| Clone Name | basd14o18 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK072911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150D09, full insert sequence Length = 835 Score = 381 bits (192), Expect = e-102 Identities = 369/426 (86%), Gaps = 4/426 (0%) Strand = Plus / Plus Query: 111 tcaccgcctccacccagcagaaca---ccgccggcaccgccatcgacctctccaacgacg 167 ||||| || ||||||||||||||| || || |||| |||||||||||||| ||||| Sbjct: 188 tcaccaccaccacccagcagaacagcgcctccaccaccaccatcgacctctcctccgacg 247 Query: 168 agagccgccgccgcctcgtcaacagtctgatgtacaggagcaagcagaggggcttcctgg 227 ||||||||||||||||| ||||||| ||| ||||||||||||||||| |||| ||| ||| Sbjct: 248 agagccgccgccgcctcatcaacaggctggtgtacaggagcaagcagcgggg-ttcttgg 306 Query: 228 agctggacctggtgctcgggacctgggtggagcagcacgtccgctccatggacgaggcca 287 |||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| Sbjct: 307 agctggacctggtgctcgggacctgggtcgagcagcacatccactccatggacgaggcca 366 Query: 288 acatccgctccctgctccagatcctcgacctcgagaacccagatttgtggaaatggctta 347 |||||||| |||||||||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 367 acatccgcgccctgctccaagtcctcgacctcgaaaacccagatttgtggaagtggctta 426 Query: 348 ctggtcaagagcaaccaccagagactgtaaactctaatcctgtatttgctgccattaagt 407 || ||| || |||||||| ||| | || |||||||||||||||||| || |||| | Sbjct: 427 ctagtcgggaacaaccacccgaggcagtgaactctaatcctgtatttatcgctgttaaat 486 Query: 408 cgaaggtgacggataacctgagcaagcactcttccccagagacccggtcagcgcctggtc 467 ||||||| ||||| |||||||||||||||||||| || | |||| | ||||| ||||||| Sbjct: 487 cgaaggtcacggacaacctgagcaagcactcttctcctgggaccagatcagcacctggtc 546 Query: 468 agccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtacggaaacc 527 |||| |||||||||||||||||||||||| | || |||| || || ||||| ||||| | Sbjct: 547 agccatgggtgagagggtgggatgacaagcgaggcattgaagggccaaagtatggaaatc 606 Query: 528 agtgat 533 |||||| Sbjct: 607 agtgat 612
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08, complete sequence Length = 165440 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 198 tgtacaggagcaagcagaggggcttcctggagctggacctggtgctcgggacctgggtgg 257 ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| | Sbjct: 86667 tgtacaggagcaagcagcgggggttcttggagctggacctggtgctcgggacctgggtcg 86726 Query: 258 agcagcacgtccgctccatggacgaggccaacatccgctccctgctccagatcctcgacc 317 |||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 86727 agcagcacatccactccatggacgaggccaacatccgcgccctgctccaagtcctcgacc 86786 Query: 318 tcg 320 ||| Sbjct: 86787 tcg 86789 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 402 ttaagtcgaaggtgacggataacctgagcaagcactcttccccagagacccggtcagcgc 461 |||| |||||||| ||||| |||||||||||||||||||| || |||||| | ||||| | Sbjct: 87948 ttaaatcgaaggtcacggacaacctgagcaagcactcttctcctgagaccagatcagcac 88007 Query: 462 ctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtacg 521 |||||||||| |||||||||||||||||||||||| | || |||| ||||| ||||| | Sbjct: 88008 ctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaaggaccaaagtatg 88067 Query: 522 gaaaccagtgat 533 |||| ||||||| Sbjct: 88068 gaaatcagtgat 88079 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 323 aacccagatttgtggaaatggcttactggtcaagagcaaccaccagagactgtaaactct 382 ||||||||||||||||| ||||||||| |||| || |||||||| ||| | || |||||| Sbjct: 87781 aacccagatttgtggaagtggcttactagtcaggaacaaccacccgaggcagtgaactct 87840 Query: 383 aatcctgtat 392 |||||||||| Sbjct: 87841 aatcctgtat 87850 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/85 (85%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 111 tcaccgcctccacccagcagaaca---ccgccggcaccgccatcgacctctccaacgacg 167 ||||| || ||||||||||||||| || || |||| |||||||||||||| ||||| Sbjct: 86474 tcaccaccaccacccagcagaacagcgcctccaccaccaccatcgacctctcctccgacg 86533 Query: 168 agagccgccgccgcctcgtcaacag 192 ||||||||||||||||| ||||||| Sbjct: 86534 agagccgccgccgcctcatcaacag 86558
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 198 tgtacaggagcaagcagaggggcttcctggagctggacctggtgctcgggacctgggtgg 257 ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| | Sbjct: 18507352 tgtacaggagcaagcagcgggggttcttggagctggacctggtgctcgggacctgggtcg 18507411 Query: 258 agcagcacgtccgctccatggacgaggccaacatccgctccctgctccagatcctcgacc 317 |||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 18507412 agcagcacatccactccatggacgaggccaacatccgcgccctgctccaagtcctcgacc 18507471 Query: 318 tcg 320 ||| Sbjct: 18507472 tcg 18507474 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 402 ttaagtcgaaggtgacggataacctgagcaagcactcttccccagagacccggtcagcgc 461 |||| |||||||| ||||| |||||||||||||||||||| || |||||| | ||||| | Sbjct: 18508633 ttaaatcgaaggtcacggacaacctgagcaagcactcttctcctgagaccagatcagcac 18508692 Query: 462 ctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtacg 521 |||||||||| |||||||||||||||||||||||| | || |||| ||||| ||||| | Sbjct: 18508693 ctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaaggaccaaagtatg 18508752 Query: 522 gaaaccagtgat 533 |||| ||||||| Sbjct: 18508753 gaaatcagtgat 18508764 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 323 aacccagatttgtggaaatggcttactggtcaagagcaaccaccagagactgtaaactct 382 ||||||||||||||||| ||||||||| |||| || |||||||| ||| | || |||||| Sbjct: 18508466 aacccagatttgtggaagtggcttactagtcaggaacaaccacccgaggcagtgaactct 18508525 Query: 383 aatcctgtat 392 |||||||||| Sbjct: 18508526 aatcctgtat 18508535 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/85 (85%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 111 tcaccgcctccacccagcagaaca---ccgccggcaccgccatcgacctctccaacgacg 167 ||||| || ||||||||||||||| || || |||| |||||||||||||| ||||| Sbjct: 18507159 tcaccaccaccacccagcagaacagcgcctccaccaccaccatcgacctctcctccgacg 18507218 Query: 168 agagccgccgccgcctcgtcaacag 192 ||||||||||||||||| ||||||| Sbjct: 18507219 agagccgccgccgcctcatcaacag 18507243
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 172 bits (87), Expect = 8e-40 Identities = 114/123 (92%) Strand = Plus / Plus Query: 198 tgtacaggagcaagcagaggggcttcctggagctggacctggtgctcgggacctgggtgg 257 ||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| | Sbjct: 18666753 tgtacaggagcaagcagcgggggttcttggagctggacctggtgctcgggacctgggtcg 18666812 Query: 258 agcagcacgtccgctccatggacgaggccaacatccgctccctgctccagatcctcgacc 317 |||||||| ||| ||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 18666813 agcagcacatccactccatggacgaggccaacatccgcgccctgctccaagtcctcgacc 18666872 Query: 318 tcg 320 ||| Sbjct: 18666873 tcg 18666875 Score = 127 bits (64), Expect = 4e-26 Identities = 115/132 (87%) Strand = Plus / Plus Query: 402 ttaagtcgaaggtgacggataacctgagcaagcactcttccccagagacccggtcagcgc 461 |||| |||||||| ||||| |||||||||||||||||||| || |||||| | ||||| | Sbjct: 18668034 ttaaatcgaaggtcacggacaacctgagcaagcactcttctcctgagaccagatcagcac 18668093 Query: 462 ctggtcagccttgggtgagagggtgggatgacaagaggggtcttgatggacccaagtacg 521 |||||||||| |||||||||||||||||||||||| | || |||| ||||| ||||| | Sbjct: 18668094 ctggtcagccatgggtgagagggtgggatgacaagcgaggcattgaaggaccaaagtatg 18668153 Query: 522 gaaaccagtgat 533 |||| ||||||| Sbjct: 18668154 gaaatcagtgat 18668165 Score = 75.8 bits (38), Expect = 1e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 323 aacccagatttgtggaaatggcttactggtcaagagcaaccaccagagactgtaaactct 382 ||||||||||||||||| ||||||||| |||| || |||||||| ||| | || |||||| Sbjct: 18667867 aacccagatttgtggaagtggcttactagtcaggaacaaccacccgaggcagtgaactct 18667926 Query: 383 aatcctgtat 392 |||||||||| Sbjct: 18667927 aatcctgtat 18667936 Score = 69.9 bits (35), Expect = 9e-09 Identities = 73/85 (85%), Gaps = 3/85 (3%) Strand = Plus / Plus Query: 111 tcaccgcctccacccagcagaaca---ccgccggcaccgccatcgacctctccaacgacg 167 ||||| || ||||||||||||||| || || |||| |||||||||||||| ||||| Sbjct: 18666560 tcaccaccaccacccagcagaacagcgcctccaccaccaccatcgacctctcctccgacg 18666619 Query: 168 agagccgccgccgcctcgtcaacag 192 ||||||||||||||||| ||||||| Sbjct: 18666620 agagccgccgccgcctcatcaacag 18666644
>dbj|AK071796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114I06, full insert sequence Length = 1132 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 142 caccgccatcgacctctccaacgacgagagccgccgccgcctcgtcaacagtctgatgta 201 |||| |||||||||||||| ||||||||||||||| |||||| ||||||| ||| | || Sbjct: 292 caccaccatcgacctctcctccgacgagagccgccgtcgcctcatcaacaggctgcttta 351 Query: 202 caggagcaagcagaggggcttcctggagctgg 233 ||||||||||||| |||| ||| ||||||||| Sbjct: 352 caggagcaagcagcgggggttcttggagctgg 383
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 142 caccgccatcgacctctccaacgacgagagccgccgccgcctcgtcaacag 192 |||| |||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 13417023 caccaccatcgacctctcctccgacgagagccgccgtcgcctcatcaacag 13417073 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 200 tacaggagcaagcagaggggcttcctggagctgg 233 ||||||||||||||| |||| ||| ||||||||| Sbjct: 13417189 tacaggagcaagcagcgggggttcttggagctgg 13417222 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cccgtcgccagcttcctcgcgcgc 75 ||||||||||| |||||||||||| Sbjct: 21033336 cccgtcgccaggttcctcgcgcgc 21033313
>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0025E03 Length = 156806 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 142 caccgccatcgacctctccaacgacgagagccgccgccgcctcgtcaacag 192 |||| |||||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 88367 caccaccatcgacctctcctccgacgagagccgccgtcgcctcatcaacag 88417 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 200 tacaggagcaagcagaggggcttcctggagctgg 233 ||||||||||||||| |||| ||| ||||||||| Sbjct: 88533 tacaggagcaagcagcgggggttcttggagctgg 88566
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 147 ccatcgacctctccaacgacgagagccgccgccgc 181 |||||||||||||| ||||||||||||||||||| Sbjct: 2057 ccatcgacctctccttcgacgagagccgccgccgc 2023 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 198 tgtacaggagcaagcagaggggcttcctggagctgg 233 ||||||||||||||||| |||| ||| ||||||||| Sbjct: 1933 tgtacaggagcaagcagcgggggttcttggagctgg 1898
>emb|AL662990.3|OSJN00194 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015C06, complete sequence Length = 147676 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 147 ccatcgacctctccaacgacgagagccgccgccgc 181 |||||||||||||| ||||||||||||||||||| Sbjct: 138191 ccatcgacctctccttcgacgagagccgccgccgc 138157 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 198 tgtacaggagcaagcagaggggcttcctggagctgg 233 ||||||||||||||||| |||| ||| ||||||||| Sbjct: 138067 tgtacaggagcaagcagcgggggttcttggagctgg 138032
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 147 ccatcgacctctccaacgacgagagccgccgccgc 181 |||||||||||||| ||||||||||||||||||| Sbjct: 5025784 ccatcgacctctccttcgacgagagccgccgccgc 5025750 Score = 48.1 bits (24), Expect = 0.032 Identities = 33/36 (91%) Strand = Plus / Minus Query: 198 tgtacaggagcaagcagaggggcttcctggagctgg 233 ||||||||||||||||| |||| ||| ||||||||| Sbjct: 5025660 tgtacaggagcaagcagcgggggttcttggagctgg 5025625
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 131 aacaccgccggcaccgccatcgacctctccaacgacgagagccgccgcc 179 ||||||||| |||| |||||||||||||| ||| ||||||||||||| Sbjct: 7029280 aacaccgccaccaccaccatcgacctctcctccgaagagagccgccgcc 7029328 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 cgctcctccgccgggcgctccagctccgccgcg 47 ||||||||||||| |||||||| |||||||||| Sbjct: 7029145 cgctcctccgccgtgcgctccacctccgccgcg 7029177 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 15 cgctcctccgccgggcgctccagctccgccgcg 47 ||||||||||||| |||||||| |||| ||||| Sbjct: 26050142 cgctcctccgccgtgcgctccacctccaccgcg 26050110 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 1455533 ctggagctggacctggtgct 1455552
>dbj|AP005170.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0080E19 Length = 152755 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 131 aacaccgccggcaccgccatcgacctctccaacgacgagagccgccgcc 179 ||||||||| |||| |||||||||||||| ||| ||||||||||||| Sbjct: 50067 aacaccgccaccaccaccatcgacctctcctccgaagagagccgccgcc 50115 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 cgctcctccgccgggcgctccagctccgccgcg 47 ||||||||||||| |||||||| |||||||||| Sbjct: 49932 cgctcctccgccgtgcgctccacctccgccgcg 49964
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Plus Query: 131 aacaccgccggcaccgccatcgacctctccaacgacgagagccgccgcc 179 ||||||||| |||| |||||||||||||| ||| ||||||||||||| Sbjct: 88707 aacaccgccaccaccaccatcgacctctcctccgaagagagccgccgcc 88755 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 15 cgctcctccgccgggcgctccagctccgccgcg 47 ||||||||||||| |||||||| |||||||||| Sbjct: 88572 cgctcctccgccgtgcgctccacctccgccgcg 88604
>gb|AE008985.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 11 of 256 of the complete sequence Length = 10104 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 15 cgctcctccgccgggcgctccagctccgcc 44 ||||||||| || ||||||||||||||||| Sbjct: 6691 cgctcctccacccggcgctccagctccgcc 6662
>emb|AL353649.12| Human DNA sequence from clone RP11-30P16 on chromosome 9, complete sequence Length = 64791 Score = 44.1 bits (22), Expect = 0.50 Identities = 25/26 (96%) Strand = Plus / Plus Query: 545 aaccattattgcagtcttaaaaataa 570 ||||||||||||||||||| |||||| Sbjct: 24018 aaccattattgcagtcttagaaataa 24043
>gb|AC005383.2| Homo sapiens chromosome 10 clone CIT987SK-1144G6 map 10q25.1, complete sequence Length = 121774 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 caggagcaagcagaggggcttc 223 |||||||||||||||||||||| Sbjct: 75870 caggagcaagcagaggggcttc 75849
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 15 cgctcctccgccgggcgctccagctccgcc 44 ||||||||| || ||||||||||||||||| Sbjct: 118377 cgctcctccacccggcgctccagctccgcc 118348
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 202 caggagcaagcagaggggcttcctggagct 231 ||||||||||| ||||| |||||||||||| Sbjct: 667178 caggagcaagccgagggacttcctggagct 667149
>gb|AY572973.1| Homo sapiens colon cancer secreted protein-2 (CCSP-2) gene, complete cds Length = 52487 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 caggagcaagcagaggggcttc 223 |||||||||||||||||||||| Sbjct: 49443 caggagcaagcagaggggcttc 49422
>ref|XM_483284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1376 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 501 tcctccacccgcctcctctcc 481
>gb|U23512.1| Caenorhabditis elegans cosmid M01G4, complete sequence Length = 38415 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 atttgtggaaatggcttactg 350 ||||||||||||||||||||| Sbjct: 4012 atttgtggaaatggcttactg 4032
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 244 cgggacctgggtggagcagcacgtc 268 |||||||||||||||| |||||||| Sbjct: 873599 cgggacctgggtggaggagcacgtc 873623
>gb|AC124764.3| Mus musculus BAC clone RP23-166K1 from chromosome 18, complete sequence Length = 209579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gaaatggcttactggtcaaga 357 ||||||||||||||||||||| Sbjct: 111248 gaaatggcttactggtcaaga 111268
>ref|XM_850155.1| PREDICTED: Canis familiaris similar to MRG-binding protein (LOC612425), mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 215 aggggcttcctggagctggac 235 ||||||||||||||||||||| Sbjct: 44 aggggcttcctggagctggac 24
>ref|XM_388941.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08765.1) partial mRNA Length = 453 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 cttcctggagctggacctggtgctc 244 ||||| ||||||||||||||||||| Sbjct: 121 cttcccggagctggacctggtgctc 145
>gb|AC124451.4| Mus musculus BAC clone RP24-218I3 from chromosome 9, complete sequence Length = 168315 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 214 gaggggcttcctggagctggacctg 238 ||||||||||||||||||| ||||| Sbjct: 119645 gaggggcttcctggagctgcacctg 119669
>emb|X01681.1|MMCY02 M.musculus CYP1A1 gene Length = 6214 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 aagcagaggggcttcctggag 229 ||||||||||||||||||||| Sbjct: 739 aagcagaggggcttcctggag 719
>gb|AC162297.5| Mus musculus chromosome 18, clone RP24-276H6, complete sequence Length = 190293 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 337 gaaatggcttactggtcaaga 357 ||||||||||||||||||||| Sbjct: 4868 gaaatggcttactggtcaaga 4888
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 cgagagccgccgccgcctcgt 186 ||||||||||||||||||||| Sbjct: 191639 cgagagccgccgccgcctcgt 191619
>dbj|AB208398.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR64 Length = 393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>dbj|AB208391.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR42 Length = 393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>dbj|AB208381.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR25 Length = 393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>dbj|AB208380.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR24 Length = 393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>dbj|AB208379.1| Uncultured nitrogen-fixing bacterium mRNA for dinitrogenase reductase, partial cds, clone: NE5L-ROR22 Length = 393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>gb|BC098009.1| Rattus norvegicus cDNA clone IMAGE:7454199, containing frame-shift errors Length = 2062 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ggcccgctcctccgccgggcgctcc 35 |||||||||||||||| |||||||| Sbjct: 245 ggcccgctcctccgccaggcgctcc 221
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 18759665 tcctccacccgcctcctctcc 18759645
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 25263314 tcctccacccgcctcctctcc 25263294
>ref|XM_394491.2| PREDICTED: Apis mellifera similar to GA13060-PA (LOC411018), mRNA Length = 5919 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 gctccagatcctcgacctcga 321 ||||||||||||||||||||| Sbjct: 4318 gctccagatcctcgacctcga 4298
>dbj|AB184960.1| Uncultured bacterium nifH gene for dinitrogenase reductase, partial cds, clone:N5-R17B Length = 390 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>dbj|AB184959.1| Uncultured bacterium nifH gene for dinitrogenase reductase, partial cds, clone:N5-R5B Length = 393 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 29 ccacccagcagaacaccgccg 49
>ref|XM_214673.3| PREDICTED: Rattus norvegicus component of oligomeric golgi complex 8 (predicted) (Cog8_predicted), mRNA Length = 2670 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 11 ggcccgctcctccgccgggcgctcc 35 |||||||||||||||| |||||||| Sbjct: 237 ggcccgctcctccgccaggcgctcc 213
>dbj|AP004008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1226_A12 Length = 113025 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 15 cgctcctccgccgggcgctccagctccgccgcg 47 ||||||||||||| |||||||| |||| ||||| Sbjct: 88000 cgctcctccgccgtgcgctccacctccaccgcg 87968
>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02 Length = 151636 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 15 cgctcctccgccgggcgctccagctccgccgcg 47 ||||||||||||| |||||||| |||| ||||| Sbjct: 29387 cgctcctccgccgtgcgctccacctccaccgcg 29355
>gb|AC100956.9| Mus musculus chromosome 7, clone RP23-74B10, complete sequence Length = 245367 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 ggaaatggcttactggtcaagagca 360 |||||||||| |||||||||||||| Sbjct: 134754 ggaaatggctcactggtcaagagca 134778
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 128437 tcctccacccgcctcctctcc 128417
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 38499 tcctccacccgcctcctctcc 38479
>dbj|AK068450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151M13, full insert sequence Length = 1376 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 501 tcctccacccgcctcctctcc 481
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 18685892 tcctccacccgcctcctctcc 18685872
>emb|AL954153.6|CNS08CCR Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0060B11 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109192 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tcctccacccgcctcctctcc 109 ||||||||||||||||||||| Sbjct: 59937 tcctccacccgcctcctctcc 59957
>gb|AC122515.5| Mus musculus BAC clone RP24-455N18 from 9, complete sequence Length = 164271 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 209 aagcagaggggcttcctggag 229 ||||||||||||||||||||| Sbjct: 84366 aagcagaggggcttcctggag 84386
>gb|M33935.1|MUSCYP1X Mouse cytochrome P-1-450 (Cyp1a1) gene, 5' flank Length = 434 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 aagcagaggggcttcctggag 229 ||||||||||||||||||||| Sbjct: 406 aagcagaggggcttcctggag 386
>emb|AL732590.7| Mouse DNA sequence from clone RP23-464C2 on chromosome 2, complete sequence Length = 199056 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 336 ggaaatggcttactggtcaagagca 360 ||||||||||||||||| ||||||| Sbjct: 181686 ggaaatggcttactggttaagagca 181710
>gb|M10021.1|MUSCYP14X Mouse cytochrome P-1-450 gene, complete cds Length = 8809 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 209 aagcagaggggcttcctggag 229 ||||||||||||||||||||| Sbjct: 1564 aagcagaggggcttcctggag 1544
>dbj|AB011907.1| Unidentified nitrogen-fixing bacteria nifH gene for nitrogenase, partial cds, clone GFN7 Length = 429 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 5 ccacccagcagaacaccgccg 25
>dbj|AB011902.1| Unidentified nitrogen-fixing bacteria nifH gene for nitrogenase, partial cds, clone GFN18 Length = 429 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 ccacccagcagaacaccgccg 140 ||||||||||||||||||||| Sbjct: 5 ccacccagcagaacaccgccg 25
>dbj|AB017009.1| Streptomyces coelicolor gene for ChiB, partial cds Length = 2687 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 166 cgagagccgccgccgcctcgt 186 ||||||||||||||||||||| Sbjct: 389 cgagagccgccgccgcctcgt 369
>ref|XM_550578.1| Oryza sativa (japonica cultivar-group), mRNA Length = 882 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 326 ctggagctggacctggtgct 345
>ref|NM_188568.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1110 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgctccagctccgccgcgcc 49 |||||||||||||||||||| Sbjct: 1013 cgctccagctccgccgcgcc 994
>gb|AE017346.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 6, complete sequence Length = 1438950 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccgccgccgcctcgtcaaca 191 |||||||||||||||||||| Sbjct: 987689 ccgccgccgcctcgtcaaca 987670
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 gaacaccgccggcaccgcca 149 |||||||||||||||||||| Sbjct: 784394 gaacaccgccggcaccgcca 784375
>ref|XM_958092.1| Neurospora crassa OR74A hypothetical protein (NCU08425.1) partial mRNA Length = 1461 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccacccgcctcctctccgtcaccg 116 ||||||||||||||||| |||||| Sbjct: 5 ccacccgcctcctctccctcaccg 28
>ref|XM_329470.1| Neurospora crassa OR74A hypothetical protein (NCU08425.1) partial mRNA Length = 1461 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 ccacccgcctcctctccgtcaccg 116 ||||||||||||||||| |||||| Sbjct: 5 ccacccgcctcctctccctcaccg 28
>gb|AC116387.7| Mus musculus chromosome 18, clone RP23-37P9, complete sequence Length = 217116 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 gaaaccattattgcagtctt 562 |||||||||||||||||||| Sbjct: 112124 gaaaccattattgcagtctt 112143
>gb|AC140074.2| Mus musculus BAC clone RP23-141A5 from chromosome 8, complete sequence Length = 190381 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gagaacccagatttgtggaa 339 |||||||||||||||||||| Sbjct: 82103 gagaacccagatttgtggaa 82122
>gb|AC184054.2| Pan troglodytes BAC clone CH251-706J5 from chromosome 15, complete sequence Length = 177821 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 tgtatttgctgccattaagt 407 |||||||||||||||||||| Sbjct: 161399 tgtatttgctgccattaagt 161380
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 caccgccggcaccgccatcg 152 |||||||||||||||||||| Sbjct: 369470 caccgccggcaccgccatcg 369451
>ref|XM_386067.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05891.1) partial mRNA Length = 3678 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 ccgtcaccgcctccacccag 127 |||||||||||||||||||| Sbjct: 607 ccgtcaccgcctccacccag 626
>ref|XM_571610.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein (CNF03330) partial mRNA Length = 4413 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 ccgccgccgcctcgtcaaca 191 |||||||||||||||||||| Sbjct: 934 ccgccgccgcctcgtcaaca 915
>ref|XM_445719.1| Candida glabrata CBS138, CAGL0E00715g partial mRNA Length = 930 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 296 ctggagctggacctggtgct 315
>gb|AC132081.3| Mus musculus BAC clone RP24-510O7 from chromosome 7, complete sequence Length = 152620 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 210 agcagaggggcttcctggag 229 |||||||||||||||||||| Sbjct: 133246 agcagaggggcttcctggag 133227
>gb|AC124584.5| Mus musculus BAC clone RP23-127B8 from chromosome 8, complete sequence Length = 193083 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gagaacccagatttgtggaa 339 |||||||||||||||||||| Sbjct: 43727 gagaacccagatttgtggaa 43746
>ref|XM_809294.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511239.40) partial mRNA Length = 555 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 161 aacgacgagagccgccgccgcctc 184 ||||| |||||||||||||||||| Sbjct: 514 aacgaggagagccgccgccgcctc 537
>gb|AC121814.3| Mus musculus BAC clone RP23-457H19 from chromosome 15, complete sequence Length = 188928 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 337 gaaatggcttactggtcaagagca 360 ||||||||||| |||||||||||| Sbjct: 105822 gaaatggcttagtggtcaagagca 105799
>gb|AC122317.4| Mus musculus BAC clone RP23-304C21 from 12, complete sequence Length = 173567 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 agcaagcactcttccccaga 447 |||||||||||||||||||| Sbjct: 61405 agcaagcactcttccccaga 61386
>gb|AC113974.9| Mus musculus chromosome 18, clone RP23-140D3, complete sequence Length = 270111 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 gaaaccattattgcagtctt 562 |||||||||||||||||||| Sbjct: 51550 gaaaccattattgcagtctt 51531
>gb|BC007808.1| Homo sapiens myosin, heavy polypeptide 7B, cardiac muscle, beta, mRNA (cDNA clone IMAGE:4298477), partial cds Length = 3289 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ccagctccgccgcgccctcc 53 |||||||||||||||||||| Sbjct: 827 ccagctccgccgcgccctcc 808
>emb|AL589949.15| Human DNA sequence from clone RP11-169F1 on chromosome 10 Contains a CpG island, complete sequence Length = 153802 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctcgcgcgccctcctccccg 86 |||||||||||||||||||| Sbjct: 4956 ctcgcgcgccctcctccccg 4937
>emb|AL450490.6| Human DNA sequence from clone RP11-124N4 on chromosome X Contains the 5' end of the DCX gene for doublecortex; lissencephaly X-linked (doublecortin), complete sequence Length = 49532 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 367 agagactgtaaactctaatc 386 |||||||||||||||||||| Sbjct: 17020 agagactgtaaactctaatc 17039
>gb|AC067746.7| Homo sapiens chromosome 10 clone RP11-408L20, complete sequence Length = 189545 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 ctcgcgcgccctcctccccg 86 |||||||||||||||||||| Sbjct: 158135 ctcgcgcgccctcctccccg 158116
>emb|AL132825.35|HSDJ756N5 Human DNA sequence from clone RP4-756N5 on chromosome 20q11.21-12 Contains the MYH7B gene for myosin heavy polypeptide 7B (cardiac muscle) beta, the C20orf188 gene for a novel protein similar to Trp4-associated protein TAP1 (ABCB2) and two CpG islands, complete sequence Length = 123782 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ccagctccgccgcgccctcc 53 |||||||||||||||||||| Sbjct: 17970 ccagctccgccgcgccctcc 17951
>emb|Z97214.1|XLMILZ Xenopus laevis mRNA for MITR protein Length = 4435 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 tcctggagctggacctggtg 241 |||||||||||||||||||| Sbjct: 362 tcctggagctggacctggtg 343
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 65598 ctggagctggacctggtgct 65617
>gb|AC095787.7| Rattus norvegicus 14 BAC CH230-9M3 (Children's Hospital Oakland Research Institute) complete sequence Length = 242500 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ctccccgcatcctccacccgcctc 103 ||||||||||||| |||||||||| Sbjct: 216928 ctccccgcatccttcacccgcctc 216951
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cctggagctggacctggtgc 242 |||||||||||||||||||| Sbjct: 33210 cctggagctggacctggtgc 33229
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 cctggagctggacctggtgc 242 |||||||||||||||||||| Sbjct: 146372 cctggagctggacctggtgc 146391
>emb|BX569693.1| Synechococcus sp. WH8102 complete genome; segment 5/7 Length = 349213 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 aacaccgccggcaccgccat 150 |||||||||||||||||||| Sbjct: 157834 aacaccgccggcaccgccat 157853
>emb|BX284762.1|NCB13B3 Neurospora crassa DNA linkage group II BAC contig B13B3 Length = 82584 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 ccacccgcctcctctccgtcaccg 116 ||||||||||||||||| |||||| Sbjct: 76526 ccacccgcctcctctccctcaccg 76503
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 ctccagatcctcgacctcga 321 |||||||||||||||||||| Sbjct: 254155 ctccagatcctcgacctcga 254174
>emb|AJ492198.1|HVO492198 Haloferax volcanii pyrE2 gene for orotatephosphoribosyl transferase Length = 531 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 cagctccgccgcgccctcccgtcg 58 ||||||||||||||||||| |||| Sbjct: 459 cagctccgccgcgccctcctgtcg 436
>gb|AC117945.2| Homo sapiens chromosome 1 clone RP4-614N24, complete sequence Length = 160557 Score = 40.1 bits (20), Expect = 7.7 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Minus Query: 198 tgtacaggagcaagcag-aggggcttcctgga 228 ||||||||||||| ||| |||||||||||||| Sbjct: 100131 tgtacaggagcaatcaggaggggcttcctgga 100100
>gb|AC090480.11| Mus Musculus Strain C57BL6/J chromosome 8 BAC, RP23-248L18, Complete Sequence, complete sequence Length = 231039 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gagaacccagatttgtggaa 339 |||||||||||||||||||| Sbjct: 144972 gagaacccagatttgtggaa 144991
>gb|AC090220.13| Homo sapiens chromosome 18, clone RP11-712P20, complete sequence Length = 194334 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 472 ttgggtgagagggtgggatg 491 |||||||||||||||||||| Sbjct: 75714 ttgggtgagagggtgggatg 75733
>gb|AC182493.3| Pan troglodytes BAC clone CH251-215H7 from chromosome 15, complete sequence Length = 156271 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 tgtatttgctgccattaagt 407 |||||||||||||||||||| Sbjct: 114377 tgtatttgctgccattaagt 114358
>gb|AE011656.1| Xanthomonas axonopodis pv. citri str. 306, section 34 of 469 of the complete genome Length = 10029 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 caccgccggcaccgccatcg 152 |||||||||||||||||||| Sbjct: 7990 caccgccggcaccgccatcg 7971
>ref|NM_020884.1| Homo sapiens myosin, heavy polypeptide 7B, cardiac muscle, beta (MYH7B), mRNA Length = 6289 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ccagctccgccgcgccctcc 53 |||||||||||||||||||| Sbjct: 3849 ccagctccgccgcgccctcc 3830
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 cggtcagcgcctggtcagcc 471 |||||||||||||||||||| Sbjct: 3200401 cggtcagcgcctggtcagcc 3200420
>gb|L77912.1|MZEPAL Zea mays phenylalanine ammonia-lyase mRNA, complete cds Length = 2488 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ttcggcacgaggcccgctcctccg 24 ||||||||||||||| |||||||| Sbjct: 6 ttcggcacgaggcccactcctccg 29
>gb|DP000004.1| Lemur catta target 1 genomic scaffold Length = 1399362 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccctcctccccgcatcctcc 94 |||||||||||||||||||| Sbjct: 906577 ccctcctccccgcatcctcc 906558
>gb|AC129933.13| Mus musculus chromosome 1, clone RP23-234P14, complete sequence Length = 247595 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 ccattattgcagtcttaaaaataa 570 ||||||||||| |||||||||||| Sbjct: 106788 ccattattgcattcttaaaaataa 106765
>gb|AC022379.2|AC022379 Homo sapiens chromosome 3 clone 996C6 map 3p, complete sequence Length = 222542 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 ctggtcagccttgggtgagagggt 485 ||||||||||||||| |||||||| Sbjct: 184922 ctggtcagccttgggagagagggt 184899
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgctccagctccgccgcgcc 49 |||||||||||||||||||| Sbjct: 7009164 cgctccagctccgccgcgcc 7009145
>gb|AC104650.2| Homo sapiens BAC clone RP11-117J13 from 4, complete sequence Length = 163948 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 agcagaggggcttcctggag 229 |||||||||||||||||||| Sbjct: 31761 agcagaggggcttcctggag 31780
>gb|AC066615.7|AC066615 Homo sapiens chromosome 15 clone RP11-90J19 map 15q21.1, complete sequence Length = 175001 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 388 tgtatttgctgccattaagt 407 |||||||||||||||||||| Sbjct: 85797 tgtatttgctgccattaagt 85778
>gb|AC023471.4|AC023471 Homo sapiens chromosome 3 clone RP11-126L9 map 3p, complete sequence Length = 192973 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 ctggtcagccttgggtgagagggt 485 ||||||||||||||| |||||||| Sbjct: 50460 ctggtcagccttgggagagagggt 50437
>gb|AC123544.4| Lemur catta clone LB2-246N5, complete sequence Length = 195323 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 ccctcctccccgcatcctcc 94 |||||||||||||||||||| Sbjct: 91316 ccctcctccccgcatcctcc 91297
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgctccagctccgccgcgcc 49 |||||||||||||||||||| Sbjct: 130982 cgctccagctccgccgcgcc 130963
>dbj|AP002838.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0038F22 Length = 101666 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 62819 ctggagctggacctggtgct 62838
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 164072 ctggagctggacctggtgct 164091
>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1274F11 Length = 171257 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cccgtcgccagcttcctcgcgcgc 75 ||||||||||| |||||||||||| Sbjct: 125425 cccgtcgccaggttcctcgcgcgc 125402
>dbj|AK063653.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-B04, full insert sequence Length = 982 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 cgctccagctccgccgcgcc 49 |||||||||||||||||||| Sbjct: 700 cgctccagctccgccgcgcc 681
>dbj|AK062762.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-H02, full insert sequence Length = 712 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 cccgtcgccagcttcctcgcgcgc 75 ||||||||||| |||||||||||| Sbjct: 377 cccgtcgccaggttcctcgcgcgc 400
>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0478E02 Length = 140715 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 cccgtcgccagcttcctcgcgcgc 75 ||||||||||| |||||||||||| Sbjct: 54636 cccgtcgccaggttcctcgcgcgc 54613
>dbj|AB040945.2| Homo sapiens mRNA for KIAA1512 protein, partial cds Length = 6289 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ccagctccgccgcgccctcc 53 |||||||||||||||||||| Sbjct: 3849 ccagctccgccgcgccctcc 3830
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggagctggacctggtgct 243 |||||||||||||||||||| Sbjct: 1115134 ctggagctggacctggtgct 1115153
>gb|AC024910.5| Homo sapiens chromosome 3 clone RP11-380A22 map 3p, complete sequence Length = 207606 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 462 ctggtcagccttgggtgagagggt 485 ||||||||||||||| |||||||| Sbjct: 206907 ctggtcagccttgggagagagggt 206884
>dbj|AP007297.1| Lotus japonicus genomic DNA, clone:LjT02G13, TM0489a, complete sequence Length = 72531 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tgagagggtgggatgacaagaggg 500 ||||||||||||||||| |||||| Sbjct: 30163 tgagagggtgggatgacgagaggg 30140
>dbj|AP006378.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT44A10, TM0223, complete sequence Length = 101752 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tgagagggtgggatgacaagaggg 500 ||||||||||||||||| |||||| Sbjct: 99387 tgagagggtgggatgacgagaggg 99410
>dbj|AP006074.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT40O02, TM0111b, complete sequence Length = 92724 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 477 tgagagggtgggatgacaagaggg 500 ||||||||||||||||| |||||| Sbjct: 65 tgagagggtgggatgacgagaggg 42
>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135, complete sequence Length = 96988 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 477 tgagagggtgggatgacaagaggg 500 ||||||||||||||||| |||||| Sbjct: 3449 tgagagggtgggatgacgagaggg 3472
>gb|AC027128.5| Homo sapiens chromosome 3 clone RP11-627C1 map 3p, complete sequence Length = 175773 Score = 40.1 bits (20), Expect = 7.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 462 ctggtcagccttgggtgagagggt 485 ||||||||||||||| |||||||| Sbjct: 103116 ctggtcagccttgggagagagggt 103139 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,321,630 Number of Sequences: 3902068 Number of extensions: 5321630 Number of successful extensions: 123572 Number of sequences better than 10.0: 120 Number of HSP's better than 10.0 without gapping: 122 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 121614 Number of HSP's gapped (non-prelim): 1957 length of query: 570 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 547 effective length of database: 17,143,297,704 effective search space: 9377383844088 effective search space used: 9377383844088 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)