ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14o22 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 311 bits (797), Expect = 1e-84 Identities = 144/164 (87%), Positives = 157/164 (95%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 MPAGHG+R+RTRDLFARPFRKKGYIPL+TYLRT+KVG+YVDVKVNGA+HKGMPHKFYHGR Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 411 TGR+WNVTKRA+GVE+NKQ+GNRIIRKRIHVRVEHVQ SRCAEEF+LRK KND+LKA AK Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAK 120 Query: 412 ARGEVISTKRQPLGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 543 A GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 121 ANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 174 bits (440), Expect = 3e-43 Identities = 90/158 (56%), Positives = 115/158 (72%), Gaps = 3/158 (1%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 MP +G R+RTR LFAR F+ G + L+TYL +K+GEYVDV N AVHKGMP K+YHGR Sbjct: 1 MPHSYGYRARTRALFARAFKTNGPVHLSTYLTNFKIGEYVDVVGNAAVHKGMPFKYYHGR 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 411 TG VWNVTKRAIGVEINK+V +RII+KRIHVR++HV+ S C + F R +ND++K +A Sbjct: 61 TGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAH 120 Query: 412 -ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 A+ V STKR P+ PK G ++ +G ET IPY+ Sbjct: 121 VAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIPYE 158
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 172 bits (435), Expect = 1e-42 Identities = 82/157 (52%), Positives = 111/157 (70%), Gaps = 2/157 (1%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 M HG RSRTR +F R FRK G + L+TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 411 TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 412 ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 A+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 171 bits (432), Expect = 2e-42 Identities = 81/157 (51%), Positives = 111/157 (70%), Gaps = 2/157 (1%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 M HG RSRTR +F R FRK G + ++TYL+ YKVG+ VD+K NG++ KGMPHKFY G+ Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFYQGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 411 TG V+NVTK ++GV INK VGNR + KR+++RVEH++ S+C +EF R N +AEAK Sbjct: 61 TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK 120 Query: 412 ARGEVISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 A+G + KRQP P+ +V EG +T+ P+PY+ Sbjct: 121 AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYE 157
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 165 bits (418), Expect = 1e-40 Identities = 81/157 (51%), Positives = 110/157 (70%), Gaps = 2/157 (1%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 411 TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 412 ARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 516 A+G+ + +RQP P V E VT P+ YD Sbjct: 121 AQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 165 bits (418), Expect = 1e-40 Identities = 81/157 (51%), Positives = 110/157 (70%), Gaps = 2/157 (1%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 MP +G+R+RTR F R FR+ G I L+TYL+TYKVG+ VD+KVNGAV KGMPHK+YHG+ Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIKVNGAVQKGMPHKYYHGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAK 411 TG V+NVT+ ++GV I K VGNR + KR++VR+EHV+ S+C ++F R N+ + EAK Sbjct: 61 TGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAK 120 Query: 412 ARGEVISTKRQPLGPKPGFMVEGTTIETVT--PIPYD 516 A+G+ + +RQP P V E VT P+ YD Sbjct: 121 AQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAYD 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 159 bits (402), Expect = 7e-39 Identities = 77/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 426 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 427 ISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 + KRQP P+ V G E + PIPY+ Sbjct: 125 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 158 bits (399), Expect = 2e-38 Identities = 76/152 (50%), Positives = 103/152 (67%), Gaps = 2/152 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G R TR +F+RP+RK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPYRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 426 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 427 ISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 + KRQP P+ V G E + PIPY+ Sbjct: 125 VQLKRQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 154 bits (389), Expect = 2e-37 Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 2/152 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 426 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 427 ISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 + QP P+ V G E + PIPY+ Sbjct: 125 VQLNGQPAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 154 bits (388), Expect = 3e-37 Identities = 75/152 (49%), Positives = 101/152 (66%), Gaps = 2/152 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KGMPHK YHG+TGRV+ Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVY 64 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 426 NVT+ A+G+ +NKQV +I+ KRI+VR+EH++ S+ + F R +NDQ K EAK +G Sbjct: 65 NVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTW 124 Query: 427 ISTKRQPLGPKPGFMV--EGTTIETVTPIPYD 516 + KR P+ V G E + PIPY+ Sbjct: 125 VQLKRHAAPPREAHFVRTNGKEPELLEPIPYE 156
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 140 bits (352), Expect = 4e-33 Identities = 70/155 (45%), Positives = 102/155 (65%), Gaps = 3/155 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 GLR TR +FAR FRK G L+TY YK G+ VD+K NGA KGMP K YHGRTGR++ Sbjct: 5 GLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGMPFKAYHGRTGRIF 64 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGE- 423 NVT+ A+G+ +NK+V I+ KRI++R+EH++PS+C +F R ND+ + AK+ G+ Sbjct: 65 NVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQP 124 Query: 424 VISTKRQPLGPKPGFMV--EGTTIETVTPIPYDVV 522 V + KR P+ P+ V + E + P+ +++V Sbjct: 125 VPALKRLPVAPRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 139 bits (351), Expect = 6e-33 Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 9/164 (5%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 MP +G RTR LF RPFR G +T L TYKVG+YV + N ++ G+P+K +HG+ Sbjct: 1 MPLSNGRNRRTRKLFKRPFRGHGLSNTSTILHTYKVGDYVTILCNSSIQHGLPYKAFHGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKV-------KND 390 TGRVWNV AIGV +NK+V NRI+ KR+H+ EH++PS C ++F RK +N Sbjct: 61 TGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNI 120 Query: 391 QLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIE--TVTPIPYD 516 QLK E K + KR P P+P +++G I+ TV P+ ++ Sbjct: 121 QLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 137 bits (344), Expect = 4e-32 Identities = 67/147 (45%), Positives = 99/147 (67%), Gaps = 1/147 (0%) Frame = +1 Query: 79 RTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVWNVTK 258 R D+F++ FR++G IPL YL YK G+ VD+K +G+V K PHK YHG+TGR++NVT+ Sbjct: 8 RGSDMFSKKFRERGAIPLNKYLTVYKKGDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQ 67 Query: 259 RAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTK 438 A+G+ +NKQV RII KRI+VR+EH++ S+ F R +N++ + EA+ + ++ K Sbjct: 68 HAVGIIVNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLK 127 Query: 439 RQPLGPKPGFMVEGTT-IETVTPIPYD 516 RQP P+ G V + E V PIPY+ Sbjct: 128 RQPQQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 117 bits (292), Expect = 4e-26 Identities = 58/132 (43%), Positives = 92/132 (69%), Gaps = 1/132 (0%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G R TR LF++ RK G ++ YL Y++G+ VD+ VN A+ KGMPHK+YHGRTGRV+ Sbjct: 5 GYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVY 64 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEV 426 +V R++ V + K+V + + K+I VR+EHV+ SRC+EE + R + ++ +A++RG V Sbjct: 65 DVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVV 124 Query: 427 IS-TKRQPLGPK 459 ++ +KR+ GP+ Sbjct: 125 LAPSKRKIEGPR 136
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 78.2 bits (191), Expect = 2e-14 Identities = 34/57 (59%), Positives = 42/57 (73%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTG 237 G R TR +F+RPFRK G +PL TY+R YK G+ VD+K G V KG+PHK YHG+TG Sbjct: 5 GKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 74.7 bits (182), Expect = 2e-13 Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 G RS+TR L + R+KG IP L+ + Y GEYV VK+N ++HKGMPH+ YHG+ G V Sbjct: 7 GYRSKTRKLLEKKVREKGAIPKLSLLMHDYSQGEYVVVKINPSIHKGMPHRRYHGKVGLV 66 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 345 V KR E+ +G++ + + VR EH+ P Sbjct: 67 --VGKRGKAYEVKVNIGDK--ERVLIVRPEHLIP 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 70.1 bits (170), Expect = 6e-12 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 2/106 (1%) Frame = +1 Query: 58 AGHGLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHK-GMPHKFYHGR 231 A G R+RTR L +P R+KG IP L+TYLR Y+VG+ V + +N + GMPH+ +HG Sbjct: 4 APRGYRNRTRRLLRKPVREKGSIPRLSTYLREYRVGDKVAIIINPSFPDWGMPHRRFHGL 63 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAEEFR 369 TG V V KR E+ +G + RK + V H++P A E R Sbjct: 64 TGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVHLKPLSTAAERR 105
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 66.2 bits (160), Expect = 8e-11 Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 1/92 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 G R+RTR L + R++G +P L+ + +K G+YV +K+N +VHKGMPH+ YHG+ G + Sbjct: 7 GYRTRTRKLLTKNVRERGAVPRLSLLMEEFKEGDYVVIKINPSVHKGMPHRRYHGKVGVI 66 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHV 339 KR + +G++ K I VR EH+ Sbjct: 67 QG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 65.9 bits (159), Expect = 1e-10 Identities = 36/94 (38%), Positives = 56/94 (59%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G R +TR ++ R++G P+T LR +K GEYV + ++ +VHKGMPH +HGRTG V Sbjct: 7 GFRRKTRKKLSKHPRERGLYPITRALREFKEGEYVHIVIDPSVHKGMPHPRFHGRTGIVV 66 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPS 348 RA V++ G + K+I +H++P+ Sbjct: 67 GKQGRAFIVKVRD--GGKY--KQIIAYPQHLRPA 96
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 62.0 bits (149), Expect = 2e-09 Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 1/94 (1%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIP-LTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 G R+R+R L + R++G +P L+ + YK G+ V VK+N +VH+GMPH+ Y G+ G++ Sbjct: 7 GYRTRSRSLLRKSPRERGAVPSLSKLMVEYKEGDNVVVKINPSVHQGMPHRRYQGKVGKI 66 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 345 + KR ++ +G++ K I VR EH+ P Sbjct: 67 --IGKRGRAYLVSVTLGDK--EKVIIVRPEHLVP 96
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 62.0 bits (149), Expect = 2e-09 Identities = 37/98 (37%), Positives = 54/98 (55%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G RSRTR + R++G PL + ++ G+ V + ++ +VHKGMPH YHGRTG V Sbjct: 7 GFRSRTRKKLRKKPRERGLSPLGPMTQEFEEGQKVHIVIDPSVHKGMPHPRYHGRTGEVV 66 Query: 247 NVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSRCAE 360 RA V+I G + K++ V EH++P E Sbjct: 67 GRQGRAYIVKIRD--GGK--EKKLIVYPEHLKPQEQPE 100
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 60.8 bits (146), Expect = 3e-09 Identities = 32/96 (33%), Positives = 53/96 (55%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 H R +TR + R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 60.8 bits (146), Expect = 3e-09 Identities = 32/96 (33%), Positives = 53/96 (55%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 H R +TR + R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLRKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 V KR + GN++ K + + H++P + Sbjct: 66 --VGKRGDAYIVEVPDGNKV--KTLFIHPVHLRPQK 97
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 60.1 bits (144), Expect = 6e-09 Identities = 31/96 (32%), Positives = 55/96 (57%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 H R +TR ++ R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRKKLSKHPRRRGLPPLTRFLQEFEVGQRVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 V KR + + G+++ K + + H++P + Sbjct: 66 --VGKRGEAYIVEIKDGSKV--KTLFIHPVHLRPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 58.5 bits (140), Expect = 2e-08 Identities = 36/100 (36%), Positives = 54/100 (54%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 M G RS+TR + R+KG PLT L+ Y G+ V V ++ +V KGMPH +HG+ Sbjct: 1 MQKSEGFRSKTRYKLQKHPRQKGMAPLTRALKCYTEGDLVHVVLDPSVQKGMPHPKFHGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 TG V V +R + + G + K I R +H++ S+ Sbjct: 61 TGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHLRESK 96
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 58.2 bits (139), Expect = 2e-08 Identities = 31/96 (32%), Positives = 52/96 (54%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 H R +TR ++ R++G PLT +L+ ++VG+ V + + + HKGMP +HGRTG V Sbjct: 6 HSFRRKTRGKLSKHPRRRGLPPLTRFLQEFEVGQKVHIVIEPSYHKGMPDPRFHGRTGTV 65 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 V KR + G ++ K + H++P + Sbjct: 66 --VGKRGDAYIVQITDGGKV--KTFFIHPVHLRPQK 97
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 54.7 bits (130), Expect = 2e-07 Identities = 30/97 (30%), Positives = 54/97 (55%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 M G RS+TR + R P+T ++++ G+ V + ++ ++H+G PH +HG+ Sbjct: 1 MRRSRGFRSKTRHKLQKVKRPGRSNPITRKIQSFNEGDLVHIIIDPSIHRGQPHPRFHGK 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 342 TGRV + ++ V + GN+ K++ VR EH+Q Sbjct: 61 TGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHLQ 93
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 52.4 bits (124), Expect = 1e-06 Identities = 32/94 (34%), Positives = 52/94 (55%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 HG R ++ + R+KG + + +L+T+ VG+ V + + A KGMPH + GRTG V Sbjct: 6 HGFRFKSGRKLRKKVREKG-VRIRKFLQTFDVGQRVHIDIEPASQKGMPHPRFQGRTGVV 64 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 345 RA V++ G ++ K + VR EH++P Sbjct: 65 IGQRGRAYLVQVRD--GGKM--KTLIVRPEHLKP 94
>RL21_PYRAE (Q8ZTB5) 50S ribosomal protein L21e| Length = 100 Score = 49.7 bits (117), Expect = 8e-06 Identities = 31/94 (32%), Positives = 49/94 (52%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 HG R +TR L + R+KG L+ L YKVG+ V + ++ PH+ Y G+ G V Sbjct: 6 HGYRYKTRKLLRKKPREKGLSGLSRLLYEYKVGDKVIIDIDSTFISTAPHRRYQGKVGTV 65 Query: 244 WNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQP 345 + RA +E +G++ +K I EH++P Sbjct: 66 VGIRGRAYVIE--TFLGDK--KKIIITTPEHLKP 95
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 47.4 bits (111), Expect = 4e-05 Identities = 26/100 (26%), Positives = 53/100 (53%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 M HG + TR + R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGEKRCTRYKLQKTVRERGISPVSRAIQEFEEGQMVHIDIDPSVQKGMPNPKFQGS 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 TG+V R+ +E+ GN + K + +H++P + Sbjct: 61 TGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHLKPQK 96
>RL21_NANEQ (Q74N21) 50S ribosomal protein L21e| Length = 98 Score = 46.6 bits (109), Expect = 7e-05 Identities = 28/94 (29%), Positives = 47/94 (50%) Frame = +1 Query: 61 GHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGR 240 G G R +TRD ++ R++G + +T L+ + + V + + + H GMPH YHG G Sbjct: 6 GKGFRRKTRDKLSKHPRQRGKLTITRILQKFNNNDKVAIVIEPSWHYGMPHPRYHGLVGT 65 Query: 241 VWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQ 342 V V KR E+ + +K + V H++ Sbjct: 66 V--VGKRGNCYEVELEFNGE--KKLLIVHPAHLK 95
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 44.7 bits (104), Expect = 3e-04 Identities = 26/100 (26%), Positives = 53/100 (53%) Frame = +1 Query: 52 MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGR 231 M HG R TR + R++G P++ ++ ++ G+ V + ++ +V KGMP+ + G Sbjct: 1 MTNSHGERRCTRYKLQKTVRERGISPVSKAIQEFEDGQMVHIDIDPSVQKGMPNPKFQGF 60 Query: 232 TGRVWNVTKRAIGVEINKQVGNRIIRKRIHVRVEHVQPSR 351 TG+V + +R + + GN + K + +H++P + Sbjct: 61 TGKV--IGQRGRSYILAVREGNSM--KEVFSVPQHLKPQK 96
>RL21_XENLA (P49628) 60S ribosomal protein L21 (Fragment)| Length = 33 Score = 44.3 bits (103), Expect = 3e-04 Identities = 18/32 (56%), Positives = 24/32 (75%) Frame = +1 Query: 100 RPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAV 195 RPFRK G +PL+TY+R YK G+ VD+K G + Sbjct: 1 RPFRKHGAVPLSTYMRIYKKGDIVDIKGMGTI 32
>RL21_PICTO (Q6L228) 50S ribosomal protein L21e| Length = 97 Score = 43.1 bits (100), Expect = 7e-04 Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 3/90 (3%) Frame = +1 Query: 67 GLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW 246 G RS +R + + + KG + ++T++VG+ + +N AV GMPH + G TG + Sbjct: 7 GPRSGSRRVMTKSVKNKGMPKVNEMMKTFEVGDRAAIVINSAVPDGMPHHDFQGITGVIT 66 Query: 247 NVTKRAIGVEINKQVGN---RIIRKRIHVR 327 + + ++ +VGN ++I +H+R Sbjct: 67 GM--QGSCYILSFKVGNVEKKVIAAPVHLR 94
>TAU_MOUSE (P10637) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 732 Score = 35.0 bits (79), Expect = 0.20 Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -2 Query: 117 LLPEGAREQVARP---RPQTMARRHPAPPALFRVAAAREGW 4 LLP+G RE +P RP+ + + HPA L R +EGW Sbjct: 140 LLPQGLREATCQPSGTRPEDIEKSHPASELLRRGPPQKEGW 180
>RL21_THEAC (Q9HIN8) 50S ribosomal protein L21e| Length = 98 Score = 34.7 bits (78), Expect = 0.26 Identities = 16/60 (26%), Positives = 32/60 (53%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 HG RS +R + ++ + +++ ++ G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSAEERKRSVIGRFMQEFEPGDRVAIDIEPSVHAGMPYHRFQGYTGVV 65
>RL21_THEVO (Q97BZ1) 50S ribosomal protein L21e| Length = 98 Score = 32.7 bits (73), Expect = 0.99 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 2/90 (2%) Frame = +1 Query: 64 HGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRV 243 HG RS +R + ++ + ++ + G+ V + + +VH GMP+ + G TG V Sbjct: 6 HGPRSGSRRKLTKSKEERKKSIIGRMMQEFSPGDRVAIDIEPSVHNGMPYHRFQGYTGIV 65 Query: 244 WNVTKRA--IGVEINKQVGNRIIRKRIHVR 327 +GV++ + +I +H++ Sbjct: 66 EGAQGNCYKVGVKVG-SLTKYVIASPVHLK 94
>TAU_RAT (P19332) Microtubule-associated protein tau (Neurofibrillary tangle| protein) (Paired helical filament-tau) (PHF-tau) Length = 751 Score = 31.6 bits (70), Expect = 2.2 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = -2 Query: 117 LLPEGAREQVARP---RPQTMARRHPAPPALFRVAAAREGW 4 L P+G RE +P RP+ + R HPA L++ + +E W Sbjct: 156 LPPQGLREATHQPLGTRPEDVERSHPASELLWQESPQKEAW 196
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 31.2 bits (69), Expect = 2.9 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +1 Query: 295 NRIIRKRIHVRVEHVQPSRCAEEFRLR 375 NRI +RIH+ +H Q ++C E FR R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>AMD_RAT (P14925) Peptidyl-glycine alpha-amidating monooxygenase precursor (EC| 1.14.17.3) (PAM) Length = 976 Score = 30.8 bits (68), Expect = 3.7 Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 3/131 (2%) Frame = +1 Query: 127 PLTTYLRTYKVGEYVDVKVNGAVHKGMPHKFYHGRTGRVW---NVTKRAIGVEINKQVGN 297 P+ ++ + GE +DV H MPH G V+ T + +++ + Sbjct: 758 PVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEKMEH 817 Query: 298 RIIRKRIHVRVEHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVE 477 R + K+ + V+ ++ + E KV+N +E + E +Q L +PG V Sbjct: 818 RSV-KKAGIEVQEIKEAEAVVE---PKVENKPTSSELQKMQE-----KQKLSTEPGSGVS 868 Query: 478 GTTIETVTPIP 510 I T+ IP Sbjct: 869 VVLITTLLVIP 879
>VP40_EHV2 (P52369) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein] Length = 643 Score = 30.4 bits (67), Expect = 4.9 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = -2 Query: 114 LPEGAREQVARPRPQTMARRHPAPP-ALFRVAAAREGWF 1 LP+ + A+P+PQ + +PAPP A + AA +G++ Sbjct: 491 LPQPQLQPQAQPQPQPAPQLYPAPPQAFYHPAAGDQGYY 529
>COPB2_CAEEL (Q20168) Probable coatomer subunit beta' (Beta'-coat protein)| (Beta'-COP) Length = 1000 Score = 30.0 bits (66), Expect = 6.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +3 Query: 3 TTLLSPPPPETKQEEQDAGGPWSAVADARPVRAPLPEE 116 T L +PPPP ++ P S + + P+R P PEE Sbjct: 868 TQLKAPPPPSVARQPSPVRQP-SPIREPSPIREPEPEE 904
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 30.0 bits (66), Expect = 6.4 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = -2 Query: 135 GERDVTLLPEGAREQVARPRPQTMARRHPAPPALFRVAAARE 10 GER+ LLP G+R+Q ++ +P+ + P R AA+ E Sbjct: 623 GEREPGLLPYGSRDQTSKDKPKVKTKGRP------RAAASNE 658
>KIF1C_HUMAN (O43896) Kinesin-like protein KIF1C| Length = 1103 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +2 Query: 434 PRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVV 541 P GS +A R+P +RP P L W +SR++ Sbjct: 893 PEGSEAAEEAAPSDRMPSARPPSPPLSSWERVSRLM 928
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.0 bits (66), Expect = 6.4 Identities = 28/124 (22%), Positives = 46/124 (37%) Frame = +2 Query: 212 TSSTTAAPDACGXXXXXXXXXXXXXXLETASSGKGSMSVLSMCSHPGVLRSSA*GK*RMT 391 +++TT +P + ++SS S S S S SS Sbjct: 148 STTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------- 199 Query: 392 SSRRKPRHVVRSSAPRGSHSALNPGSWSRVPQSRPSLPFLMMWSMISRVVTRVFGLSACT 571 SS V +S+ SHS+ + S S SRPS + +M S ++ + Sbjct: 200 SSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSSTFISTVTVTPSS 259 Query: 572 TSSN 583 +SS+ Sbjct: 260 SSSS 263
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = +1 Query: 331 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 510 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 511 YDVVNDLKGGY 543 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = +1 Query: 331 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 510 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 511 YDVVNDLKGGY 543 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/71 (23%), Positives = 29/71 (40%) Frame = +1 Query: 331 EHVQPSRCAEEFRLRKVKNDQLKAEAKARGEVISTKRQPLGPKPGFMVEGTTIETVTPIP 510 + V P R + ++ + D ++ T + L P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 511 YDVVNDLKGGY 543 V+NDL Y Sbjct: 195 SLVINDLIYAY 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 93,984,301 Number of Sequences: 219361 Number of extensions: 1980568 Number of successful extensions: 6769 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 6294 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6749 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
