ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd16b16 |
|---|---|
| Clone Library Name | barley_pub |
>APK1B_ARATH (P46573) Protein kinase APK1B, chloroplast precursor (EC 2.7.11.1)| Length = 412 Score = 120 bits (301), Expect = 3e-27 Identities = 56/72 (77%), Positives = 66/72 (91%) Frame = +2 Query: 362 RSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGM 541 R+EGEIL+S N+K+FTF EL+ ATRNFRPDSVLGEGGFGSVFKGWIDE+TL +KPGTG+ Sbjct: 43 RTEGEILQSPNLKSFTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGV 102 Query: 542 VIAVKKLNQESY 577 VIAVKKLNQ+ + Sbjct: 103 VIAVKKLNQDGW 114
>NAK_ARATH (P43293) Probable serine/threonine-protein kinase NAK (EC 2.7.11.1)| Length = 389 Score = 117 bits (294), Expect = 2e-26 Identities = 53/72 (73%), Positives = 67/72 (93%) Frame = +2 Query: 362 RSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGM 541 R+EGEIL++AN+K F+ +EL++ATRNFRPDSV+GEGGFG VFKGWIDE +LAP+KPGTG+ Sbjct: 42 RTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGI 101 Query: 542 VIAVKKLNQESY 577 VIAVK+LNQE + Sbjct: 102 VIAVKRLNQEGF 113
>APK1A_ARATH (Q06548) Protein kinase APK1A, chloroplast precursor (EC 2.7.11.1)| Length = 410 Score = 116 bits (291), Expect = 4e-26 Identities = 53/72 (73%), Positives = 66/72 (91%) Frame = +2 Query: 362 RSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGM 541 R+EGEIL+S N+K+F+F EL++ATRNFRPDSVLGEGGFG VFKGWIDEK+L ++PGTG+ Sbjct: 42 RTEGEILQSPNLKSFSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGL 101 Query: 542 VIAVKKLNQESY 577 VIAVKKLNQ+ + Sbjct: 102 VIAVKKLNQDGW 113
>CX32_ARATH (P27450) Probable serine/threonine-protein kinase Cx32, chloroplast| precursor (EC 2.7.11.1) Length = 419 Score = 97.8 bits (242), Expect = 2e-20 Identities = 39/68 (57%), Positives = 59/68 (86%) Frame = +2 Query: 371 GEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIA 550 G++LES N+K + F +L+TAT+NF+PDS+LG+GGFG V++GW+D TLAP++ G+GM++A Sbjct: 63 GKLLESPNLKVYNFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVA 122 Query: 551 VKKLNQES 574 +K+LN ES Sbjct: 123 IKRLNSES 130
>PBS1_ARATH (Q9FE20) Serine/threonine-protein kinase PBS1 (EC 2.7.11.1)| (AvrPphB susceptible protein 1) Length = 456 Score = 55.5 bits (132), Expect = 1e-07 Identities = 28/55 (50%), Positives = 35/55 (63%) Frame = +2 Query: 404 FTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQ 568 F F EL AT NF PD+ LGEGGFG V+KG +D TG V+AVK+L++ Sbjct: 74 FAFRELAAATMNFHPDTFLGEGGFGRVYKGRLD---------STGQVVAVKQLDR 119
>RLCK7_ARATH (Q9LQQ8) Probable serine/threonine-protein kinase RLCKVII (EC| 2.7.11.1) Length = 423 Score = 51.2 bits (121), Expect = 2e-06 Identities = 27/57 (47%), Positives = 35/57 (61%) Frame = +2 Query: 398 KAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQ 568 + FTF EL AT NFR D LGEGGFG VFKG I++ V+A+K+L++ Sbjct: 89 QTFTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEK---------LDQVVAIKQLDR 136
>IRAK4_HUMAN (Q9NWZ3) Interleukin-1 receptor-associated kinase 4 (EC 2.7.11.1)| (IRAK-4) (NY-REN-64 antigen) Length = 460 Score = 47.0 bits (110), Expect = 4e-05 Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 8/76 (10%) Frame = +2 Query: 368 EGEILESANVK--AFTFNELRTATRNF--RPDSV----LGEGGFGSVFKGWIDEKTLAPT 523 E + LE ++ + +F+F EL+ T NF RP SV +GEGGFG V+KG+++ T+A Sbjct: 154 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVK 213 Query: 524 KPGTGMVIAVKKLNQE 571 K + I ++L Q+ Sbjct: 214 KLAAMVDITTEELKQQ 229
>BAK1_ARATH (Q94F62) BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1| precursor (EC 2.7.11.1) (BRI1-associated receptor kinase 1) (Somatic embryogenesis receptor-like kinase 3) Length = 615 Score = 44.7 bits (104), Expect = 2e-04 Identities = 25/72 (34%), Positives = 38/72 (52%) Frame = +2 Query: 356 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGT 535 V E + +K F+ EL+ A+ NF ++LG GGFG V+KG + + TL Sbjct: 261 VPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTL------- 313 Query: 536 GMVIAVKKLNQE 571 +AVK+L +E Sbjct: 314 ---VAVKRLKEE 322
>IRAK4_MOUSE (Q8R4K2) Interleukin-1 receptor-associated kinase 4 (EC 2.7.11.1)| (IRAK-4) Length = 459 Score = 44.3 bits (103), Expect = 3e-04 Identities = 26/72 (36%), Positives = 46/72 (63%), Gaps = 8/72 (11%) Frame = +2 Query: 380 LESANVK--AFTFNELRTATRNF--RPDSV----LGEGGFGSVFKGWIDEKTLAPTKPGT 535 +ES++ + +F+F+EL++ T NF +P S +GEGGFG V+KG ++ +A K G Sbjct: 158 VESSDTRFHSFSFHELKSITNNFDEQPASAGGNRMGEGGFGVVYKGCVNNTIVAVKKLGA 217 Query: 536 GMVIAVKKLNQE 571 + I+ ++L Q+ Sbjct: 218 MVEISTEELKQQ 229
>TMK1_ARATH (P43298) Putative receptor protein kinase TMK1 precursor (EC| 2.7.11.1) Length = 942 Score = 42.0 bits (97), Expect = 0.001 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +2 Query: 374 EILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAV 553 +++E+ N+ + LR+ T NF D++LG GGFG V+KG + + T K VIA Sbjct: 567 QMVEAGNM-LISIQVLRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAG 625 Query: 554 K 556 K Sbjct: 626 K 626
>BRL3_ARATH (Q9LJF3) Serine/threonine-protein kinase BRI1-like 3 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 3) Length = 1164 Score = 41.2 bits (95), Expect = 0.002 Identities = 23/58 (39%), Positives = 30/58 (51%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQ 568 ++ TF L AT F DS++G GGFG V+K K G V+A+KKL Q Sbjct: 843 LRKLTFAHLLEATNGFSADSMIGSGGFGDVYK----------AKLADGSVVAIKKLIQ 890
>BRI1_LYCPE (Q8L899) Systemin receptor SR160 precursor (EC 2.7.11.1)| (Brassinosteroid LRR receptor kinase) Length = 1207 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKL 562 ++ TF +L AT F DS++G GGFG V+K + + G V+A+KKL Sbjct: 873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD----------GSVVAIKKL 918
>BRI1_LYCES (Q8GUQ5) Brassinosteroid LRR receptor kinase precursor (EC 2.7.11.1)| (tBRI1) (Altered brassinolide sensitivity 1) (Systemin receptor SR160) Length = 1207 Score = 40.8 bits (94), Expect = 0.003 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKL 562 ++ TF +L AT F DS++G GGFG V+K + + G V+A+KKL Sbjct: 873 LRKLTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKD----------GSVVAIKKL 918
>NORK_PEA (Q8LKZ1) Nodulation receptor kinase precursor (EC 2.7.11.1)| Length = 924 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/42 (40%), Positives = 30/42 (71%) Frame = +2 Query: 380 LESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDE 505 ++S +VK FT + AT ++ +++GEGGFGSV++G +D+ Sbjct: 577 IKSVSVKPFTLEYIELATEKYK--TLIGEGGFGSVYRGTLDD 616
>NORK_MEDTR (Q8L4H4) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does| not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) Length = 925 Score = 40.4 bits (93), Expect = 0.004 Identities = 17/42 (40%), Positives = 30/42 (71%) Frame = +2 Query: 380 LESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDE 505 ++S +VK FT + AT ++ +++GEGGFGSV++G +D+ Sbjct: 578 IKSVSVKPFTLEYIEQATEQYK--TLIGEGGFGSVYRGTLDD 617
>BRI1_ARATH (O22476) BRASSINOSTEROID INSENSITIVE 1 precursor (EC 2.7.11.1)| (AtBRI1) (Brassinosteroid LRR receptor kinase) Length = 1196 Score = 39.3 bits (90), Expect = 0.008 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKL 562 ++ TF +L AT F DS++G GGFG V+K + + G +A+KKL Sbjct: 868 LRKLTFADLLQATNGFHNDSLIGSGGFGDVYKAILKD----------GSAVAIKKL 913
>CRI4_MAIZE (O24585) Putative receptor protein kinase CRINKLY4 precursor (EC| 2.7.11.1) Length = 901 Score = 38.5 bits (88), Expect = 0.014 Identities = 19/51 (37%), Positives = 28/51 (54%) Frame = +2 Query: 374 EILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTK 526 E L+ + F++ EL AT F DS +G+G F VFKG + + T+ K Sbjct: 483 EDLKIRRAQEFSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVK 533
>BRL1_ARATH (Q9ZWC8) Serine/threonine-protein kinase BRI1-like 1 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 1) Length = 1166 Score = 37.0 bits (84), Expect = 0.041 Identities = 19/56 (33%), Positives = 30/56 (53%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKL 562 ++ TF L AT F ++++G GGFG V+K + + G V+A+KKL Sbjct: 844 LRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRD----------GSVVAIKKL 889
>KPEL_DROME (Q05652) Probable serine/threonine-protein kinase pelle (EC| 2.7.11.1) Length = 501 Score = 37.0 bits (84), Expect = 0.041 Identities = 19/46 (41%), Positives = 27/46 (58%) Frame = +2 Query: 356 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKG 493 VQR+ +LE + EL AT + PD+ LG+GGFG V++G Sbjct: 191 VQRAAESLLE------IDYAELENATDGWSPDNRLGQGGFGDVYRG 230
>BRL2_ARATH (Q9ZPS9) Serine/threonine-protein kinase BRI1-like 2 precursor (EC| 2.7.11.1) (BRASSINOSTEROID INSENSITIVE 1-like protein 2) (Protein VASCULAR HIGHWAY 1) Length = 1143 Score = 35.4 bits (80), Expect = 0.12 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKL 562 ++ F++L AT F S++G GGFG VFK + + G +A+KKL Sbjct: 823 LRKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKD----------GSSVAIKKL 868
>PSKR_ARATH (Q9ZVR7) Putative phytosulfokine receptor precursor (EC 2.7.11.1)| (Phytosulfokine LRR receptor kinase) Length = 1008 Score = 35.0 bits (79), Expect = 0.16 Identities = 18/63 (28%), Positives = 35/63 (55%) Frame = +2 Query: 377 ILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVK 556 +L +N K ++++L +T +F +++G GGFG V+K + + G +A+K Sbjct: 713 VLFQSNDKELSYDDLLDSTNSFDQANIIGCGGFGMVYKATLPD----------GKKVAIK 762 Query: 557 KLN 565 KL+ Sbjct: 763 KLS 765
>SIRK_ARATH (O64483) Senescence-induced receptor-like serine/threonine-protein| kinase precursor (FLG22-induced receptor-like kinase 1) Length = 876 Score = 34.3 bits (77), Expect = 0.26 Identities = 21/57 (36%), Positives = 32/57 (56%) Frame = +2 Query: 404 FTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQES 574 F ++E+ T NF + V+G+GGFG V+ G I+ G +AVK L++ES Sbjct: 564 FKYSEVVNITNNF--ERVIGKGGFGKVYHGVIN-----------GEQVAVKVLSEES 607
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 33.1 bits (74), Expect = 0.59 Identities = 20/49 (40%), Positives = 28/49 (57%) Frame = +2 Query: 428 ATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQES 574 AT NF + LG+GGFG V+KG + + G IAVK+L++ S Sbjct: 524 ATENFSSCNKLGQGGFGIVYKGRLLD----------GKEIAVKRLSKTS 562
>HIPK4_RAT (Q4V793) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 455 VLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQESY 577 VLG+G FG V KGW + TG ++A+K L ++Y Sbjct: 16 VLGKGTFGEVAKGW---------RRSTGEMVAIKILKNDAY 47
>HIPK4_MACFA (Q8WP28) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 455 VLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQESY 577 VLG+G FG V KGW + TG ++A+K L ++Y Sbjct: 16 VLGKGTFGEVAKGW---------RRSTGEMVAIKILKNDAY 47
>HIPK4_HUMAN (Q8NE63) Homeodomain-interacting protein kinase 4 (EC 2.7.11.1)| Length = 616 Score = 32.0 bits (71), Expect = 1.3 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = +2 Query: 455 VLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQESY 577 VLG+G FG V KGW + TG ++A+K L ++Y Sbjct: 16 VLGKGTFGEVAKGW---------RRSTGEMVAIKILKNDAY 47
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 32.0 bits (71), Expect = 1.3 Identities = 19/33 (57%), Positives = 19/33 (57%), Gaps = 4/33 (12%) Frame = -2 Query: 208 GRAGSSGPQIEP----PPGMEQPAGR*ENPSNR 122 GR G GPQ E PPGM PAGR E PS R Sbjct: 52 GRDGKEGPQGEKGDPGPPGMPGPAGR-EGPSGR 83
>EXS_ARATH (Q9LYN8) Leucine-rich repeat receptor protein kinase EXS precursor| (EC 2.7.11.1) (Extra sporogenous cells protein) (EXCESS MICROSPOROCYTES1 protein) Length = 1192 Score = 32.0 bits (71), Expect = 1.3 Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Frame = +2 Query: 428 ATRNFRPDSVLGEGGFGSVFKGWI-DEKTLAPTK 526 AT +F +++G+GGFG+V+K + EKT+A K Sbjct: 913 ATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKK 946
>TRUA_PYRHO (O58941) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine| isomerase I) (tRNA pseudouridylate synthase I) Length = 262 Score = 31.2 bits (69), Expect = 2.2 Identities = 15/36 (41%), Positives = 23/36 (63%) Frame = +2 Query: 356 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLG 463 V+ EGEI+++ N FNEL++A+R + S LG Sbjct: 23 VRTVEGEIIKALNNSGIMFNELKSASRTDKGVSALG 58
>REPS2_MOUSE (Q80XA6) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 521 Score = 30.8 bits (68), Expect = 2.9 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -2 Query: 226 AVPHGQGRAGSSGPQIEPPPGMEQPAGR*ENPSNRSIGRTEPRRTA 89 ++ HG + S Q+ P P QP G+ E PS+ G RR A Sbjct: 67 SLSHGYSKLRSGTEQMHPAPYERQPIGQPEGPSSEGPGAKPFRRQA 112
>MDR15_ARATH (Q9C7F8) Putative multidrug resistance protein 15 (P-glycoprotein 13)| Length = 1245 Score = 30.4 bits (67), Expect = 3.8 Identities = 20/54 (37%), Positives = 27/54 (50%) Frame = +2 Query: 395 VKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVK 556 V AF+ +E T PD V G GSVF+ E ++P +P + MV VK Sbjct: 952 VTAFSVSETLALT----PDIVKGTQALGSVFRVLHRETKISPDQPNSRMVSQVK 1001
>RPOA_DESDG (Q30Z68) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP| alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) Length = 348 Score = 30.4 bits (67), Expect = 3.8 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2 Query: 356 VQRSEGEILESANVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEK 508 VQ+SEGE+L++ N + +E+R D + GF ++ W+ K Sbjct: 293 VQKSEGEMLKTKNFGRKSLDEIRRVLGEMSLDFGMKVDGFEKKYQEWLKRK 343
>SFTPD_BOVIN (P35246) Pulmonary surfactant-associated protein D precursor (SP-D)| (PSP-D) Length = 369 Score = 30.0 bits (66), Expect = 5.0 Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 8/49 (16%) Frame = -2 Query: 244 ADLGAPAVPHG----QGRAGSSGPQIEP----PPGMEQPAGR*ENPSNR 122 A + PA P G G AG GP+ + PPGM PAGR E PS + Sbjct: 75 AGMPGPAGPIGLKGDNGSAGEPGPKGDTGPPGPPGMPGPAGR-EGPSGK 122
>IRAK1_MOUSE (Q62406) Interleukin-1 receptor-associated kinase 1 (EC 2.7.11.1)| (IRAK-1) (IRAK) (Pelle-like protein kinase) (mPLK) Length = 710 Score = 30.0 bits (66), Expect = 5.0 Identities = 18/55 (32%), Positives = 27/55 (49%) Frame = +2 Query: 410 FNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQES 574 F E+ T NF + +GEGGFG V++ + T AVK+L +E+ Sbjct: 202 FCEISQGTCNFSEELRIGEGGFGCVYRAVMRNTT-----------YAVKRLKEEA 245
>DRS1_CRYNE (Q5KIK3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 808 Score = 29.6 bits (65), Expect = 6.5 Identities = 11/40 (27%), Positives = 23/40 (57%) Frame = -3 Query: 198 DRAGLKSSRRRGWSSRPVGERTQAIDRSAGRNHGGLRSRP 79 ++AG +++G + R G + A D ++H G+R++P Sbjct: 750 EKAGKGKDKKKGKARRVTGGKGSAFDSEGKKSHEGMRAKP 789
>DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein dumpy-7)| Length = 318 Score = 29.6 bits (65), Expect = 6.5 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%) Frame = -2 Query: 235 GAPAVPHGQGRAGSSGPQIEP----PPGMEQPAGR*ENPSNRSIGRT 107 G P P GR G +GPQ EP PG++ P P + SIG T Sbjct: 171 GLPGRPGKPGRVGDAGPQGEPGEQGEPGIKGP------PGDDSIGGT 211
>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor| Length = 1712 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 4/34 (11%) Frame = -2 Query: 235 GAPAVPHGQGRAGSSGPQIEPP----PGMEQPAG 146 GAP P +G AG SGPQ P PG + P G Sbjct: 1317 GAPGTPGTKGWAGDSGPQGRPGVFGLPGEKGPRG 1350
>KIC1_YEAST (P38692) Serine/threonine-protein kinase KIC1 (EC 2.7.11.1) (Kinase| that interacts with CDC31) (N-rich kinase 1) Length = 1080 Score = 29.3 bits (64), Expect = 8.5 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = +2 Query: 440 FRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQES 574 F+ V+G G FG V+KG+ TG V A+K LN +S Sbjct: 23 FKRTEVIGRGKFGVVYKGY---------NVKTGRVYAIKVLNLDS 58
>SYC_SYNP6 (Q5MZA4) Cysteinyl-tRNA synthetase (EC 6.1.1.16) (Cysteine--tRNA| ligase) (CysRS) Length = 478 Score = 29.3 bits (64), Expect = 8.5 Identities = 11/25 (44%), Positives = 14/25 (56%) Frame = -2 Query: 556 LHSNDHPGARFSWGEGLLIDPPLED 482 LH +H G R W E + +DP L D Sbjct: 329 LHFGEHWGDRLGWTESVTVDPDLSD 353
>PANX2_MOUSE (Q6IMP4) Pannexin-2| Length = 607 Score = 29.3 bits (64), Expect = 8.5 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -2 Query: 241 DLGAPAVPHGQGRAGSSGPQIEPPPGMEQ 155 D GA A H +G G SGP PP E+ Sbjct: 469 DAGARAAHHYKGSGGDSGPSSAPPAASEK 497
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 29.3 bits (64), Expect = 8.5 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = -2 Query: 235 GAPAVPHGQGRAGSSGPQIEPPPGMEQPAG 146 G P +P G+ G +GPQ PPG PAG Sbjct: 599 GGPGLPGPAGKNGETGPQ--GPPGPTGPAG 626
>BUR1_KLULA (Q6CRA9) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 645 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +2 Query: 437 NFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKL 562 N+R + LG+G FG VFKG GT +A+K++ Sbjct: 54 NYREEEKLGQGTFGEVFKG---------IHLGTNRKVAIKRI 86
>AOX_NEUCR (Q01355) Alternative oxidase, mitochondrial precursor (EC 1.-.-.-)| (ALTOX) Length = 362 Score = 29.3 bits (64), Expect = 8.5 Identities = 12/26 (46%), Positives = 18/26 (69%) Frame = -3 Query: 525 LVGARVFSSIHPLKTDPNPPSPSTLS 448 L G+RV +S+HP +T+ + PSP S Sbjct: 33 LAGSRVATSLHPTQTNLSSPSPRNFS 58
>MURG_GEOSL (Q748D6) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 364 Score = 29.3 bits (64), Expect = 8.5 Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 2/42 (4%) Frame = +2 Query: 362 RSEGEILESANVKAFTFN--ELRTATRNFRPDSVLGEGGFGS 481 R +G + + + F + + R + FRPD VLG GG+ S Sbjct: 63 RGKGSLARAKGLAKFLYGYAQSRKILKEFRPDLVLGVGGYAS 104
>MURG_PORGI (Q7MAW5) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)| pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC 2.4.1.227) (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase) Length = 379 Score = 29.3 bits (64), Expect = 8.5 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%) Frame = +2 Query: 377 ILESANVKAFTFNELRTAT---RNFRPDSVLGEGGFGS 481 +L + V +R A RNFRPD V+G GG+ S Sbjct: 76 LLSNYKVAIAVIRSMRLANKTIRNFRPDMVIGVGGYAS 113
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 8.5 Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = -2 Query: 238 LGAPAVPHGQGRAGSSGPQIEP-PPGMEQPAG 146 LG P V G AG GP EP PPG P G Sbjct: 1193 LGPPGVRGSVGEAGPEGPPGEPGPPGPPGPPG 1224 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,623,521 Number of Sequences: 219361 Number of extensions: 1154866 Number of successful extensions: 5322 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 4418 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5279 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4929664480 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
