ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14p20 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB063117.1| Hordeum vulgare HvAPX1 mRNA for peroxisome type ascorbate peroxidase, complete cds Length = 1089 Score = 1061 bits (535), Expect = 0.0 Identities = 538/539 (99%) Strand = Plus / Plus Query: 42 cttctagggtcgtccgcgatggcggctccggtggtggacgccgagtacctgcgccaggtc 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cttctagggtcgtccgcgatggcggctccggtggtggacgccgagtacctgcgccaggtc 60 Query: 102 gacagggcgcgccgcgccctccgtgccctcatcgcctccaagggatgcgcccccatcatg 161 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacagggcgcgccgcgccttccgtgccctcatcgcctccaagggatgcgcccccatcatg 120 Query: 162 ctccgcctcgcatggcatgatgctggcacctatgatgtgaacacaagaactggtggtgca 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctccgcctcgcatggcatgatgctggcacctatgatgtgaacacaagaactggtggtgca 180 Query: 222 aatggttcaattagatacgaggaagagtacacccatggttcaaatgctggcttaaaaatt 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aatggttcaattagatacgaggaagagtacacccatggttcaaatgctggcttaaaaatt 240 Query: 282 gctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagacctt 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagacctt 300 Query: 342 catcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatc 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 catcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatc 360 Query: 402 cctggaagacgtgattcgtcagtttgtccccgtgaaggacgccttcctgatgctaagaaa 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctggaagacgtgattcgtcagtttgtccccgtgaaggacgccttcctgatgctaagaaa 420 Query: 462 ggtgcaccacatctaagggacatcttttatcgaatggggttaacagacaaagatattgta 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ggtgcaccacatctaagggacatcttttatcgaatggggttaacagacaaagatattgta 480 Query: 522 gcactatctggggggcacagcctgggaaaggcgcatcctgaaaggtctgggtttgacgg 580 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gcactatctggggggcacagcctgggaaaggcgcatcctgaaaggtctgggtttgacgg 539
>ref|XM_483666.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1158 Score = 583 bits (294), Expect = e-163 Identities = 462/518 (89%) Strand = Plus / Plus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 107 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccac 166 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcat 179 ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 ctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcat 226 Query: 180 gatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatac 239 || || ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 227 gacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatac 286 Query: 240 gaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgag 299 |||||||||||||| || |||||||||||||| |||| |||||||||||||| || ||| Sbjct: 287 gaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgag 346 Query: 300 cctattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagta 359 ||||||||||| ||| || ||||| |||||||| |||||| |||||||||| ||||| Sbjct: 347 cctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagtt 406 Query: 360 gttgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattcg 419 |||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 407 gttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcg 466 Query: 420 tcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggtgcaccacatctaagg 479 |||||||| ||||||||||| || ||||||||||||||||||||||||| || | ||| Sbjct: 467 tcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagg 526 Query: 480 gacatcttttatcgaatggggttaacagacaaagatattgtagcactatctggggggcac 539 ||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| ||| Sbjct: 527 gacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcac 586 Query: 540 agcctgggaaaggcgcatcctgaaaggtctgggtttga 577 | ||||||| ||| ||||||||||||||||| ||||| Sbjct: 587 actctgggaagggcacatcctgaaaggtctggatttga 624
>ref|XM_507324.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1479_B11.9 mRNA Length = 1229 Score = 583 bits (294), Expect = e-163 Identities = 462/518 (89%) Strand = Plus / Plus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 118 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccac 177 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcat 179 ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 178 ctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcat 237 Query: 180 gatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatac 239 || || ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 238 gacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatac 297 Query: 240 gaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgag 299 |||||||||||||| || |||||||||||||| |||| |||||||||||||| || ||| Sbjct: 298 gaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgag 357 Query: 300 cctattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagta 359 ||||||||||| ||| || ||||| |||||||| |||||| |||||||||| ||||| Sbjct: 358 cctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagtt 417 Query: 360 gttgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattcg 419 |||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 418 gttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcg 477 Query: 420 tcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggtgcaccacatctaagg 479 |||||||| ||||||||||| || ||||||||||||||||||||||||| || | ||| Sbjct: 478 tcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagg 537 Query: 480 gacatcttttatcgaatggggttaacagacaaagatattgtagcactatctggggggcac 539 ||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| ||| Sbjct: 538 gacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcac 597 Query: 540 agcctgggaaaggcgcatcctgaaaggtctgggtttga 577 | ||||||| ||| ||||||||||||||||| ||||| Sbjct: 598 actctgggaagggcacatcctgaaaggtctggatttga 635
>dbj|AK104490.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B09, full insert sequence Length = 1158 Score = 575 bits (290), Expect = e-161 Identities = 461/518 (88%) Strand = Plus / Plus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 107 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccac 166 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcat 179 ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 167 ctccgcgccctcatcttctccaagggatgcgcgcccatcatgctccgcctcgcatggcat 226 Query: 180 gatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatac 239 || || ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 227 gacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatac 286 Query: 240 gaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgag 299 |||||||||||||| || |||||||||||||| |||| |||||||||||||| || ||| Sbjct: 287 gaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgag 346 Query: 300 cctattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagta 359 ||||||||||| ||| || ||||| |||||||| |||||| |||||||||| ||||| Sbjct: 347 cctattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagtt 406 Query: 360 gttgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattcg 419 |||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 407 gttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcg 466 Query: 420 tcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggtgcaccacatctaagg 479 |||||||| ||||||||||| || ||||||||||||||||||||||||| || | ||| Sbjct: 467 tcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagg 526 Query: 480 gacatcttttatcgaatggggttaacagacaaagatattgtagcactatctggggggcac 539 ||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| ||| Sbjct: 527 gacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcac 586 Query: 540 agcctgggaaaggcgcatcctgaaaggtctgggtttga 577 | ||||||| ||| ||||||||||||||||| ||||| Sbjct: 587 actctgggaagggcacatcctgaaaggtctggatttga 624
>dbj|AK070842.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074O14, full insert sequence Length = 1229 Score = 575 bits (290), Expect = e-161 Identities = 461/518 (88%) Strand = Plus / Plus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 118 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccac 177 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcat 179 ||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 178 ctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgcatggcat 237 Query: 180 gatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatac 239 || || ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 238 gacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaattagatac 297 Query: 240 gaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgag 299 |||||||||||||| || |||||||||||||| |||| |||||||||||||| || ||| Sbjct: 298 gaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatcttctcgag 357 Query: 300 cctattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagta 359 || |||||||| ||| || ||||| |||||||| |||||| |||||||||| ||||| Sbjct: 358 cccattaaagccaagagccctaagatcacatatgctgacctttatcagcttgctggagtt 417 Query: 360 gttgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattcg 419 |||||||||||||| || ||||||||||| ||||||||||| |||||||||||||||||| Sbjct: 418 gttgcagttgaagttactgggggtccaactgttgagttcattcctggaagacgtgattcg 477 Query: 420 tcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggtgcaccacatctaagg 479 |||||||| ||||||||||| || ||||||||||||||||||||||||| || | ||| Sbjct: 478 tcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggtgcactgcacttgagg 537 Query: 480 gacatcttttatcgaatggggttaacagacaaagatattgtagcactatctggggggcac 539 ||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| ||| Sbjct: 538 gacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggtcac 597 Query: 540 agcctgggaaaggcgcatcctgaaaggtctgggtttga 577 | ||||||| ||| ||||||||||||||||| ||||| Sbjct: 598 actctgggaagggcacatcctgaaaggtctggatttga 635
>gb|BT016732.1| Zea mays clone Contig565 mRNA sequence Length = 1248 Score = 521 bits (263), Expect = e-145 Identities = 452/515 (87%) Strand = Plus / Plus Query: 57 gcgatggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgc 116 |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||| Sbjct: 134 gcgatggcggctcccatggtcgacgccgaatacctgcgccaggtcgacagggcgcgccgc 193 Query: 117 gccctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatgg 176 |||||| ||||||||| || ||||||||||||||| ||||||||||||||||||||| Sbjct: 194 cacctccgcgccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatgg 253 Query: 177 catgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattaga 236 ||||||||||| || ||||| |||| |||| ||||||||||||||||||||| |||||| Sbjct: 254 catgatgctggaacttatgacctgaagacaaaaactggtggtgcaaatggttcgattaga 313 Query: 237 tacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctcctt 296 || || ||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 314 tatgaagaagagtacactcatggttcaaatgctggtttaaagattgctatcgatctcctt 373 Query: 297 gagcctattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccgga 356 |||||||| ||||| ||| |||||||||| |||||||||||||| |||||||||| ||| Sbjct: 374 gagcctatcaaagcaaagaatccaaagataacatatgcagacctgtatcagcttgctgga 433 Query: 357 gtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgat 416 || |||||||| ||||| || ||||| ||||| ||||| || || ||||| ||||||||| Sbjct: 434 gtggttgcagtcgaagtgactggggggccaactgttgaatttattcctggcagacgtgat 493 Query: 417 tcgtcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggtgcaccacatcta 476 ||||| || || ||||||||||| || || || |||||||||||||||||||||||||| Sbjct: 494 tcgtcggtgtgcccccgtgaagggcgtctgccagatgctaagaaaggtgcaccacatctg 553 Query: 477 agggacatcttttatcgaatggggttaacagacaaagatattgtagcactatctgggggg 536 ||||||||||||||||| ||||| ||| | ||||||||||||||||| ||||| ||||| Sbjct: 554 agggacatcttttatcggatgggcttatcggacaaagatattgtagctctatcaggggga 613 Query: 537 cacagcctgggaaaggcgcatcctgaaaggtctgg 571 || | ||||||| ||| || ||||| |||||||| Sbjct: 614 catactctgggaagggctcaccctgagaggtctgg 648
>gb|AY109419.1| Zea mays CL26634_1 mRNA sequence Length = 1373 Score = 363 bits (183), Expect = 4e-97 Identities = 376/446 (84%) Strand = Plus / Minus Query: 126 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcatgatgct 185 ||||||||| || ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1206 gccctcatctccaacaagggatgcgccccgatcatgctccgcctcgcatggcatgatgct 1147 Query: 186 ggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatacgaggaa 245 || || ||||| |||| || ||||||||||||||||||| |||||||| || ||| Sbjct: 1146 ggaacttatgacctgaagacnnnnnctggtggtgcaaatggttcgattagatatgaagaa 1087 Query: 246 gagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgagcctatt 305 |||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1086 gagtacactcatggttcaaatgctggtttaaagattgctatcgatctccttgagcctatc 1027 Query: 306 aaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgca 365 ||||| ||| |||||||||| |||||||||||||| |||||||||| ||||| |||||| Sbjct: 1026 aaagcaaagaatccaaagataacatatgcagacctgtatcagcttgctggagtggttgca 967 Query: 366 gttgaagtcaccgggggtccaaccgttgagttcatccctggaagacgtgattcgtcagtt 425 || ||||| || ||||| ||||| || || ||||| |||||||||||||| || Sbjct: 966 gtcgaagtgactnnnnnnccaactgttgaatttattcctggcagacgtgattcgtcggtg 907 Query: 426 tgtccccgtgaaggacgccttcctgatgctaagaaaggtgcaccacatctaagggacatc 485 || ||||||| || || || |||||||||||||||||||||||||| ||||||||| Sbjct: 906 tgnnnnngtgaagggcgtctgccagatgctaagaaaggtgcaccacatctgagggacatc 847 Query: 486 ttttatcgaatggggttaacagacaaagatattgtagcactatctggggggcacagcctg 545 |||||||| ||||| ||| | ||||||||||||||||| ||||| |||| || | ||| Sbjct: 846 ttttatcggatgggcttatcggacaaagatattgtagctctatcanggggacatactctg 787 Query: 546 ggaaaggcgcatcctgaaaggtctgg 571 |||| ||| || ||||| |||||||| Sbjct: 786 ggaagggctcaccctgagaggtctgg 761 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 57 gcgatggcggctccggtggtggacgccgagtacctgcgccaggtcgaca 105 |||||||||||||| |||| |||||||| ||||||||||||||||||| Sbjct: 1275 gcgatggcggctcccatggtcgacgccgaatacctgcgccaggtcgaca 1227
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 161 bits (81), Expect = 3e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| | Sbjct: 20903600 atggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgac 20903541 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 172 ||||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20903540 ctccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 20903488 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 173 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaat 232 |||||||||||||||||| ||||||| || |||| |||| | ||||||||||||||||| Sbjct: 20901812 atggcatgatgctggcacatatgatgcaaaaacaaaaactaggggtgcaaatggttcaat 20901753 Query: 233 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 292 ||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct: 20901752 taggcatgaggaagagtacactcatggttcaaatgctggactaaaaattgccattgatct 20901693 Query: 293 ccttg 297 ||||| Sbjct: 20901692 ccttg 20901688 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 461 aggtgcaccacatctaagggacatcttttatcgaatggggttaacagacaaagatattgt 520 ||||||||||||| |||| ||||||||||||| |||||| || || ||||| |||||||| Sbjct: 20899801 aggtgcaccacatttaagagacatcttttatcaaatgggattgactgacaaggatattgt 20899742 Query: 521 agc 523 ||| Sbjct: 20899741 agc 20899739 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 344 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttga 394 ||||||||| ||||| |||||||||||||| || || |||||||||||||| Sbjct: 20900418 tcagcttgctggagtggttgcagttgaagttactggaggtccaaccgttga 20900368 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 420 tcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggt 464 |||||||| || || |||||||| ||||||||||| ||||||||| Sbjct: 20900261 tcagtttgcccgcgagaaggacgtcttcctgatgcgaagaaaggt 20900217 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 545 gggaaaggcgcatcctgaaaggtctgggtttgacgg 580 ||||||||| ||||||||||| ||||| |||||||| Sbjct: 20899033 gggaaaggcacatcctgaaagatctggatttgacgg 20898998
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 161 bits (81), Expect = 3e-36 Identities = 105/113 (92%) Strand = Plus / Minus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||| | Sbjct: 95826 atggcggctccggtggtggacgcggagtacctgcgacaggtcgagggggcgcgccgcgac 95767 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 172 ||||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95766 ctccgcgcgctcatcgcctccaagggctgcgcccccatcatgctccgcctcgc 95714 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Minus Query: 173 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaat 232 |||||||||||||||||| ||||||| || |||| |||| | ||||||||||||||||| Sbjct: 94038 atggcatgatgctggcacatatgatgcaaaaacaaaaactaggggtgcaaatggttcaat 93979 Query: 233 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 292 ||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||| Sbjct: 93978 taggcatgaggaagagtacactcatggttcaaatgctggactaaaaattgccattgatct 93919 Query: 293 ccttg 297 ||||| Sbjct: 93918 ccttg 93914 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 461 aggtgcaccacatctaagggacatcttttatcgaatggggttaacagacaaagatattgt 520 ||||||||||||| |||| ||||||||||||| |||||| || || ||||| |||||||| Sbjct: 92027 aggtgcaccacatttaagagacatcttttatcaaatgggattgactgacaaggatattgt 91968 Query: 521 agc 523 ||| Sbjct: 91967 agc 91965 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 344 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttga 394 ||||||||| ||||| |||||||||||||| || || |||||||||||||| Sbjct: 92644 tcagcttgctggagtggttgcagttgaagttactggaggtccaaccgttga 92594 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Minus Query: 420 tcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggt 464 |||||||| || || |||||||| ||||||||||| ||||||||| Sbjct: 92487 tcagtttgcccgcgagaaggacgtcttcctgatgcgaagaaaggt 92443 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 545 gggaaaggcgcatcctgaaaggtctgggtttgacgg 580 ||||||||| ||||||||||| ||||| |||||||| Sbjct: 91259 gggaaaggcacatcctgaaagatctggatttgacgg 91224
>gb|AY459336.1| Oryza sativa (japonica cultivar-group) clone CL034244.2 R2R3-MYB gene region Length = 65993 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Minus Query: 173 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaat 232 ||||||||| || ||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 55926 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 55867 Query: 233 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 292 ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| Sbjct: 55866 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 55807 Score = 137 bits (69), Expect = 5e-29 Identities = 102/113 (90%) Strand = Plus / Minus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 56994 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccaa 56935 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 172 || || ||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 56934 cttcgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 56882 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 345 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 404 |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 55136 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 55077 Query: 405 ggaagacgtg 414 |||||||||| Sbjct: 55076 ggaagacgtg 55067 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 414 gattcgtcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggt 464 |||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 54987 gattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggt 54937 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 477 agggacatcttttatcgaatggggttaacagacaaagatattgtagcactatctgggggg 536 |||||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 54354 agggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggt 54295 Query: 537 caca 540 |||| Sbjct: 54294 caca 54291 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 545 gggaaaggcgcatcctgaaaggtctgggtttga 577 ||||| ||| ||||||||||||||||| ||||| Sbjct: 54195 gggaagggcacatcctgaaaggtctggatttga 54163
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Minus Query: 173 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaat 232 ||||||||| || ||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 27550886 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 27550827 Query: 233 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 292 ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| Sbjct: 27550826 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 27550767 Score = 153 bits (77), Expect = 8e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 27551954 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccac 27551895 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 172 ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 27551894 ctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 27551842 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 345 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 404 |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 27550096 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 27550037 Query: 405 ggaagacgtg 414 |||||||||| Sbjct: 27550036 ggaagacgtg 27550027 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 414 gattcgtcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggt 464 |||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 27549947 gattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggt 27549897 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 477 agggacatcttttatcgaatggggttaacagacaaagatattgtagcactatctgggggg 536 |||||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 27549313 agggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggt 27549254 Query: 537 caca 540 |||| Sbjct: 27549253 caca 27549250 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 545 gggaaaggcgcatcctgaaaggtctgggtttga 577 ||||| ||| ||||||||||||||||| ||||| Sbjct: 27549154 gggaagggcacatcctgaaaggtctggatttga 27549122
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 159 bits (80), Expect = 1e-35 Identities = 110/120 (91%) Strand = Plus / Minus Query: 173 atggcatgatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaat 232 ||||||||| || ||||| ||||| |||||||||| |||||||||||||||||||||||| Sbjct: 33176 atggcatgacgcgggcacttatgacgtgaacacaaaaactggtggtgcaaatggttcaat 33117 Query: 233 tagatacgaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatct 292 ||||||||||||||||||||| || |||||||||||||| |||| |||||||||||||| Sbjct: 33116 tagatacgaggaagagtacactcacggttcaaatgctggtctaaagattgctattgatct 33057 Score = 153 bits (77), Expect = 8e-34 Identities = 104/113 (92%) Strand = Plus / Minus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 ||||| || ||||| ||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 34244 atggccgccccggtcgtggacgccgagtacctccgccaggtcgacagggcgcgccgccac 34185 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgc 172 ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 34184 ctccgcgccctcatctcctccaagggatgcgcgcccatcatgctccgcctcgc 34132 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Minus Query: 345 cagcttgccggagtagttgcagttgaagtcaccgggggtccaaccgttgagttcatccct 404 |||||||| ||||| |||||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 32386 cagcttgctggagttgttgcagttgaagttactgggggtccaactgttgagttcattcct 32327 Query: 405 ggaagacgtg 414 |||||||||| Sbjct: 32326 ggaagacgtg 32317 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 414 gattcgtcagtttgtccccgtgaaggacgccttcctgatgctaagaaaggt 464 |||||||||||||| ||||||||||| || ||||||||||||||||||||| Sbjct: 32237 gattcgtcagtttgcccccgtgaagggcgtcttcctgatgctaagaaaggt 32187 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Minus Query: 477 agggacatcttttatcgaatggggttaacagacaaagatattgtagcactatctgggggg 536 |||||||||||||| || ||||| ||| ||||||||||||| ||||| |||||||||| Sbjct: 31603 agggacatcttttaccggatgggcttatcagacaaagatatagtagctttatctgggggt 31544 Query: 537 caca 540 |||| Sbjct: 31543 caca 31540 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 545 gggaaaggcgcatcctgaaaggtctgggtttga 577 ||||| ||| ||||||||||||||||| ||||| Sbjct: 31444 gggaagggcacatcctgaaaggtctggatttga 31412
>gb|AF159254.1|AF159254 Zantedeschia aethiopica ascorbate peroxidase (cmApx) mRNA, complete cds Length = 1167 Score = 141 bits (71), Expect = 3e-30 Identities = 251/311 (80%) Strand = Plus / Plus Query: 60 atggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgcc 119 |||||||| |||||||||||||| | ||||| ||||||||| ||||||| | | | Sbjct: 52 atggcggcaccggtggtggacgcgggctacctcaaggaggtcgacaaggcgcgcagggac 111 Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggcat 179 ||||| |||||||||||| |||| ||||| ||| ||||||||||||| ||||||||| Sbjct: 112 ctccgcgccctcatcgccagcaagaactgcgctcccgtcatgctccgcctagcatggcat 171 Query: 180 gatgctggcacctatgatgtgaacacaagaactggtggtgcaaatggttcaattagatac 239 ||||||||||| ||||||||||| |||| || |||||| ||||||||||||| ||| | Sbjct: 172 gatgctggcacttatgatgtgaaaacaaagacaggtggtccaaatggttcaatcagaaat 231 Query: 240 gaggaagagtacacccatggttcaaatgctggcttaaaaattgctattgatctccttgag 299 ||||||||| ||| ||||| |||||||||| ||||| || || || ||||| ||| Sbjct: 232 gaggaagagcacaaacatggcgcaaatgctgggttaaagatagccatagatctttgtgaa 291 Query: 300 cctattaaagcgaagcatccaaagattacatatgcagaccttcatcagcttgccggagta 359 | | || || || ||||||| ||| |||||||| |||||| | |||||||| ||||| Sbjct: 292 acggtgaaggcaaaacatccaaggataacatatgctgacctttaccagcttgctggagtt 351 Query: 360 gttgcagttga 370 || |||||||| Sbjct: 352 gtcgcagttga 362
>dbj|AK108458.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-D05, full insert sequence Length = 755 Score = 111 bits (56), Expect = 3e-21 Identities = 128/152 (84%) Strand = Plus / Plus Query: 312 aagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaa 371 ||||||||||| || || ||||| || ||| |||||||||| ||||| |||||||||||| Sbjct: 79 aagcatccaaatatcacttatgctgatctttatcagcttgctggagtggttgcagttgaa 138 Query: 372 gtcaccgggggtccaaccgttgagttcatccctggaagacgtgattcgtcagtttgtccc 431 || || || |||||||||||||| || | ||||||||| | || || |||||||| || Sbjct: 139 gttactggaggtccaaccgttgactttgttcctggaagaagggactcatcagtttgcccg 198 Query: 432 cgtgaaggacgccttcctgatgctaagaaagg 463 || |||||||| ||||||||||| |||||||| Sbjct: 199 cgagaaggacgtcttcctgatgcgaagaaagg 230 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Plus Query: 545 gggaaaggcgcatcctgaaaggtctgggtttgacgg 580 ||||||||| ||||||||||| ||||| |||||||| Sbjct: 229 gggaaaggcacatcctgaaagatctggatttgacgg 264
>gb|U37060.1|GHU37060 Gossypium hirsutum ascorbate peroxidase mRNA, complete cds Length = 1239 Score = 103 bits (52), Expect = 6e-19 Identities = 199/248 (80%) Strand = Plus / Plus Query: 315 catccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtc 374 ||||| || ||||| ||||||||||| | |||||||| || || ||||| ||||||||| Sbjct: 349 catcctaaaattacgtatgcagacctataccagcttgctggtgttgttgctgttgaagtc 408 Query: 375 accgggggtccaaccgttgagttcatccctggaagacgtgattcgtcagtttgtccccgt 434 || || ||||| ||| |||| || | ||||||||| ||||| |||| ||| | Sbjct: 409 actggaggtcctaccattgactttgtacctggaagaaaggattcaaacatttgccccagg 468 Query: 435 gaaggacgccttcctgatgctaagaaaggtgcaccacatctaagggacatcttttatcga 494 ||||| || ||||| |||||||| | ||||||||| ||||| ||||||||||| |||||| Sbjct: 469 gaaggccgacttccagatgctaaaagaggtgcacctcatctgagggacatcttctatcga 528 Query: 495 atggggttaacagacaaagatattgtagcactatctggggggcacagcctgggaaaggcg 554 ||||| | | |||||||||||||| ||| |||||||||| |||| ||||||| ||| Sbjct: 529 atgggtctttctgacaaagatattgtggcattatctgggggtcacactctgggaagggct 588 Query: 555 catcctga 562 |||||||| Sbjct: 589 catcctga 596
>ref|XM_474945.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 876 Score = 91.7 bits (46), Expect = 2e-15 Identities = 94/110 (85%) Strand = Plus / Plus Query: 279 attgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagac 338 |||||||||||||| || || || || ||| ||||||||| |||||||| ||||| ||| Sbjct: 223 attgctattgatctgctagaaccgatgaaacagaagcatcccaagattacctatgctgac 282 Query: 339 cttcatcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 388 || |||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 283 ctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 332 Score = 81.8 bits (41), Expect = 2e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 62 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 121 |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 6 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 65 Query: 122 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 || |||||||||||| |||| | ||||| ||||||||||||||||| || ||||| Sbjct: 66 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggca 122
>gb|AY382617.1| Oryza sativa (indica cultivar-group) putative peroxisome-bound ascorbate peroxidase (APx3) mRNA, complete cds Length = 1060 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/117 (84%) Strand = Plus / Plus Query: 62 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 121 |||||| |||||||||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 45 ggcggcgccggtggtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 104 Query: 122 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 || |||||||||||| |||| | ||||| ||||||||||||||||| || ||||| Sbjct: 105 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcctggcgtggca 161 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 279 attgctattgatctccttgagcctattaaagcgaagcatccaaagattacatatgcagac 338 |||||||||||||| || || || || ||| || |||||| |||||||| ||||| ||| Sbjct: 262 attgctattgatctgctagaaccgatgaaacagaggcatcccaagattacctatgctgac 321 Query: 339 cttcatcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 388 || |||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 322 ctgtatcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 371
>emb|AL606634.2|OSJN00066 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0072N21, complete sequence Length = 130433 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 62 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 121 |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 11191 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 11132 Query: 122 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcct 169 || |||||||||||| |||| | ||||| ||||||||||||||||| Sbjct: 11131 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcct 11084 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 344 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 388 ||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 10318 tcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 10274
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 9e-12 Identities = 91/108 (84%) Strand = Plus / Minus Query: 62 ggcggctccggtggtggacgccgagtacctgcgccaggtcgacagggcgcgccgcgccct 121 |||||| ||||| |||||||| |||||| || ||||||| ||||||||||||| ||| Sbjct: 8200678 ggcggcgccggtagtggacgcggagtacatggcggaggtcgagagggcgcgccgcgacct 8200619 Query: 122 ccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcct 169 || |||||||||||| |||| | ||||| ||||||||||||||||| Sbjct: 8200618 gcgcgccctcatcgccagcaagagctgcgctcccatcatgctccgcct 8200571 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 344 tcagcttgccggagtagttgcagttgaagtcaccgggggtccaac 388 ||||||||||||||| ||||| |||||||||||||| || ||||| Sbjct: 8199805 tcagcttgccggagttgttgccgttgaagtcaccggtgggccaac 8199761
>gb|DQ078123.1| Rheum australe ascorbate peroxidase mRNA, complete cds Length = 1192 Score = 77.8 bits (39), Expect = 4e-11 Identities = 96/115 (83%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 206 |||||||||||||||||||||||||| ||||| ||||| || || ||||||| ||| || Sbjct: 91 tgcgcccccatcatgctccgcctcgcgtggcacgatgccgggacatatgatgcgaagacg 150 Query: 207 agaactggtggtgcaaatggttcaattagatacgaggaagagtacacccatggtt 261 | ||||| || |||||||||| ||||| |||| ||||||| || |||||||| Sbjct: 151 aagactggaggaccaaatggttccattaggaacgacgaagagttcagccatggtt 205 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Plus Query: 310 cgaagcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttg 369 |||| |||| |||||| |||||||||||||| | |||||||| || || || ||||||| Sbjct: 254 cgaaacatcaaaagatcacatatgcagacctctaccagcttgctggtgttgtcgcagttg 313 Query: 370 aagtcaccgggggtccaaccgttga 394 ||||||| || || |||||| |||| Sbjct: 314 aagtcactggaggaccaaccattga 338
>gb|AF139190.1|AF139190 Mesembryanthemum crystallinum cytosolic ascorbate peroxidase mRNA, complete cds Length = 1238 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 316 atccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtca 375 |||||||||| |||||||| ||||| |||||||||| || || |||||||||||||||| Sbjct: 370 atccaaagatcacatatgctgacctatatcagcttgctggtgttgttgcagttgaagtca 429 Query: 376 c 376 | Sbjct: 430 c 430 Score = 50.1 bits (25), Expect = 0.008 Identities = 85/105 (80%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 206 ||||| || ||||||||||||||||| ||||| || ||||| || ||| || ||| || Sbjct: 201 tgcgctcctatcatgctccgcctcgcgtggcacgacgctgggacgtattgtgcgaagacg 260 Query: 207 agaactggtggtgcaaatggttcaattagatacgaggaagagtac 251 | ||| ||||| || ||||| || ||||| |||||||||||||| Sbjct: 261 aaaaccggtggcgctaatggctccattaggaacgaggaagagtac 305
>dbj|AB070626.1| Cucurbita sp. cv. Kurokawa Amakuri pAPX mRNA for peroxisomal ascorbate peroxidase, complete cds Length = 1133 Score = 60.0 bits (30), Expect = 8e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 435 gaaggacgccttcctgatgctaagaaaggtgcaccacatctaagggacatcttttatcga 494 ||||| || ||||||||||| || ||||||||||||||||| | ||||| |||||| || Sbjct: 451 gaaggccgacttcctgatgcaaaaaaaggtgcaccacatctgcgtgacattttttataga 510 Query: 495 atggggttaacagacaaagatattgtagcactatctggggggcaca 540 ||||| | | ||||| |||||||| ||| | |||||||| |||| Sbjct: 511 atgggcctgtctgacaaggatattgttgcattgtctgggggtcaca 556
>gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete sequence Length = 116205 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 483 atcttttatcgaatggggttaacagacaaagatattgtagcactatctgggg 534 ||||||||||| ||||| || || |||||||||||||| ||||| ||||||| Sbjct: 95893 atcttttatcgtatgggcttgactgacaaagatattgttgcactgtctgggg 95944
>gb|DQ124021.1| Coffea arabica clone MN-SSH3-B11 mRNA sequence Length = 221 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 314 gcatccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagt 373 ||||||||||||||| ||||| |||||| | |||||||| || || ||||| |||||||| Sbjct: 67 gcatccaaagattacttatgcggacctttaccagcttgcaggtgttgttgctgttgaagt 126
>gb|AY466858.1| Vigna unguiculata peroxisomal ascorbate peroxidase mRNA, complete cds Length = 1169 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 315 catccaaagattacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtc 374 ||||| |||||||| |||||||| ||| | |||||||| || || ||||||||||| || Sbjct: 389 catcctaagattacgtatgcagatctttaccagcttgctggtgttgttgcagttgaggtt 448 Query: 375 accgggggtcc 385 || |||||||| Sbjct: 449 acggggggtcc 459
>ref|NM_119763.2| Arabidopsis thaliana L-ascorbate peroxidase/ peroxidase AT4G35970 mRNA, complete cds Length = 973 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 153 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 181
>gb|AF441714.1| Arabidopsis thaliana putative ascorbate peroxidase APX5 (AT4g35970) mRNA, partial cds Length = 784 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 153 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 38 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 83
>gb|AF039953.1|AF039953 Fragaria x ananassa cytosolic ascorbate peroxidase (ApxSC) mRNA, complete cds Length = 1040 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 175 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 220
>gb|AF159633.1|AF159633 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX26 allele, complete cds Length = 1035 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 208
>gb|AF159632.1|AF159632 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX22 allele, complete cds Length = 1065 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb|AF159631.1|AF159631 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX19 allele, complete cds Length = 1051 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 163 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 208
>gb|AF159630.1|AF159630 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX42 allele, complete cds Length = 1035 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb|AF159629.1|AF159629 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX27 allele, complete cds Length = 1030 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 171 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 216
>gb|AF159628.1|AF159628 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX44 allele, complete cds Length = 1040 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 176 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 221
>gb|AF159627.1|AF159627 Fragaria x ananassa cytosolic ascorbate peroxidase (APX) mRNA, APX18 allele, complete cds Length = 1012 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 148 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 193
>gb|BT006053.1| Arabidopsis thaliana clone U51359 putative ascorbate peroxidase (At4g35970) mRNA, complete cds Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 153 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 91 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 136
>gb|AF022213.1|AF022213 Fragaria x ananassa cytosolic ascorbate peroxidase (APX-c) mRNA, complete cds Length = 1044 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaa 202 |||||||||| ||||||||||| |||||| |||||||||||||| Sbjct: 167 tcatgctccgtctcgcatggcactctgctggaacctatgatgtgaa 212
>dbj|AK119023.1| Arabidopsis thaliana At4g35970 mRNA for putative ascorbate peroxidase, complete cds, clone: RAFL21-34-M19 Length = 973 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 153 cccatcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct: 136 cccattatgctccgtcttgcatggcatgatgcaggaacctatgatg 181
>dbj|D49679.1| Spinach mRNA for ascorbate peroxidase, complete cds Length = 1132 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 324 attacatatgcagaccttcatcagcttgccggagtagttgcagttgaagtcaccgggggt 383 ||||||||||| |||||| ||||||| || ||| | |||||||| ||||| ||||| ||| Sbjct: 288 attacatatgctgacctttatcagctagctggaattgttgcagtagaagtaaccggaggt 347 Query: 384 cc 385 || Sbjct: 348 cc 349
>emb|Z34934.1|ZMAPXG Z.mays apx gene encoding cytosolic ascorbate peroxidase Length = 1042 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggca 178 |||||||| |||||||||||||||||||||| Sbjct: 165 tgcgccccgctcatgctccgcctcgcatggca 196
>emb|AJ843990.1| Plantago major mRNA for ascorbate peroxidase (apx1 gene) Length = 1100 Score = 48.1 bits (24), Expect = 0.032 Identities = 93/116 (80%) Strand = Plus / Plus Query: 450 gatgctaagaaaggtgcaccacatctaagggacatcttttatcgaatggggttaacagac 509 ||||||||||||||||| || ||||| | ||| | || || |||||||| ||| | || Sbjct: 457 gatgctaagaaaggtgccccgcatctcaaggatgtgttctaccgaatgggattatctgat 516 Query: 510 aaagatattgtagcactatctggggggcacagcctgggaaaggcgcatcctgaaag 565 ||||||||||| || || || || || || | |||||||| |||||||||||||| Sbjct: 517 aaagatattgttgccctgtcgggtggccataccctgggaagagcgcatcctgaaag 572 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 159 atgctccgcctcgcatggcatgatgctggcacctatgatgtga 201 |||||||| ||||| |||||||||||||| || ||||| |||| Sbjct: 166 atgctccgtctcgcctggcatgatgctggaacgtatgacgtga 208
>gb|AY104492.1| Zea mays PCO104002 mRNA sequence Length = 1052 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggca 178 |||||||| |||||||||||||||||||||| Sbjct: 179 tgcgccccgctcatgctccgcctcgcatggca 210
>ref|NM_119666.2| Arabidopsis thaliana APX3 (ASCORBATE PEROXIDASE 3); L-ascorbate peroxidase AT4G35000 (APX3) mRNA, complete cds Length = 1213 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 261 atcatgctccgattggcatggcacgatgctggaacctatgatg 303
>gb|BT016458.1| Zea mays clone Contig291 mRNA sequence Length = 1269 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 120 ctccgtgccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 ||||| |||||||||||| ||| | ||||| ||| |||||||||||||||| ||||| Sbjct: 158 ctccgcgccctcatcgccgagaagagctgcgcgcccctcatgctccgcctcgcgtggca 216
>gb|AF442387.1| Capsicum annuum ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 315 catccaaagattacatatgcaga 337 ||||||||||||||||||||||| Sbjct: 279 catccaaagattacatatgcaga 301
>emb|X98276.1|ATAPEXT A.thaliana mRNA for ascorbate peroxidase, extraplastidal (membrane bound) (APX3) Length = 1045 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 103 atcatgctccgattggcatggcacgatgctggaacctatgatg 145
>emb|X98003.1|ATAPX A.thaliana mRNA for ascorbate peroxidase Length = 1127 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 167 atcatgctccgattggcatggcacgatgctggaacctatgatg 209
>gb|AY081646.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g35000) mRNA, complete cds Length = 1030 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 97 atcatgctccgattggcatggcacgatgctggaacctatgatg 139
>gb|AY065143.1| Arabidopsis thaliana L-ascorbate peroxidase (At4g35000; M4E13.60) mRNA, complete cds Length = 1121 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 185 atcatgctccgattggcatggcacgatgctggaacctatgatg 227
>emb|BX828485.1|CNS0A4AX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH94ZG04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2260 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 159 atcatgctccgattggcatggcacgatgctggaacctatgatg 201
>gb|AY086162.1| Arabidopsis thaliana clone 21896 mRNA, complete sequence Length = 1160 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 211 atcatgctccgattggcatggcacgatgctggaacctatgatg 253
>gb|U69138.1|ATU69138 Arabidopsis thaliana ascorbate peroxidase 3 (APX3) mRNA, complete cds Length = 1177 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 156 atcatgctccgcctcgcatggcatgatgctggcacctatgatg 198 ||||||||||| | |||||||| |||||||| |||||||||| Sbjct: 223 atcatgctccgattggcatggcacgatgctggaacctatgatg 265
>ref|XM_479627.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>ref|XM_506596.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E10.12 mRNA Length = 1392 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>gb|AC073363.10| Homo sapiens 3 BAC RP11-293N1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 184092 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 456 aagaaaggtgcaccacatctaa 477 |||||||||||||||||||||| Sbjct: 19018 aagaaaggtgcaccacatctaa 19039
>emb|X78452.1|RSAPX R.sativus (Fakir) APX mRNA for L-ascorbate peroxidase Length = 753 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 153 cccatcatgctccgcctcgcatggca 178 ||||||||| |||||||||||||||| Sbjct: 100 cccatcatggtccgcctcgcatggca 125
>dbj|AB053297.1| Oryza sativa (japonica cultivar-group) APXb mRNA for L-ascorbate peroxidase, complete cds Length = 1160 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 160 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 205
>dbj|AK122175.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148L03, full insert sequence Length = 2982 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 170 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 215
>dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033106K23, full insert sequence Length = 2215 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj|AK068430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156P11, full insert sequence Length = 1393 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 169 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 214
>dbj|AK061715.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H06, full insert sequence Length = 1110 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 173 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 218
>dbj|AB077953.1| Euglena gracilis apx mRNA for ascorbate peroxidase, partial cds Length = 1326 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 141 aagggatgcgcccccatcatgctccgcctcgcatggcatgatgctggcac 190 ||||| |||||||||||| || ||||||| || ||||| || |||||||| Sbjct: 151 aagggctgcgcccccatcctgatccgcctggcgtggcacgacgctggcac 200
>dbj|AB050724.1| Oryza sativa (japonica cultivar-group) APXb mRNA for ascorbate peroxidase, complete cds Length = 1058 Score = 44.1 bits (22), Expect = 0.50 Identities = 40/46 (86%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacct 192 |||||||| |||||||||||||||| ||||| ||||||||||| Sbjct: 155 tgcgccccactcatgctccgcctcgcgtggcactctgctggcacct 200
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 tctcttctagggtcgtccgcgatggcggc 67 |||||||| |||||| ||||||||||||| Sbjct: 165685 tctcttctggggtcgaccgcgatggcggc 165713
>gb|AC113121.27| Mus musculus chromosome 8, clone RP23-347G12, complete sequence Length = 192877 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 466 caccacatctaagggacatct 486 ||||||||||||||||||||| Sbjct: 64181 caccacatctaagggacatct 64201
>ref|XM_470658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 753 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 126 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 73 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 125
>gb|AY254495.1| Oryza sativa (indica cultivar-group) ascorbate peroxidase mRNA, complete cds Length = 806 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 126 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 86 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 138
>emb|BX548028.5| Zebrafish DNA sequence from clone CH211-260H24 in linkage group 12, complete sequence Length = 157392 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 498 gggttaacagacaaagatatt 518 ||||||||||||||||||||| Sbjct: 276 gggttaacagacaaagatatt 296
>dbj|AB125635.1| Brassica oleracea BO-sAPX mRNA for stromal ascorbate peroxidase, complete cds Length = 1430 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 173 atggcatgatgctggcaccta 193 ||||||||||||||||||||| Sbjct: 424 atggcatgatgctggcaccta 444
>dbj|AK061841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-E04, full insert sequence Length = 1070 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 126 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 138 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 190
>dbj|D45423.1| Rice mRNA for ascorbate peroxidase, complete cds Length = 983 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 126 gccctcatcgcctccaagggatgcgcccccatcatgctccgcctcgcatggca 178 |||||||||||| ||| | |||||||| |||||||||||||||| ||||| Sbjct: 112 gccctcatcgccgagaagagctgcgcccctctcatgctccgcctcgcgtggca 164
>gb|AY789051.1| Populus tomentosa ascorbate peroxidase mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 7.9 Identities = 110/140 (78%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggcatgatgctggcacctatgatgtgaacaca 206 ||||| || |||||||||||| | || ||||||||||| || || ||||| |||||| Sbjct: 104 tgcgctcctatcatgctccgcttagcgtggcatgatgcaggaacgtatgacaagaacacg 163 Query: 207 agaactggtggtgcaaatggttcaattagatacgaggaagagtacacccatggttcaaat 266 | ||| || ||||| |||||||| || || |||| || |||| | | |||||||| ||| Sbjct: 164 aaaacaggaggtgctaatggttcgataaggaacgaagaggagtgctctcatggttccaat 223 Query: 267 gctggcttaaaaattgctat 286 |||||| ||||| ||||| Sbjct: 224 aatggcttgaaaatcgctat 243
>ref|XM_519751.1| PREDICTED: Pan troglodytes LOC464166 (LOC464166), mRNA Length = 2721 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 1883 gagtacacccatggttcaaa 1864
>gb|AC096551.1| Homo sapiens BAC clone RP11-22K23 from 7, complete sequence Length = 149656 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 atcctgaaaggtctgggttt 575 |||||||||||||||||||| Sbjct: 20539 atcctgaaaggtctgggttt 20558
>gb|AC103686.4| Homo sapiens chromosome 8, clone CTD-2655I2, complete sequence Length = 176584 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 173409 gagtacacccatggttcaaa 173428
>emb|AL121823.12|HSBB212L9 Human DNA sequence from clone RP13-212L9 on chromosome X Contains a novel gene, complete sequence Length = 185156 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 aattgctattgatctccttg 297 |||||||||||||||||||| Sbjct: 63803 aattgctattgatctccttg 63822
>emb|AL049699.8|HSJ747H23 Human DNA sequence from clone RP4-747H23 on chromosome 6q13-15 Contains the 3' end of the ME1 gene for malic enzyme 1 (NADP(+)-dependent, cytosolic), a novel gene, the 5' end of the AGM1 gene for N-acetylglucosamine-phosphate mutase and two CpG islands, complete sequence Length = 114201 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tggcttaaaaattgctattg 288 |||||||||||||||||||| Sbjct: 64862 tggcttaaaaattgctattg 64881
>gb|AY316117.1| Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC) gene, complete cds Length = 187059 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 30473 gagtacacccatggttcaaa 30454
>emb|AJ893291.1| Uncultured ectomycorrhiza (Amphinema) partial 28S rRNA gene and ITS2, isolate L488B_A3 Length = 398 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 423 gtttgtccccgtgaaggacg 442 |||||||||||||||||||| Sbjct: 173 gtttgtccccgtgaaggacg 154
>emb|X60063.1|GDJUNDG G.domesticus junD gene Length = 2988 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 8 cgaggcctcgctccccgccc 27 |||||||||||||||||||| Sbjct: 537 cgaggcctcgctccccgccc 556
>ref|NM_006904.6| Homo sapiens protein kinase, DNA-activated, catalytic polypeptide (PRKDC), mRNA Length = 13509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 2000 gagtacacccatggttcaaa 1981
>dbj|AB254809.1| Cryptomeria japonica mRNA for putative ascorbate peroxidase, complete cds Length = 1012 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 168 ctcgcatggcatgatgctggcacctatgatgt 199 ||||||||||||| |||||| || |||||||| Sbjct: 155 ctcgcatggcatgctgctgggacttatgatgt 186
>gb|AC016821.9| Homo sapiens chromosome 10 clone RP11-404C6, complete sequence Length = 194243 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 agatattgtagcactatctg 531 |||||||||||||||||||| Sbjct: 20131 agatattgtagcactatctg 20150
>gb|AC021236.10| Homo sapiens chromosome 8, clone RP11-113H14, complete sequence Length = 162259 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 135416 gagtacacccatggttcaaa 135397
>gb|U63630.4|HSU63630 Homo sapiens MCM4 (MCM4) and DNA-PKcs (PRKDC) genes, partial cds Length = 93443 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 43767 gagtacacccatggttcaaa 43748
>ref|XM_940235.1| PREDICTED: Homo sapiens similar to protein kinase, DNA-activated, catalytic polypeptide (LOC651106), mRNA Length = 11850 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 1502 gagtacacccatggttcaaa 1483
>gb|AF411228.1|AF411228 Hordeum vulgare ascorbate peroxidase mRNA, complete cds Length = 1138 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 147 tgcgcccccatcatgctccgcctcgcatggca 178 ||||| ||| |||||||||||||||| ||||| Sbjct: 174 tgcgcgcccctcatgctccgcctcgcgtggca 205
>gb|U47077.5|HSU47077 Homo sapiens DNA-dependent protein kinase catalytic subunit (DNA-PKcs) mRNA, complete cds Length = 13509 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 2000 gagtacacccatggttcaaa 1981
>gb|U34994.3|HSU34994 Homo sapiens DNA dependent protein kinase catalytic subunit (PRKDC) mRNA, complete cds; alternatively spliced Length = 12783 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 gagtacacccatggttcaaa 265 |||||||||||||||||||| Sbjct: 1995 gagtacacccatggttcaaa 1976
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 527 atctggggggcacagcctgggaaa 550 ||||||||| |||||||||||||| Sbjct: 3153360 atctgggggtcacagcctgggaaa 3153383
>emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in linkage group 20, complete sequence Length = 116609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 ttaaaaattgctattgatct 292 |||||||||||||||||||| Sbjct: 82726 ttaaaaattgctattgatct 82707
>gb|AF079512.1|AF079512 Mesembryanthemum crystallinum clone R6-R11 ascorbate peroxidase mRNA, complete cds Length = 1022 Score = 40.1 bits (20), Expect = 7.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 157 tcatgctccgcctcgcatggcatgatgctggcacctatga 196 ||||||| |||||| ||| ||||||||||| |||||||| Sbjct: 146 tcatgcttcgcctctcattccatgatgctggtacctatga 185
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 gttgcagttgaagtcaccgg 379 |||||||||||||||||||| Sbjct: 2557852 gttgcagttgaagtcaccgg 2557833 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,457,646 Number of Sequences: 3902068 Number of extensions: 4457646 Number of successful extensions: 77481 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77169 Number of HSP's gapped (non-prelim): 305 length of query: 580 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 557 effective length of database: 17,143,297,704 effective search space: 9548816821128 effective search space used: 9548816821128 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
