>RL16_MYCGE (P47404) 50S ribosomal protein L16|
          Length = 138

 Score = 30.8 bits (68), Expect = 0.93
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 23  ACGDLG-ANTRGSWICARTFRSARPASRICC*FDASRRIRLFPAVS 157
           A G+ G   T+G+WI AR   SAR A   C        IR+FP +S
Sbjct: 28  AFGEYGIVATKGNWIDARAIESARVAISKCLGKTGKMWIRIFPHMS 73

>RL16_MYCPN (P41204) 50S ribosomal protein L16|
          Length = 139

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 23  ACGDLG-ANTRGSWICARTFRSARPASRICC*FDASRRIRLFPAVS 157
           A G+ G   T+G+WI AR   SAR A   C        IR+FP +S
Sbjct: 28  AFGEYGLVATKGNWIDARAIESARIAISKCLGKTGKMWIRIFPHMS 73

>DYRK3_DROME (P83102) Putative dual specificity|
           tyrosine-phosphorylation-regulated kinase 3 homolog (EC
           2.7.12.1)
          Length = 828

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/68 (32%), Positives = 31/68 (45%)
 Frame = -1

Query: 204 PTNLPEKTLRPPPRQLETAGNSLIRREASNQQQIRDAGLADRNVRAQIQLPRVFAPRSPQ 25
           PT+LP+  ++   + L   G +    E +N+ Q RD+GL          L R F    P 
Sbjct: 42  PTSLPQIQIQMINQNLTHTGIAQNNTEKANRHQYRDSGLQ--------YLTRCF---EPL 90

Query: 24  AQLTDQKE 1
           A L D KE
Sbjct: 91  AMLNDSKE 98

>DEF2_PROMM (Q7V5F9) Peptide deformylase 2 (EC 3.5.1.88) (PDF 2) (Polypeptide|
           deformylase 2)
          Length = 201

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -1

Query: 195 LPEKTLRPPPRQLETAGNSLIRREASNQQQIRDAGLADRNVR 70
           +P++ L  PP Q+ T GN ++R      Q  R  G  D +VR
Sbjct: 21  VPKEPLDHPPLQIHTLGNGVLR------QSTRRIGKVDESVR 56

>CUBN_MOUSE (Q9JLB4) Cubilin precursor (Intrinsic factor-cobalamin receptor)|
          Length = 3623

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 191  GKFVGSRLPPPRATTALVLIII 256
            G++ G  +PPP ATT   LI++
Sbjct: 1348 GRYCGENIPPPGATTGSKLIVV 1369

>GLYA1_BORPA (Q7W1I6) Serine hydroxymethyltransferase 1 (EC 2.1.2.1) (Serine|
           methylase 1) (SHMT 1)
          Length = 430

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 239 EPLSHEVEADEIPRTCRRK 183
           +P+SH ++ DE+ RT RR+
Sbjct: 159 DPVSHRIDMDEVERTARRE 177

>GLYA1_BORBR (Q7WPH6) Serine hydroxymethyltransferase 1 (EC 2.1.2.1) (Serine|
           methylase 1) (SHMT 1)
          Length = 430

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -2

Query: 239 EPLSHEVEADEIPRTCRRK 183
           +P+SH ++ DE+ RT RR+
Sbjct: 159 DPVSHRIDMDEVERTARRE 177

>EAF7_DEBHA (Q6BKL0) Chromatin modification-related protein EAF7|
          Length = 323

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 16/68 (23%), Positives = 34/68 (50%)
 Frame = -1

Query: 204 PTNLPEKTLRPPPRQLETAGNSLIRREASNQQQIRDAGLADRNVRAQIQLPRVFAPRSPQ 25
           P+   +KT  PP +Q  TA ++  R+++  Q+   D     R+ R+ +       P++P 
Sbjct: 257 PSKRSQKTATPPAQQTPTA-SAKRRKKSEVQESDADKSNTRRSKRSLVPATTPLKPQAPP 315

Query: 24  AQLTDQKE 1
            + + +K+
Sbjct: 316 IRRSSRKK 323


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,700,128
Number of Sequences: 219361
Number of extensions: 595245
Number of successful extensions: 1800
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)