 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 19950702 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950703 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 19950762 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950763 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 19950822 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 19950823 acaggtcaatattcctgtactaccccttgttggtacgg 19950860 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282463 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 10282404 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282403 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 10282344 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10282343 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 10282284 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282283 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 10282224 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282223 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 10282164 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282163 gctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 10282104 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282103 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 10282044 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282043 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 10281984 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281983 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 10281924 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 10281923 acaggtcaatattcctgtactaccccttgttggtacgg 10281886 Score = 1124 bits (567), Expect = 0.0 Identities = 575/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393913 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 10393972 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393973 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 10394032 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 10394033 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 10394092 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394093 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 10394152 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394153 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 10394212 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10394213 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 10394272 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394273 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 10394332 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394333 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 10394392 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394393 ttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 10394452 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 10394453 acaggtcaatattcctgtactaccccttgttggtacgg 10394490 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 269 gatcgagcgcccttgcgctgaagatgaacggggctaagc 307 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 38 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 97 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 98 tcggccagtgagacgatgggggataagcttcatcgtcgagag 139 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 210 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119004 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 118945 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118944 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 118885 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118884 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 118825 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118824 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 118765 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118764 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 118705 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118704 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118645 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118644 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 118585 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118584 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 118525 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118524 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 118465 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118464 acaggtcaatattcctgtactaccccttgttggtacgg 118427 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96035 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 96094 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96095 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 96154 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 96155 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 96214 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96215 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 96274 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96275 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 96334 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96335 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96394 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96395 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 96454 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96455 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 96514 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96515 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96574 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96575 acaggtcaatattcctgtactaccccttgttggtacgg 96612
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119196 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 119137 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119136 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 119077 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 119076 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 119017 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119016 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 118957 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118956 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 118897 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118896 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 118837 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118836 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 118777 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118776 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 118717 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118716 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 118657 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 118656 acaggtcaatattcctgtactaccccttgttggtacgg 118619 Score = 1140 bits (575), Expect = 0.0 Identities = 577/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95698 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 95757 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95758 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 95817 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95818 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 95877 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95878 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 95937 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95938 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 95997 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95998 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 96057 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96058 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 96117 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96118 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 96177 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96178 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96237 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 96238 acaggtcaatattcctgtactaccccttgttggtacgg 96275
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117977 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 117918 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117917 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 117858 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 117857 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 117798 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117797 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 117738 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117737 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 117678 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117677 gctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 117618 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117617 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 117558 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117557 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 117498 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117497 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 117438 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 117437 acaggtcaatattcctgtactaccccttgttggtacgg 117400
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44020 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 43961 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43960 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 43901 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 43900 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 43841 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43840 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 43781 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43780 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 43721 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43720 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 43661 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43660 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 43601 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43600 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 43541 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43540 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 43481 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 43480 acaggtcaatattcctgtactaccccttgttggtacgg 43443 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21097 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 21156 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21157 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 21216 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 21217 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 21276 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21277 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 21336 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21337 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 21396 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21397 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 21456 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21457 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 21516 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21517 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 21576 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21577 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 21636 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 21637 acaggtcaatattcctgtactaccccttgttggtacgg 21674
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57749 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 57690 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57689 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 57630 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 57629 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 57570 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57569 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 57510 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57509 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 57450 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57449 gctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 57390 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57389 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 57330 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57329 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 57270 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57269 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 57210 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 57209 acaggtcaatattcctgtactaccccttgttggtacgg 57172
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 591 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 531 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 530 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 471 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 411 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 410 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 351 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 291 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 231 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 230 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 171 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 111 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 110 acaggtcaatattcctgtactaccccttgttggtacgg 73
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122860 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 122801 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122800 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 122741 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 122740 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 122681 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122680 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 122621 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122620 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 122561 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122560 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 122501 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122500 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 122441 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122440 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 122381 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122380 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 122321 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 122320 acaggtcaatattcctgtactaccccttgttggtacgg 122283 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99977 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 100036 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100037 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 100096 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 100097 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 100156 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100157 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 100216 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100217 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 100276 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100277 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 100336 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100337 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 100396 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100397 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 100456 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100457 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 100516 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 100517 acaggtcaatattcctgtactaccccttgttggtacgg 100554
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 292 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 351 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 352 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 411 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 412 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 471 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 472 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 531 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 532 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 591 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 651 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 652 ttagagggaagcaaccgcgaaagcgggggttgacgaagcggaagcgagaatgtcggcttg 711 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 771 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 831 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 832 acaggtcaatattcctgtactaccccttgttggtacgg 869
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123577 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 123518 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123517 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 123458 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 123457 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 123398 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123397 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 123338 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123337 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 123278 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123277 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 123218 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123217 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 123158 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123157 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 123098 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123097 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 123038 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 123037 acaggtcaatattcctgtactaccccttgttggtacgg 123000 Score = 1132 bits (571), Expect = 0.0 Identities = 576/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100654 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 100713 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100714 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 100773 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 100774 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 100833 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100834 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 100893 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100894 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 100953 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100954 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 101013 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101014 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 101073 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101074 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 101133 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101134 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 101193 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 101194 acaggtcaatattcctgtactaccccttgttggtacgg 101231
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1124 bits (567), Expect = 0.0 Identities = 575/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94266 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 94325 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94326 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 94385 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 94386 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 94445 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94446 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 94505 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94506 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 94565 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 94566 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 94625 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94626 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 94685 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94686 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 94745 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94746 ttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 94805 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 94806 acaggtcaatattcctgtactaccccttgttggtacgg 94843
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1124 bits (567), Expect = 0.0 Identities = 575/578 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28330 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 28389 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28390 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 28449 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 28450 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 28509 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28510 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 28569 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28570 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 28629 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 28630 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggagagcgttccgcc 28689 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28690 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 28749 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28750 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 28809 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28810 ttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 28869 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 28870 acaggtcaatattcctgtactaccccttgttggtacgg 28907
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1053 bits (531), Expect = 0.0 Identities = 568/578 (98%), Gaps = 2/578 (0%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122800 ggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctg 122742 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122741 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 122682 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 122681 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccg 122622 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122621 ctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcca 122562 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 122561 ccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctgaagatgaacggg 122503 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122502 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 122443 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122442 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 122383 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122382 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 122323 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122322 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaagtcgatggaca 122263 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 122262 acaggtcaatattcctgtactaccccttgttggtacgg 122225 Score = 1053 bits (531), Expect = 0.0 Identities = 568/578 (98%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 99937 ggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctg 99995 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99996 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 100055 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 100056 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccg 100115 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100116 ctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcca 100175 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 100176 ccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctgaagatgaacggg 100234 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100235 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 100294 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100295 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 100354 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100355 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 100414 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100415 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaagtcgatggaca 100474 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 100475 acaggtcaatattcctgtactaccccttgttggtacgg 100512
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1053 bits (531), Expect = 0.0 Identities = 568/578 (98%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 6290 ggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctg 6348 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6349 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 6408 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 6409 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccg 6468 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 6469 ctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcca 6528 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 6529 ccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctgaagatgaacggg 6587 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6588 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 6647 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6648 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 6707 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6708 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 6767 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 6768 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaagtcgatggaca 6827 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 6828 acaggtcaatattcctgtactaccccttgttggtacgg 6865
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1053 bits (531), Expect = 0.0 Identities = 568/578 (98%), Gaps = 2/578 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 878 ggggtaaagcactgtttcggtgcgg-ctgcgcgagcggtaccaaatcgaggcaaactctg 936 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 996 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 997 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccg 1056 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1057 ctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcctagaagcagcca 1116 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 1117 ccctttaaagagtgcgtaatagctcactgactg-gcgcccttgcgctgaagatgaacggg 1175 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1176 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1235 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1236 ttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 1295 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1296 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 1355 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1356 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggctaagtcgatggaca 1415 Query: 541 acaggtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||||||| Sbjct: 1416 acaggtcaatattcctgtactaccccttgttggtacgg 1453
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1027 bits (518), Expect = 0.0 Identities = 520/521 (99%) Strand = Plus / Plus Query: 58 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 117 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 118 ggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatga 177 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 178 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 238 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 298 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 358 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 418 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 420 Query: 478 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 480 Query: 538 acaacaggtcaatattcctgtactaccccttgttggtacgg 578 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 acaacaggtcaatattcctgtactaccccttgttggtacgg 521
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1021 bits (515), Expect = 0.0 Identities = 517/518 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 290 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 349 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 350 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 409 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 410 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 469 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 529 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 530 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 589 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 590 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 649 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 650 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 709 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 769 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggc 518 |||||||||||||||||||||||||||||||||||||| Sbjct: 770 ttcgtccacggagggtgagtcagggcctaagatcaggc 807
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 1007 bits (508), Expect = 0.0 Identities = 516/519 (99%) Strand = Plus / Minus Query: 40 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 100 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcacca 159 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 160 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 220 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 280 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 340 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 399 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 400 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 100 Query: 460 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 40 Query: 520 gaaaggcgtagtcgatggacaacaggtcaatattcctgt 558 |||||||||| |||||||||||||||||||||||||||| Sbjct: 39 gaaaggcgtactcgatggacaacaggtcaatattcctgt 1
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1001 bits (505), Expect = 0.0 Identities = 510/512 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 668 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 727 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 787 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 788 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 847 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 ctcagtgatagaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 907 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 908 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 967 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1027 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 1087 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 1147 Query: 481 ttcgtccacggagggtgagtcagggcctaaga 512 |||||||||||||||||||||||||||||||| Sbjct: 1148 ttcgtccacggagggtgagtcagggcctaaga 1179
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 981 bits (495), Expect = 0.0 Identities = 554/574 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 865 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 924 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 925 aatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggga 984 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 985 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1044 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1045 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 1104 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1105 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1164 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1224 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1225 ttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttg 1284 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1285 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 1344 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1345 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 1404 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 1405 acaggtgaatattcctgtactaccccttgttggt 1438
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 981 bits (495), Expect = 0.0 Identities = 554/574 (96%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 132132 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 132073 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 132072 aatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggga 132013 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132012 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 131953 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 131952 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 131893 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 131892 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 131833 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131832 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 131773 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 131772 ttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttg 131713 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131712 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 131653 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131652 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 131593 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 131592 acaggtgaatattcctgtactaccccttgttggt 131559 Score = 981 bits (495), Expect = 0.0 Identities = 554/574 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104632 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 104691 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 104692 aatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggga 104751 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104752 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 104811 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 104812 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 104871 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 104872 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 104931 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104932 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 104991 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 104992 ttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttg 105051 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105052 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 105111 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105112 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 105171 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 105172 acaggtgaatattcctgtactaccccttgttggt 105205
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 981 bits (495), Expect = 0.0 Identities = 554/574 (96%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 133093 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 133034 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 133033 aatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggga 132974 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 132973 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 132914 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 132913 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 132854 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 132853 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 132794 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132793 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 132734 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 132733 ttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttg 132674 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132673 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 132614 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132613 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 132554 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 132553 acaggtgaatattcctgtactaccccttgttggt 132520 Score = 981 bits (495), Expect = 0.0 Identities = 554/574 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 105556 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 105615 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 105616 aatactagatatgacctcaaaataactggggtcaaggtcggccagtgagacggtggggga 105675 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 105676 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 105735 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 105736 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 105795 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 105796 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 105855 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105856 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 105915 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 105916 ttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcgagaatgtcggcttg 105975 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105976 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 106035 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106036 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 106095 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 106096 acaggtgaatattcctgtactaccccttgttggt 106129
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 973 bits (491), Expect = 0.0 Identities = 553/574 (96%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 138638 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 138579 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138578 aatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatggggga 138519 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138518 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 138459 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 138458 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 138399 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138398 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 138339 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138338 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 138279 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||| ||||| |||||| || ||||||||||||||||||||||||||||| Sbjct: 138278 ttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggcttg 138219 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138218 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 138159 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138158 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 138099 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 138098 acaggtgaatattcctgtactaccccttgttggt 138065 Score = 973 bits (491), Expect = 0.0 Identities = 553/574 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 110459 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 110518 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 110519 aatactagatatgacctcaaaataacaggggtcgaggtcggccagtgagacgatggggga 110578 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110579 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 110638 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 110639 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 110698 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 110699 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 110758 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110759 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 110818 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||| ||||| |||||| || ||||||||||||||||||||||||||||| Sbjct: 110819 ttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcgagaatgtcggcttg 110878 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110879 agtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 110938 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110939 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 110998 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 110999 acaggtgaatattcctgtactaccccttgttggt 111032
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 965 bits (487), Expect = 0.0 Identities = 552/574 (96%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 141241 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 141182 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 141181 aatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatggggga 141122 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 141121 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 141062 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 141061 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 141002 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 141001 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 140942 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 140941 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 140882 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 140881 ttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 140822 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 140821 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 140762 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140761 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 140702 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 140701 acaggtgaatattcctgtactaccccttgttggt 140668 Score = 965 bits (487), Expect = 0.0 Identities = 552/574 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 112416 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 112475 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112476 aatactagatatgaccccaaaataacaggggtaaaggtcggccagtgagacgatggggga 112535 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112536 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 112595 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 112596 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 112655 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 112656 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 112715 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112716 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 112775 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 112776 ttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 112835 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 112836 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 112895 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112896 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 112955 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 112956 acaggtgaatattcctgtactaccccttgttggt 112989
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 965 bits (487), Expect = 0.0 Identities = 552/574 (96%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 138843 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 138784 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 138783 aatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatggggga 138724 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 138723 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 138664 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 138663 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 138604 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 138603 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 138544 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 138543 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 138484 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 138483 ttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggcttg 138424 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 138423 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 138364 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138363 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 138304 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 138303 acaggtgaatattcctgtactaccccttgttggt 138270 Score = 965 bits (487), Expect = 0.0 Identities = 552/574 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 110456 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 110515 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| Sbjct: 110516 aatactagatatgacctccaaataataggggtcaaggtcggccagtgagacgatggggga 110575 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110576 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 110635 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 110636 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 110695 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 110696 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 110755 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 110756 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 110815 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| |||||| ||| ||||| ||||||||||||||||||||||||||||| Sbjct: 110816 ttagagggaagcacccgcgagagcaggggtggacgaagcggaagcgagaatgtcggcttg 110875 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 110876 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 110935 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110936 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 110995 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 110996 acaggtgaatattcctgtactaccccttgttggt 111029
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 963 bits (486), Expect = 0.0 Identities = 552/574 (96%), Gaps = 4/574 (0%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 126997 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 126938 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 126937 aatactagatatgaccccaaa----caggggtcaaggtcggccagtgagacgatggggga 126882 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 126881 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 126822 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 126821 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 126762 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 126761 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 126702 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126701 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 126642 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| ||||| |||| || || ||||||||||||||||||||||||||||| Sbjct: 126641 ttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttg 126582 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 126581 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 126522 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126521 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 126462 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 126461 acaggtgaatattcctgtactaccccttgttggt 126428 Score = 963 bits (486), Expect = 0.0 Identities = 552/574 (96%), Gaps = 4/574 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107925 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 107984 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 107985 aatactagatatgaccccaaa----caggggtcaaggtcggccagtgagacgatggggga 108040 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108041 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 108100 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 108101 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 108160 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 108161 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 108220 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108221 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 108280 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| ||||| |||| || || ||||||||||||||||||||||||||||| Sbjct: 108281 ttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttg 108340 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 108341 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 108400 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108401 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 108460 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 108461 acaggtgaatattcctgtactaccccttgttggt 108494
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 957 bits (483), Expect = 0.0 Identities = 551/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 130801 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 130742 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130741 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 130682 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 130681 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 130622 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 130621 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 130562 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 130561 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 130502 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 130501 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 130442 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 130441 ttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 130382 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 130381 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 130322 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130321 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 130262 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 130261 acaggtgaatattcctgtactaccccttgttggt 130228 Score = 957 bits (483), Expect = 0.0 Identities = 551/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 103834 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 103893 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103894 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 103953 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 103954 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 104013 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 104014 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 104073 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 104074 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 104133 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 104134 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 104193 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 104194 ttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 104253 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 104254 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 104313 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104314 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 104373 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 104374 acaggtgaatattcctgtactaccccttgttggt 104407
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 957 bits (483), Expect = 0.0 Identities = 552/574 (96%), Gaps = 1/574 (0%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 133356 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 133297 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 133296 aatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatggggga 133238 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133237 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 133178 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct: 133177 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgcca 133118 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 133117 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 133058 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133057 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 132998 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| |||| || || ||||||||||||||||||||||||||||| Sbjct: 132997 ttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttg 132938 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 132937 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 132878 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132877 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 132818 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 132817 acaggtgaatattcctgtactaccccttgttggt 132784 Score = 957 bits (483), Expect = 0.0 Identities = 552/574 (96%), Gaps = 1/574 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104615 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 104674 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 104675 aatactagatatgacccaaaaatcacaggg-tcaaggtcggccagtgagacgatggggga 104733 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104734 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 104793 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||| Sbjct: 104794 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagccgcca 104853 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 104854 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 104913 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104914 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 104973 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| |||| || || ||||||||||||||||||||||||||||| Sbjct: 104974 ttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcgagaatgtcggcttg 105033 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 105034 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 105093 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105094 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 105153 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 105154 acaggtgaatattcctgtactaccccttgttggt 105187
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 131909 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 131850 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131849 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 131790 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 131789 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 131730 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 131729 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 131670 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 131669 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 131610 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 131609 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 131550 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 131549 ttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 131490 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 131489 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 131430 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131429 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 131370 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 131369 acaggtgaatattcctgtactaccccttgttggt 131336 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104969 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 105028 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105029 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 105088 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 105089 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 105148 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 105149 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 105208 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 105209 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 105268 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 105269 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 105328 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 105329 ttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 105388 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 105389 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 105448 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105449 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 105508 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 105509 acaggtgaatattcctgtactaccccttgttggt 105542
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 135035 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134976 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134975 aatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 134916 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134915 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 134856 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134855 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134796 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134795 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134736 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134735 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 134676 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| | ||| ||| | || ||||||||||||||||||||||||||||| Sbjct: 134675 ttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttg 134616 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134615 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134556 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134555 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134496 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 134495 acaggtgaatattcctgtactaccccttgttggt 134462 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106871 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106930 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106931 aatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 106990 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106991 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 107050 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 107051 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 107110 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107111 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 107170 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107171 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 107230 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| | ||| ||| | || ||||||||||||||||||||||||||||| Sbjct: 107231 ttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttg 107290 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107291 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107350 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107351 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107410 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 107411 acaggtgaatattcctgtactaccccttgttggt 107444
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 135726 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 135667 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135666 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 135607 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135606 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 135547 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 135546 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 135487 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135486 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 135427 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135426 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135367 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||| | ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 135366 ttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 135307 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 135306 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 135247 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135246 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 135187 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 135186 acaggtgaatattcctgtactaccccttgttggt 135153 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106699 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106758 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106759 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 106818 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106819 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106878 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106879 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106938 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106939 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106998 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106999 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107058 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||| | ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 107059 ttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 107118 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107119 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107178 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107179 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107238 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 107239 acaggtgaatattcctgtactaccccttgttggt 107272
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 135314 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 135255 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135254 aatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 135195 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135194 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 135135 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 135134 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 135075 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135074 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 135015 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135014 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 134955 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| | ||| ||| | || ||||||||||||||||||||||||||||| Sbjct: 134954 ttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttg 134895 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134894 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134835 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134834 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134775 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 134774 acaggtgaatattcctgtactaccccttgttggt 134741 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107093 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 107152 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107153 aatactagatatgatctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 107212 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107213 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 107272 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 107273 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 107332 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107333 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 107392 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107393 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 107452 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||||| | ||| ||| | || ||||||||||||||||||||||||||||| Sbjct: 107453 ttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcgagaatgtcggcttg 107512 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107513 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107572 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107573 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107632 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 107633 acaggtgaatattcctgtactaccccttgttggt 107666
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 131902 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 131843 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131842 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 131783 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 131782 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 131723 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 131722 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 131663 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 131662 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 131603 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 131602 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 131543 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 131542 ttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 131483 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 131482 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 131423 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131422 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 131363 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 131362 acaggtgaatattcctgtactaccccttgttggt 131329 Score = 950 bits (479), Expect = 0.0 Identities = 550/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104967 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 105026 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105027 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 105086 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 105087 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 105146 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 105147 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 105206 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 105207 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 105266 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 105267 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 105326 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 105327 ttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcgagaatgtcggcttg 105386 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 105387 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 105446 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105447 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 105506 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 105507 acaggtgaatattcctgtactaccccttgttggt 105540
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 944 bits (476), Expect = 0.0 Identities = 553/579 (95%), Gaps = 5/579 (0%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 138719 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 138660 Query: 61 aatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatg 115 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138659 aatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatg 138600 Query: 116 ggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaat 175 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138599 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 138540 Query: 176 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 235 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 138539 gaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagc 138480 Query: 236 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 295 |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 138479 agccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatga 138420 Query: 296 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 355 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 138419 acggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgtt 138360 Query: 356 ccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 415 ||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||||| Sbjct: 138359 ccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcg 138300 Query: 416 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 475 |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 138299 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccg 138240 Query: 476 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138239 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 138180 Query: 536 ggacaacaggtcaatattcctgtactaccccttgttggt 574 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 138179 ggacaacaggtgaatattcctgtactaccccttgttggt 138141 Score = 944 bits (476), Expect = 0.0 Identities = 553/579 (95%), Gaps = 5/579 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 111226 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 111285 Query: 61 aatactagatatgaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatg 115 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 111286 aatactagatatgaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatg 111345 Query: 116 ggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaat 175 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111346 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 111405 Query: 176 gaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagc 235 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 111406 gaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagc 111465 Query: 236 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 295 |||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 111466 agccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatga 111525 Query: 296 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgtt 355 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 111526 acggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgtt 111585 Query: 356 ccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 415 ||||||||||| |||||| ||||| ||| || || |||||||||||||||||||||||| Sbjct: 111586 ccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcg 111645 Query: 416 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 475 |||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 111646 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccg 111705 Query: 476 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111706 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 111765 Query: 536 ggacaacaggtcaatattcctgtactaccccttgttggt 574 ||||||||||| ||||||||||||||||||||||||||| Sbjct: 111766 ggacaacaggtgaatattcctgtactaccccttgttggt 111804 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 485 tccacggagggtgagtcagggcct 508 |||||||||||||||||||||||| Sbjct: 144327 tccacggagggtgagtcagggcct 144304 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 485 tccacggagggtgagtcagggcct 508 |||||||||||||||||||||||| Sbjct: 105618 tccacggagggtgagtcagggcct 105641
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 942 bits (475), Expect = 0.0 Identities = 549/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 867 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 926 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacgatggggga 986 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 987 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1046 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1047 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 1106 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1107 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1166 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct: 1167 gctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgcc 1226 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||| | ||| ||| | ||| ||||||||||||||||||||||||||||| Sbjct: 1227 ttagggggaagcacctgcgcgagcagcggtagacgaagcggaagcgagaatgtcggcttg 1286 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1287 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 1346 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1347 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 1406 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 1407 acaggtgaatattcctgtactgccccttgttggt 1440
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 134680 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134621 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134620 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 134561 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134560 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 134501 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134500 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134441 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134440 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134381 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134380 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134321 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134320 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 134261 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134260 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134201 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134200 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134141 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 134140 acaggtgaatattcctgtactaccccttgtt 134110 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106356 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106415 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106416 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 106475 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106476 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106535 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106536 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106595 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106596 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106655 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106656 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106715 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 106716 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 106775 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 106776 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 106835 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106836 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 106895 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 106896 acaggtgaatattcctgtactaccccttgtt 106926
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 134815 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134756 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134755 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 134696 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134695 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 134636 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134635 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134576 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134575 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134516 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134515 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134456 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134455 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 134396 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134395 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134336 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134335 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134276 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 134275 acaggtgaatattcctgtactaccccttgtt 134245 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106528 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106587 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106588 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 106647 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106648 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106707 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106708 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106767 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106768 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106827 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106828 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106887 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 106888 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 106947 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 106948 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107007 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107008 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107067 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 107068 acaggtgaatattcctgtactaccccttgtt 107098
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 134813 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134754 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134753 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 134694 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134693 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 134634 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134633 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134574 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134573 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134514 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134513 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134454 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134453 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 134394 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134393 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134334 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134333 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134274 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 134273 acaggtgaatattcctgtactaccccttgtt 134243 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106525 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106584 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106585 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 106644 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106645 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106704 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106705 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106764 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106765 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106824 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106825 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106884 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 106885 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 106944 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 106945 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107004 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107005 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107064 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 107065 acaggtgaatattcctgtactaccccttgtt 107095
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 134725 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134666 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134665 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 134606 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134605 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 134546 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134545 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134486 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134485 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134426 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134425 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134366 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134365 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 134306 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134305 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134246 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134245 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134186 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 134185 acaggtgaatattcctgtactaccccttgtt 134155 Score = 936 bits (472), Expect = 0.0 Identities = 546/571 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106403 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106462 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106463 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 106522 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106523 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106582 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106583 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106642 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106643 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106702 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106703 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106762 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 106763 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 106822 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 106823 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 106882 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106883 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 106942 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 106943 acaggtgaatattcctgtactaccccttgtt 106973
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 135434 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 135375 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135374 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 135315 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 135314 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 135255 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 135254 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 135195 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135194 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 135135 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135134 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135075 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 135074 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 135015 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 135014 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134955 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134954 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134895 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 134894 acaggtgaatattcctgtactgccccttgttggt 134861 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107196 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 107255 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107256 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 107315 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 107316 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 107375 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 107376 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 107435 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107436 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 107495 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107496 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107555 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 107556 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 107615 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107616 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107675 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107676 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107735 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 107736 acaggtgaatattcctgtactgccccttgttggt 107769
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 136072 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 136013 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 136012 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 135953 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135952 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 135893 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 135892 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 135833 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135832 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 135773 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135772 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135713 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||| || ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 135712 ttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 135653 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 135652 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 135593 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135592 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 135533 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 135532 acaggtgaatattcctgtactgccccttgttggt 135499 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107485 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 107544 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107545 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 107604 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107605 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 107664 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 107665 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 107724 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107725 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 107784 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107785 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107844 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||| || ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 107845 ttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 107904 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107905 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107964 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107965 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 108024 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 108025 acaggtgaatattcctgtactgccccttgttggt 108058
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 142013 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 141954 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 141953 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 141894 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 141893 taagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 141834 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141833 ctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagcca 141774 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 141773 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 141714 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 141713 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 141654 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 141653 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 141594 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 141593 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 141534 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141533 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 141474 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 141473 acaggtgaatattcctgtactgccccttgttggt 141440 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 111315 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 111374 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 111375 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 111434 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 111435 taagcttgatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 111494 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111495 ctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagcca 111554 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 111555 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 111614 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 111615 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 111674 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 111675 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 111734 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 111735 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 111794 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111795 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 111854 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 111855 acaggtgaatattcctgtactgccccttgttggt 111888
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 2390 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 2449 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2450 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 2509 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 2510 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 2569 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2570 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 2629 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 2630 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 2689 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 2690 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 2749 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 2750 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 2809 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 2810 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 2869 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2870 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 2929 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 2930 acaggtgaatattcctgtactgccccttgttggt 2963
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 135432 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 135373 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135372 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 135313 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 135312 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 135253 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 135252 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 135193 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 135192 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 135133 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 135132 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 135073 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 135072 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 135013 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 135012 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134953 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134952 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134893 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 134892 acaggtgaatattcctgtactgccccttgttggt 134859 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107194 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 107253 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107254 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 107313 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 107314 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 107373 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 107374 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 107433 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107434 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 107493 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107494 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107553 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 107554 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 107613 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107614 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107673 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107674 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107733 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 107734 acaggtgaatattcctgtactgccccttgttggt 107767
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 135163 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 135104 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135103 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 135044 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 135043 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 134984 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134983 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134924 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134923 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134864 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134863 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134804 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134803 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 134744 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134743 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134684 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134683 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134624 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 134623 acaggtgaatattcctgtactgccccttgttggt 134590 Score = 934 bits (471), Expect = 0.0 Identities = 548/574 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106975 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 107034 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 107035 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 107094 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 107095 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 107154 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 107155 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 107214 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 107215 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 107274 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 107275 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 107334 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 107335 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 107394 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 107395 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 107454 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107455 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 107514 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 107515 acaggtgaatattcctgtactgccccttgttggt 107548
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 928 bits (468), Expect = 0.0 Identities = 545/571 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 134692 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134633 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 134632 aataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 134573 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134572 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 134513 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 134512 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 134453 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 134452 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 134393 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 134392 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 134333 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 134332 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 134273 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 134272 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 134213 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134212 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 134153 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 134152 acaggtgaatattcctgtactaccccttgtt 134122 Score = 928 bits (468), Expect = 0.0 Identities = 545/571 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106370 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106429 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 106430 aataatagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 106489 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106490 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106549 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106550 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106609 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106610 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106669 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 106670 gctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 106729 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 106730 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 106789 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 106790 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 106849 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106850 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 106909 Query: 541 acaggtcaatattcctgtactaccccttgtt 571 |||||| |||||||||||||||||||||||| Sbjct: 106910 acaggtgaatattcctgtactaccccttgtt 106940
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 918 bits (463), Expect = 0.0 Identities = 547/574 (95%), Gaps = 1/574 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 2636 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 2695 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 2696 aatactagatatgactcaaaa-taacaggggtcaaggtcggctagtgagacgatggggga 2754 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 2755 taagcttcatcgtcgagagggaaacagtccggatcaccagctaaggcccctaaatgaccg 2814 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2815 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 2874 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||| Sbjct: 2875 cccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagatgaacggg 2934 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 2935 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 2994 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 2995 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 3054 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 3055 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 3114 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3115 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 3174 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 3175 acaggtgaatattcctgtactgccccttgttggt 3208
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 918 bits (463), Expect = 0.0 Identities = 547/574 (95%), Gaps = 1/574 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 963 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 1022 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1023 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 1082 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 1083 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 1142 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1143 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 1202 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1203 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1262 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 1263 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 1322 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 1323 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtcggcttg 1382 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1383 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 1442 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1443 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc-tagtcgatggaca 1501 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||| |||||||||||| Sbjct: 1502 acaggtgaatattcctgtactgccccttgttggt 1535
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 910 bits (459), Expect = 0.0 Identities = 545/574 (94%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 129664 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 129605 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||| | ||||||||||||||||||||||||||| |||| Sbjct: 129604 aatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgaggga 129545 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 129544 taagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccg 129485 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 129484 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 129425 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 129424 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 129365 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 129364 gctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgcc 129305 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||| | ||||| ||| | ||| ||||||||||||||||||||||||||||| Sbjct: 129304 ttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggcttg 129245 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||| Sbjct: 129244 agtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctccgcaagg 129185 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129184 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 129125 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 129124 acaggtgaatattcctgtactaccccttgttggt 129091 Score = 910 bits (459), Expect = 0.0 Identities = 545/574 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 102792 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 102851 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||| | ||||||||||||||||||||||||||| |||| Sbjct: 102852 aatactagatatgacctgaaaataataagggtcaaggtcggccagtgagacgatgaggga 102911 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct: 102912 taagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgaccg 102971 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 102972 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 103031 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 103032 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 103091 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 103092 gctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtaggggagcgttccgcc 103151 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||| | ||||| ||| | ||| ||||||||||||||||||||||||||||| Sbjct: 103152 ttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcgagaatgtcggcttg 103211 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||| ||||||||||||||||||| |||||||| |||| ||||||||||||| Sbjct: 103212 agtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaagggttcctccgcaagg 103271 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103272 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 103331 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 103332 acaggtgaatattcctgtactaccccttgttggt 103365
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 902 bits (455), Expect = 0.0 Identities = 544/574 (94%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 131001 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 130942 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130941 aatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatggggga 130882 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 130881 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 130822 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 130821 ctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcca 130762 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 130761 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 130702 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 130701 gctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgcc 130642 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||| | ||||| ||| | | | ||||||||||||||||||||||||||||| Sbjct: 130641 ttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggcttg 130582 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 130581 agtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaagg 130522 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130521 ttcgtccacggagggtgagtcagggcctaagatcaggccgaagggcgtagtcgatggaca 130462 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||||||| |||||||| Sbjct: 130461 acaggtgaatattcctgtactaccctttgttggt 130428 Score = 902 bits (455), Expect = 0.0 Identities = 544/574 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104393 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 104452 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104453 aatactagatatgacctcaaaataacaagggtcaaggtcggccagtgagacgatggggga 104512 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 104513 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 104572 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| Sbjct: 104573 ctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcca 104632 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 104633 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 104692 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 104693 gctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtaggggagcgttccgcc 104752 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||||||||||| | ||||| ||| | | | ||||||||||||||||||||||||||||| Sbjct: 104753 ttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggcttg 104812 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| |||| ||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 104813 agtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaagg 104872 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104873 ttcgtccacggagggtgagtcagggcctaagatcaggccgaagggcgtagtcgatggaca 104932 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||||||| |||||||| Sbjct: 104933 acaggtgaatattcctgtactaccctttgttggt 104966
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 900 bits (454), Expect = 0.0 Identities = 456/457 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526505 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 33526564 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526565 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 33526624 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 33526625 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 33526684 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526685 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 33526744 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526745 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 33526804 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526805 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 33526864 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526865 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 33526924 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||||||||||||||||||||||||||||||||| Sbjct: 33526925 agtaacgaaaacattggtgagaatccaatgccccgaa 33526961 Score = 349 bits (176), Expect = 6e-93 Identities = 205/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 122 aagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgc 181 |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 182 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 241 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 242 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 302 ctaagcgatctgccgaagctgtgggatgtcaaaat 336 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Minus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 462 caaggtttcctccgcaaggttcgtcca 488 || |||||||||||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 269 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 310 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 338 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 397 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 398 gcggaagcgagaatgtcggcttgagtaac 426 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 418 ttgagtaacgaaaacattggtgagaatc 445 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 511 gatcaggccgaaaggcgtag 530 |||||||||||||||||||| Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 900 bits (454), Expect = 0.0 Identities = 456/457 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71702 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 71761 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71762 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 71821 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 71822 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 71881 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71882 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 71941 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71942 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 72001 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72002 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 72061 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72062 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 72121 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||||||||||||||||||||||||||||||||| Sbjct: 72122 agtaacgaaaacattggtgagaatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 418 ttgagtaacgaaaacattggtgagaatc 445 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 898 bits (453), Expect = 0.0 Identities = 544/574 (94%), Gaps = 8/574 (1%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 134118 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 134059 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||| || ||| |||||||||||||||||||||||||||||||| Sbjct: 134058 aatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatggggga 134006 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134005 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 133946 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 133945 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 133886 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 133885 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 133826 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 133825 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-c 133767 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||| ||||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 133766 ttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 133707 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 133706 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 133647 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133646 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 133587 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 133586 acaggtgaatattcctgtactaccccttgttggt 133553 Score = 898 bits (453), Expect = 0.0 Identities = 544/574 (94%), Gaps = 8/574 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 106164 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 106223 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||| || ||| |||||||||||||||||||||||||||||||| Sbjct: 106224 aatactagatatgatcccaaa-------gggtcaaggtcggccagtgagacgatggggga 106276 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106277 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 106336 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 106337 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 106396 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 106397 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 106456 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 106457 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccg-c 106515 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||| ||||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 106516 ttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 106575 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 106576 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 106635 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106636 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 106695 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 106696 acaggtgaatattcctgtactaccccttgttggt 106729
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 880 bits (444), Expect = 0.0 Identities = 446/447 (99%) Strand = Plus / Plus Query: 118 ggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatga 177 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 178 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 238 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 298 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 358 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 418 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 478 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgg 420 Query: 538 acaacaggtcaatattcctgtactacc 564 ||||||||||||||||||||||||||| Sbjct: 421 acaacaggtcaatattcctgtactacc 447
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 872 bits (440), Expect = 0.0 Identities = 542/575 (94%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 928 Query: 61 aatactagatatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatggggg 119 |||||||||||||| || |||||||||||| | |||||| ||||||||||| |||||| Sbjct: 929 aatactagatatgatccccaaataacaggggataaaggtcaaccagtgagacggtggggg 988 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 989 ataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgacc 1048 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1049 gctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 1108 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct: 1109 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgg 1168 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1169 gactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgc 1228 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 |||||||||||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 1229 cttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 1288 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1289 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1348 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1349 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 1408 Query: 540 aacaggtcaatattcctgtactaccccttgttggt 574 ||||||| ||||||||||||||||||||||||||| Sbjct: 1409 aacaggtgaatattcctgtactaccccttgttggt 1443
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 872 bits (440), Expect = 0.0 Identities = 539/571 (94%), Gaps = 1/571 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 1361 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 1420 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg- 119 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 aatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggg 1480 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1481 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 1540 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1541 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1600 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1601 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 1660 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1661 ggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgt 1720 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 |||| |||||||| | ||| ||| | |||||||||||||||||||||||||||| Sbjct: 1721 gttagggggaagcatcggcgcgagccatgccagacgaagcggaagcgagaatgtcggctt 1780 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1781 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1840 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1841 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 1900 Query: 540 aacaggtcaatattcctgtactaccccttgt 570 ||||||| ||||||||||||||||||||||| Sbjct: 1901 aacaggtgaatattcctgtactaccccttgt 1931
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 870 bits (439), Expect = 0.0 Identities = 492/510 (96%) Strand = Plus / Minus Query: 69 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 128 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 129 atcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtga 188 ||| || || |||||||||||| || ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 189 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 248 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 249 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 309 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 369 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 428 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 429 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 221 Query: 489 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 161 Query: 549 atattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||| Sbjct: 160 atattcctgtactaccccttgttggtacgg 131
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 864 bits (436), Expect = 0.0 Identities = 438/439 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 730 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 790 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 791 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 850 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 910 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 970 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 1030 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 1090 Query: 421 agtaacgaaaacattggtg 439 ||||||||||||||||||| Sbjct: 1091 agtaacgaaaacattggtg 1109
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 856 bits (432), Expect = 0.0 Identities = 541/575 (94%), Gaps = 2/575 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 883 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 942 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 943 aatactagatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatggggga 1002 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||| | ||||| |||||||||||||||||| || Sbjct: 1003 taagcttcatcgtcgagagggaaacagccctgatcacccgctaaggcccctaaatgatcg 1062 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||| Sbjct: 1063 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc-tataagcagcca 1121 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1122 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1181 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||| | Sbjct: 1182 gctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggtaggggagcgttccgtc 1241 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||| |||||||| | ||| ||| | ||| ||||||||||||||||||||||||||||| Sbjct: 1242 ttagggggaagcacctgcgcgagcagtggtagacgaagcggaagcgagaatgtcggcttg 1301 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1302 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 1361 Query: 481 ttcgtccacgg-agggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1362 ttcgtccacggtagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 1421 Query: 540 aacaggtcaatattcctgtactaccccttgttggt 574 ||||||| |||||||||||||| |||||||||||| Sbjct: 1422 aacaggtgaatattcctgtactgccccttgttggt 1456
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 848 bits (428), Expect = 0.0 Identities = 539/575 (93%), Gaps = 1/575 (0%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 117280 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 117221 Query: 61 aatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatggggg 119 |||||||||||||| || |||||| ||||| || |||| ||||||||||| |||||| Sbjct: 117220 aatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtggggg 117161 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 117160 ataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgacc 117101 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 117100 gctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 117041 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct: 117040 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgg 116981 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 116980 gactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgc 116921 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 |||||||||||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 116920 cttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 116861 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 116860 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 116801 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116800 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 116741 Query: 540 aacaggtcaatattcctgtactaccccttgttggt 574 ||||||| ||||||||||||||||||||||||||| Sbjct: 116740 aacaggtgaatattcctgtactaccccttgttggt 116706 Score = 848 bits (428), Expect = 0.0 Identities = 539/575 (93%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 90822 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 90881 Query: 61 aatactagatatgacccaaaaataacaggggtcaa-ggtcggccagtgagacgatggggg 119 |||||||||||||| || |||||| ||||| || |||| ||||||||||| |||||| Sbjct: 90882 aatactagatatgatccccaaataatagggggtaatggtcaaccagtgagacggtggggg 90941 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||| ||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 90942 ataagcttcatcgtcaagagggaaacagcccagatcaccagctaaggcccctaaatgacc 91001 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 91002 gctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 91061 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct: 91062 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgg 91121 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 91122 gactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgc 91181 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 |||||||||||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 91182 cttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 91241 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 91242 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 91301 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91302 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 91361 Query: 540 aacaggtcaatattcctgtactaccccttgttggt 574 ||||||| ||||||||||||||||||||||||||| Sbjct: 91362 aacaggtgaatattcctgtactaccccttgttggt 91396
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 842 bits (425), Expect = 0.0 Identities = 543/583 (93%), Gaps = 16/583 (2%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 139494 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 139435 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||| || || |||| ||||||||||||||||||||||||||||||| Sbjct: 139434 aatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggga 139382 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 139381 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 139322 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 139321 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 139262 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 139261 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 139202 Query: 301 gctaagcgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcg 353 |||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 139201 gctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcg 139142 Query: 354 ttccgccttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaat 411 |||||||||||||||||||| ||||| ||| | | || |||||||||||||||||||| Sbjct: 139141 ttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaat 139082 Query: 412 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 471 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 139081 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 139022 Query: 472 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139021 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 138962 Query: 532 cgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 138961 cgatgggcaacaggtgaatattcctgtactaccccttgttggt 138919 Score = 842 bits (425), Expect = 0.0 Identities = 543/583 (93%), Gaps = 16/583 (2%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 110566 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 110625 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||| || || |||| ||||||||||||||||||||||||||||||| Sbjct: 110626 aatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggga 110678 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 110679 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 110738 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 110739 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 110798 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 110799 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 110858 Query: 301 gctaagcgatctgccgaagctgtgggat-------gtcaaaatgcatcggtaggggagcg 353 |||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 110859 gctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcatcggtaggggagcg 110918 Query: 354 ttccgccttagagggaagcaaccgcgaaagc--gggggtcgacgaagcggaagcgagaat 411 |||||||||||||||||||| ||||| ||| | | || |||||||||||||||||||| Sbjct: 110919 ttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaagcggaagcgagaat 110978 Query: 412 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 471 |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 110979 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 111038 Query: 472 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111039 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 111098 Query: 532 cgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 111099 cgatgggcaacaggtgaatattcctgtactaccccttgttggt 111141
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 811 bits (409), Expect = 0.0 Identities = 534/574 (93%), Gaps = 4/574 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| Sbjct: 87132 ggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctg 87191 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||| || ||| ||||| |||||| | |||| ||||||||||||||||||| Sbjct: 87192 aatactagat-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatggggga 87247 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| Sbjct: 87248 taagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccg 87307 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||||| ||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 87308 ctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagcca 87367 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 87368 accttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 87427 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 87428 actaagcgatctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgcc 87487 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 | |||| |||||| | ||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 87488 tcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 87547 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 87548 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 87607 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87608 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 87667 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 87668 acaggtgaatattcctgtactaccccttgttggt 87701
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 811 bits (409), Expect = 0.0 Identities = 536/576 (93%), Gaps = 2/576 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 928 Query: 61 aatactagatatgacccaaaaataacaggggtcaagg-tcggccagtgagacgatggggg 119 |||||||||||||| | |||||| |||| |||| || ||||||||||| |||||| Sbjct: 929 aatactagatatgatctccgaataacgggggataagggtcaaccagtgagacggtggggg 988 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 989 ataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgacc 1048 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1049 gctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 1108 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||||| Sbjct: 1109 acccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgg 1168 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 | ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1169 gactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgc 1228 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 ||||| |||||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 1229 cttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagcgagaatgtcggctt 1288 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1289 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1348 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1349 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 1408 Query: 540 aacaggtcaatattcctgtacta-ccccttgttggt 574 ||||||| ||||||||||||| | |||||||||||| Sbjct: 1409 aacaggtgaatattcctgtaccacccccttgttggt 1444
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 799 bits (403), Expect = 0.0 Identities = 483/510 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 863 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 922 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 923 aatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatggggga 982 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 983 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1042 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1043 ctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcagcca 1102 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1103 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1162 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 1163 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccgcc 1222 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||| ||||||||||||||| ||| |||| |||||||||||||||| |||||| ||||| Sbjct: 1223 ttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagcgaaaatgtccgcttg 1282 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||| |||||||| |||| | |||| ||||||||||||| Sbjct: 1283 agtaacgcaaacattggtgagaatctaatgcccccaaaaactaagggttcctccgcaagg 1342 Query: 481 ttcgtccacggagggtgagtcagggcctaa 510 |||||||||||||||||||||| ||||||| Sbjct: 1343 ttcgtccacggagggtgagtcaaggcctaa 1372
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 799 bits (403), Expect = 0.0 Identities = 540/580 (93%), Gaps = 12/580 (2%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 327 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 386 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 387 aatactagatatgacctcaaaataacaggggtcaaggtcggctagtgagacgatggggga 446 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 447 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgatcg 506 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 507 ctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgcctagaagcagcca 565 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 566 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 625 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 626 gctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 685 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 |||||| ||||| ||||| ||||| ||| ||||||||||||||||||||||| | || Sbjct: 686 ttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaatgtc-acgtg 744 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||| | ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 745 agt---gcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 801 Query: 481 ttcgtccacggagggtgagtcagggcctaa----ga--tcaggccgaaaggcgtagtcga 534 |||||||||||||||||||||||||||||| || ||| |||||||||||||||||| Sbjct: 802 ttcgtccacggagggtgagtcagggcctaaacgtgacgtca-gccgaaaggcgtagtcga 860 Query: 535 tggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||| |||||||||||||| |||||||||||| Sbjct: 861 tggacaacaggtgaatattcctgtactgccccttgttggt 900
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 797 bits (402), Expect = 0.0 Identities = 529/569 (92%), Gaps = 2/569 (0%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 51820 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 51761 Query: 61 aatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 119 ||||||||| ||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct: 51760 aatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatggggg 51701 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 51700 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatc 51641 Query: 180 gctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagc 238 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 51640 gctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagc 51581 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 ||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||| Sbjct: 51580 cacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacg 51521 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 51520 gggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccg 51461 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 |||||||||||||| | || ||| | ||| ||||||||||||||||||||||||||| Sbjct: 51460 ccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggct 51401 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 51400 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 51341 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 51340 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcaatgga 51281 Query: 539 caacaggtcaatattcctgtactacccct 567 |||||||| |||||||||||||||||||| Sbjct: 51280 caacaggtgaatattcctgtactacccct 51252 Score = 797 bits (402), Expect = 0.0 Identities = 529/569 (92%), Gaps = 2/569 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 38008 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 38067 Query: 61 aatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 119 ||||||||| ||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct: 38068 aatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatggggg 38127 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 38128 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatc 38187 Query: 180 gctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagc 238 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 38188 gctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagc 38247 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 ||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||| Sbjct: 38248 cacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacg 38307 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 38308 gggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccg 38367 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 |||||||||||||| | || ||| | ||| ||||||||||||||||||||||||||| Sbjct: 38368 ccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggct 38427 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 38428 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 38487 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 38488 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcaatgga 38547 Query: 539 caacaggtcaatattcctgtactacccct 567 |||||||| |||||||||||||||||||| Sbjct: 38548 caacaggtgaatattcctgtactacccct 38576
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 797 bits (402), Expect = 0.0 Identities = 529/569 (92%), Gaps = 2/569 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 4936 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 4995 Query: 61 aatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 119 ||||||||| ||||||| | |||||| |||||| |||||||||||||||||||||||||| Sbjct: 4996 aatactagaatatgacctacaaataataggggtaaaggtcggccagtgagacgatggggg 5055 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct: 5056 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaattgatc 5115 Query: 180 gctcagtgataaaggaggtg-ggggtgcaaagacagccaggaggtttgcctagaagcagc 238 ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 5116 gctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagc 5175 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 ||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| ||||||| Sbjct: 5176 cacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacg 5235 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 |||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5236 gggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggagcgttccg 5295 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 |||||||||||||| | || ||| | ||| ||||||||||||||||||||||||||| Sbjct: 5296 ccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaatgtcggct 5355 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 5356 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaa 5415 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5416 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcaatgga 5475 Query: 539 caacaggtcaatattcctgtactacccct 567 |||||||| |||||||||||||||||||| Sbjct: 5476 caacaggtgaatattcctgtactacccct 5504
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 787 bits (397), Expect = 0.0 Identities = 399/400 (99%) Strand = Plus / Minus Query: 113 atgggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggccccta 172 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 173 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 233 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 293 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 353 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 413 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 473 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 512 |||||||||||||||||||||||||||||||||||||||| Sbjct: 63529 ccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 777 bits (392), Expect = 0.0 Identities = 530/574 (92%), Gaps = 3/574 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 89218 ggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctg 89277 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||| |||| || | || ||||| | |||| ||||||||||||||||||| Sbjct: 89278 aatactagatt--accccaataaaag-ggggtaagggtcaaccagtgagacgatggggga 89334 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| Sbjct: 89335 taagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgaccg 89394 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||||| ||||| || | |||||||||||||||||||||||||||||||||||||| Sbjct: 89395 ctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgcctagaagcagcca 89454 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||| Sbjct: 89455 accttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagatgaacggg 89514 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 89515 actaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggggagcgttccgcc 89574 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 | ||||||||||| | ||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 89575 tcagagggaagcaccggcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 89634 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 89635 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 89694 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89695 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 89754 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| ||||||||||||||||||||||||||| Sbjct: 89755 acaggtgaatattcctgtactaccccttgttggt 89788
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 769 bits (388), Expect = 0.0 Identities = 534/580 (92%), Gaps = 6/580 (1%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 145690 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 145631 Query: 61 aatactagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacgat 114 |||||||| ||||| | |||| || |||||| ||| |||||| |||||||||||| | Sbjct: 145630 aatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggt 145571 Query: 115 gggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaa 174 ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| Sbjct: 145570 gggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 145511 Query: 175 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 234 ||||||||||||| | |||||||| || ||||| |||||||||||| ||||||||||||| Sbjct: 145510 tgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaag 145451 Query: 235 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 294 ||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||| Sbjct: 145450 cagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatg 145391 Query: 295 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 354 |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 145390 aacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgt 145331 Query: 355 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 414 ||||||||||||||||||| | ||| ||| || || ||| ||||||||||||||||||| Sbjct: 145330 tccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgtc 145271 Query: 415 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctcc 474 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 145270 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctcc 145211 Query: 475 gcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcga 534 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 145210 gcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaaggcgtagttga 145151 Query: 535 tggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||| ||||||||||||||||||||||||||| Sbjct: 145150 tggacaacaggtgaatattcctgtactaccccttgttggt 145111 Score = 769 bits (388), Expect = 0.0 Identities = 534/580 (92%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 112772 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 112831 Query: 61 aatactagatatgacc--caaa---aataacagg-ggtcaaggtcggccagtgagacgat 114 |||||||| ||||| | |||| || |||||| ||| |||||| |||||||||||| | Sbjct: 112832 aatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggt 112891 Query: 115 gggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaa 174 ||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||| Sbjct: 112892 gggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaa 112951 Query: 175 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 234 ||||||||||||| | |||||||| || ||||| |||||||||||| ||||||||||||| Sbjct: 112952 tgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtttgcctagaag 113011 Query: 235 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 294 ||||||||||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||| Sbjct: 113012 cagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatg 113071 Query: 295 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 354 |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 113072 aacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggagcgt 113131 Query: 355 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 414 ||||||||||||||||||| | ||| ||| || || ||| ||||||||||||||||||| Sbjct: 113132 tccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaatgtc 113191 Query: 415 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctcc 474 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 113192 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctcc 113251 Query: 475 gcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcga 534 ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || Sbjct: 113252 gcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaaggcgtagttga 113311 Query: 535 tggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||| ||||||||||||||||||||||||||| Sbjct: 113312 tggacaacaggtgaatattcctgtactaccccttgttggt 113351
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 767 bits (387), Expect = 0.0 Identities = 534/581 (91%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||| |||||||| | | ||||||||||||||||| |||||||||| Sbjct: 865 ggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctg 924 Query: 61 aatactaga-tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggg 119 ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 925 aatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgagacgatggggg 984 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||| | Sbjct: 985 ataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccctaattgatc 1044 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 1045 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 1104 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| ||| |||||||||||||| ||||||||||||| ||||||| |||||| ||||| Sbjct: 1105 acccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccgaagattaacgg 1164 Query: 300 ggctaagcgatctgccgaagctgtgggatg------tcaaaatgcatcggtaggggagcg 353 |||||||||||| ||||||||||||||||| | ||||| |||||||||||||||| Sbjct: 1165 ggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacatcggtaggggagcg 1224 Query: 354 ttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgt 413 ||||||||||||||||||| | || ||| | ||| |||||| ||||||||||||||| Sbjct: 1225 ttccgccttagagggaagcctctgcacgagcagcggtggacgaaacggaagcgagaatgt 1284 Query: 414 cggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctc 473 |||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1285 cggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctc 1344 Query: 474 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 533 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1345 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaacg-gtagtcg 1403 Query: 534 atggacaacaggtcaatattcctgtactaccccttgttggt 574 |||| |||||||| |||||| |||||||||||||||||||| Sbjct: 1404 atgggcaacaggtgaatatttctgtactaccccttgttggt 1444
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 765 bits (386), Expect = 0.0 Identities = 389/390 (99%) Strand = Plus / Plus Query: 189 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 249 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 309 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 369 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 429 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtcca 300 Query: 489 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtca 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 cggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacgggtca 360 Query: 549 atattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||| Sbjct: 361 atattcctgtactaccccttgttggtacgg 390
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 745 bits (376), Expect = 0.0 Identities = 526/575 (91%), Gaps = 1/575 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 873 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 932 Query: 61 aatactagatatgacccaaaaataacaggg-gtcaaggtcggccagtgagacgatggggg 119 |||||| |||| ||| | ||||| || | || | |||| |||||||||| |||||| Sbjct: 933 aatactggataggactccctaataatagagagtaagggtcaaccagtgagacagtggggg 992 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||| |||||||||| |||||||| | ||||| |||||||||||||||||||| Sbjct: 993 ataagcttcattgtcgagaggggaacagcccagatcaccggctaaggcccctaaatgacc 1052 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||| |||| |||||||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1053 gctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcc 1112 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 | |||| |||||||||||||||||||||||||| ||||| ||||||| ||||||||| || Sbjct: 1113 atccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaatgg 1172 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1173 gactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtaggggagcgttccgc 1232 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 ||||| | |||||| | ||| ||| || || |||||||||||||||||||||||||||| Sbjct: 1233 cttagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggctt 1292 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1293 gagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaag 1352 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1353 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 1412 Query: 540 aacaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||||||||||| |||| Sbjct: 1413 aacaggcgaatattcctgtactaccccttgctggt 1447
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 743 bits (375), Expect = 0.0 Identities = 452/478 (94%) Strand = Plus / Plus Query: 97 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntca 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 157 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 216 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 217 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 276 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 277 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 336 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 337 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 396 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 397 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 456 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 457 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 516 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5542 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 5601 Query: 517 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 5602 gccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggt 5659 Score = 119 bits (60), Expect = 1e-23 Identities = 69/72 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| Sbjct: 5096 ggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctg 5155 Query: 61 aatactagatat 72 |||||||||||| Sbjct: 5156 aatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 743 bits (375), Expect = 0.0 Identities = 452/478 (94%) Strand = Plus / Minus Query: 97 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntca 156 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 157 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 216 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 217 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 276 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 277 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 336 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 337 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 396 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 397 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 456 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 457 aaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 516 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22383 aaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcag 22324 Query: 517 gccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 22323 gccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactacctcttgttggt 22266 Score = 119 bits (60), Expect = 1e-23 Identities = 69/72 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| Sbjct: 22829 ggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctg 22770 Query: 61 aatactagatat 72 |||||||||||| Sbjct: 22769 aatactagatat 22758
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 737 bits (372), Expect = 0.0 Identities = 459/487 (94%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 89 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 147 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 148 cccggntcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 207 ||| | |||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 208 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 267 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 268 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 327 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 328 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 387 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 388 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 447 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 448 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 507 |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacc 5864 Query: 508 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 567 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 5865 taagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgcccct 5924 Query: 568 tgttggt 574 ||||||| Sbjct: 5925 tgttggt 5931 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| Sbjct: 5364 ggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctg 5423 Query: 61 aatactagatatgaccc 77 ||||||||||||||||| Sbjct: 5424 aatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 737 bits (372), Expect = 0.0 Identities = 459/487 (94%), Gaps = 1/487 (0%) Strand = Plus / Plus Query: 89 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 147 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 148 cccggntcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 207 ||| | |||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 208 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 267 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 268 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 327 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 328 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 387 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 388 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 447 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 448 atgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcc 507 |||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| || Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaaggttcgtccacggagggtaagtcaggacc 5864 Query: 508 taagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccct 567 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 5865 taagatcaggccgaaaggcgtagtcgatggacaacaggttaatattcctgtactgcccct 5924 Query: 568 tgttggt 574 ||||||| Sbjct: 5925 tgttggt 5931 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||| Sbjct: 5364 ggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctg 5423 Query: 61 aatactagatatgaccc 77 ||||||||||||||||| Sbjct: 5424 aatactagatatgaccc 5440
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 728 bits (367), Expect = 0.0 Identities = 369/370 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 549 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 609 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 610 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 669 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 670 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 729 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 789 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 790 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 849 Query: 361 ttagagggaa 370 |||||||||| Sbjct: 850 ttagagggaa 859
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 720 bits (363), Expect = 0.0 Identities = 521/574 (90%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 127572 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 127513 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||| |||||||| || ||| ||| | |||| ||||||||||||||||||| Sbjct: 127512 aatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatggggga 127453 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||| | Sbjct: 127452 taagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactg 127393 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 127392 ctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcca 127333 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| Sbjct: 127332 cccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacggg 127273 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 127272 actaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgta 127213 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 | ||| |||||| ||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 127212 tcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 127153 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 127152 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 127093 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127092 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 127033 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||||| |||||||||| Sbjct: 127032 acaggtgaatattcctgtactactccttgttggt 126999 Score = 720 bits (363), Expect = 0.0 Identities = 521/574 (90%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 95875 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 95934 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||| |||||||| || ||| ||| | |||| ||||||||||||||||||| Sbjct: 95935 aatactaggtatgacccccgaagaacggggaaaagggtcaaccagtgagacgatggggga 95994 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||| |||||||||| |||||||| | ||||||||||||||||||||||||| | Sbjct: 95995 taagcttcattgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgactg 96054 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 96055 ctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgcctagaagcagcca 96114 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| Sbjct: 96115 cccttaaaagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacggg 96174 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||| | ||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 96175 actaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggagcgttccgta 96234 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 | ||| |||||| ||| ||| || || ||||||||||||||||||||||||||||| Sbjct: 96235 tcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaatgtcggcttg 96294 Query: 421 agtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 480 ||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 96295 agtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 96354 Query: 481 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96355 ttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggaca 96414 Query: 541 acaggtcaatattcctgtactaccccttgttggt 574 |||||| |||||||||||||||| |||||||||| Sbjct: 96415 acaggtgaatattcctgtactactccttgttggt 96448
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 706 bits (356), Expect = 0.0 Identities = 362/364 (99%) Strand = Plus / Minus Query: 215 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 275 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 334 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 335 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 394 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 395 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 454 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 455 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 514 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gaaaacccaaggtttcctccacaaggttcgtccacggagggtgagtcagggcctaagatc 20571 Query: 515 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20570 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 20511 Query: 575 acgg 578 |||| Sbjct: 20510 acgg 20507
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 702 bits (354), Expect = 0.0 Identities = 480/516 (93%), Gaps = 6/516 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 886 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 945 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 946 aatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatggggga 1005 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1006 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1065 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1066 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 1125 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1126 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1185 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1186 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 1245 Query: 361 ttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-aagcgagaatgtcggc 417 ||| | |||| || | |||||| |||| | |||||| ||| || | ||||||||||| Sbjct: 1246 ttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaaaccaagaatgtcggc 1305 Query: 418 ttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaacccaaggtttcctccg 475 |||||||||| |||||| |||||||||||| ||||||||||||||| || | ||||||| Sbjct: 1306 ttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaacctaaaggttcctccc 1365 Query: 476 c-aaggttcgtccacggagggtgagtcagggcctaa 510 | |||||||||||||||||||||||||| ||||||| Sbjct: 1366 caaaggttcgtccacggagggtgagtcaaggcctaa 1401
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 698 bits (352), Expect = 0.0 Identities = 438/467 (93%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5218 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5277 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5278 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 5324 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4758 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 4817 Query: 61 aatactagatatg 73 |||||||| |||| Sbjct: 4818 aatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 698 bits (352), Expect = 0.0 Identities = 438/467 (93%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1387 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1388 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 1434 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 927 Query: 61 aatactagatatg 73 |||||||| |||| Sbjct: 928 aatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 698 bits (352), Expect = 0.0 Identities = 438/467 (93%) Strand = Plus / Minus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149917 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 149858 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 149857 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 149811 Score = 698 bits (352), Expect = 0.0 Identities = 438/467 (93%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 118808 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118809 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 118855 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 150377 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 150318 Query: 61 aatactagatatg 73 |||||||| |||| Sbjct: 150317 aatactaggtatg 150305 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 118289 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 118348 Query: 61 aatactagatatg 73 |||||||| |||| Sbjct: 118349 aatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 698 bits (352), Expect = 0.0 Identities = 438/467 (93%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| | || Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 1387 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1388 ggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtacta 1434 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 927 Query: 61 aatactagatatg 73 |||||||| |||| Sbjct: 928 aatactaggtatg 940
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 684 bits (345), Expect = 0.0 Identities = 429/455 (94%), Gaps = 3/455 (0%) Strand = Plus / Plus Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 300 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 359 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 360 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 419 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 420 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 479 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 480 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggac 539 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 616 gttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cgtagtcgatggac 673 Query: 540 aacaggtcaatattcctgtactaccccttgttggt 574 ||||||| |||||||||||||||||| |||||||| Sbjct: 674 aacaggtgaatattcctgtactaccctttgttggt 708
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 682 bits (344), Expect = 0.0 Identities = 446/479 (93%), Gaps = 1/479 (0%) Strand = Plus / Minus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| | || Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114887 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 114828 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114827 ggccgaaaggcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggt 114769 Score = 682 bits (344), Expect = 0.0 Identities = 446/479 (93%), Gaps = 1/479 (0%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| | || Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87233 aaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 87292 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87293 ggccgaaaggcgtagtcgatggacaacaggcaaatattcctgtactaccccttgttggt 87351 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 115342 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 115283 Query: 61 aatactag 68 |||||||| Sbjct: 115282 aatactag 115275 Score = 127 bits (64), Expect = 4e-26 Identities = 67/68 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 86778 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 86837 Query: 61 aatactag 68 |||||||| Sbjct: 86838 aatactag 86845
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 670 bits (338), Expect = 0.0 Identities = 439/473 (92%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 341 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1314 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1315 taagggttcctctgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaa 1374 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1375 aaggcgtagtcgatggacaacaggcgaatattcctgtactaccccttgttggt 1427 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 855 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 914 Query: 61 aatactagata 71 |||||| |||| Sbjct: 915 aatactggata 925
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 654 bits (330), Expect = 0.0 Identities = 333/334 (99%) Strand = Plus / Plus Query: 245 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 305 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 365 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 425 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcg 240 Query: 485 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacag 544 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgacggacaacag 300 Query: 545 gtcaatattcctgtactaccccttgttggtacgg 578 |||||||||||||||||||||||||||||||||| Sbjct: 301 gtcaatattcctgtactaccccttgttggtacgg 334
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 650 bits (328), Expect = 0.0 Identities = 518/579 (89%), Gaps = 7/579 (1%) Strand = Plus / Minus Query: 3 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 62 |||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 138397 ggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaa 138338 Query: 63 tactagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatggggga 120 |||| | |||| ||| | | | ||| | ||| ||||||||||||||||||| ||||||| Sbjct: 138337 tactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtggggga 138278 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||| ||||||||||| |||||||| | |||||||||||||||||| |||||||| Sbjct: 138277 taagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccg 138218 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||| Sbjct: 138217 ctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagcca 138158 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| Sbjct: 138157 cccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacggg 138098 Query: 301 gctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccg 358 ||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 138097 actaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccg 138038 Query: 359 cct---tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 415 ||| |||||||||| | ||| ||| || | |||||||||||||||||| ||||| Sbjct: 138037 cctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcg 137978 Query: 416 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 475 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 137977 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccg 137918 Query: 476 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 535 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 137917 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgagaggcgtagtcgat 137858 Query: 536 ggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||| |||||||||||||||||| | |||||| Sbjct: 137857 ggacaacaggcgaatattcctgtactacccatcgttggt 137819 Score = 650 bits (328), Expect = 0.0 Identities = 518/579 (89%), Gaps = 7/579 (1%) Strand = Plus / Plus Query: 3 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 62 |||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||| Sbjct: 83480 ggtaaagcactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaa 83539 Query: 63 tactagatatgacccaaaaataacagg--ggtcaaggtcggccagtgagacgatggggga 120 |||| | |||| ||| | | | ||| | ||| ||||||||||||||||||| ||||||| Sbjct: 83540 tactgggtatggccccagagtcacacgagggtgaaggtcggccagtgagacggtggggga 83599 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||| ||||||||||| |||||||| | |||||||||||||||||| |||||||| Sbjct: 83600 taagcttcaccgtcgagaggggaacagcccagatcaccagctaaggcccctgaatgaccg 83659 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 ||||||| | |||||||| || |||||||||||||| ||||||||||| ||||||||||| Sbjct: 83660 ctcagtggtgaaggaggtaggagtgcaaagacagccgggaggtttgcccagaagcagcca 83719 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| Sbjct: 83720 cccttgaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacggg 83779 Query: 301 gctaagcgatctgccgaagctgtgggatgtc--aaaatgcatcggtaggggagcgttccg 358 ||||||| |||||||||||||||||||||| | ||| ||||||||||||||||||||| Sbjct: 83780 actaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggggagcgttccg 83839 Query: 359 cct---tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcg 415 ||| |||||||||| | ||| ||| || | |||||||||||||||||| ||||| Sbjct: 83840 cctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcg 83899 Query: 416 gcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccg 475 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 83900 gcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaagggttcctccg 83959 Query: 476 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgat 535 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 83960 caaggttcgtccacggagggtgagtcagggcctaagatcaggccgagaggcgtagtcgat 84019 Query: 536 ggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||| |||||||||||||||||| | |||||| Sbjct: 84020 ggacaacaggcgaatattcctgtactacccatcgttggt 84058
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 646 bits (326), Expect = 0.0 Identities = 436/473 (92%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||||||| ||||||||||||| ||||||||||| |||||||| | |||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 341 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 145258 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145259 taagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccga 145318 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 145319 gaggcgtagttgatggacaacgggttaatattcccgtactgccccttgttggt 145371 Score = 646 bits (326), Expect = 0.0 Identities = 436/473 (92%) Strand = Plus / Minus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||||||| ||||||||||||| ||||||||||| |||||||| | |||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 341 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 87593 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87592 taagggttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccga 87533 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 ||||||||| |||||||||| ||| |||||||| ||||| |||||||||||| Sbjct: 87532 gaggcgtagttgatggacaacgggttaatattcccgtactgccccttgttggt 87480 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144791 ggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 144850 Query: 61 aatactagat 70 |||||||||| Sbjct: 144851 aatactagat 144860 Score = 115 bits (58), Expect = 2e-22 Identities = 67/70 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 88060 ggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 88001 Query: 61 aatactagat 70 |||||||||| Sbjct: 88000 aatactagat 87991
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 636 bits (321), Expect = e-179 Identities = 324/325 (99%) Strand = Plus / Plus Query: 254 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 314 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 374 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 434 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 493 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggag 240 Query: 494 ggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 553 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggtgagtcagggcctaggatcaggccgaaaggcgtagtcgatggacaacaggtcaatatt 300 Query: 554 cctgtactaccccttgttggtacgg 578 ||||||||||||||||||||||||| Sbjct: 301 cctgtactaccccttgttggtacgg 325
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 634 bits (320), Expect = e-179 Identities = 376/392 (95%), Gaps = 2/392 (0%) Strand = Plus / Plus Query: 183 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 242 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 243 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 302 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 303 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 362 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 363 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 422 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 423 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggtt 482 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggtt 298 Query: 483 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 542 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaac 358 Query: 543 aggtcaatattcctgtactaccccttgttggt 574 ||| ||||||||||||||||||||||||||| Sbjct: 359 aggcgaatattcctgtactaccccttgttggt 390
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 611 bits (308), Expect = e-171 Identities = 467/514 (90%), Gaps = 6/514 (1%) Strand = Plus / Plus Query: 2 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 61 |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 887 gggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctga 946 Query: 62 atactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggat 121 |||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 947 atactaaatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggat 1006 Query: 122 aagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgc 181 ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1007 aagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 1066 Query: 182 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 241 ||||||||||||||||| |||||||| ||||||||| |||||||||||| |||||||||| Sbjct: 1067 tcagtgataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaagcagccac 1126 Query: 242 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 301 |||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 1127 ccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccgaagatgaacgggg 1186 Query: 302 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcct 361 ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 1187 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccccct 1246 Query: 362 tagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttga 421 || ||||||||| |||| ||| |||| |||||| | | | | | |||||| ||||| Sbjct: 1247 tatagggaagcacccgccccagcaagggtggacgaaaccg-atctaaaatgtccccttga 1305 Query: 422 gtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaaggtttcctccgc-aag 479 |||| ||||| ||||||||||||||||||||| |||||| |||| ||||||| | ||| Sbjct: 1306 gtaaaccaaacatttggtgagaatccaatgcccccaaaacctaagggttcctccccaaag 1365 Query: 480 gttcgtccacgga--gggtgagtc-agggcctaa 510 ||||||||||||| ||||||||| ||||||||| Sbjct: 1366 gttcgtccacggatggggtgagtcaagggcctaa 1399
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 603 bits (304), Expect = e-169 Identities = 423/462 (91%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| |||||| |||||||| | |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 338 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 339 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 398 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1313 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggc 1372 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 1373 cgaaaggcgcagtcgatggacaacaggttaatattcctgtac 1414 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 928 Query: 61 aatactag 68 |||||||| Sbjct: 929 aatactag 936
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 601 bits (303), Expect = e-168 Identities = 434/477 (90%), Gaps = 2/477 (0%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| | | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 333 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 334 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 393 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 394 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 453 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 454 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 513 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1423 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1482 Query: 514 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 570 || |||||| |||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1483 catgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactaccccttgt 1539 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 985 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 1044 Query: 61 aatactag 68 |||||||| Sbjct: 1045 aatactag 1052
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 597 bits (301), Expect = e-167 Identities = 432/475 (90%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| | | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 333 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 334 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 393 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 394 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 453 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 454 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 513 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1306 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1365 Query: 514 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 568 || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1366 catgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactactcctt 1420 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 927 Query: 61 aatactag 68 |||||||| Sbjct: 928 aatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 597 bits (301), Expect = e-167 Identities = 432/475 (90%), Gaps = 2/475 (0%) Strand = Plus / Plus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| | | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 333 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 334 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 393 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 394 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 453 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 454 cgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 513 ||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1319 cgaaaacccaagggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagat 1378 Query: 514 caggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 568 || |||||| |||| ||||||||||||||||||||| ||||||||||||| |||| Sbjct: 1379 catgccgaacggcgcagtcgatggacaacaggtcaagattcctgtactactcctt 1433 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 881 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 940 Query: 61 aatactag 68 |||||||| Sbjct: 941 aatactag 948
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 593 bits (299), Expect = e-166 Identities = 343/358 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 130925 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 130866 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 130865 aatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggga 130806 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 130805 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 130746 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 130745 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 130686 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 130685 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 130626 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 130625 gctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 593 bits (299), Expect = e-166 Identities = 343/358 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 102520 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 102579 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102580 aatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggga 102639 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 102640 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 102699 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 102700 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 102759 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 102760 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 102819 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 102820 gctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccg 102877 Score = 331 bits (167), Expect = 1e-87 Identities = 179/183 (97%) Strand = Plus / Minus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 571 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355 Query: 572 ggt 574 ||| Sbjct: 130354 ggt 130352 Score = 331 bits (167), Expect = 1e-87 Identities = 179/183 (97%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 571 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090 Query: 572 ggt 574 ||| Sbjct: 103091 ggt 103093
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 587 bits (296), Expect = e-164 Identities = 421/462 (91%), Gaps = 2/462 (0%) Strand = Plus / Minus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| |||||| |||||||| | |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 338 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 339 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 398 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123952 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggc 123893 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 123892 cgaaaggcgcagtcgatggacaacaggtgaatattcctgtac 123851 Score = 587 bits (296), Expect = e-164 Identities = 421/462 (91%), Gaps = 2/462 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| |||||| |||||||| | |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 338 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 339 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 398 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 95914 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggc 95973 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||||||||| |||||||||||||||||| ||||||||||||| Sbjct: 95974 cgaaaggcgcagtcgatggacaacaggtgaatattcctgtac 96015 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 124396 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctg 124337 Query: 61 aatactag 68 |||||||| Sbjct: 124336 aatactag 124329 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 95470 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctg 95529 Query: 61 aatactag 68 |||||||| Sbjct: 95530 aatactag 95537
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 585 bits (295), Expect = e-164 Identities = 351/370 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 874 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 933 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||| Sbjct: 934 aatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacaatggggga 993 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 994 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1053 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||| ||||||||||||| |||||||| ||||||||| |||||||||||| ||||||||| Sbjct: 1054 ctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgcctataagcagcca 1113 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1114 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaagatgaacggg 1173 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1174 gctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccccc 1233 Query: 361 ttagagggaa 370 |||||||||| Sbjct: 1234 ttagagggaa 1243 Score = 77.8 bits (39), Expect = 4e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Plus Query: 416 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 474 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347 Query: 475 gc-aaggttcgtccacggagggt 496 | |||||||||||||||||||| Sbjct: 1348 ccaaaggttcgtccacggagggt 1370
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 585 bits (295), Expect = e-164 Identities = 459/510 (90%), Gaps = 3/510 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 885 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 944 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||| Sbjct: 945 aatactagatatgacctcaaaataacaggggttaaggtcggccagtgagaccatggggga 1004 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1005 taagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1064 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| Sbjct: 1065 ctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgcctagaagcagcca 1124 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||| ||||| ||||||| || ||||||||| Sbjct: 1125 cccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgcccaaaatgaacggg 1184 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| || Sbjct: 1185 gctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtaggggagcgttccccc 1244 Query: 361 ttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttg 420 ||| |||||| || || | | | |||| ||| || ||||| | |||||||| || | Sbjct: 1245 ttaaagggaaacaccccccccaacatgggtggaccaaacggaaaccagaatgtccgcctt 1304 Query: 421 agtaacgaaaacattggtgagaatccaatgccccg-aaaacccaaggtttcctccgcaa- 478 ||||||| ||||||||||||||||| |||||||| |||| | || | ||||||| ||| Sbjct: 1305 agtaacgcaaacattggtgagaatctaatgccccccaaaaactaaaggttcctccccaaa 1364 Query: 479 ggttcgtccacgga-gggtgagtcagggcc 507 ||||||||||| || |||||||||| |||| Sbjct: 1365 ggttcgtccaccgaggggtgagtcaaggcc 1394
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 583 bits (294), Expect = e-163 Identities = 353/373 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 872 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 931 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 aatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggga 991 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 992 taagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1051 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1052 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaagcagcca 1111 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1112 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1171 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 1172 gctaaacgatctgccgaagctgtgggatgtaaaaaaacatcggtaggggagcgttccgtg 1231 Query: 361 ttagagggaagca 373 |||| |||||||| Sbjct: 1232 ttagggggaagca 1244
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 581 bits (293), Expect = e-162 Identities = 435/480 (90%), Gaps = 2/480 (0%) Strand = Plus / Minus Query: 96 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntc 155 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| | | Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 156 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 215 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 216 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 275 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 276 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 335 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 336 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 395 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 456 aaaacccaaggtttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatc 514 |||||| |||| |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 5242 aaaacctaagggttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatc 5183 Query: 515 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 ||||||||| | || ||||||||||||||||| ||||||||||||||| || |||||||| Sbjct: 5182 aggccgaaacg-gttgtcgatggacaacaggtgaatattcctgtactatcctttgttggt 5124 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||| ||| | | |||||||| | ||||||||||||| || Sbjct: 5679 ggggtaaagcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatg 5620 Query: 61 aatactagatatg 73 ||||||||||||| Sbjct: 5619 aatactagatatg 5607
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 571 bits (288), Expect = e-160 Identities = 357/379 (94%), Gaps = 1/379 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 847 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 906 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 aatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggga 966 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 967 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1026 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 | |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 1027 cccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 1086 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 1087 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 1146 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggta-ggggagcgttccgc 359 |||||||||||||||||||||||||||||| |||| |||| ||| ||| ||||||||| Sbjct: 1147 gctaagcgatctgccgaagctgtgggatgtaaaaaaacatccgtatgggaagcgttccgt 1206 Query: 360 cttagagggaagcaaccgc 378 |||| |||||||| |||| Sbjct: 1207 gttagggggaagcatccgc 1225
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 567 bits (286), Expect = e-158 Identities = 420/465 (90%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 ||||||||| | |||||||||||| |||||| | ||||||||||||| | |||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 5364 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 5365 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaa 5424 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 568 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5425 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 5469 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 4918 ggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctg 4977 Query: 61 aatact 66 |||||| Sbjct: 4978 aatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 567 bits (286), Expect = e-158 Identities = 420/465 (90%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 ||||||||| | |||||||||||| |||||| | ||||||||||||| | |||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1332 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaa 1391 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 568 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1392 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 1436 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 885 ggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctg 944 Query: 61 aatact 66 |||||| Sbjct: 945 aatact 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 559 bits (282), Expect = e-156 Identities = 419/465 (90%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 ||||||||| | |||||||||||| |||||| | ||||||||||||| | |||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1332 agggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaa 1391 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 568 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1392 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 1436 Score = 99.6 bits (50), Expect = 1e-17 Identities = 62/66 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||| || || |||||||||||||||||||||||| Sbjct: 885 ggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctg 944 Query: 61 aatact 66 |||||| Sbjct: 945 aatact 950
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 551 bits (278), Expect = e-154 Identities = 418/465 (89%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 ||||||||| | |||||||||||| |||||| ||||||||||||||| | ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaaccta 1326 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| Sbjct: 1327 agggttcctccgcaaggttcgtccacggagggttagtcagggcctaagattaggccgaaa 1386 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtactacccctt 568 |||| ||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1387 ggcgcagtcgatggacaacaggcgaatattcctgtaccacccctt 1431 Score = 109 bits (55), Expect = 1e-20 Identities = 67/71 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 880 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctg 939 Query: 61 aatactagata 71 |||||| |||| Sbjct: 940 aatactggata 950
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 547 bits (276), Expect = e-152 Identities = 278/279 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 730 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 790 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 791 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 850 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 910 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcc 279 ||||||||||||||||||||||||||||||||||||||| Sbjct: 911 ccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 547 bits (276), Expect = e-152 Identities = 309/320 (96%) Strand = Plus / Plus Query: 255 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 314 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 315 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 374 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 375 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 434 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 435 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagg 494 ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaaggttcgtccacggagg 994 Query: 495 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattc 554 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 995 gtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtgaatattc 1054 Query: 555 ctgtactaccccttgttggt 574 |||||||||||||||||||| Sbjct: 1055 ctgtactaccccttgttggt 1074
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 543 bits (274), Expect = e-151 Identities = 300/309 (97%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 122340 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctg 122281 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 122280 aatactagatatgacccaaaaataataggattcaaagtcggccagtgagacgatggggga 122221 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 122220 taagcttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccg 122161 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122160 ctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 122101 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 122100 ccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggg 122041 Query: 301 gctaagcga 309 ||||||||| Sbjct: 122040 gctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 543 bits (274), Expect = e-151 Identities = 300/309 (97%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12824881 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctg 12824822 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 12824821 aatactagatatgacccaaaaataataggattcaaagtcggccagtgagacgatggggga 12824762 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 12824761 taagcttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccg 12824702 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824701 ctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 12824642 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 12824641 ccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggg 12824582 Query: 301 gctaagcga 309 ||||||||| Sbjct: 12824581 gctaagcga 12824573 Score = 87.7 bits (44), Expect = 4e-14 Identities = 50/52 (96%) Strand = Plus / Plus Query: 467 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 |||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 2412040 tttcctccgcaaggttcgtccacggagggtgagttagggcctaagattaggc 2412091
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 535 bits (270), Expect = e-149 Identities = 349/376 (92%), Gaps = 6/376 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||| Sbjct: 886 ggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctg 945 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| | |||||||| ||||||||||| ||||||||||||||| Sbjct: 946 aatactagatatgacc------tcacaggggttaaggtcggccaatgagacgatggggga 999 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1000 taagcttcatcttccagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 1059 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 1060 ctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaagcagcca 1119 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| || ||||||||| Sbjct: 1120 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaatgaacggg 1179 Query: 301 gctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcc 360 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1180 gctaaacgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgcc 1239 Query: 361 ttagagggaagcaacc 376 || |||||| ||||| Sbjct: 1240 ctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 429 aaacattggtgagaatccaatgccccgaaaa 459 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 533 bits (269), Expect = e-148 Identities = 416/465 (89%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 |||||||||| ||||||||||||||||||||| | ||||||||||||| | |||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 338 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 339 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 398 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| | || | Sbjct: 1272 acccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagac 1331 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 563 | || || | | | |||||||||||||| ||||||||||||||| Sbjct: 1332 caaatggtgcaattgatggacaacaggtttatattcctgtactac 1376 Score = 121 bits (61), Expect = 3e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 824 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 883 Query: 61 aatactagatatg 73 |||||||| |||| Sbjct: 884 aatactaggtatg 896
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 531 bits (268), Expect = e-148 Identities = 417/467 (89%), Gaps = 5/467 (1%) Strand = Plus / Plus Query: 100 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcacca 159 |||||||||||| |||||||||||||||||||||| |||||| |||||||| | |||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 160 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 219 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 220 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 279 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 280 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 339 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 340 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 399 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 400 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 459 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 460 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 519 || |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||| | Sbjct: 1355 cctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatact 1414 Query: 520 gaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 566 |||||| |||| ||||||||| |||| ||||||||||||||||||| Sbjct: 1415 gaaaggtttagttgatggacaataggttaatattcctgtactacccc 1461 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||| || |||||||||||||| |||||||||| || Sbjct: 883 ggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatg 942 Query: 61 aatactagatatgac 75 ||||||||||||||| Sbjct: 943 aatactagatatgac 957
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 529 bits (267), Expect = e-147 Identities = 331/350 (94%), Gaps = 2/350 (0%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 177709 ggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 177768 Query: 61 aatactagatatgacccaaaaataacaggggt-caaggtcggccagtgagacgatggggg 119 |||||||||||||||| ||||||| ||||| |||||||||| |||||||||||||||| Sbjct: 177769 aatactagatatgacctcaaaataagaggggggcaaggtcggctagtgagacgatggggg 177828 Query: 120 ataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgacc 179 ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 177829 ataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggcccctaaatgacc 177888 Query: 180 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 239 ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct: 177889 gctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcc 177948 Query: 240 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 299 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177949 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 178008 Query: 300 ggctaagcgat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 348 ||||||||||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178009 ggctaagcgatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 210 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 210 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 164 aggcccctaaatgaccgctcag 185 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 507 bits (256), Expect = e-140 Identities = 310/329 (94%), Gaps = 7/329 (2%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 351 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 410 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||| || || |||| ||||||||||||||||||||||||||||||| Sbjct: 411 aatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggga 463 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 464 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 523 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 524 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 583 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 584 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 643 Query: 301 gctaagcgatctgccgaagctgtgggatg 329 ||||||||||||||||||||||||||||| Sbjct: 644 gctaagcgatctgccgaagctgtgggatg 672
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 486 bits (245), Expect = e-134 Identities = 403/456 (88%) Strand = Plus / Minus Query: 4 gtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 63 |||||||||||||||||||||||| | |||| ||||||||| |||||||||||||||| Sbjct: 2952 gtaaagcactgtttcggtgcgggcaatgagagcagtaccaaattgaggcaaactctgaat 2893 Query: 64 actagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataa 123 | |||||| || | ||||| ||| |||||||||||||| |||||||||| | ||||||| Sbjct: 2892 attagatacgatctcaaaatcacaagggtcaaggtcggcgagtgagacgacgagggataa 2833 Query: 124 gcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctc 183 ||||||||||||||||||||||| || || ||||||||||||||||||||||||| |||| Sbjct: 2832 gcttcatcgtcgagagggaaacaacctggatcaccagctaaggcccctaaatgactgctc 2773 Query: 184 agtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 243 ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2772 agtgataaaggaggtaggggtgcaaagacagccaggaggtttgcctagaagcaaccaccc 2713 Query: 244 tttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggct 303 || ||| |||||||||||||||||| ||||||||| ||||| | |||||||| ||||| Sbjct: 2712 ttgaaaaagtgcgtaatagctcactaatcgagcgcacttgcaccaaagatgaattgggct 2653 Query: 304 aagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctta 363 |||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct: 2652 aagcgatctgttgaagctatgggatgtcaaaatgcatcgataggggagcgttccgcctta 2593 Query: 364 gagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagt 423 |||||||||| | || || | ||| || || ||||||||| |||||||||||| | Sbjct: 2592 gagggaagcacctgcacgagtagtggtggaagaggcggaagcgggaatgtcggctttttt 2533 Query: 424 aacgaaaacattggtgagaatccaatgccccgaaaa 459 || | ||||||||||||||||||||||||| ||||| Sbjct: 2532 aaggcaaacattggtgagaatccaatgccctgaaaa 2497 Score = 149 bits (75), Expect = 1e-32 Identities = 99/107 (92%) Strand = Plus / Minus Query: 468 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 527 |||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| | Sbjct: 2482 ttcctccgcaaggttcatccacggagggtgagttagggcctaagattaggccgaaaggtg 2423 Query: 528 tagtcgatggacaacaggtcaatattcctgtactaccccttgttggt 574 |||||||||||||| |||| |||||||| |||||||| ||||||||| Sbjct: 2422 tagtcgatggacaagaggtgaatattccagtactacctcttgttggt 2376
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 486 bits (245), Expect = e-134 Identities = 411/466 (88%), Gaps = 3/466 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| | ||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 337 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 338 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 397 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 398 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 ||||||||| ||||| || ||||||||||| || |||||||||||| |||||| | | | Sbjct: 1275 aacccaaggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaag 1334 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 563 || || ||||||||||||||| ||||||| |||||||||||||||| Sbjct: 1335 ccaaacggcgtagtcgatggataacaggttaatattcctgtactac 1380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | | ||||||||||| || |||||||||| Sbjct: 831 ggggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctg 890 Query: 61 aatactagatatga 74 ||||||| |||||| Sbjct: 891 aatactaaatatga 904
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 486 bits (245), Expect = e-134 Identities = 406/460 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| | |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 340 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4345 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccg 4404 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||||||| | |||||||| ||| ||||||||||||||||| Sbjct: 4405 aaaggcgcaatcgatggataactggtcaatattcctgtac 4444 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 3903 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctg 3962 Query: 61 aatactagatatg 73 ||||||| ||||| Sbjct: 3963 aatactaaatatg 3975
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 480 bits (242), Expect = e-132 Identities = 296/315 (93%), Gaps = 7/315 (2%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 367 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 426 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||| || || |||| ||||||||||||||||||||||||||||||| Sbjct: 427 aatactagatctggcctcaaaa-------ggtcaaggtcggccagtgagacgatggggga 479 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 480 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 539 Query: 181 ctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcca 240 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 540 ctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagcca 599 Query: 241 ccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggg 300 ||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 600 cccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggg 659 Query: 301 gctaagcgatctgcc 315 ||||||||||||||| Sbjct: 660 gctaagcgatctgcc 674
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 478 bits (241), Expect = e-131 Identities = 409/465 (87%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 337 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 338 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 397 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 398 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1312 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaagg 1371 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 1372 ccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 1416 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 927 Query: 61 aatactaga 69 ||||||||| Sbjct: 928 aatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 478 bits (241), Expect = e-131 Identities = 409/465 (87%), Gaps = 4/465 (0%) Strand = Plus / Minus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 337 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 338 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 397 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 398 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 114350 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaagg 114291 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 114290 ccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 114246 Score = 478 bits (241), Expect = e-131 Identities = 409/465 (87%), Gaps = 4/465 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 337 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 338 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 397 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 398 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 |||| |||| ||||||||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 87638 aacctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaagg 87697 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 |||||||||||| |||||||||||||||| ||||||||||||||| Sbjct: 87698 ccgaaaggcgtattcgatggacaacaggttaatattcctgtacta 87742 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 114794 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 114735 Query: 61 aatactaga 69 ||||||||| Sbjct: 114734 aatactaga 114726 Score = 121 bits (61), Expect = 3e-24 Identities = 67/69 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 87194 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctg 87253 Query: 61 aatactaga 69 ||||||||| Sbjct: 87254 aatactaga 87262
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 462 bits (233), Expect = e-127 Identities = 403/460 (87%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| | |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 340 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1311 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccg 1370 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||||||| | |||||||| ||| ||| ||||||||||||| Sbjct: 1371 aaaggcgcaatcgatggataacgggttaatattcctgtac 1410 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctg 928 Query: 61 aatactagatatg 73 ||||||| ||||| Sbjct: 929 aatactaaatatg 941
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 462 bits (233), Expect = e-127 Identities = 404/460 (87%), Gaps = 1/460 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| | |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 340 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaa-tacat 1189 Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1310 ctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccg 1369 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 | ||||| | |||||||| ||| ||| ||||||||||||| Sbjct: 1370 acaggcgcaatcgatggataacgggttaatattcctgtac 1409 Score = 113 bits (57), Expect = 7e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 869 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctg 928 Query: 61 aatactagatatg 73 ||||||| ||||| Sbjct: 929 aatactaaatatg 941
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 845 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 904 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 905 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 964 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 965 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1024 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1025 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1084 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1085 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1144 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1145 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1199 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1200 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1259 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1260 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1319 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1320 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1379 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1380 caatagattaatattcttgtactacccc 1407
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 845 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 904 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 905 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 964 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 965 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1024 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1025 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1084 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1085 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1144 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1145 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1199 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1200 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1259 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1260 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1319 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1320 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1379 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1380 caatagattaatattcttgtactacccc 1407
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 845 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 904 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 905 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 964 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 965 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1024 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1025 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1084 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1085 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1144 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1145 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1199 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1200 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1259 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1260 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1319 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1320 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1379 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1380 caatagattaatattcttgtactacccc 1407
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| || | ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| |||| ||||||| ||||||||||| Sbjct: 1381 caataggttaatattcttgtactacccc 1408
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 448 bits (226), Expect = e-123 Identities = 483/568 (85%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaaggagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 440 bits (222), Expect = e-120 Identities = 482/568 (84%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| || Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaggc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 440 bits (222), Expect = e-120 Identities = 482/568 (84%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| | ||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagcttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||| ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 440 bits (222), Expect = e-120 Identities = 482/568 (84%), Gaps = 7/568 (1%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||| ||||||||| || ||| |||||||||||||| |||||||||| || Sbjct: 846 ggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaactatg 905 Query: 61 aatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| |||||| Sbjct: 906 aatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccatgggg 965 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||| ||| | |||| |||||||||||||||||||| Sbjct: 966 gataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaatgac 1025 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 | || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| ||| Sbjct: 1026 cactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaagaagc 1085 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||||||| Sbjct: 1086 caccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatgaacg 1145 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || || || ||| ||||||| ||||||||| | |||||| |||||||||||| | Sbjct: 1146 ggaataggcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgttctg 1200 Query: 359 ccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggct 418 ||||| | ||||||| | || || | ||| || ||||| |||| ||||||||||||| Sbjct: 1201 ccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtgagaatgtcggct 1260 Query: 419 tgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaa 478 ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| | ||| Sbjct: 1261 tgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattccttcacaa 1320 Query: 479 ggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatgga 538 ||||| |||||| ||||||||||||| | |||||||| | |||||| ||| |||||| Sbjct: 1321 ggttcatccacgtagggtgagtcaggtcgtaagatcatactgaaaggtttagctgatgga 1380 Query: 539 caacaggtcaatattcctgtactacccc 566 ||| || | ||||||| ||||||||||| Sbjct: 1381 caatagattaatattcttgtactacccc 1408
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 408 bits (206), Expect = e-111 Identities = 379/437 (86%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 341 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 2859 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 ||||||||||| | ||||||||||| |||||||||||||||| |||||| |||| || Sbjct: 2860 taaggtttcctctggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctga 2919 Query: 522 aaggcgtagtcgatgga 538 || |||||||||||||| Sbjct: 2920 aaagcgtagtcgatgga 2936 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 2425 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctg 2484 Query: 61 aatact 66 |||||| Sbjct: 2485 aatact 2490
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 404 bits (204), Expect = e-109 Identities = 325/365 (89%), Gaps = 8/365 (2%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||| |||| ||| |||| ||||||||| |||||||||| || Sbjct: 870 ggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactatg 929 Query: 61 aatactagatatgacc--caaaaataacaggggtcaaggtcggccagtgagacgatgggg 118 |||||||||||||||| |||||||||||||| | ||||| | |||||||||| |||||| Sbjct: 930 aatactagatatgacctccaaaaataacagggataaaggtggaccagtgagaccatgggg 989 Query: 119 gataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgac 178 ||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 990 gataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcccctaaatgac 1049 Query: 179 cgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagc 238 |||| ||| ||||||||||| |||||||| ||||| |||||||||||||||||||| ||| Sbjct: 1050 cgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgcctagaagaagc 1109 Query: 239 caccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacg 298 |||||||||||||||||||||||||| ||||||||||||| ||||||| ||| ||||| | Sbjct: 1110 caccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgccgaatatgaatg 1169 Query: 299 gggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccg 358 || ||||||| | |||||||||||||||||| | |||||||||||||||||| | Sbjct: 1170 ggaataagcgacccgccgaagctgtgggatgtaa------atcggtaggggagcgttctg 1223 Query: 359 cctta 363 ||||| Sbjct: 1224 cctta 1228 Score = 206 bits (104), Expect = 6e-50 Identities = 155/172 (90%) Strand = Plus / Plus Query: 395 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 454 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 455 gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 514 ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389 Query: 515 aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 566 | | |||||| |||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactacccc 1441
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 391 bits (197), Expect = e-105 Identities = 202/204 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 840 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 900 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 901 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 960 Query: 181 ctcagtgataaaggaggtgggggt 204 |||||||||||||||||| ||||| Sbjct: 961 ctcagtgataaaggaggtaggggt 984
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 391 bits (197), Expect = e-105 Identities = 394/459 (85%), Gaps = 2/459 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 341 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 190229 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| |||||||| ||||||||||| |||||||||||||||| |||||| |||| || Sbjct: 190230 taaggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctga 190289 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtac 560 || |||||||||||||| ||||||| ||||||||||||| Sbjct: 190290 aaagcgtagtcgatggataacaggttaatattcctgtac 190328 Score = 391 bits (197), Expect = e-105 Identities = 394/459 (85%), Gaps = 2/459 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 341 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 151656 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| |||||||| ||||||||||| |||||||||||||||| |||||| |||| || Sbjct: 151657 taaggattcctccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctga 151716 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtac 560 || |||||||||||||| ||||||| ||||||||||||| Sbjct: 151717 aaagcgtagtcgatggataacaggttaatattcctgtac 151755 Score = 121 bits (61), Expect = 3e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 189792 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 189851 Query: 61 aatac 65 ||||| Sbjct: 189852 aatac 189856 Score = 121 bits (61), Expect = 3e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 151219 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 151278 Query: 61 aatac 65 ||||| Sbjct: 151279 aatac 151283
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 379 bits (191), Expect = e-102 Identities = 391/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 |||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||| ||||||||| ||||| || ||||||||||||||||||| | | |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcgg 189188 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 189308 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 189309 aggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaa 189368 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtac 560 |||||||||||||| ||||||| ||||||||||||| Sbjct: 189369 agcgtagtcgatggataacaggttaatattcctgtac 189405 Score = 379 bits (191), Expect = e-102 Identities = 391/457 (85%), Gaps = 2/457 (0%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 |||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||| ||||||||| ||||| || ||||||||||||||||||| | | |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcgg 150745 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 150865 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||| ||||||||||| ||||||||||||||||||||||| |||| |||| Sbjct: 150866 aggattcctccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaa 150925 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtac 560 |||||||||||||| ||||||| ||||||||||||| Sbjct: 150926 agcgtagtcgatggataacaggttaatattcctgtac 150962 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 188869 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 188928 Query: 61 aatacta 67 ||||||| Sbjct: 188929 aatacta 188935 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 150426 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 150485 Query: 61 aatacta 67 ||||||| Sbjct: 150486 aatacta 150492
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 369 bits (186), Expect = 7e-99 Identities = 382/445 (85%), Gaps = 2/445 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||||| |||||||||||||| | |||||||||| |||||||| | || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 282 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 340 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 1301 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccg 1360 Query: 521 aaaggcgtagtcgatggacaacagg 545 || |||| || |||||||||||||| Sbjct: 1361 aagggcgcagccgatggacaacagg 1385 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 858 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 917 Query: 61 aatact 66 |||||| Sbjct: 918 aatact 923
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 369 bits (186), Expect = 7e-99 Identities = 382/445 (85%), Gaps = 2/445 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||||| |||||||||||||| | |||||||||| |||||||| | || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 282 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 340 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 1314 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccg 1373 Query: 521 aaaggcgtagtcgatggacaacagg 545 || |||| || |||||||||||||| Sbjct: 1374 aagggcgcagccgatggacaacagg 1398 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 871 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 930 Query: 61 aatact 66 |||||| Sbjct: 931 aatact 936
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 369 bits (186), Expect = 7e-99 Identities = 382/445 (85%), Gaps = 2/445 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||||| |||||||||||||| | |||||||||| |||||||| | || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 282 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 340 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||| |||| | | |||| |||||||||| ||||||||||||||||||| | |||||| Sbjct: 5888 ccaagggttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccg 5947 Query: 521 aaaggcgtagtcgatggacaacagg 545 || |||| || |||||||||||||| Sbjct: 5948 aagggcgcagccgatggacaacagg 5972 Score = 123 bits (62), Expect = 7e-25 Identities = 65/66 (98%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5445 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 5504 Query: 61 aatact 66 |||||| Sbjct: 5505 aatact 5510
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 357 bits (180), Expect = 3e-95 Identities = 182/183 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 725 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 726 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 785 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccg 180 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 786 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccg 845 Query: 181 ctc 183 ||| Sbjct: 846 ctc 848
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 355 bits (179), Expect = 1e-94 Identities = 182/183 (99%) Strand = Plus / Minus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 575 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634369 Query: 576 cgg 578 ||| Sbjct: 5634368 cgg 5634366
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 355 bits (179), Expect = 1e-94 Identities = 182/183 (99%) Strand = Plus / Minus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 575 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 5634358 Query: 576 cgg 578 ||| Sbjct: 5634357 cgg 5634355
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 355 bits (179), Expect = 1e-94 Identities = 182/183 (99%) Strand = Plus / Plus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 575 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttggta 18516 Query: 576 cgg 578 ||| Sbjct: 18517 cgg 18519
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 353 bits (178), Expect = 4e-94 Identities = 195/201 (97%) Strand = Plus / Plus Query: 66 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 125 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 126 ttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcag 185 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 186 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 245 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 246 taaagagtgcgtaatagctca 266 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 353 bits (178), Expect = 4e-94 Identities = 195/201 (97%) Strand = Plus / Plus Query: 66 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 125 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 126 ttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcag 185 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 186 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 245 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 246 taaagagtgcgtaatagctca 266 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 349 bits (176), Expect = 6e-93 Identities = 205/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 122 aagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgc 181 |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 182 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 241 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 242 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 302 ctaagcgatctgccgaagctgtgggatgtcaaaat 336 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 349 bits (176), Expect = 6e-93 Identities = 205/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 122 aagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgc 181 |||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 182 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 241 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 242 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 302 ctaagcgatctgccgaagctgtgggatgtcaaaat 336 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 345 bits (174), Expect = 1e-91 Identities = 392/461 (85%), Gaps = 3/461 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggntcaccag 160 ||||||||||| || |||||||||||||| ||||| ||||||||||||| || |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 281 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 339 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 340 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 399 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 400 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 459 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 460 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 519 || |||| ||||| || |||| ||||||||| |||||||||||||||||||||| | ||| Sbjct: 1312 cctaagggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagatgatgcc 1371 Query: 520 gaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1372 gaaaggcgtagtcgatggacaacaggtcaaaattcctgtac 1412 Score = 119 bits (60), Expect = 1e-23 Identities = 66/68 (97%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 927 Query: 61 aatactag 68 |||||||| Sbjct: 928 aatactag 935
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 329 bits (166), Expect = 6e-87 Identities = 168/169 (99%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 933 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 934 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 993 Query: 121 taagcttcatcgtcgagagggaaacagcccggntcaccagctaaggccc 169 |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 994 taagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 327 bits (165), Expect = 2e-86 Identities = 191/200 (95%) Strand = Plus / Minus Query: 129 atcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtga 188 |||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 189 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 248 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 249 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 308 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 309 atctgccgaagctgtgggat 328 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 325 bits (164), Expect = 9e-86 Identities = 386/458 (84%), Gaps = 3/458 (0%) Strand = Plus / Minus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 |||||||| || ||||||||||||| ||| ||||||||||||||| | | ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 17735 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||| |||| |||||| |||||||||||||||| |||||| | ||| | || Sbjct: 17734 agggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaat 17676 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||| |||||||| ||||||| |||||||||||||| Sbjct: 17675 agcgtaatcgatggataacaggttaatattcctgtact 17638 Score = 325 bits (164), Expect = 9e-86 Identities = 386/458 (84%), Gaps = 3/458 (0%) Strand = Plus / Plus Query: 104 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagcta 163 |||||||| || ||||||||||||| ||| ||||||||||||||| | | ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 164 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 223 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 224 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 283 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 284 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 343 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 344 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 403 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 404 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 463 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 3131 Query: 464 aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 523 ||| |||||||| |||| |||||| |||||||||||||||| |||||| | ||| | || Sbjct: 3132 agggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ctaat 3190 Query: 524 ggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||| |||||||| ||||||| |||||||||||||| Sbjct: 3191 agcgtaatcgatggataacaggttaatattcctgtact 3228 Score = 95.6 bits (48), Expect = 2e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 18176 ggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaactct 18117 Query: 60 gaatacta 67 |||||||| Sbjct: 18116 gaatacta 18109 Score = 95.6 bits (48), Expect = 2e-16 Identities = 64/68 (94%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 2690 ggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaactct 2749 Query: 60 gaatacta 67 |||||||| Sbjct: 2750 gaatacta 2757
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 313 bits (158), Expect = 3e-82 Identities = 386/460 (83%), Gaps = 3/460 (0%) Strand = Plus / Plus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 ||||||||| || |||||||||||||| ||| | ||||||||||||| | |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 342 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| | ||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgttta--tgcatcg 2877 Query: 343 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 402 |||||||||||||| || ||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctgc-ttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 403 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 462 || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaacct 2996 Query: 463 aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 522 |||| |||||| | |||| ||||||||||||||| ||||||| ||||| || |||||||| Sbjct: 2997 aaggattcctctggaaggctcgtccacggagggttagtcaggacctaaaatgaggccgaa 3056 Query: 523 aggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||| | |||||||||||||| ||||||||||||||| Sbjct: 3057 aggcgtaattgatggacaacaggttaatattcctgtacta 3096 Score = 89.7 bits (45), Expect = 9e-15 Identities = 61/67 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| || ||||||||||||| ||||||| | Sbjct: 2559 ggggtaaagcactgtttcggtgcgggctgcgaaagyggtaccaaatcgatgcaaactaag 2618 Query: 61 aatacta 67 ||||||| Sbjct: 2619 aatacta 2625
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 307 bits (155), Expect = 2e-80 Identities = 205/222 (92%) Strand = Plus / Plus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| | ||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 398 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| |||| ||||| ||||||||||||||||| |||||||||||| |||||||||| || Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 |||| |||| |||||||||| ||||||| || |||||||||||| Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823 Score = 123 bits (62), Expect = 7e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1272 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctg 1331 Query: 61 aatactagatatga 74 ||||||||| |||| Sbjct: 1332 aatactagacatga 1345
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 297 bits (150), Expect = 2e-77 Identities = 406/489 (83%), Gaps = 7/489 (1%) Strand = Plus / Plus Query: 78 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 137 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 138 agggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 197 |||| |||| || | |||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 198 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 257 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 258 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 317 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 318 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 377 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 378 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 437 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 438 tgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtg 497 ||||||||||| |||| |||||| |||| ||||| | |||||||| |||||| |||||| Sbjct: 1298 cgagaatccaattccccaaaaacctaagggttccttcacaaggttcatccacgtagggtg 1357 Query: 498 agtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctg 557 ||||||| |||||||||| | |||||| || | |||||| || |||| |||| ||||| Sbjct: 1358 agtcaggtcctaagatcatactgaaaggttta-ttgatggataataggttaataatcctg 1416 Query: 558 tactacccc 566 ||||||||| Sbjct: 1417 tactacccc 1425 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||| ||||| |||||||| || |||||||||||||| |||||| ||| || Sbjct: 858 ggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatg 917 Query: 61 aatactagatatgac 75 ||||||||||||||| Sbjct: 918 aatactagatatgac 932
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 285 bits (144), Expect = 8e-74 Identities = 206/227 (90%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Plus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| ||||| | ||||||||||| | ||||| ||||||| |||||| || Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 | |||||||| |||||||||||| ||||||| |||||||||||||| Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 882 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 941 Query: 61 aatactaga 69 ||||||||| Sbjct: 942 aatactaga 950 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccgc 359 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 270 bits (136), Expect = 5e-69 Identities = 231/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 98 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcac 157 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 158 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 217 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 218 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 277 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 278 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 337 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 338 catcggtaggggagcgttccgc 359 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||||| |||| ||||| | ||| ||||||| ||||||||||||||| |||||| Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||| |||||| |||||||| || ||||||||||| Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtact 1409 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 868 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 927 Query: 61 aatact 66 |||||| Sbjct: 928 aatact 933
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 266 bits (134), Expect = 7e-68 Identities = 202/225 (89%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 143 bits (72), Expect = 7e-31 Identities = 138/160 (86%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||| Sbjct: 933 ccaagggttcctccgcaaggctcgtccacggagggttagtcagggcctaaggcgaggccg 992 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 |||||||||||||||||||||| ||| || ||||| |||| Sbjct: 993 aaaggcgtagtcgatggacaacgggttaacattcccgtac 1032 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 61 aatac 65 ||||| Sbjct: 550 aatac 554
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Plus Query: 341 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 400 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctg 557 ||||||||||||||||| | ||||| |||||||||| Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408 Score = 256 bits (129), Expect = 7e-65 Identities = 200/224 (89%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 93.7 bits (47), Expect = 6e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 864 ggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaactctg 923 Query: 61 aatactagata 71 ||||||||||| Sbjct: 924 aatactagata 934
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 262 bits (132), Expect = 1e-66 Identities = 203/227 (89%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||||| ||||||||||||| | |||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 398 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632 Score = 99.6 bits (50), Expect = 1e-17 Identities = 65/70 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 1019 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 1078 Query: 61 aatactagat 70 |||||||||| Sbjct: 1079 aatactagat 1088
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 262 bits (132), Expect = 1e-66 Identities = 200/223 (89%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| |||||||||||||||||||||| Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 875 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 934 Query: 61 aatactag 68 |||||||| Sbjct: 935 aatactag 942 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccgc 359 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451 Score = 238 bits (120), Expect = 2e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 888 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 947 Query: 61 aatactaga 69 ||||||||| Sbjct: 948 aatactaga 956
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 4e-63 Identities = 159/170 (93%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220 Score = 238 bits (120), Expect = 2e-59 Identities = 197/223 (88%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 2657 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 2716 Query: 61 aatactaga 69 ||||||||| Sbjct: 2717 aatactaga 2725
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 246 bits (124), Expect = 7e-62 Identities = 226/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| | || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 339 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 340 tcggtaggggagcgttccg 358 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 139 bits (70), Expect = 1e-29 Identities = 143/166 (86%), Gaps = 1/166 (0%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 457 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 | ||||||| ||||||| | ||| ||||||| ||||||| ||||||| ||||||| ||| Sbjct: 1312 agcccaagggttcctccactaggctcgtccagggagggtcagtcaggacctaagacgagg 1371 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactac 563 || || |||| |||||||||| |||||| || ||||||||||||| Sbjct: 1372 ccaaacggcgcagtcgatggaaaacaggcgaacattcctgtactac 1417 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||| | Sbjct: 873 ggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaactccg 932 Query: 61 aatactaga 69 ||||||||| Sbjct: 933 aatactaga 941
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 244 bits (123), Expect = 3e-61 Identities = 197/222 (88%) Strand = Plus / Minus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 323 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 244 bits (123), Expect = 3e-61 Identities = 197/222 (88%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 323 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 170616 ggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactctg 170557 Query: 61 aatact 66 |||||| Sbjct: 170556 aatact 170551 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 122310 ggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactctg 122369 Query: 61 aatact 66 |||||| Sbjct: 122370 aatact 122375
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 244 bits (123), Expect = 3e-61 Identities = 224/258 (86%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 340 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 341 cggtaggggagcgttccg 358 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 149 bits (75), Expect = 1e-32 Identities = 120/135 (88%) Strand = Plus / Plus Query: 406 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 465 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 466 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 525 | |||||||| |||||||||| |||||||| |||| || |||||| ||| ||||||| Sbjct: 3015 ggttcctccggcaggttcgtccgcggagggttagtcgggacctaaggcgaggtcgaaagg 3074 Query: 526 cgtagtcgatggaca 540 ||||||||||||||| Sbjct: 3075 cgtagtcgatggaca 3089 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 61 aatac 65 ||||| Sbjct: 2630 aatac 2634
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 244 bits (123), Expect = 3e-61 Identities = 197/222 (88%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | | |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 323 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 190 bits (96), Expect = 3e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 |||| ||||| | ||||||||||||| ||||||||||||||| ||||||| ||||||| Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402 Query: 522 aaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 901 ggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactctg 960 Query: 61 aatact 66 |||||| Sbjct: 961 aatact 966
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 242 bits (122), Expect = 1e-60 Identities = 200/225 (88%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 61 aatac 65 ||||| Sbjct: 548 aatac 552 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Plus Query: 398 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 457 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 | || |||| |||| || ||| |||||| | |||||||||||| |||||| ||| Sbjct: 923 accctaagggttccagagccaggctcgtccgctctgggtgagtcaggtcctaaggcgagg 982 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 || || ||||||||||||||| ||| ||| || ||||| |||| Sbjct: 983 ccaaacggcgtagtcgatggataacgggttaacattcccgtac 1025
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 242 bits (122), Expect = 1e-60 Identities = 199/225 (88%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||| ||||||||||||||||||||||| | |||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 326 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| ||||||| | ||| ||||||| || |||| |||| || |||||| || Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559 Score = 97.6 bits (49), Expect = 4e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 1005 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 1064 Query: 61 aatactaga 69 ||||||||| Sbjct: 1065 aatactaga 1073
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Minus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Minus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5434056 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5433997 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 5433996 cgaaaggcgtagtcgatggaca 5433975 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 3897382 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 3897441 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 3897442 cgaaaggcgtagtcgatggaca 3897463 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2806777 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2806718 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 2806717 cgaaaggcgtagtcgatggaca 2806696 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 1006225 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 1006284 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 1006285 cgaaaggcgtagtcgatggaca 1006306 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 61 aatac 65 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 61 aatac 65 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 61 aatac 65 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 61 aatac 65 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Minus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Minus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 240 bits (121), Expect = 4e-60 Identities = 201/228 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 5944099 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 5944040 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 5944039 cgaaaggcgtagtcgatggaca 5944018 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Minus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 4916455 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 4916396 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 4916395 cgaaaggcgtagtcgatggaca 4916374 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2503841 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2503900 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 2503901 cgaaaggcgtagtcgatggaca 2503922 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 2380521 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 2380580 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 2380581 cgaaaggcgtagtcgatggaca 2380602 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 61 aatac 65 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 61 aatac 65 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 61 aatac 65 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 61 aatac 65 ||||| Sbjct: 2378672 aatac 2378676
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 238 bits (120), Expect = 2e-59 Identities = 135/140 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 365049 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 365108 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 365109 aatactagatatgacctcaaaataacaggggtcaaggtcggccagtgagacggtggggga 365168 Query: 121 taagcttcatcgtcgagagg 140 |||||||||||||||||||| Sbjct: 365169 taagcttcatcgtcgagagg 365188 Score = 192 bits (97), Expect = 9e-46 Identities = 127/136 (93%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 135 gagagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtgataaagg 194 |||||||||||||||||| ||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 195 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 253 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 254 gcgtaatagctcactg 269 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 210 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 7e-59 Identities = 158/171 (92%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 ||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602 Score = 218 bits (110), Expect = 2e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 326 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 95.6 bits (48), Expect = 2e-16 Identities = 63/68 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| | Sbjct: 938 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaag 997 Query: 61 aatactag 68 |||||||| Sbjct: 998 aatactag 1005
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 232 bits (117), Expect = 1e-57 Identities = 197/224 (87%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2838 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2897 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 2898 aaaagcgtagtcgatggacaacgggttaacattcccgtac 2937 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| |||||||| | || ||||||||| |||||||||||||| Sbjct: 2403 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 2462 Query: 61 aatac 65 ||||| Sbjct: 2463 aatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 232 bits (117), Expect = 1e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 129 bits (65), Expect = 1e-26 Identities = 128/149 (85%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 919 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 978 Query: 512 atcaggccgaaaggcgtagtcgatggaca 540 ||| |||||||||||||||||||||| Sbjct: 979 gcgaggtcgaaaggcgtagtcgatggaca 1007 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 61 aatact 66 |||||| Sbjct: 547 aatact 552
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 232 bits (117), Expect = 1e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 61 aatactagata 71 ||||||||||| Sbjct: 921 aatactagata 931
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 232 bits (117), Expect = 1e-57 Identities = 200/228 (87%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 226 bits (114), Expect = 6e-56 Identities = 156/170 (91%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| |||||| Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216 Score = 117 bits (59), Expect = 4e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 61 aatactagata 71 ||||||||||| Sbjct: 25730 aatactagata 25740
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 228 bits (115), Expect = 2e-56 Identities = 183/206 (88%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 281 ttgcgctgaagatgaacggggctaag 306 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 920 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 980 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 61 aatactagat 70 ||||| |||| Sbjct: 547 aataccagat 556
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 338 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 397 ||||||||||||||||||||| | ||| | |||||| || ||| | | || |||||| Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078 Query: 398 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 457 |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138 Query: 458 aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 517 ||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198 Query: 518 ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||||||||||||||||||||| ||| | | |||||||| |||| Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241 Score = 178 bits (90), Expect = 1e-41 Identities = 185/217 (85%) Strand = Plus / Plus Query: 114 tgggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaa 173 ||||||||||||| ||| ||| ||||||||||||||| | ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 174 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 233 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 234 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 293 ||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| || Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaaat 2957 Query: 294 gaacggggctaagcgatctgccgaagctgtgggatgt 330 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 2958 gaatgggactaagctatttgccgaagctgtgggatgt 2994 Score = 109 bits (55), Expect = 1e-20 Identities = 64/67 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| Sbjct: 2686 ggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctg 2745 Query: 61 aatacta 67 ||||||| Sbjct: 2746 aatacta 2752
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 226 bits (114), Expect = 6e-56 Identities = 226/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 336 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 337 gcatcggtaggggagcgttccg 358 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551 Score = 73.8 bits (37), Expect = 6e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| || |||| |||| || |||||||||| | |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccgctctgggttagtccggacctaag 980 Query: 512 atcaggccgaaaggcgtagtcgatggaca 540 ||| |||||||||||||||||||||| Sbjct: 981 gcgaggtcgaaaggcgtagtcgatggaca 1009
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 6e-56 Identities = 195/222 (87%) Strand = Plus / Plus Query: 340 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 399 |||||||||||||||||||| | | | ||||| | || ||| |||||| |||||||| Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332 Query: 400 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 459 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392 Query: 460 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 519 || |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||| ||||| Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452 Query: 520 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494 Score = 91.7 bits (46), Expect = 2e-15 Identities = 182/227 (80%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| |||||||||||| | | ||| ||||||||||||||| | ||||||| Sbjct: 1016 gccagtgagactgcgggggataagctccgttgtcaagagggaaacagcccagatcaccag 1075 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||||||||||||| | || |||| ||||| ||| | ||| | ||| |||||| Sbjct: 1076 ctaaggcccctaaatggtcactaagtggataaggatgtgagaatgcttaaacaaccagga 1135 Query: 221 ggtttgcctagaagcagc---caccctttaaagagtgcgtaatagctcactgatcgagcg 277 |||| || |||||||||| | |||| ||||||||||||||||||||||| | |||| Sbjct: 1136 ggttcgcttagaagcagctatcttccttgaaagagtgcgtaatagctcactggtaaagcg 1195 Query: 278 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1196 ttcttgcgccgagaatggccgggactaagtgacctgccgaagctgtg 1242 Score = 85.7 bits (43), Expect = 1e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| | ||||||||| ||||||||||| ||| ||||||||| | Sbjct: 932 ggggtaaagcactgtttcgatacgggctgcgaaagcggtaccaagtcgtggcaaactcag 991 Query: 61 aatactagata 71 ||||||||||| Sbjct: 992 aatactagata 1002
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 197/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 921 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 980 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||| |||||||||||||||||| ||| || ||||| |||| Sbjct: 981 aaaagcgtagtcgatggacaacgggttaacattcccgtac 1020 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| |||||||| | || ||||||||| |||||||||||||| Sbjct: 487 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 224 bits (113), Expect = 2e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| |||||| Sbjct: 919 cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||||||| ||||||||||||||||||| ||| || ||||| ||||| Sbjct: 979 gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctg 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccg 358 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 224 bits (113), Expect = 2e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 131 bits (66), Expect = 3e-27 Identities = 123/142 (86%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| |||| || |||||||||||| |||| |||| || |||||| |||| Sbjct: 927 ccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaaggcgaggc 986 Query: 519 cgaaaggcgtagtcgatggaca 540 |||||||||||||||||||||| Sbjct: 987 cgaaaggcgtagtcgatggaca 1008 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 222 bits (112), Expect = 1e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 |||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 222 bits (112), Expect = 1e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 |||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Minus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 2050553 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 2050494 Query: 522 aaggcgtagtcgatgga 538 |||||||||||||||| Sbjct: 2050493 caggcgtagtcgatgga 2050477 Score = 153 bits (77), Expect = 8e-34 Identities = 167/197 (84%) Strand = Plus / Plus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 521 ||||| |||| ||| |||| |||||| ||| |||| |||| || |||||| ||||||| Sbjct: 1450948 caagggttcccccggaaggctcgtccgcggggggttagtcgggacctaaggcgaggccga 1451007 Query: 522 aaggcgtagtcgatgga 538 |||||||||||||||| Sbjct: 1451008 caggcgtagtcgatgga 1451024 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 49 |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 2050984 ggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 2050936 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 49 |||||| ||||||| ||||||||||| ||| |||| |||||||||||| Sbjct: 1450517 ggggtagagcactgaatcggtgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 222 bits (112), Expect = 1e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 222 bits (112), Expect = 1e-54 Identities = 198/227 (87%) Strand = Plus / Minus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| |||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 61 aatactag 68 |||||||| Sbjct: 137418 aatactag 137425 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 61 aatactag 68 |||||||| Sbjct: 48126 aatactag 48119
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 159 bits (80), Expect = 1e-35 Identities = 187/223 (83%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 1029 ccagtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagc 1088 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||| || | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1089 taaggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1148 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1149 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1208 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1209 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1251 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| Sbjct: 944 ggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactca 1003 Query: 60 gaatactagatatg 73 |||||| ||||||| Sbjct: 1004 gaatacaagatatg 1017
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 562 | ||||| |||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496 Score = 159 bits (80), Expect = 1e-35 Identities = 187/223 (83%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 1029 ccagtgagaccgtgggggataagcttcatggtcaagagggaaacagcccagatcaccagc 1088 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||| || | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1089 taaggcccctaagtggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1148 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1149 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1208 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1209 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1251 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| Sbjct: 944 ggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactca 1003 Query: 60 gaatactagatatg 73 |||||| ||||||| Sbjct: 1004 gaatacaagatatg 1017
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 218 bits (110), Expect = 2e-53 Identities = 182/205 (88%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 282 tgcgctgaagatgaacggggctaag 306 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 127 bits (64), Expect = 4e-26 Identities = 139/164 (84%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| || |||| |||||||| | || |||||| ||||||||||||||||||||||| Sbjct: 917 cccgaaaccctaagggttcctccggacggctcgtccgcggagggtgagtcagggcctaag 976 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcc 555 |||| ||| |||||||||||||| ||| ||| || ||||| Sbjct: 977 gcgaggctgaacagcgtagtcgatggataacgggttaaaattcc 1020 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 61 aatac 65 ||||| Sbjct: 548 aatac 552
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 216 bits (109), Expect = 6e-53 Identities = 195/224 (87%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 127 bits (64), Expect = 4e-26 Identities = 136/160 (85%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||||||||||||||||| |||||| |||||||| ||||||| |||||| |||| | Sbjct: 2837 ccaaggtttcctccgcaaggctcgtccgcggagggtcagtcaggacctaaggcgaggctg 2896 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 ||| |||||||||||||| ||| ||| || ||||| |||| Sbjct: 2897 aaaagcgtagtcgatggataacgggttaacattcccgtac 2936 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| |||||||| | || |||||||| |||||||||||||| Sbjct: 2402 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactctg 2461 Query: 61 aatac 65 ||||| Sbjct: 2462 aatac 2466
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 216 bits (109), Expect = 6e-53 Identities = 199/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 99.6 bits (50), Expect = 1e-17 Identities = 119/142 (83%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| ||||||||||||||||||| || ||| | ||||||||| | |||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacaccccgaaa 927 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 || |||| ||||||||| ||||||||||||||||||| |||| || |||||| ||| Sbjct: 928 ccctaagggttcctccgccaggttcgtccacggagggttagtcgggtcctaaggcgaggt 987 Query: 519 cgaaaggcgtagtcgatggaca 540 |||| ||||||||||||||||| Sbjct: 988 cgaagggcgtagtcgatggaca 1009 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 216 bits (109), Expect = 6e-53 Identities = 195/224 (87%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 216 bits (109), Expect = 6e-53 Identities = 195/224 (87%) Strand = Plus / Minus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 3328322 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 3328381 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 3328382 agaggcgtagtcgatggacaaccggtcaatattccggtact 3328422 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Minus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 2450406 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 2450347 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 2450346 agaggcgtagtcgatggacaaccggtcaatattccggtact 2450306 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 3327886 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 3327945 Query: 61 aatac 65 ||||| Sbjct: 3327946 aatac 3327950 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 2450842 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 2450783 Query: 61 aatac 65 ||||| Sbjct: 2450782 aatac 2450778
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 154/169 (91%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| |||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 |||||||||||||||||||||||| ||| ||| |||||||| |||| Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894 Score = 210 bits (106), Expect = 4e-51 Identities = 189/217 (87%) Strand = Plus / Plus Query: 114 tgggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaa 173 ||||||||||||| ||| ||| ||||||||||||||| | |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 174 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 233 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 234 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 293 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 294 gaacggggctaagcgatctgccgaagctgtgggatgt 330 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| | Sbjct: 1318 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactaag 1377 Query: 61 aatacta 67 ||||||| Sbjct: 1378 aatacta 1384
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 214 bits (108), Expect = 2e-52 Identities = 194/223 (86%) Strand = Plus / Plus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 |||||||||| ||||||||||||| |||||||||||||| |||||||| | ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 214 bits (108), Expect = 2e-52 Identities = 194/223 (86%) Strand = Plus / Minus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 |||||||||| ||||||||||||| |||||||||||||| |||||||| | ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 283 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 2313648 Query: 512 atcaggccgaaaggcgtagtcgatggaca 540 ||||||| |||||||||||||||||| Sbjct: 2313649 gcgaggccgacaggcgtagtcgatggaca 2313677 Score = 161 bits (81), Expect = 3e-36 Identities = 132/149 (88%) Strand = Plus / Minus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||||||||||| |||| ||| ||||||||||| ||| |||| |||| || |||||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaaggttcgtccgcggggggttagtcgggacctaag 1108199 Query: 512 atcaggccgaaaggcgtagtcgatggaca 540 ||||||| |||||||||||||||||| Sbjct: 1108198 gcgaggccgacaggcgtagtcgatggaca 1108170
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 214 bits (108), Expect = 2e-52 Identities = 197/227 (86%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | ||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| ||||| || Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||||||||||||||| |||||| ||||||| |||||||||||||| Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||| || || |||||||||||| ||||||| | Sbjct: 848 ggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaag 907 Query: 61 aatactag 68 |||||||| Sbjct: 908 aatactag 915 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccg 358 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 212 bits (107), Expect = 1e-51 Identities = 107/107 (100%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 48 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 107 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 212 bits (107), Expect = 1e-51 Identities = 182/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||||||||| ||||||||||||||||||||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 281 ttgcgctgaagatgaacggggctaag 306 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 || |||| || |||| |||||||| |||| |||||| ||||||||||||| ||||||||| Sbjct: 918 cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||| |||||| ||||||||||||||||| ||| || ||||| ||||| Sbjct: 978 gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 61 aatactagat 70 ||||| |||| Sbjct: 547 aataccagat 556
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 212 bits (107), Expect = 1e-51 Identities = 122/127 (96%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 47123 ggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctg 47182 Query: 61 aatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggggga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 47183 aatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatggggga 47242 Query: 121 taagctt 127 ||||||| Sbjct: 47243 taagctt 47249
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 210 bits (106), Expect = 4e-51 Identities = 195/225 (86%) Strand = Plus / Minus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 186 bits (94), Expect = 5e-44 Identities = 151/170 (88%) Strand = Plus / Minus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || |||||| Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||||||||||||||||||||||||||| |||||||||||| ||||| Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 61 aatac 65 ||||| Sbjct: 2333890 aatac 2333886
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Plus Query: 396 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 455 |||| |||| |||||||||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058 Query: 456 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 515 |||||| ||||||||||| | ||||||||||||||||||||||||||||||||||| | Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118 Query: 516 ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||| |||| |||||||||||||| |||||| |||||||||||||| Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164 Score = 157 bits (79), Expect = 5e-35 Identities = 214/256 (83%), Gaps = 5/256 (1%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| | ||||||||||||| | ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtccagtgatcc 2888 Query: 282 tgcgctgaagatgaacggggctaagcgatc-tgccgaagctgtgggatgtcaaaatgcat 340 ||||| ||| ||||| ||| || || ||| ||||||||||||||||||| || ||| Sbjct: 2889 tgcgccgaaaatgaatgggacttag-tatcttgccgaagctgtgggatgtttaa---cat 2944 Query: 341 cggtaggggagcgttc 356 |||||||||||||||| Sbjct: 2945 cggtaggggagcgttc 2960 Score = 101 bits (51), Expect = 2e-18 Identities = 63/67 (94%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| Sbjct: 2629 ggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcgaggcaaactctg 2688 Query: 61 aatacta 67 ||||||| Sbjct: 2689 aatacta 2695
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 208 bits (105), Expect = 1e-50 Identities = 194/224 (86%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctg 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551 Score = 65.9 bits (33), Expect = 1e-07 Identities = 120/149 (80%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 |||||| |||||| ||||||||||||||||||| || ||| | ||||||||| | | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatgtatgtgagaatcatacac 920 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| || |||| |||| || |||||||||||| |||| |||| || |||||| Sbjct: 921 cccgaaaccctaagggttccagagccaggttcgtccactctgggttagtcgggacctaag 980 Query: 512 atcaggccgaaaggcgtagtcgatggaca 540 |||||||| ||||||||||||||||| Sbjct: 981 gcgaggccgaacggcgtagtcgatggaca 1009
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 208 bits (105), Expect = 1e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagct 321 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 513 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| | Sbjct: 871 ggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaag 930 Query: 61 aatactaga 69 ||||||||| Sbjct: 931 aatactaga 939 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 527 gtagtcgatggacaacaggtcaatattcctgtact 561 |||||||||||| ||||||| |||||||||||||| Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255 Score = 167 bits (84), Expect = 5e-38 Identities = 188/223 (84%) Strand = Plus / Minus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 151413 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 151354 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 151353 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 151294 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 151293 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 151234 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 151233 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 151191 Score = 167 bits (84), Expect = 5e-38 Identities = 188/223 (84%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 42790 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 42849 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 42850 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 42909 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 42910 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 42969 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 42970 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 43012 Score = 67.9 bits (34), Expect = 3e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Minus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 151498 ggggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactca 151439 Query: 60 gaatac 65 |||||| Sbjct: 151438 gaatac 151433 Score = 67.9 bits (34), Expect = 3e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 42705 ggggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactca 42764 Query: 60 gaatac 65 |||||| Sbjct: 42765 gaatac 42770
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 208 bits (105), Expect = 1e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagct 321 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Plus Query: 342 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 401 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 402 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 461 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209 Query: 462 caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 513 |||| ||||||| | ||||||||||| ||||||||||||||| |||||||| Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261 Score = 89.7 bits (45), Expect = 9e-15 Identities = 63/69 (91%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||| |||||||||||||||||||| ||||||||||||||| |||||||| | Sbjct: 2753 ggggtaaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaag 2812 Query: 61 aatactaga 69 ||||||||| Sbjct: 2813 aatactaga 2821 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 527 gtagtcgatggacaacaggtcaatattcctgtact 561 |||||||||||| ||||||| |||||||||||||| Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 208 bits (105), Expect = 1e-50 Identities = 105/105 (100%) Strand = Plus / Plus Query: 474 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 533 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60 Query: 534 atggacaacaggtcaatattcctgtactaccccttgttggtacgg 578 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 atggacaacaggtcaatattcctgtactaccccttgttggtacgg 105
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 1e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| |||||| Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 | ||||| || ||||| ||||||||| ||||||| ||||||||||||| Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427 Score = 167 bits (84), Expect = 5e-38 Identities = 188/223 (84%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 962 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1021 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1022 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1081 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1082 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1141 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 324 ||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1142 tgcgccgataatggccgggactaagtgacctgccgaagctgtg 1184 Score = 67.9 bits (34), Expect = 3e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 877 ggggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactca 936 Query: 60 gaatac 65 |||||| Sbjct: 937 gaatac 942
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 1e-50 Identities = 144/157 (91%) Strand = Plus / Plus Query: 406 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346 Query: 466 gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 525 | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| ||||| Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406 Query: 526 cgtagtcgatggacaacaggtcaatattcctgtacta 562 ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443 Score = 168 bits (85), Expect = 1e-38 Identities = 189/224 (84%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 |||||||||| ||||||||||||||||| ||| ||||||||||||||| | |||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 |||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| || Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgttct 1157 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 ||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1158 tgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| Sbjct: 893 ggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactca 952 Query: 60 gaatactagatatg 73 |||||| ||||||| Sbjct: 953 gaatacaagatatg 966
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 206 bits (104), Expect = 6e-50 Identities = 187/215 (86%) Strand = Plus / Plus Query: 114 tgggggataagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaa 173 ||||||||||||||||| ||| | ||||||||||||| | ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 174 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 233 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 234 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 293 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 294 gaacggggctaagcgatctgccgaagctgtgggat 328 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 170 bits (86), Expect = 3e-39 Identities = 149/170 (87%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||| ||||| ||||||| | ||||| ||||||| |||||| Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450 Score = 77.8 bits (39), Expect = 4e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| | Sbjct: 903 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaactaag 962 Query: 61 aatacta 67 ||||||| Sbjct: 963 aatacta 969
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| |||| |||||| ||||||||||||| || |||| |||||||||||||| |||| Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||| ||||||||||||||| ||||||| |||||||||||||| Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034 Score = 103 bits (52), Expect = 6e-19 Identities = 153/187 (81%) Strand = Plus / Plus Query: 138 agggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 197 ||||||||||||| | ||||||||||||||||||||||| || || |||| |||||| | Sbjct: 1346 agggaaacagcccagatcaccagctaaggcccctaaatggccactaagtggaaaaggatg 1405 Query: 198 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 257 || | |||| | ||| ||||||||||||| |||||||||| | |||||||||||| ||| Sbjct: 1406 tgagaatgcataaacaaccaggaggtttgcttagaagcagcaatcctttaaagagttcgt 1465 Query: 258 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 317 || || ||||| | |||| ||||||| ||| || | |||| ||||| | ||||||| Sbjct: 1466 aacagaacactggtaaagcgttcttgcgccgaaaataaccgggactaagtggcctgccga 1525 Query: 318 agctgtg 324 ||||||| Sbjct: 1526 agctgtg 1532 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 3 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 62 ||||||||||||||||| | ||||||||| || |||||||| ||| |||||||||||| Sbjct: 1226 ggtaaagcactgtttcgatacgggctgcgaaagtggtaccaagtcgtagcaaactctgaa 1285 Query: 63 tac 65 ||| Sbjct: 1286 tac 1288
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 2e-49 Identities = 148/163 (90%) Strand = Plus / Plus Query: 399 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 458 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377 Query: 459 acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 518 ||| || ||||||| | ||||||||||| || |||||||||||| |||||||| |||| Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437 Query: 519 cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480 Score = 123 bits (62), Expect = 7e-25 Identities = 157/189 (83%) Strand = Plus / Plus Query: 136 agagggaaacagcccggntcaccagctaaggcccctaaatgaccgctcagtgataaagga 195 ||||||||||||||| | ||| ||||||||||||||||||| | || |||| |||||| Sbjct: 1024 agagggaaacagcccagatcattagctaaggcccctaaatgatcactaagtggaaaagga 1083 Query: 196 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 255 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1084 tgtgagaatgcccaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1143 Query: 256 gtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 315 |||||||||||||| | |||| |||||| || ||| |||| ||||| |||||||| Sbjct: 1144 gtaatagctcactggtaaagcgtttttgcgccgacaatggccgggactaagtgatctgcc 1203 Query: 316 gaagctgtg 324 ||||||||| Sbjct: 1204 gaagctgtg 1212 Score = 67.9 bits (34), Expect = 3e-08 Identities = 59/66 (89%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 906 ggggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactca 965 Query: 60 gaatac 65 |||||| Sbjct: 966 gaatac 971 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 atcggtaggggagcgttccg 358 |||||||||||||||||||| Sbjct: 1259 atcggtaggggagcgttccg 1278
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 2e-49 Identities = 157/175 (89%) Strand = Plus / Plus Query: 387 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 446 |||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555 Query: 447 aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 506 ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| | Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615 Query: 507 ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 |||||| |||||||||||||| ||||||||| |||||| |||||||||||||| Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| | ||||||||| ||||||||||| ||| ||||||||| | Sbjct: 997 ggggtaaagcactgtttcgatacgggctgcgaaagcggtaccaagtcgtggcaaactcag 1056 Query: 61 aatactaga 69 ||||||||| Sbjct: 1057 aatactaga 1065 Score = 71.9 bits (36), Expect = 2e-09 Identities = 140/173 (80%), Gaps = 4/173 (2%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatc-gtcgagagggaaacagcccggntcacca 159 ||||||||||| | |||||||||||| | | ||| ||||||||||||||| | |||||| Sbjct: 1081 gccagtgagactacgggggataagctccgtatgtcaagagggaaacagcccagatcacca 1140 Query: 160 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 219 | ||||||||| ||||| | || |||| |||||| ||| | ||| | ||| ||||| Sbjct: 1141 gataaggccccaaaatggtcactaagtggaaaaggatgtgagaatgcttaaacaaccagg 1200 Query: 220 aggtttgcctagaagcagc---caccctttaaagagtgcgtaatagctcactg 269 ||||| || |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1201 aggttcgcttagaagcagctatcttccttgaaagagtgcgtaatagctcactg 1253
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 202 bits (102), Expect = 9e-49 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 135 bits (68), Expect = 2e-28 Identities = 137/160 (85%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 |||||| |||||||| |||| |||||| |||||||| |||| || |||||| |||||| Sbjct: 926 ccaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtac 560 |||||||||||||||||||||| ||| |||||||| |||| Sbjct: 986 aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 202 bits (102), Expect = 9e-49 Identities = 179/205 (87%) Strand = Plus / Plus Query: 103 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagct 162 ||||||||| ||||||||||||| ||| ||||||||||||||||||| | |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 163 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 222 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 223 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 282 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 283 gcgctgaagatgaacggggctaagc 307 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 157 bits (79), Expect = 5e-35 Identities = 145/167 (86%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||| || |||| |||||||| ||||||||||| |||||||| || | || |||||| Sbjct: 907 tccgaaaccctaagggttcctccggaaggttcgtccgcggagggttagccgggacctaag 966 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgt 558 | |||||| ||||||||||||||| ||||||| |||||||||| Sbjct: 967 gcgaagccgaagggcgtagtcgatggataacaggtgtatattcctgt 1013 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 61 aatac 65 ||||| Sbjct: 545 aatac 549
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 202 bits (102), Expect = 9e-49 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 101 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccag 160 |||||| ||||| || |||||||||| ||||||||||||||||||||||| | |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 161 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 220 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 221 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 280 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 281 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 121 bits (61), Expect = 3e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 ||||||| || |||| |||||||| |||| |||||| |||||||| |||| || |||||| Sbjct: 915 cccgaaaccctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaag 974 Query: 512 atcaggccgaaaggcgtagtcgatggaca 540 | |||||| ||||||||||||||||| Sbjct: 975 gcgaagccgaagggcgtagtcgatggaca 1003 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcag 546 Query: 61 aatac 65 ||||| Sbjct: 547 aatac 551
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 9e-49 Identities = 147/162 (90%) Strand = Plus / Plus Query: 400 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 459 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479 Query: 460 cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 519 || |||| ||||||| | |||||||||| || |||||||||||| |||||| |||||| Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539 Query: 520 gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 ||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581 Score = 129 bits (65), Expect = 1e-26 Identities = 142/168 (84%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||| || |||||||||||| || || ||||||||||||||| | |||||||| Sbjct: 1007 ccagtgagaaaatcggggataagcttgattttcaagagggaaacagcccagatcaccagc 1066 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||||||| ||||| || |||| |||||| ||||| ||| | ||| ||||||| Sbjct: 1067 taaggccccaaaatggtgactaagtggaaaaggatgtgggaatgctgaaacaaccaggag 1126 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1127 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactg 1174 Score = 83.8 bits (42), Expect = 6e-13 Identities = 64/70 (91%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||||||||||||||| || |||||||| ||| |||||||||| Sbjct: 921 ggggtaaagcgactgtttcggtgcgggctgcgaaagtggtaccaagtcgtggcaaactct 980 Query: 60 gaatactaga 69 |||||||||| Sbjct: 981 gaatactaga 990
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 200 bits (101), Expect = 4e-48 Identities = 194/224 (86%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| | ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 325 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 161 bits (81), Expect = 3e-36 Identities = 141/161 (87%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 924 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 983 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 | |||||||||||||||||||| |||||||||||| ||||| Sbjct: 984 agaggcgtagtcgatggacaaccggtcaatattccggtact 1024 Score = 73.8 bits (37), Expect = 6e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 489 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 548 Query: 61 aatac 65 ||||| Sbjct: 549 aatac 553
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 200 bits (101), Expect = 4e-48 Identities = 151/168 (89%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| | Sbjct: 881 ggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaag 940 Query: 61 aatact 66 |||||| Sbjct: 941 aatact 946
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 200 bits (101), Expect = 4e-48 Identities = 151/168 (89%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 269 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Plus Query: 392 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 451 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 452 cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 511 |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| |||||| Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118 Query: 512 atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 561 || |||||||| ||||||||||| |||||||||| ||||||||||| Sbjct: 3119 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 3168 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||||| | ||||||||||||||| ||||||| | Sbjct: 2619 ggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaatcgttgcaaactaag 2678 Query: 61 aatact 66 |||||| Sbjct: 2679 aatact 2684
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 198 bits (100), Expect = 1e-47 Identities = 196/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||| ||||| || |||||||||| ||||||||||||||||||||||| | | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcct 556 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| | Sbjct: 486 ggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaag 545 Query: 61 aatact 66 |||||| Sbjct: 546 aatact 551
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 198 bits (100), Expect = 1e-47 Identities = 196/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 102 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggntcaccagc 161 ||||| ||||| || |||||||||| ||||||||||||||||||||||| | | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 162 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 221 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 222 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 281 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 282 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 328 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 127 bits (64), Expect = 4e-26 Identities = 133/156 (85%) Strand = Plus / Plus Query: 401 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 460 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 461 ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 520 | |||| |||||||| |||| |||||| |||||||| ||||||| |||||| |||||| Sbjct: 930 ctaagggttcctccggaaggctcgtccgcggagggttagtcaggacctaaggcgaggccg 989 Query: 521 aaaggcgtagtcgatggacaacaggtcaatattcct 556 |||||||||||||||||||| |||| ||||||||| Sbjct: 990 aaaggcgtagtcgatggacatgaggttaatattcct 1025 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 1 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 60 ||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| | Sbjct: 486 ggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaag 545 Query: 61 aatact 66 |||||| Sbjct: 546 aatact 551
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Plus Query: 412 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 471 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508 Query: 472 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 531 ||| | ||||||||||| || |||| ||||||| |||||||||||||| || ||||| || Sbjct: 3509 tccactaggttcgtccatggggggttagtcaggacctaagatcaggccaaacggcgtcgt 3568 Query: 532 cgatggacaacaggtcaatattcctgtacta 562 ||||||| ||||||| ||||||||||||||| Sbjct: 3569 cgatggaaaacaggttaatattcctgtacta 3599 Score = 151 bits (76), Expect = 3e-33 Identities = 171/203 (84%) Strand = Plus / Plus Query: 122 aagcttcatcgtcgagagggaaacagcccggntcaccagctaaggcccctaaatgaccgc 181 ||||||||| ||| ||||||||||||||| | ||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 182 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 241 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 242 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 301 |||| ||||||||||||||||||||||| | |||| ||||||| || ||| |||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccggga 2886 Query: 302 ctaagcgatctgccgaagctgtg 324 ||||| || |||||||||||||| Sbjct: 2887 ctaagtgacctgccgaagctgtg 2909 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 59 |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| Sbjct: 886 ggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactca 945 Query: 60 gaatactagatatg 73 |||||| ||||||| Sbjct: 946 gaatacaagatatg 959 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,336,318 Number of Sequences: 3902068 Number of extensions: 3336318 Number of successful extensions: 60608 Number of sequences better than 10.0: 2470 Number of HSP's better than 10.0 without gapping: 2500 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 46256 Number of HSP's gapped (non-prelim): 13644 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
