Clone Information

BLAST Search Result

Clone Name	basd14p19
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel al...	35	0.14
2	RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6....	35	0.14
3	STIM2_HUMAN (Q9P246) Stromal interaction molecule 2 precursor	34	0.24
4	FMR2_ANTEL (Q16994) Antho-RFamide neuropeptides type 2 precursor...	34	0.24
5	SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (S...	34	0.31
6	FMR1_ANTEL (P10419) Antho-RFamide neuropeptides type 1 precursor...	34	0.31
7	WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC...	34	0.31
8	BEGIN_RAT (O88881) Brain-enriched guanylate kinase-associated pr...	33	0.41
9	CWC26_CRYNE (Q5KM20) Pre-mRNA-splicing factor CWC26	33	0.41
10	PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)	33	0.54
11	IF2_ANAMM (Q5PAJ5) Translation initiation factor IF-2	33	0.54
12	SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)	33	0.70
13	CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel al...	33	0.70
14	ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P...	33	0.70
15	ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P...	33	0.70
16	NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-...	32	0.92
17	IF2_SILPO (Q5LWL4) Translation initiation factor IF-2	32	0.92
18	RL28_MOUSE (P41105) 60S ribosomal protein L28	32	0.92
19	RL28_HUMAN (P46779) 60S ribosomal protein L28	32	0.92
20	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	32	0.92
21	CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22	28	0.98
22	TSSC4_MOUSE (Q9JHE7) Protein TSSC4	32	1.2
23	DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC...	32	1.2
24	DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (...	32	1.2
25	DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (...	32	1.2
26	DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (...	32	1.2
27	MECP2_MACFA (Q95LG8) Methyl-CpG-binding protein 2 (MeCP-2 protei...	32	1.2
28	MECP2_HUMAN (P51608) Methyl-CpG-binding protein 2 (MeCP-2 protei...	32	1.2
29	CAR10_MOUSE (P58660) Caspase recruitment domain-containing prote...	32	1.2
30	PP16A_MOUSE (Q923M0) Protein phosphatase 1 regulatory subunit 16...	32	1.6
31	DXR_PROMM (Q7V6J8) 1-deoxy-D-xylulose 5-phosphate reductoisomera...	32	1.6
32	IF2_DESDG (Q30WJ0) Translation initiation factor IF-2	31	2.0
33	U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 aux...	31	2.0
34	TSSC4_RAT (Q5XIB1) Protein TSSC4	31	2.0
35	NANR_SHIFL (P0A8W1) Transcriptional regulator nanR	31	2.0
36	NANR_ECOLI (P0A8W0) Transcriptional regulator nanR	31	2.0
37	NANR_ECOL6 (Q8FD57) Transcriptional regulator nanR	31	2.0
38	NANR_ECO57 (Q8X4W4) Transcriptional regulator nanR	31	2.0
39	UVRC_WOLSU (Q7M8K0) UvrABC system protein C (Protein uvrC) (Exci...	31	2.0
40	PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pkn...	31	2.0
41	PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pkn...	31	2.0
42	YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon ...	31	2.0
43	BEGIN_MOUSE (Q68EF6) Brain-enriched guanylate kinase-associated ...	31	2.0
44	PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)	31	2.7
45	Y748_CAUCR (Q9AA58) UPF0209 protein CC0748	31	2.7
46	RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)	31	2.7
47	RL28_RAT (P17702) 60S ribosomal protein L28	31	2.7
48	KIF1C_RAT (O35787) Kinesin-like protein KIF1C (Kinesin-like prot...	31	2.7
49	RHSB_ECOLI (P16917) Protein rhsB precursor	30	3.5
50	RHSA_ECOLI (P16916) Protein rhsA precursor	30	3.5
51	VE2_HPV15 (P36784) Regulatory protein E2	30	3.5
52	KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C	30	3.5
53	M1200_ARATH (P92550) Hypothetical mitochondrial protein AtMg0120...	30	4.5
54	CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6)	30	4.5
55	RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2	30	4.5
56	FBXL6_MOUSE (Q9QXW0) F-box/LRR-repeat protein 6 (F-box and leuci...	30	4.5
57	CAR10_HUMAN (Q9BWT7) Caspase recruitment domain-containing prote...	30	4.5
58	MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle II...	30	4.5
59	CH10_PROMM (Q7TUS3) 10 kDa chaperonin (Protein Cpn10) (groES pro...	30	5.9
60	IF2_LEIXX (Q6AG49) Translation initiation factor IF-2	30	5.9
61	TCP10_HUMAN (Q12799) T-complex protein 10A homolog	30	5.9
62	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	30	5.9
63	MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, m...	30	5.9
64	LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (C...	30	5.9
65	YNP1_CAEEL (P34554) Hypothetical protein T05G5.1 precursor	30	5.9
66	CH10_SYNP7 (P22880) 10 kDa chaperonin (Protein Cpn10) (groES pro...	29	7.8
67	CH10_SYNP6 (P07889) 10 kDa chaperonin (Protein Cpn10) (groES pro...	29	7.8
68	CH10_MYCLE (P24301) 10 kDa chaperonin (Protein Cpn10) (groES pro...	29	7.8
69	CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel ...	29	7.8
70	INVO_TARBA (P24711) Involucrin	29	7.8
71	ADA2A_HUMAN (P08913) Alpha-2A adrenergic receptor (Alpha-2A adre...	29	7.8
72	YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'regio...	29	7.8
73	IF2_STRAG (P0A3K7) Translation initiation factor IF-2	29	7.8
74	IF2_STRA5 (Q8E1H3) Translation initiation factor IF-2	29	7.8
75	IF2_STRA3 (P0A3K6) Translation initiation factor IF-2	29	7.8
76	IF2_STRA1 (Q3K302) Translation initiation factor IF-2	29	7.8
77	ZN213_HUMAN (O14771) Zinc finger protein 213 (Putative transcrip...	29	7.8
78	YAV1_XANCV (P14727) Hypothetical 122 kDa avirulence protein in a...	29	7.8
79	PODJ_CAUCR (Q9ZG88) Localization factor podJL (Polar organelle d...	29	7.8
80	KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C	29	7.8
81	PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)	29	7.8
82	CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25	29	7.8
83	VNUA_PRVKA (P33485) Probable nuclear antigen	29	7.8
84	IF2_DESVH (Q72ER1) Translation initiation factor IF-2	29	7.8

>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 35/123 (28%), Positives = 49/123 (39%)
 Frame = +2

Query: 11   QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRR 190
            + GR   R P  G  R  A  AP G+ PP  +   H D+ +    G   R +        
Sbjct: 820  ELGRDGARGPVGGKARPEAAEAPEGVDPP-RRHHRHRDKDKTPAAGDQDRAEAP------ 872

Query: 191  RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 370
             +   G   A E + R  HR   ++  G P+AR          +  G  P+ GR RH +R
Sbjct: 873  -KAESGEPGAREERPRP-HRSHSKEAAGPPEAR--------SERGRGPGPEGGR-RHHRR 921

Query: 371  GRP 379
            G P
Sbjct: 922  GSP 924

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>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 47/162 (29%), Positives = 60/162 (37%), Gaps = 4/162 (2%)
 Frame = +2

Query: 62  RAHLAPAGLRPPFPQEPHHPDETELSPGG--PVRRVQGQCGLLRRRREADGSA--VASER 229
           RA  APA   P     P      + +P    P RR         RR +AD SA   A + 
Sbjct: 64  RAAQAPAA--PAAETAPAAASSEDAAPAAERPARRRS-------RRADADTSAPAAAQDG 114

Query: 230 QVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGR 409
           Q +A  R    +Q  R  A + D +   EA+  G   D  +S    RGR           
Sbjct: 115 QPQAEAREAQTEQAPRETASDQDRSGGSEARDEG--EDRPQSERRSRGR----------- 161

Query: 410 EVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHR 535
              RR GDD     QDR +   Q     D     RRG ++ R
Sbjct: 162 ---RRAGDDDAQQGQDRRSDGAQGEDGADAD---RRGDREDR 197

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>STIM2_HUMAN (Q9P246) Stromal interaction molecule 2 precursor|
          Length = 746

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +2

Query: 62  RAHLAPAGLRPPFPQEPHHPDETE---LSPGGPVRRVQGQCGLLRRRREADGSAVASERQ 232
           RA LAP    P  P+ PHHP  T     SP   +  V     L R   E +    ++E+Q
Sbjct: 528 RAQLAPHAPHPSHPRHPHHPQHTPHSLPSPDPDILSVSSCPALYRNEEEEEAIYFSAEKQ 587

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>FMR2_ANTEL (Q16994) Antho-RFamide neuropeptides type 2 precursor [Contains:|
           Antho-RFamide]
          Length = 429

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 39/116 (33%), Positives = 47/116 (40%), Gaps = 14/116 (12%)
 Frame = +2

Query: 155 RRVQGQCGLLRRRR--EADGSAVASERQVRAGH----RPGPEDQE--GRPD----ARELD 298
           R +QG+ G   + R    D      E Q R G     R G EDQ   GR D     RE  
Sbjct: 215 RELQGRFGREFQGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQ 274

Query: 299 AALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQG--DDQRLGAQDR 460
               +E Q   G  D GR     +GR    D  R GRE+  R G  D  R G +D+
Sbjct: 275 GRFGRELQGRFGREDQGRFGREDQGRFGREDQGRFGRELQGRFGREDQGRFGREDQ 330



 Score = 31.6 bits (70), Expect = 1.6
 Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
 Frame = +2

Query: 140 PGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEA 319
           PG   R +QG+ G     RE  G     E Q R G              REL     +E 
Sbjct: 186 PGRYGRELQGRFG-----RELQGR-FGREAQGRFG--------------RELQGRFGREF 225

Query: 320 QAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQG--DDQRLGAQDR 460
           Q   G  D GR     +GR    D  R GRE   R G  D  R G +D+
Sbjct: 226 QGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGREDQ 274

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>SCG1_PIG (Q9GLG4) Secretogranin-1 precursor (Secretogranin I) (SgI)|
           (Chromogranin B) (CgB) [Contains: Peptide SR-17; Peptide
           HQ-34; Peptide KR-11]
          Length = 668

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
 Frame = +2

Query: 44  RGHHRLRAHLAPAGLRPPFPQEPHHP-----DETELSPGGPVR---RVQGQCGLLRRRRE 199
           RGH R  +  +  GL  P  Q   HP      E E   G  VR    VQ    L+  R  
Sbjct: 299 RGHPREESEESVLGLASPGGQRTRHPTHYPASEEEAEHGEEVRSSSSVQAPGDLVGARYG 358

Query: 200 ADGSAVASERQVRAGHRPGPE--DQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 370
             G A     + RA  RPG E  +Q+ R  A    + LR +   H  E +  R    QR
Sbjct: 359 GRGGA-----EHRAARRPGEESPEQDRRVGA---SSELRNKGPGHSEESEEERGDEGQR 409

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>FMR1_ANTEL (P10419) Antho-RFamide neuropeptides type 1 precursor [Contains:|
           Antho-RFamide]
          Length = 435

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 42/116 (36%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
 Frame = +2

Query: 140 PGGPVRRVQGQCGLL---RRRREADGSAVASERQVRAGH----RPGPEDQEGRPDARELD 298
           PG   R +QG+ G     R  REA G     E Q R G     R G EDQ GR   RE  
Sbjct: 186 PGRYGRELQGRFGRELQGRFGREAQGR-FGRELQGRFGREFQGRFGREDQ-GR-FGREDQ 242

Query: 299 AALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDD--QRLGAQDR 460
               +E Q   G  D GR     +GR    D  R GRE+  R G +   R G +D+
Sbjct: 243 GRFGREDQGRFGREDQGRFGREDQGRFGREDQGRFGRELQGRFGREFQGRFGREDQ 298

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>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)|
          Length = 1336

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 46/162 (28%), Positives = 59/162 (36%), Gaps = 4/162 (2%)
 Frame = +2

Query: 8    QQAGRQEH---REP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCG 178
            +Q+G  EH   R P RG    R      G  P FP +   PD+       P +R     G
Sbjct: 976  EQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFH-----PDKRF----G 1026

Query: 179  LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 358
               R  E  G  +  E + R G  PGP      PD RE                  G  R
Sbjct: 1027 HRLREFEGRGGPLPQEEKWRRG-GPGPPFP---PDHREFSE---------------GDGR 1067

Query: 359  HAQRGRPSTRDIVRSGREVLRRQGDDQRL-GAQDRAAQRVQP 481
             A RG P   +  R G E   R  +D R  G ++ + +R  P
Sbjct: 1068 GAARGPPGAWEGRRPGDERFPRDPEDPRFRGRREESFRRGAP 1109

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>BEGIN_RAT (O88881) Brain-enriched guanylate kinase-associated protein|
          Length = 611

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 23/70 (32%), Positives = 27/70 (38%)
 Frame = +3

Query: 132 SYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRTKKDDLMRASSMRRYG 311
           S  P    D       S GDG+R  VQL      C PG+ P       D +  SSM    
Sbjct: 519 SLSPSRSADPLPGYATSDGDGDRLGVQL------CGPGSSPEPEHGSRDSLEPSSMEASP 572

Query: 312 RKHKPTVANP 341
             H PT  +P
Sbjct: 573 EMHPPTRLSP 582

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>CWC26_CRYNE (Q5KM20) Pre-mRNA-splicing factor CWC26|
          Length = 331

 Score = 33.5 bits (75), Expect = 0.41
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 22/174 (12%)
 Frame = +2

Query: 74  APAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRP 253
           +P  ++P   +EP   D    +   PV+  + + GL    R A      +ER++     P
Sbjct: 112 SPQDIKPDIKEEP---DIDGPAASAPVQMTKRRGGL----RTAAQLKEDTERELAEQRSP 164

Query: 254 GPEDQEGRPDARE----------LDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRS 403
            P + E RPD  E          +D   RQE +    E +  R + A+R   +   + R 
Sbjct: 165 SPAEGEERPDPTETVHRDATGKIIDVKKRQEEERIREEEE--RRKEAERKEWTKGMVQRR 222

Query: 404 GREVLR------------RQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQ 529
            RE  R            R  DD R+  + +  +R     A  L    ++GP++
Sbjct: 223 DREERRRLEKKMAEADVGRSKDDVRMNKEMKEEERWNDPAAAFLTKKKKKGPRR 276

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>PCLO_CHICK (Q9PU36) Protein piccolo (Aczonin) (Fragment)|
          Length = 5120

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           +AQQAG  + +    G  +  A       +PP P     P +T L   GPV++V  Q G 
Sbjct: 262 SAQQAGPPKQQP---GSEKPTAQQTGPAKQPPQPG----PGKTPLQQTGPVKQVPPQAGP 314

Query: 182 LRRRREADGSAVASERQ----VRAGHRPGPE 262
            +   +  G+A +  +Q       G +PGPE
Sbjct: 315 TKPSSQTAGAAKSLAQQPGLTKPPGQQPGPE 345

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>IF2_ANAMM (Q5PAJ5) Translation initiation factor IF-2|
          Length = 832

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
 Frame = +2

Query: 146 GPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPG--PEDQEGRPDARELDAALRQEA 319
           G V RV    G+  R+  A GS VASE   R  HRP    + Q  R  +   D+ L  E 
Sbjct: 272 GDVLRVLSHMGVEARQNTAIGSDVASEVAERFSHRPKVVSKIQMERELSDISDSGLALEP 331

Query: 320 QAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRR-QGDDQRLGA 451
           +     P V    H   G+ S  D++R      +  +G  Q +GA
Sbjct: 332 R----PPVVTVMGHVDHGKTSLLDVLRKSNVAEKEFRGITQHIGA 372

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>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)|
          Length = 415

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 32/121 (26%), Positives = 43/121 (35%), Gaps = 3/121 (2%)
 Frame = +2

Query: 26  EHREP*RGHHRLRAHLAPAGLRPPFPQE---PHHPDETELSPGGPVRRVQGQCGLLRRRR 196
           + R P +G   L     PAG   P PQ    P    +  +S   P+ + QG     R+ R
Sbjct: 210 QQRPPPQGQQHLSGLGPPAG--SPLPQRLPSPTSAPQQPVSQAQPLSQAQG-----RQSR 262

Query: 197 EADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGR 376
              G   A     R    P P+ Q G P A    +   Q      G P  G+ R     +
Sbjct: 263 PVAGGPGAPPA-ARPPASPSPQRQAGPPQATRQTSVSGQAPPKASGAPPSGQQRQGPPQK 321

Query: 377 P 379
           P
Sbjct: 322 P 322

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>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2339

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 43/174 (24%), Positives = 59/174 (33%), Gaps = 17/174 (9%)
 Frame = +2

Query: 11   QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHH---------PDETELSPGGPVRRV 163
            + GR   R P  G  R     AP G  PP     H          P   E      +R  
Sbjct: 821  EPGRDAPRGPPGGKSRPDGSEAPEGADPPRRHHRHRDKDKAPATVPSAGEQDRAEALRAE 880

Query: 164  QGQCGLLRRR---READGSAVASERQVRAGHRPGPEDQEGRPDARE---LDAALRQEAQ- 322
             G+ G    R   R +         +VR+    GP  + GR   R     +AA R+  + 
Sbjct: 881  GGELGPREERGRPRRSRSKEAPGAPEVRSDRGRGPCPEGGRRHHRRGSPEEAAEREPRRH 940

Query: 323  -AHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQP 481
             AH   PD G+   A   R   R   R+G     R+ +     A+   A+   P
Sbjct: 941  RAHRHGPDPGKEGPASGTRGERRARHRTGPRACPREAESSEEPARRHRARHKAP 994

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>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
 Frame = +2

Query: 122 DETELSPGGPV----RRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDAR 289
           D+TE  P        RR +G  G  R RR A+   V++  +     +P P     RP  R
Sbjct: 317 DDTETEPETDAEVESRRTRGASGAARARRPAERQYVSTRGRQTPAVQPAPRSLARRPCGR 376

Query: 290 ELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTR 388
               +    +++ GG  D  R   A R  P+ +
Sbjct: 377 AAAVSAPPSSRSRGGRRD-PRLPAAPRAAPAAQ 408

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>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 32.7 bits (73), Expect = 0.70
 Identities = 25/93 (26%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
 Frame = +2

Query: 122 DETELSPGGPV----RRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDAR 289
           D+TE  P        RR +G  G  R RR A+   V++  +     +P P     RP  R
Sbjct: 317 DDTETEPETDAEVESRRTRGASGAARARRPAERQYVSTRGRQTPAVQPAPRSLARRPCGR 376

Query: 290 ELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTR 388
               +    +++ GG  D  R   A R  P+ +
Sbjct: 377 AAAVSAPPSSRSRGGRRD-PRLPAAPRAAPAAQ 408

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>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2494

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
 Frame = +2

Query: 83   GLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPE 262
            G +  FP  P++P    +SPG P                A  ++V++ER+ R   R    
Sbjct: 1742 GTQLAFPPRPYNP--ASMSPGHPTHL-------------AAANSVSAERE-RERERDRER 1785

Query: 263  DQEGRPDARELDAALRQEAQAHGGEPDVGRSRHA--QRGRPSTRDIVRSGREVLRRQ 427
            D+E   + RE +    +E +     P     R    Q GRP +   VRS    +R Q
Sbjct: 1786 DREREKEQRERERDRERERERLAAAPSDHYLRPVSEQPGRPGSHGFVRSPSPSVRAQ 1842

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>IF2_SILPO (Q5LWL4) Translation initiation factor IF-2|
          Length = 835

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
 Frame = +2

Query: 191 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRS---RH 361
           +REA+  A A ER+ R   +   E ++   + R  + A  +E Q    E +  R+     
Sbjct: 94  QREAEEKARAEERERRRAEQEAKEREQREAEQRAREKAEEEERQRREAEEEAKRAAVRAA 153

Query: 362 AQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQ 478
           A++  P             R +G D      DR  +R Q
Sbjct: 154 AEQEAPKAERSAERAPAAARPEGGDNARRTTDRDREREQ 192

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>RL28_MOUSE (P41105) 60S ribosomal protein L28|
          Length = 136

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +3

Query: 111 HTIQMRPSYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRT-KKDDLMR 287
           + ++ R S+   GL       V  + DG+  +V +  R+G+  P T  VR T  K+    
Sbjct: 29  NNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVMKRRSGQRKPATSYVRTTINKNARAT 88

Query: 288 ASSMRRYGRKHK 323
            SS+R   RK+K
Sbjct: 89  LSSIRHMIRKNK 100

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>RL28_HUMAN (P46779) 60S ribosomal protein L28|
          Length = 136

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +3

Query: 111 HTIQMRPSYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRT-KKDDLMR 287
           + ++ R S+   GL       V  + DG+  +V +  R+G+  P T  VR T  K+    
Sbjct: 29  NNLKARNSFRYNGLIHRKTVGVEPAADGKGVVVVIKRRSGQRKPATSYVRTTINKNARAT 88

Query: 288 ASSMRRYGRKHK 323
            SS+R   RK+K
Sbjct: 89  LSSIRHMIRKNK 100

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript|
            2)
          Length = 2157

 Score = 32.3 bits (72), Expect = 0.92
 Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
 Frame = +2

Query: 77   PAGLRPPF--PQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHR 250
            P G  PP   P  PH  D  EL    P+    G  G  R +R   G+       +R  HR
Sbjct: 1701 PPGSEPPRRPPPAPHDGDRKELPREQPLP--PGPIGTERSQRTDRGTEPGP---IRPSHR 1755

Query: 251  PGPEDQEGRPD 283
            PGP  Q G  D
Sbjct: 1756 PGPPVQFGTSD 1766

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>CWC22_MAGGR (Q52B63) Pre-mRNA-splicing factor CWC22|
          Length = 907

 Score = 28.5 bits (62), Expect(2) = 0.98
 Identities = 21/65 (32%), Positives = 29/65 (44%)
 Frame = +2

Query: 182 LRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRH 361
           +R RRE +G+   S RQ+ A H   P   + R + R  DA         GG  D  R   
Sbjct: 43  MRERREEEGNEQRSPRQI-AHHPRSPRGSDRRAEPRRRDAG--------GGGGDKYRPAK 93

Query: 362 AQRGR 376
           A++ R
Sbjct: 94  ARKQR 98



 Score = 22.3 bits (46), Expect(2) = 0.98
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 142 RRACTTSPRPMWPPPATARGRW 207
           R A + SPRP  P PA     W
Sbjct: 7   RDARSPSPRPRSPSPAAPSRSW 28

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>TSSC4_MOUSE (Q9JHE7) Protein TSSC4|
          Length = 317

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/87 (25%), Positives = 35/87 (40%)
 Frame = +2

Query: 11  QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRR 190
           +A  Q +R+        R+ ++     P F Q+P    E  +    PVR  + +    R 
Sbjct: 169 EASEQSNRDAALAFLSSRSQVSHTDYVPSFNQDPSSCGEGRVVFTKPVRDSEARAERKRV 228

Query: 191 RREADGSAVASERQVRAGHRPGPEDQE 271
            ++  GS    E  V   H  GPE +E
Sbjct: 229 LKKGVGSGAGGEAAVELAHLAGPEAEE 255

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>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (Helicase of 117.4 kDa)
          Length = 1032

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 350 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 472
           R R A RGR  +R   RS  +   ++GDD+R  ++DR  +R
Sbjct: 9   RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49

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>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 350 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 472
           R R A RGR  +R   RS  +   ++GDD+R  ++DR  +R
Sbjct: 9   RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49

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>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 350 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 472
           R R A RGR  +R   RS  +   ++GDD+R  ++DR  +R
Sbjct: 9   RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49

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>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (PRP5 homolog)
          Length = 1032

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 16/41 (39%), Positives = 24/41 (58%)
 Frame = +2

Query: 350 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQR 472
           R R A RGR  +R   RS  +   ++GDD+R  ++DR  +R
Sbjct: 9   RKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRR 49

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>MECP2_MACFA (Q95LG8) Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2)|
          Length = 486

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 31/141 (21%), Positives = 49/141 (34%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           +A    ++EH      HH   +  AP  L PP P  P  P+ +E  P  P         +
Sbjct: 357 SASSPPKKEHHHH---HHHSESPKAPVPLLPPLPPPPPEPESSE-DPTSPPEPQDLSSSV 412

Query: 182 LRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRH 361
            +  +   G ++ S+         G   +  +       AA   E   H GE +      
Sbjct: 413 CKEEKMPRGGSLESD---------GCPKEPAKTQPAVATAATAAEKYKHRGEGERKDIVS 463

Query: 362 AQRGRPSTRDIVRSGREVLRR 424
           +   RP+  + V S   V  R
Sbjct: 464 SSMPRPNREEPVDSRTPVTER 484

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>MECP2_HUMAN (P51608) Methyl-CpG-binding protein 2 (MeCP-2 protein) (MeCP2)|
          Length = 486

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 31/141 (21%), Positives = 49/141 (34%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           +A    ++EH      HH   +  AP  L PP P  P  P+ +E  P  P         +
Sbjct: 357 SASSPPKKEHHHH---HHHSESPKAPVPLLPPLPPPPPEPESSE-DPTSPPEPQDLSSSV 412

Query: 182 LRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRH 361
            +  +   G ++ S+         G   +  +       AA   E   H GE +      
Sbjct: 413 CKEEKMPRGGSLESD---------GCPKEPAKTQPAVATAATAAEKYKHRGEGERKDIVS 463

Query: 362 AQRGRPSTRDIVRSGREVLRR 424
           +   RP+  + V S   V  R
Sbjct: 464 SSMPRPNREEPVDSRTPVTER 484

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>CAR10_MOUSE (P58660) Caspase recruitment domain-containing protein 10|
           (Bcl10-interacting MAGUK protein 1) (Bimp1)
          Length = 1021

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +2

Query: 152 VRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQ 322
           V R++ +C LLRR R               G  PG E++E  PD  +L + LR E Q
Sbjct: 241 VSRLEEECALLRRAR---------------GPPPGAEEKEREPDGADLLSELRAENQ 282

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>PP16A_MOUSE (Q923M0) Protein phosphatase 1 regulatory subunit 16A (Myosin|
           phosphatase targeting subunit 3)
          Length = 524

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 19/98 (19%)
 Frame = +2

Query: 158 RVQG-QCGLLRRRREADGSAVASERQVRAGHR-----------------PGPEDQEGRPD 283
           R QG Q  LLRRR  + GS     R+V   HR                 P P   E   D
Sbjct: 326 RAQGRQRSLLRRRTSSAGSRGKVVRRVSLTHRTNLYRKEHAQEAIVWQQPPPTSPEPLED 385

Query: 284 A-RELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDI 394
             R+ DA LR +     G P+V R  + Q G P  R +
Sbjct: 386 EDRQTDAELRLQPPEDDG-PEVARPHNGQVGAPPGRHL 422

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>DXR_PROMM (Q7V6J8) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC|
           1.1.1.267) (DXP reductoisomerase)
           (1-deoxyxylulose-5-phosphate reductoisomerase)
           (2-C-methyl-D-erythritol 4-phosphate synthase)
          Length = 412

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 38/124 (30%), Positives = 55/124 (44%)
 Frame = -2

Query: 551 NLPASLDAVEVLAEGAPQDPQLGQAELVGLLDLGLPNVDRRLGAVVLLALNVRYRVLMAA 372
           N+ AS D+ +++  G           +VG   L LP +   + A   LAL  +  ++ AA
Sbjct: 87  NVAASWDSADLVVSG-----------IVGCAGL-LPTL-AAIKAGKDLALANKETLIAAA 133

Query: 371 LVEHGEIDRHRVRHRGLVLPAVAPHRARAHQVVLLGPPDRDGARRAPAVPMPQLNHRPLA 192
            V   E+ R   R    +LPA + H A      L G P  + AR +  VP P L H  L 
Sbjct: 134 PVVLPELKRSGSR----LLPADSEHSAIFQ--CLQGTPWAENARLSTGVPTPGLRHIQLT 187

Query: 191 VAGG 180
            +GG
Sbjct: 188 ASGG 191

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>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2|
          Length = 984

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 43/165 (26%), Positives = 55/165 (33%), Gaps = 4/165 (2%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           AA QA  +    P RG         PAG RP  P+           PGGP    QG    
Sbjct: 267 AAAQAREERAERPDRGPR-------PAGARPAGPR-----------PGGPR---QGDS-- 303

Query: 182 LRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEP--DVGRS 355
               R  DG             RP P     RP      A   Q AQA    P  D    
Sbjct: 304 ----RPGDG-------------RPAPRSGAPRPGGARPAAGFGQPAQAENSSPFADGQSK 346

Query: 356 RHAQRGRPSTR--DIVRSGREVLRRQGDDQRLGAQDRAAQRVQPV 484
           +  Q+GR +    D    G+++    G +   G + +     +PV
Sbjct: 347 KKRQKGRRTVEFGDKGAGGKKMREDVGGNWNRGKKGKRKPETKPV 391



 Score = 29.3 bits (64), Expect = 7.8
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
 Frame = +2

Query: 146 GPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDAR-ELDAALRQEAQ 322
           G  RR  G   ++ RRR     A  + R+  A      +    +P+A+    AA  +EA 
Sbjct: 57  GDARRKDGASDVIIRRRRKGSGAKPAAREEAAPAETEAQASPAQPEAKAAAPAAEAEEAP 116

Query: 323 AHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQPVP 487
           A    P   R   A+   P  R I+R        Q +++   A + AA   QP P
Sbjct: 117 AAKPAPAKARKAEARTEAPRAR-IIRPATP----QAEEKAEPAPETAAP-AQPAP 165

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>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 496

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 31/107 (28%), Positives = 44/107 (41%)
 Frame = +2

Query: 221 SERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVR 400
           ++R+ R   R    D   R  +R+     R E +  GG  D  RSR  +R R        
Sbjct: 56  NDRKKRKRSRSRDRDTRRRSRSRD-----RGERRGGGGGGDRDRSRSRERRRGG------ 104

Query: 401 SGREVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHRGW 541
            GR+  RR+G D      D A  R +P P         R P+++R W
Sbjct: 105 GGRDEPRRRGGD------DEARSRREPEPQKP------REPKKYRFW 139

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>TSSC4_RAT (Q5XIB1) Protein TSSC4|
          Length = 317

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 6/133 (4%)
 Frame = +2

Query: 11  QAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRR 190
           +   Q +R+        R+  +P    P F Q+P    E  +    PVR  + +    R 
Sbjct: 169 ETSEQSNRDAALAFLSSRSQASPTDYVPFFNQDPSSCGEGRVVFTKPVRGSEARAERKRV 228

Query: 191 RREADGSAVASERQVRAGHRPGPEDQE-----GRPDARELDAALRQEAQAHG-GEPDVGR 352
            ++   S    E  V   H  GPE +E     G+P+      A R E+ +   G   VG 
Sbjct: 229 LKKGVVSGAGGEASVELAHLAGPEAEEWSGHQGQPEVVVPSEAARPESSSGPIGMKTVGF 288

Query: 353 SRHAQRGRPSTRD 391
               +R R   R+
Sbjct: 289 HGSKKRSRDHFRN 301

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>NANR_SHIFL (P0A8W1) Transcriptional regulator nanR|
          Length = 263

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 179 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 358
           ++RRR   +G  + SER++ A          GRP  RE  AAL+++     G   +    
Sbjct: 43  MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91

Query: 359 HAQRGRPSTRDIV 397
            A+  RPS   I+
Sbjct: 92  RARVSRPSADTII 104

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>NANR_ECOLI (P0A8W0) Transcriptional regulator nanR|
          Length = 263

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 179 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 358
           ++RRR   +G  + SER++ A          GRP  RE  AAL+++     G   +    
Sbjct: 43  MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91

Query: 359 HAQRGRPSTRDIV 397
            A+  RPS   I+
Sbjct: 92  RARVSRPSADTII 104

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>NANR_ECOL6 (Q8FD57) Transcriptional regulator nanR|
          Length = 263

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 179 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 358
           ++RRR   +G  + SER++ A          GRP  RE  AAL+++     G   +    
Sbjct: 43  MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91

Query: 359 HAQRGRPSTRDIV 397
            A+  RPS   I+
Sbjct: 92  RARVSRPSADTII 104

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>NANR_ECO57 (Q8X4W4) Transcriptional regulator nanR|
          Length = 263

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +2

Query: 179 LLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSR 358
           ++RRR   +G  + SER++ A          GRP  RE  AAL+++     G   +    
Sbjct: 43  MIRRREFGEGEQLPSERELMAFF------NVGRPSVREALAALKRK-----GLVQINNGE 91

Query: 359 HAQRGRPSTRDIV 397
            A+  RPS   I+
Sbjct: 92  RARVSRPSADTII 104

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>UVRC_WOLSU (Q7M8K0) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 602

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 12/117 (10%)
 Frame = +2

Query: 131 ELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALR 310
           E   G  V   +G C    RR   +G    S+ +   G R    D+E  PD   LD  L 
Sbjct: 406 EACVGAMVVYEEGFCKESYRRYALEGRDEYSQMREMLGRRAEAFDRESPPDLWLLDGGLG 465

Query: 311 QEAQAHGGEPDVGRS------------RHAQRGRPSTRDIVRSGREVLRRQGDDQRL 445
           Q   A      +G +              A R + + +DI+R+  E +R    D+RL
Sbjct: 466 QIRLAQEIIESLGANVEIIAIAKEKIDAKAHRAKGAAKDILRTPTEEIRLLPSDKRL 522

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>PKNA_MYCTU (P65726) Probable serine/threonine-protein kinase pknA (EC|
           2.7.11.1)
          Length = 431

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 191 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 370
           R  + G    +   VRAG RP P   +  P  R   AA+     A       GR+  ++R
Sbjct: 260 RYRSGGPFADAVAAVRAGRRP-PRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRR 318

Query: 371 GRPST 385
            RP+T
Sbjct: 319 SRPAT 323

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>PKNA_MYCBO (P65727) Probable serine/threonine-protein kinase pknA (EC|
           2.7.11.1)
          Length = 431

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +2

Query: 191 RREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQR 370
           R  + G    +   VRAG RP P   +  P  R   AA+     A       GR+  ++R
Sbjct: 260 RYRSGGPFADAVAAVRAGRRP-PRPSQTPPPGRAAPAAIPSGTTARVAANSAGRTAASRR 318

Query: 371 GRPST 385
            RP+T
Sbjct: 319 SRPAT 323

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>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556|
          Length = 395

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
 Frame = +2

Query: 11  QAGRQEHREP*RGHHRLRAHLAPAGLRPPFP-QEPHHPDETELSPGGPVRRVQGQCGLLR 187
           + GRQ  R P     RL+  L    LRP    +   H  + +     P R V G  G  +
Sbjct: 137 ERGRQLRRRPLHARQRLQLLLRALALRPGQQLRRDQHLQQVQRVVHRPRREVHG--GGQQ 194

Query: 188 RRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAA 304
           RR+ A     A +R++     PG   Q  R   R ++ A
Sbjct: 195 RRQAASVGVPAQQRRLAVHPVPGQLRQPARRYPRHINGA 233

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>BEGIN_MOUSE (Q68EF6) Brain-enriched guanylate kinase-associated protein|
          Length = 600

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/70 (31%), Positives = 27/70 (38%)
 Frame = +3

Query: 132 SYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRTKKDDLMRASSMRRYG 311
           S  P    D      AS GDG+R  VQL      C  G+ P       + +  SSM    
Sbjct: 508 SLSPSRSADALAGYAASDGDGDRLRVQL------CGAGSSPEPEHGSRESLEPSSMEASP 561

Query: 312 RKHKPTVANP 341
             H PT  +P
Sbjct: 562 EMHPPTRLSP 571

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>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)|
          Length = 815

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +2

Query: 38  P*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           P  G +++     P+ L PP P   +HP      PGGP   + G  G+
Sbjct: 559 PGMGMNQMLPPQQPSHLGPPHPNMMNHPHHPHHHPGGPPPHMMGGPGM 606

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>Y748_CAUCR (Q9AA58) UPF0209 protein CC0748|
          Length = 591

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 48/175 (27%), Positives = 64/175 (36%), Gaps = 11/175 (6%)
 Frame = +2

Query: 14  AGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRR 193
           AG +  + P  G  R R      G+RP   Q P    ET    GG +        L R  
Sbjct: 210 AGFEIAKRPGFGRKRERLEAWRPGVRP-VAQRP----ETLAIIGGGI----AGAALARAA 260

Query: 194 REA--------DGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPDVG 349
           R A        D  AVA+     A   P   D  G P A     AL +    +  +PD  
Sbjct: 261 RAAGLEVTVIDDADAVAASGNPAALVTPAL-DAGGGPRAALYAQALSRAVTLYEAQPDAV 319

Query: 350 RSRHAQRGRPSTRDIVRSGR---EVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGG 505
            +R   +     RD  R      + L   GD + L A+D  A+   P PA+ + G
Sbjct: 320 LAREVLQLAAGERDPARFATVADQDLFEPGDMRTLEAEDTRARLETPTPALAMAG 374

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>RP3A_BOVIN (Q06846) Rabphilin-3A (Exophilin-1)|
          Length = 704

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 19/99 (19%)
 Frame = +2

Query: 74  APAGLR---PPFPQEPHHPDETELSPGGPVRRVQGQ-----------CGLLRRRREA--- 202
           APA ++   PP P +P  P  +  SPG P  R   Q            G   + RE    
Sbjct: 284 APASMQSPAPPQPGQPGPPGGSRPSPG-PTGRFPDQRPEVAPSDPDYTGAAAQPREERTG 342

Query: 203 --DGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQ 313
              G + A  R+ RAGH PG   Q      + + A+ RQ
Sbjct: 343 GIGGYSAAGTREDRAGHPPGSYTQASAAAPQPVVASARQ 381

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>RL28_RAT (P17702) 60S ribosomal protein L28|
          Length = 136

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
 Frame = +3

Query: 111 HTIQMRPSYHPEGLYDESKANVASSGDGERPMVQLWHRNGRCAPGTVPVRRT-KKDDLMR 287
           + ++ R S+   GL       V +  DG+  +V +  R+G+  P T  VR T  K+    
Sbjct: 29  NNLKARNSFRYNGLIHRKTVGVEAWPDGKGVVVVMKRRSGQRKPATSYVRTTINKNARAT 88

Query: 288 ASSMRRYGRKHK 323
            SS+R   RK+K
Sbjct: 89  LSSIRHMIRKNK 100

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>KIF1C_RAT (O35787) Kinesin-like protein KIF1C (Kinesin-like protein KIF1D)|
          Length = 1097

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 23/88 (26%), Positives = 30/88 (34%), Gaps = 11/88 (12%)
 Frame = +2

Query: 77   PAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPG 256
            P   RPP P+ PH P    L  G   R         +  R    ++   + Q     RPG
Sbjct: 1010 PPNRRPPSPRRPHRPRRNSLDGGSRSRGGGSTQPEPQHLRPQKHNSYPQQPQPYPAQRPG 1069

Query: 257  P-----------EDQEGRPDARELDAAL 307
            P             Q   PD +E  AA+
Sbjct: 1070 PRYPPYTTPPRMRRQRSAPDLKESGAAV 1097

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>RHSB_ECOLI (P16917) Protein rhsB precursor|
          Length = 1411

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           A +  GR E R       R+   L PAGL   +  E      T+      V   QG+ GL
Sbjct: 348 AHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGL 407

Query: 182 LR--RRREADGSAVASE 226
            R  ++  ADGS   S+
Sbjct: 408 KRVVKKEHADGSVTQSQ 424

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>RHSA_ECOLI (P16916) Protein rhsA precursor|
          Length = 1377

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           A +  GR E R       R+   L PAGL   +  E      T+      V   QG+ GL
Sbjct: 348 AHRHTGRPEIRYRYDSDGRVTEQLNPAGLSYTYQYEKDRITITDSLDRREVLHTQGEAGL 407

Query: 182 LR--RRREADGSAVASE 226
            R  ++  ADGS   S+
Sbjct: 408 KRVVKKEHADGSVTQSQ 424

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>VE2_HPV15 (P36784) Regulatory protein E2|
          Length = 382

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 30/113 (26%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
 Frame = +2

Query: 197 EADGSAVASERQVRAGHRPGPEDQEGRPDARELDAAL----RQEAQAHGGEPDVGRSRHA 364
           E+  +   S   V +  R  P  +  R + +E         RQ+ Q    E    RSR  
Sbjct: 143 ESPANRQLSSTSVSSRKRTPPRTEARRYNRKESSPTTTTTRRQKRQGQRQEDTARRSRST 202

Query: 365 QRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGP 523
            RGR   ++I R G +  RR+  +  +             PA   GG  RRGP
Sbjct: 203 SRGR---QEISRGGNQRRRRRSRETSIS------------PAWGRGGRSRRGP 240

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>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C|
          Length = 1103

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +2

Query: 17   GRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVR 157
            G  E   P +    +  H A    RPP P+  HHP    L  GG  R
Sbjct: 995  GSGEAPTPLQPPEEVTPHPATPARRPPSPRRSHHPRRNSLDGGGRSR 1041

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>M1200_ARATH (P92550) Hypothetical mitochondrial protein AtMg01200 (ORF294)|
          Length = 294

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
 Frame = +2

Query: 95  PFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEG 274
           PFP EP  PD   +SP  P+     +          +       ++++   R   E++  
Sbjct: 159 PFPAEPGSPD--PVSPPPPIASFYSRIERAESLHAGNIELAEDLQRIQEMER-NLENERS 215

Query: 275 RPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSG--REVLRRQGDDQRL 445
               REL A +  E +   G+  V R+R     R +  DI R G  +E++R+Q ++ RL
Sbjct: 216 PYRGRELAARIDWEVRELEGK--VARNRAWDMVRDAQLDIWRQGLDQELVRQQENESRL 272

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>CATA2_MAIZE (P12365) Catalase isozyme 2 (EC 1.11.1.6)|
          Length = 491

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 13/71 (18%)
 Frame = -2

Query: 389 RVLMAALVEHGEIDRHRVRHRGLVLPAVAPHRA-------------RAHQVVLLGPPDRD 249
           ++L   +  + +  RHR+    L+LPA AP  A               H+ V   P   D
Sbjct: 338 KLLQTRIFSYSDTQRHRLGPNYLLLPANAPKCAHHNNHYDGSMNFMHRHEEVDYFPSRYD 397

Query: 248 GARRAPAVPMP 216
             R AP  P+P
Sbjct: 398 AVRNAPRYPIP 408

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>RBMX2_MOUSE (Q8R0F5) RNA-binding motif protein, X-linked 2|
          Length = 326

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 26/98 (26%), Positives = 36/98 (36%), Gaps = 21/98 (21%)
 Frame = +2

Query: 209 SAVASERQVRAGHRPGPEDQEGRPDAR---------------------ELDAALRQEAQA 325
           S+  SER  ++ HR   +   G PD R                     E  +A R+EA+ 
Sbjct: 205 SSKTSERAQKSEHRESKKSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEE 264

Query: 326 HGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQ 439
              E + GRS     GR       RS R   R +  D+
Sbjct: 265 KSRERERGRSSGTHSGRHRGHSDGRSHRSRSRSRSPDK 302

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>FBXL6_MOUSE (Q9QXW0) F-box/LRR-repeat protein 6 (F-box and leucine-rich repeat|
           protein 6) (F-box protein FBL6)
          Length = 535

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
 Frame = -2

Query: 323 LVLPAVAPHRARAHQVVLLGPPDRDGARRAPAVPMPQLNHRP-------LAVAGGGHIGL 165
           LVLP + P RARAH+      P R  AR   AV  P+   RP       L    G  I L
Sbjct: 51  LVLPDLEPPRARAHRRARRRAP-RSLARGPTAVAKPRTKPRPEPSLDQGLDSGWGDRIPL 109

Query: 164 GLVVQALRVIARSH 123
            ++V    ++  +H
Sbjct: 110 EVLVHIFGLLVAAH 123

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>CAR10_HUMAN (Q9BWT7) Caspase recruitment domain-containing protein 10|
           (CARD-containing MAGUK protein 3) (Carma 3)
          Length = 1032

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 9/69 (13%)
 Frame = +2

Query: 152 VRRVQGQCGLLRRRREADGSAVASERQVRAGHRPG---------PEDQEGRPDARELDAA 304
           V R++ +C LLRR R     A   E++      P           E+Q+     REL   
Sbjct: 241 VSRLEEECALLRRARGPPPGAEEKEKEKEKEKEPDNVDLVSELRAENQQLTASLRELQEG 300

Query: 305 LRQEAQAHG 331
           L+QEA   G
Sbjct: 301 LQQEASRPG 309

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>MYH14_HUMAN (Q7Z406) Myosin-14 (Myosin heavy chain, nonmuscle IIc) (Nonmuscle|
            myosin heavy chain IIc) (NMHC II-C)
          Length = 1995

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = +2

Query: 185  RRRREADGSAVASERQVRAGH--RPGPEDQEGRPDARELDAALRQEAQA-HGGEPDVGRS 355
            R R EA+G     ER+ RA    R   E+QE R +    + ALR E +A    + DVG+S
Sbjct: 1488 RERAEAEGR----EREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGKS 1543

Query: 356  RH 361
             H
Sbjct: 1544 VH 1545

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>CH10_PROMM (Q7TUS3) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 103

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -2

Query: 326 GLVLPAVAPHRARAHQVVLLGPPDR--DGARRAPAV 225
           G++LP  A  + +  +VV +GP  R  DG+R+AP V
Sbjct: 32  GILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEV 67

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>IF2_LEIXX (Q6AG49) Translation initiation factor IF-2|
          Length = 916

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
 Frame = +2

Query: 254 GPEDQEGRPDARELDAALRQEAQAH----GGEPDVGRSRHAQR-GRPSTRD-----IVRS 403
           GP      P AR+L AAL  EA+ H    GG+    ++  A R  RP+T D       ++
Sbjct: 41  GPSSSIEPPVARKLRAAL--EAEGHLPGAGGDKTAAQASPAPRPPRPATADGSGAPKPQA 98

Query: 404 GREVLRRQGDDQRLGAQDRAAQRVQPVPAVD 496
              V  RQ   ++  ++  AA++V    A D
Sbjct: 99  PMSVAERQAAAEKAASEKAAAEKVAASEAAD 129

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>TCP10_HUMAN (Q12799) T-complex protein 10A homolog|
          Length = 416

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 45/182 (24%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
 Frame = +2

Query: 2   AAQQAGRQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGL 181
           A+  AGR+ H                  L P F +  H   + + +P    R+ Q    L
Sbjct: 109 ASPHAGRESHT---------------LALEPAFGKISHLSADEDTTPKYAGRKSQSAT-L 152

Query: 182 LRRRREADGSA------VASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGGEPD 343
           L +R  ++  A      + +ER + +G  P  ED+E  P  R  D +     +   G   
Sbjct: 153 LGQRWSSNHLAPPKPMSLKTER-INSGKTPPQEDREKSPPGRRQDRSPAPTGRPTPGAER 211

Query: 344 VGRSRHAQRGRPSTRDIVRSGREVLRRQGDD----QRLGAQDRAAQRVQPVPAVDLGGLL 511
            G S   +   PS+R    SG      Q       Q   A  R A R   V     GG L
Sbjct: 212 RGVSEDGKIMHPSSRSPQNSGGRKSPVQASQATTLQEQTAAARGADRSSSVLGSSEGGFL 271

Query: 512 RR 517
            R
Sbjct: 272 SR 273

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 36/156 (23%), Positives = 54/156 (34%), Gaps = 7/156 (4%)
 Frame = +2

Query: 89   RPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREAD----GSAVASERQVRAG---H 247
            RPP P  P HP     SP  P++ + G  G       A     G        ++AG    
Sbjct: 810  RPPSPHPPPHP-----SPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQ 864

Query: 248  RPGPEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQ 427
             PGP    G P           + QA  G        H     P+++  ++S     ++ 
Sbjct: 865  HPGPPQPFGLPPQ-------ASQGQAPLGTSPAAAYPHTSLQLPASQSALQS-----QQP 912

Query: 428  GDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHR 535
              +Q L     A   ++P P   +  L    PQ H+
Sbjct: 913  PREQPLPPAPLAMPHIKPPPTTPIPQL--PAPQAHK 946

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>MAON_SOLTU (P37225) NAD-dependent malic enzyme 59 kDa isoform, mitochondrial|
           precursor (EC 1.1.1.39) (NAD-ME)
          Length = 601

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = -2

Query: 248 GARRAPAVPMPQLNHRPLAVAGGGHIGLGLVVQALRVIAR 129
           G  RA   P+    ++ + V G G  GLG++  AL+ ++R
Sbjct: 309 GTVRAQGRPLTDFANQKIVVVGAGSAGLGVLKMALQAVSR 348

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>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)|
          Length = 392

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
 Frame = +2

Query: 182 LRRRREADGSAVASERQVRAGHRPGPEDQEG----RPDARELDAALRQEAQAHGGEPDVG 349
           LRR R    +   S  +    HR     +E     R  +RE     R  + +        
Sbjct: 258 LRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQ 317

Query: 350 RSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDR 460
           RSRH+ R R   R   RS +E  R    DQ L ++DR
Sbjct: 318 RSRHSSRDRSRERSKRRSSKERFR----DQDLASRDR 350

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>YNP1_CAEEL (P34554) Hypothetical protein T05G5.1 precursor|
          Length = 411

 Score = 29.6 bits (65), Expect = 5.9
 Identities = 29/110 (26%), Positives = 40/110 (36%), Gaps = 9/110 (8%)
 Frame = +2

Query: 152 VRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARE---------LDAA 304
           ++  Q Q  +   RR  D      ERQV    R   ED+E   D             +  
Sbjct: 90  IQHQQSQADIDDARRRDDERKREYERQVAERTRKEKEDRERASDEERRRQQHEQYWKEET 149

Query: 305 LRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQ 454
            R+E Q    E  +   R     R    +  RS  E  RR+ + +RL AQ
Sbjct: 150 ARREQQRAEAERRIQEQRVRDDERRRQHEAERSQIEERRREEESRRLAAQ 199

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>CH10_SYNP7 (P22880) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 103

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -2

Query: 326 GLVLPAVAPHRARAHQVVLLGPPDR--DGARRAPAV 225
           G++LP  A  + +  ++V +GP  R  DG+R+AP V
Sbjct: 32  GIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEV 67

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>CH10_SYNP6 (P07889) 10 kDa chaperonin (Protein Cpn10) (groES protein)|
          Length = 103

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
 Frame = -2

Query: 326 GLVLPAVAPHRARAHQVVLLGPPDR--DGARRAPAV 225
           G++LP  A  + +  ++V +GP  R  DG+R+AP V
Sbjct: 32  GIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQAPEV 67

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>CH10_MYCLE (P24301) 10 kDa chaperonin (Protein Cpn10) (groES protein) (10 kDa|
           antigen)
          Length = 99

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = -2

Query: 371 LVEHGEIDRHRVRHRGLVLPAVAPHRARAHQVVLLGPP--DRDGARRAP 231
           LV+ GE +   +   GLV+P  A  + +   VV +GP   D DGA+R P
Sbjct: 13  LVQAGEAET--MTPSGLVIPENAKEKPQEGTVVAVGPGRWDEDGAKRIP 59

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>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
 Frame = +2

Query: 143  GGPVRRVQGQCGLLRRRREADG--SAVASERQVRAGHRPGPEDQEGRPDARELDAALRQE 316
            G P RR   + G  R  R       A    R+ RA  RPG   +EG  D  E  A  R+ 
Sbjct: 927  GDPHRRHVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPG---EEGPEDKAERRARHREG 983

Query: 317  AQ-AHGGE-----PDVGRSRHAQR-GRPST 385
            ++ A GGE     PD G  R   R G P+T
Sbjct: 984  SRPARGGEGEGEGPDGGERRRRHRHGAPAT 1013

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>INVO_TARBA (P24711) Involucrin|
          Length = 387

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
 Frame = +2

Query: 104 QEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRP----GPEDQE 271
           ++   P E E+ PG   ++ Q Q   L +++E  G  V   +Q +         G + QE
Sbjct: 84  RKQQEPQEQEVHPGKQQQKPQEQEAHLGKKQEPQGQEVHLGKQQQKTQEQEVHLGKQQQE 143

Query: 272 GRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQGDDQRLGA 451
            +     L+  L++  + H  +    +  H ++        +  G++    Q  +  LG 
Sbjct: 144 LQEQEVHLEKQLQEPQEVHLEKQLQEQEVHLEKQLQEPEPELNLGKQQQEPQEQEAYLGK 203

Query: 452 QDRAAQRVQPVPAVDLG 502
           Q +     Q  P + LG
Sbjct: 204 QQQELPEPQD-PELHLG 219

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>ADA2A_HUMAN (P08913) Alpha-2A adrenergic receptor (Alpha-2A adrenoceptor)|
           (Alpha-2A adrenoreceptor) (Alpha-2AAR) (Alpha-2
           adrenergic receptor subtype C10)
          Length = 450

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 30/113 (26%), Positives = 35/113 (30%), Gaps = 1/113 (0%)
 Frame = +2

Query: 89  RPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQ 268
           R   P     PD     PGG  RR     GL   R    G A A     +    PG    
Sbjct: 226 RTRVPPSRRGPDAVAAPPGGTERRPN---GLGPERSAGPGGAEAEPLPTQLNGAPGEPAP 282

Query: 269 EGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTR-DIVRSGREVLRR 424
            G  D   LD      +      P   R     RG+   R   V+ G  + RR
Sbjct: 283 AGPRDTDALDLEESSSSDHAERPPGPRRPERGPRGKGKARASQVKPGDSLPRR 335

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>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and|
           gyrB (ORF 3)
          Length = 437

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 4/124 (3%)
 Frame = +2

Query: 20  RQEHREP*RGHHRLRAHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRRE 199
           RQ+H+ P   H   R        R    ++P H          P RR + +    R  R+
Sbjct: 133 RQQHQHPRGRHASDRVQDGAHPRRQRLREQPRHAGRPRRRQ--PPRRGRSRGTHRRHLRQ 190

Query: 200 ADGSAVASERQVRAGHRPGPEDQEGR--PDARELDAALRQEAQAHGGEPDVGRSRH--AQ 367
           A   AV    + +A    GP  +  R  P AR++   LR       GEP  G   H   +
Sbjct: 191 APRPAVRGPDEDQAREFRGPRHRRERHPPTARDV---LR-------GEPGHGDGHHLEGR 240

Query: 368 RGRP 379
           RGRP
Sbjct: 241 RGRP 244

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>IF2_STRAG (P0A3K7) Translation initiation factor IF-2|
          Length = 927

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%)
 Frame = +2

Query: 149 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 328
           PV + + Q    +  REA   A A +RQ    HR      + R D R      R     +
Sbjct: 90  PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149

Query: 329 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 415
                   +R+   GR       P TR    +G  +
Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185

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>IF2_STRA5 (Q8E1H3) Translation initiation factor IF-2|
          Length = 927

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%)
 Frame = +2

Query: 149 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 328
           PV + + Q    +  REA   A A +RQ    HR      + R D R      R     +
Sbjct: 90  PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149

Query: 329 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 415
                   +R+   GR       P TR    +G  +
Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185

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>IF2_STRA3 (P0A3K6) Translation initiation factor IF-2|
          Length = 927

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%)
 Frame = +2

Query: 149 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 328
           PV + + Q    +  REA   A A +RQ    HR      + R D R      R     +
Sbjct: 90  PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149

Query: 329 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 415
                   +R+   GR       P TR    +G  +
Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185

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>IF2_STRA1 (Q3K302) Translation initiation factor IF-2|
          Length = 927

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/96 (23%), Positives = 33/96 (34%), Gaps = 7/96 (7%)
 Frame = +2

Query: 149 PVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAH 328
           PV + + Q    +  REA   A A +RQ    HR      + R D R      R     +
Sbjct: 90  PVAKPKPQSRNFKAEREARAKAEAEKRQHNGDHRKNNRHNDTRSDDRRHQGQKRSNGNRN 149

Query: 329 GGEPDVGRSRHAQRGR-------PSTRDIVRSGREV 415
                   +R+   GR       P TR    +G  +
Sbjct: 150 DNRQGQQNNRNKNDGRYADHKQKPQTRPQQPAGNRI 185

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>ZN213_HUMAN (O14771) Zinc finger protein 213 (Putative transcription factor|
           CR53)
          Length = 459

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = -2

Query: 266 GPPDRDGARRAPAVPMPQLNH--RPLAVAGGGHIG 168
           GPP   GARR P+VP  Q +H  +P A+   G  G
Sbjct: 153 GPPPTVGARRRPSVPQEQHSHSAQPPALLKEGRPG 187

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>YAV1_XANCV (P14727) Hypothetical 122 kDa avirulence protein in avrBs3 region|
          Length = 1164

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
 Frame = +3

Query: 138  HPEGLYDESKANVASSGDGERPMVQLWHRNG----RCAPGTVPVRRTKKDDLMRASSMRR 305
            HP   +D++      S  G   ++QL+ R G        GT+P    + D +++AS M+R
Sbjct: 966  HPAQAFDDAMTQFGMSRHG---LLQLFRRVGVTELEARSGTLPPASQRWDRILQASGMKR 1022

Query: 306  YGRKHKPTVANPMSVDLAMLN 368
                 KP+  +  + D A L+
Sbjct: 1023 ----AKPSPTSTQTPDQASLH 1039

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>PODJ_CAUCR (Q9ZG88) Localization factor podJL (Polar organelle development|
           protein) [Contains: Localization factor podJS]
          Length = 974

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
 Frame = +2

Query: 257 PEDQEGRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRP-STRDIVRSGREVLRRQGD 433
           PE+     D   +      E+  +  EP+V     A+  RP STRDI+   R   R    
Sbjct: 537 PEEPAFAHDDYAIADGFEPESPRYEVEPEVSDFAPAEPSRPMSTRDIIEQARAAARAAAA 596

Query: 434 DQRLGAQDRAAQR 472
            +  G + ++A++
Sbjct: 597 SEGKGGKAKSAKK 609

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>KIF1C_MOUSE (O35071) Kinesin-like protein KIF1C|
          Length = 1100

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 23/89 (25%), Positives = 29/89 (32%), Gaps = 11/89 (12%)
 Frame = +2

Query: 74   APAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRP 253
            AP   RPP P+ PH      L  G   R         +  R    +    + Q     RP
Sbjct: 1012 APPNRRPPSPRRPHRSRRNSLDGGSRSRGGGSTQPEPQHLRPQKHNGYPQQPQPSPAQRP 1071

Query: 254  GP-----------EDQEGRPDARELDAAL 307
            GP             Q   PD +E  AA+
Sbjct: 1072 GPRYPPYTTPPRMRRQRSAPDLKESGAAV 1100

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>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)|
          Length = 1244

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 24/94 (25%), Positives = 34/94 (36%)
 Frame = +2

Query: 65   AHLAPAGLRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAG 244
            +H     L PP P  PH PD + L        +Q     L      +G A A      AG
Sbjct: 947  SHSPSPSLPPPPPSPPHRPD-SPLFNSRCSSPLQLNLLQLEESPRTEGGAAAGGPGSSAG 1005

Query: 245  HRPGPEDQEGRPDARELDAALRQEAQAHGGEPDV 346
              P P ++   P+ R ++        A  G  D+
Sbjct: 1006 PLP-PSEESAEPEPRLVEVTESSNQDALSGSSDL 1038

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>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25|
          Length = 561

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 29/109 (26%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
 Frame = +2

Query: 155 RRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPEDQEGRPDARELDAALRQEAQAHGG 334
           RR + + G   RRRE +     S      G+R    ++  R  +RE     R   +    
Sbjct: 205 RRRRRRDGERTRRRERNRDPSPSVSDDDRGYRQSSREERDRKSSREEGGRSRSRDRYRNR 264

Query: 335 EPDVGRSR-HAQRGRPSTRDIVRSGREVLRRQGDDQRLGAQDRAAQRVQ 478
             +  R R   +R R  +R+ +RS R+   R  D  R   +DR    VQ
Sbjct: 265 SRERYRDRSREERSRDRSRERLRSRRD---RDRDRDRDRDRDRDRDNVQ 310

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>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 40/166 (24%), Positives = 59/166 (35%), Gaps = 21/166 (12%)
 Frame = +2

Query: 92  PPFPQEPHHPDETELSP-----------GGPVRRVQGQCGLLRRRREADGSAVASERQVR 238
           PP P  P  P   +  P           GGP  R   + G  RRR E   +A A   +  
Sbjct: 282 PPLPPPPPPPPPPQPPPAGGSARRRRRGGGPPGRGGRRRGGKRRRAEGTEAAAADAEEEE 341

Query: 239 AGHRPGPEDQE-GRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSG--- 406
            G     ED++    + RE      + A    GE +    R     R + + +  +G   
Sbjct: 342 DGDGDEDEDEDRAEGEGREDGGEGPRGAGGGAGESESESGRAEGAPRSAEQQVGVAGVLG 401

Query: 407 ----REVLRRQGDDQRLGAQDRAAQR--VQPVPAVDLGGLLRRGPQ 526
               R+ L   G ++  G    AA    +  VP +   G   RGP+
Sbjct: 402 LLVVRDGLHLDGPERAAGPAVAAADADDLHRVPVLAGAGPGARGPR 447

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>IF2_DESVH (Q72ER1) Translation initiation factor IF-2|
          Length = 1079

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 41/161 (25%), Positives = 60/161 (37%), Gaps = 6/161 (3%)
 Frame = +2

Query: 86  LRPPFPQEPHHPDETELSPGGPVRRVQGQCGLLRRRREADGSAVASERQVRAGHRPGPED 265
           +RP  P     PD T  +P  PVR  +    + R   +ADG    ++++ R   R  PE 
Sbjct: 203 VRPATPDASAVPDGTSSAPTLPVRSAEPSDTVERADADADGDDDDAQQRRRKKKRRQPEA 262

Query: 266 QE------GRPDARELDAALRQEAQAHGGEPDVGRSRHAQRGRPSTRDIVRSGREVLRRQ 427
                    RPD     A  +Q+ Q    +    + R A   RP  +      R   +R+
Sbjct: 263 VVPQVRVISRPDPA---AVAQQQMQQQAAQ----QQREAGGYRPGGQRPEGGYRPEGQRE 315

Query: 428 GDDQRLGAQDRAAQRVQPVPAVDLGGLLRRGPQQHRGWLAG 550
           G   R   Q     R    P  + GG    GP+   G+  G
Sbjct: 316 G-GYRPEGQREGGYRPGGAPRPE-GGYRPGGPRPEGGYRPG 354


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,659,922
Number of Sequences: 219361
Number of extensions: 1793171
Number of successful extensions: 7336
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 6844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7293
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result