ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14o16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1134 bits (572), Expect = 0.0 Identities = 585/588 (99%), Gaps = 1/588 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122669 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 122610 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122609 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 122550 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122549 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 122490 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122489 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 122430 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122429 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 122370 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122369 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 122310 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122309 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 122250 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 122249 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcgtaa 122190 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122189 caaattagttgatagtgataggatcccttttttggcgtccccatgtcccccctgtggtgt 122130 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122129 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 122083 Score = 1134 bits (572), Expect = 0.0 Identities = 585/588 (99%), Gaps = 1/588 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92225 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 92284 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92285 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 92344 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92345 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92404 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92405 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 92464 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92465 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92524 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92525 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 92584 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92585 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 92644 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 92645 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcgtaa 92704 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92705 caaattagttgatagtgataggatcccttttttggcgtccccatgtcccccctgtggtgt 92764 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 92765 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 92811
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 1092 bits (551), Expect = 0.0 Identities = 582/590 (98%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346665 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 14346724 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346725 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 14346784 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346785 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 14346844 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346845 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 14346904 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346905 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 14346964 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346965 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 14347024 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14347025 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 14347084 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 14347085 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 14347144 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc--tgtggt 551 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 14347145 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccctgtgtggt 14347204 Query: 552 gtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14347205 gtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 14347253 Score = 434 bits (219), Expect = e-118 Identities = 225/227 (99%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807896 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 807837 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807836 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 807777 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 807776 gtaatcgccggtcagccatacggcggcgaatccgttcccgggccttgtacacaccgcccg 807717 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgt 240 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 807716 tcacactataggagctggccatgtttgaagtcattatccttaaccgt 807670 Score = 127 bits (64), Expect = 5e-26 Identities = 82/88 (93%) Strand = Plus / Minus Query: 91 ggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaatcgccggtcagcc 150 |||||||||||||| |||||||||||||||| |||| ||||||||||||| | ||||||| Sbjct: 11194557 ggattgcaggctgctactcgcctgcatgaagtaggagtcgctagtaatcgtctgtcagcc 11194498 Query: 151 atacggcggtgaatccgttcccgggcct 178 ||||||| |||||||||||||||||||| Sbjct: 11194497 atacggctgtgaatccgttcccgggcct 11194470
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 1092 bits (551), Expect = 0.0 Identities = 582/590 (98%), Gaps = 3/590 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68587 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 68646 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68647 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 68706 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68707 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 68766 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68767 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 68826 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68827 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 68886 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68887 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 68946 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68947 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 69006 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 69007 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 69066 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc--tgtggt 551 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 69067 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccctgtgtggt 69126 Query: 552 gtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 69127 gtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 69175
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122676 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 122617 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122616 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 122557 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122556 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 122497 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122496 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 122437 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122436 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 122377 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122376 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 122317 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122316 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 122257 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 122256 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 122197 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 122196 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 122137 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122136 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 122087 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92480 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 92539 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92540 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 92599 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92600 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92659 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92660 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 92719 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92720 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92779 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92780 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 92839 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92840 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 92899 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 92900 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 92959 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 92960 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 93019 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 93020 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 93069
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122676 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 122617 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122616 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 122557 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122556 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 122497 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122496 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 122437 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122436 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 122377 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122376 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 122317 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122316 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 122257 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 122256 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 122197 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 122196 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 122137 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122136 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 122087 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92480 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 92539 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92540 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 92599 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92600 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92659 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92660 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 92719 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92720 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92779 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92780 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 92839 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92840 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 92899 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 92900 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 92959 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 92960 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 93019 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 93020 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 93069
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122625 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 122566 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122565 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 122506 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122505 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 122446 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122445 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 122386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122385 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 122326 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122325 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 122266 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122265 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 122206 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 122205 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 122146 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 122145 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 122086 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122085 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 122036 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92425 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 92484 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92485 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 92544 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92545 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92604 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92605 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 92664 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92665 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92724 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92725 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 92784 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92785 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 92844 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 92845 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 92904 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 92905 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 92964 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 92965 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 93014
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122646 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 122587 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122586 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 122527 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122526 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 122467 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122466 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 122407 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122406 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 122347 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122346 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 122287 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122286 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 122227 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 122226 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 122167 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 122166 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 122107 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122106 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 122057 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92472 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 92531 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92532 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 92591 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92592 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92651 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92652 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 92711 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92712 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92771 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92772 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 92831 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92832 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 92891 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 92892 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 92951 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 92952 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 93011 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 93012 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 93061
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87650 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 87709 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87710 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 87769 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87770 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 87829 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87830 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 87889 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87890 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 87949 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87950 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 88009 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88010 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 88069 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 88070 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 88129 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 88130 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 88189 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 88190 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 88239 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11247 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 11306 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11307 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 11366 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11367 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 11426 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11427 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 11486 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11487 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 11546 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11547 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 11606 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11607 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 11666 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 11667 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 11726 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 11727 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 11786 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 11787 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 11836 Score = 1072 bits (541), Expect = 0.0 Identities = 581/593 (97%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119525 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 119584 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119585 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 119644 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119645 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 119704 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119705 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 119764 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119765 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 119824 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 119825 ggctggatcacctccttttcagggagagataatgcttatgcttattgggtattttggttt 119884 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119885 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 119944 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 119945 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 120004 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-----tgt 548 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 120005 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccccgtgt 120064 Query: 549 ggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 120065 ggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 120116
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138055 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 138114 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138115 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 138174 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138175 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 138234 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138235 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 138294 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138295 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 138354 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138355 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 138414 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138415 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 138474 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 138475 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 138534 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 138535 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 138594 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 138595 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 138644
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206577 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9206636 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206637 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 9206696 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206697 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9206756 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206757 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9206816 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206817 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9206876 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206877 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 9206936 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9206937 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9206996 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9206997 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9207056 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 9207057 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 9207116 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9207117 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 9207166 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129624 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9129683 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129684 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 9129743 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129744 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9129803 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129804 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9129863 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129864 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9129923 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129924 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 9129983 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9129984 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9130043 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9130044 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9130103 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 9130104 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 9130163 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9130164 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 9130213 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053321 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9053380 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053381 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 9053440 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053441 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9053500 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053501 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9053560 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053561 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9053620 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053621 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 9053680 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9053681 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9053740 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9053741 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9053800 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 9053801 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 9053860 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9053861 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 9053910 Score = 1080 bits (545), Expect = 0.0 Identities = 582/593 (98%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265405 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9265464 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265465 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 9265524 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265525 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9265584 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265585 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9265644 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265645 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9265704 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265705 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 9265764 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9265765 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9265824 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9265825 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9265884 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-----tgt 548 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 9265885 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccccgtgt 9265944 Query: 549 ggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9265945 ggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 9265996 Score = 1072 bits (541), Expect = 0.0 Identities = 581/593 (97%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9224905 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9224964 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9224965 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaagaatcgcta 9225024 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9225025 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9225084 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9225085 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9225144 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9225145 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9225204 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9225205 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 9225264 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9225265 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9225324 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9225325 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9225384 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-----tgt 548 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 9225385 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccccgtgt 9225444 Query: 549 ggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9225445 ggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 9225496 Score = 1072 bits (541), Expect = 0.0 Identities = 581/593 (97%), Gaps = 6/593 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161499 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9161558 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161559 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 9161618 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161619 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9161678 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161679 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9161738 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161739 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9161798 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9161799 ggctggatcacctccttttcagggagagataatgcttatgcttattgggtattttggttt 9161858 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9161859 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9161918 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9161919 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9161978 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-----tgt 548 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||| Sbjct: 9161979 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccccgtgt 9162038 Query: 549 ggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9162039 ggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 9162090 Score = 155 bits (78), Expect = 2e-34 Identities = 81/82 (98%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 23619083 acacgtgctacaatgggcgggacaaagggtcgcgatctcgtgagggtgagctaactccaa 23619024 Query: 74 aaacccgtcctcagttcggatt 95 |||||||||||||||||||||| Sbjct: 23619023 aaacccgtcctcagttcggatt 23619002 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 270 cgactggagtgaagtcgtaacaaggtagccgta 302 ||||||| ||||||||||||||||||||||||| Sbjct: 32932776 cgactggggtgaagtcgtaacaaggtagccgta 32932744 Score = 52.0 bits (26), Expect = 0.002 Identities = 63/74 (85%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 126 aatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacac 185 |||||||||||||||| | ||||| || | ||||||||| || ||||||| ||||||| Sbjct: 32932965 aatcgctagtaatcgcggatcagc-atgccgcggtgaatatgtacccgggcgctgtacac 32932907 Query: 186 accgcccgtcacac 199 ||||||| |||||| Sbjct: 32932906 accgcccatcacac 32932893 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 36 caaagggtcgcgatctcgcgagggtgagctaactccaaaa 75 ||||||||||||||||| |||| |||| ||||||||||| Sbjct: 24558232 caaagggtcgcgatctcatgaggatgaggtaactccaaaa 24558271 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 389 ccaaaaagaaggcagctacgtctgagctaa 418 ||||||| | |||||||||||||||||||| Sbjct: 28128130 ccaaaaaaagggcagctacgtctgagctaa 28128101
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935392 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 19935451 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935452 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 19935511 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935512 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 19935571 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935572 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 19935631 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935632 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 19935691 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935692 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 19935751 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19935752 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 19935811 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 19935812 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 19935871 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 19935872 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 19935931 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 19935932 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 19935981 Score = 1057 bits (533), Expect = 0.0 Identities = 581/597 (97%), Gaps = 10/597 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10280045 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 10279986 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10279985 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 10279926 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10279925 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 10279866 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10279865 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggaggggaatg 10279806 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10279805 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 10279746 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10279745 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 10279686 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10279685 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 10279626 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 10279625 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 10279566 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-------- 545 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 10279565 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccccccccc 10279506 Query: 546 -tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10279505 gtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 10279450 Score = 860 bits (434), Expect = 0.0 Identities = 480/494 (97%), Gaps = 6/494 (1%) Strand = Plus / Plus Query: 113 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384352 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 10384411 Query: 173 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384412 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 10384471 Query: 233 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384472 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 10384531 Query: 293 ggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgcttat 352 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10384532 ggtagccatactggaaggtgcggctggatcacctccttttcagggaaagctaatgcttat 10384591 Query: 353 gcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctg 412 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10384592 gtttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgtctg 10384651 Query: 413 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatca 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10384652 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatga 10384711 Query: 473 gcttattatcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtc 532 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10384712 gcttattatcctaggtcggaacaaattagttgatagtgataggatcccctttttgacgtc 10384771 Query: 533 cccatgtcccccc-----tgtggtgtggcggcatgggggatgtcaaaaggaaagggatgg 587 |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10384772 cccatgcccccccccccgtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatgg 10384830 Query: 588 agtttttctcgctt 601 |||||||||||||| Sbjct: 10384831 agtttttctcgctt 10384844 Score = 385 bits (194), Expect = e-103 Identities = 209/214 (97%) Strand = Plus / Minus Query: 290 caaggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16803439 caaggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgct 16803380 Query: 350 tatgcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgt 409 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 16803379 tatgcttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgt 16803320 Query: 410 ctgagctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctca 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 16803319 ctgagctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaacctca 16803260 Query: 470 tcagcttattatcctaggtcgtaacaaattagtt 503 | |||||||||||||| |||| |||||||||||| Sbjct: 16803259 tgagcttattatcctatgtcggaacaaattagtt 16803226 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10384271 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 10384330 Query: 74 aaacccgtcctcagttcggattgca 98 ||||||||||||||||||||||||| Sbjct: 10384331 aaacccgtcctcagttcggattgca 10384355 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 572 aaaaggaaagggatggagtttt 593 |||||||||||||||||||||| Sbjct: 8517629 aaaaggaaagggatggagtttt 8517608
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50651 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 50592 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50591 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 50532 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50531 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 50472 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50471 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 50412 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50411 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 50352 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50351 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 50292 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50291 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 50232 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 50231 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 50172 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 50171 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 50112 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 50111 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 50062
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946668 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 19946727 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946728 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 19946787 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946788 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 19946847 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946848 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 19946907 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946908 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 19946967 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19946968 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 19947027 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19947028 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 19947087 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 19947088 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 19947147 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 19947148 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 19947207 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 19947208 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 19947257 Score = 1057 bits (533), Expect = 0.0 Identities = 581/597 (97%), Gaps = 10/597 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286084 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 10286025 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10286024 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 10285965 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285964 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 10285905 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 10285904 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggaggggaatg 10285845 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285844 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 10285785 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285784 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 10285725 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10285724 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 10285665 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 10285664 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 10285605 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-------- 545 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 10285604 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccccccccc 10285545 Query: 546 -tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10285544 gtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 10285489 Score = 860 bits (434), Expect = 0.0 Identities = 480/494 (97%), Gaps = 6/494 (1%) Strand = Plus / Plus Query: 113 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390391 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 10390450 Query: 173 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390451 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 10390510 Query: 233 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390511 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 10390570 Query: 293 ggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgcttat 352 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10390571 ggtagccatactggaaggtgcggctggatcacctccttttcagggaaagctaatgcttat 10390630 Query: 353 gcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctg 412 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 10390631 gtttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgtctg 10390690 Query: 413 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatca 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 10390691 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatga 10390750 Query: 473 gcttattatcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtc 532 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 10390751 gcttattatcctaggtcggaacaaattagttgatagtgataggatcccctttttgacgtc 10390810 Query: 533 cccatgtcccccc-----tgtggtgtggcggcatgggggatgtcaaaaggaaagggatgg 587 |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10390811 cccatgcccccccccccgtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatgg 10390869 Query: 588 agtttttctcgctt 601 |||||||||||||| Sbjct: 10390870 agtttttctcgctt 10390883 Score = 385 bits (194), Expect = e-103 Identities = 209/214 (97%) Strand = Plus / Minus Query: 290 caaggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16812479 caaggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgct 16812420 Query: 350 tatgcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgt 409 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 16812419 tatgcttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgt 16812360 Query: 410 ctgagctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctca 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 16812359 ctgagctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaacctca 16812300 Query: 470 tcagcttattatcctaggtcgtaacaaattagtt 503 | |||||||||||||| |||| |||||||||||| Sbjct: 16812299 tgagcttattatcctatgtcggaacaaattagtt 16812266 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10390310 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 10390369 Query: 74 aaacccgtcctcagttcggattgca 98 ||||||||||||||||||||||||| Sbjct: 10390370 aaacccgtcctcagttcggattgca 10390394 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 572 aaaaggaaagggatggagtttt 593 |||||||||||||||||||||| Sbjct: 8522728 aaaaggaaagggatggagtttt 8522707
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122619 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 122560 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122559 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 122500 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122499 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 122440 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122439 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 122380 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122379 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 122320 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122319 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 122260 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122259 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 122200 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 122199 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 122140 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 122139 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 122080 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122079 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 122030 Score = 1088 bits (549), Expect = 0.0 Identities = 582/591 (98%), Gaps = 4/591 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92420 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 92479 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92480 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 92539 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92540 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92599 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92600 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 92659 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92660 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92719 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92720 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 92779 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92780 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 92839 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 92840 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 92899 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc---tgtgg 550 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| ||||| Sbjct: 92900 caaattagttgatagtgataggatcccctttttgacgtccccatgcccccccccgtgtgg 92959 Query: 551 tgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 92960 tgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 93009
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1084 bits (547), Expect = 0.0 Identities = 581/590 (98%), Gaps = 3/590 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126212 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 126153 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126152 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 126093 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126092 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 126033 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126032 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 125973 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125972 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 125913 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125912 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 125853 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125852 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 125793 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| || Sbjct: 125792 tcttctttcgtttagggtgaagtaagaccaagctcatgagtttattatcctaggtcggaa 125733 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc--tgtggt 551 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 125732 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccgtgtggt 125673 Query: 552 gtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 125672 gtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 125624
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1084 bits (547), Expect = 0.0 Identities = 581/590 (98%), Gaps = 3/590 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828753 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 12828694 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828693 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 12828634 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828633 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 12828574 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828573 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 12828514 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828513 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 12828454 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828453 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 12828394 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12828393 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 12828334 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| || |||||||||||||||| || Sbjct: 12828333 tcttctttcgtttagggtgaagtaagaccaagctcatgagtttattatcctaggtcggaa 12828274 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc--tgtggt 551 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 12828273 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccgtgtggt 12828214 Query: 552 gtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12828213 gtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 12828165 Score = 254 bits (128), Expect = 3e-64 Identities = 128/128 (100%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883966 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 883907 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 883906 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 883847 Query: 134 gtaatcgc 141 |||||||| Sbjct: 883846 gtaatcgc 883839 Score = 244 bits (123), Expect = 3e-61 Identities = 173/189 (91%), Gaps = 8/189 (4%) Strand = Plus / Minus Query: 420 cttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatcagcttatt 479 ||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 14364803 cttggatatggaagttttctttcgtttagggtgaagtaagatcaagctcatgagcttatt 14364744 Query: 480 atcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtccccatgt 539 ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 14364743 atcctaggtcggaacaaattagttgatagtgataggatcccctttttgacgtccccatgc 14364684 Query: 540 cccccc-------tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagttt 592 |||||| |||||||||||||||| | ||||||||||||||||||||| |||||| Sbjct: 14364683 cccccccccccggtgtggtgtggcggcat-gaggatgtcaaaaggaaagggatagagttt 14364625 Query: 593 ttctcgctt 601 ||||||||| Sbjct: 14364624 ttctcgctt 14364616
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328347 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 328288 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328287 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 328228 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328227 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 328168 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 328167 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 328108 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328107 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 328048 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 328047 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 327988 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327987 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 327928 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 327927 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 327868 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 327867 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 327812 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 327811 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 327765 Score = 75.8 bits (38), Expect = 1e-10 Identities = 99/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 82 cctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaatcgc 141 ||||||||||||||| |||||||||| ||||||| || |||||||||||||||| Sbjct: 419911 cctcagttcggattgttctctgcaactcgggaacatgaagtagaaatcgctagtaatcgc 419852 Query: 142 cggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgtcacac 199 | ||||| || | ||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 419851 ggatcagc-atgccgcggtgaatatgtacccgggccctgtacacaccgcccgtcacac 419795 Score = 58.0 bits (29), Expect = 3e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 270 cgactggagtgaagtcgtaacaaggtagccgta 302 ||||||| ||||||||||||||||||||||||| Sbjct: 419678 cgactggggtgaagtcgtaacaaggtagccgta 419646 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 agaaggcagctacgtctgag 414 |||||||||||||||||||| Sbjct: 149335 agaaggcagctacgtctgag 149354
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47633 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 47574 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47573 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 47514 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47513 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 47454 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47453 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 47394 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47393 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 47334 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47333 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 47274 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47273 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 47214 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 47213 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 47154 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 47153 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 47098 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 47097 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 47051 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17485 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 17544 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17545 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 17604 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17605 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 17664 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17665 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 17724 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17725 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 17784 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17785 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 17844 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17845 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 17904 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 17905 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 17964 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 17965 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 18020 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 18021 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 18067
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 1076 bits (543), Expect = 0.0 Identities = 582/594 (97%), Gaps = 7/594 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179292 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 14179233 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179232 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 14179173 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179172 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 14179113 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179112 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 14179053 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14179052 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 14178993 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14178992 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 14178933 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14178932 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 14178873 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 14178872 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 14178813 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc------tg 547 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| || Sbjct: 14178812 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccccccgtg 14178753 Query: 548 tggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 14178752 tggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 14178700 Score = 170 bits (86), Expect = 3e-39 Identities = 128/142 (90%) Strand = Plus / Plus Query: 29 ggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaacccgtcctcagt 88 ||||||||||||| | ||||||||| || ||||||||||||||||||| |||||||| || Sbjct: 22884303 ggcgggacaaaggattgcgatctcgtgaaggtgagctaactccaaaaatccgtcctcggt 22884362 Query: 89 tcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaatcgccggtcag 148 |||||||| ||| |||||||| ||||||||||||||||||||||||||| ||||| || Sbjct: 22884363 tcggattgtaggttgcaactcatttgcatgaagcaggaatcgctagtaatcaccggttag 22884422 Query: 149 ccatacggcggtgaatccgttc 170 ||||||| |||||||||||||| Sbjct: 22884423 ccatacgacggtgaatccgttc 22884444 Score = 145 bits (73), Expect = 2e-31 Identities = 124/140 (88%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 381 cttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaagtcttctt 440 ||||| |||||||| |||||||||||||| ||||||||| ||||||||||||||||| || Sbjct: 22884875 cttcatgcccaaaaggaaggcagctacgtttgagctaaatttggatatggaagtcttttt 22884934 Query: 441 tcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaacaa--at 498 |||||||||| ||||| |||||||||||| |||||||||||||| ||| ||||| | Sbjct: 22884935 tcgtttagggcaaagtacgaccaagctcatgagcttattatcctatatcggaacaattac 22884994 Query: 499 tagttgatagtgataggatc 518 ||||||||| |||||||||| Sbjct: 22884995 tagttgatattgataggatc 22885014 Score = 103 bits (52), Expect = 7e-19 Identities = 100/116 (86%) Strand = Plus / Plus Query: 182 acacaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgta 241 ||||| ||||||||||||||||| || || | ||||||||| |||||| |||||||| || Sbjct: 22884446 acacaacgcccgtcacactatagaagttgactatgtttgaactcattaaccttaaccata 22884505 Query: 242 aggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtag 297 || ||| ||||||||||||||||| | |||| ||||||||| |||||||||||| Sbjct: 22884506 agaaggaagatgcctaaggctaggcctttgactagagtgaagttgtaacaaggtag 22884561 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 563 ggggatgtcaaaaggaaagggatggagtttttctcg 598 |||||| |||||||||||||||| |||||||||||| Sbjct: 22885067 ggggatatcaaaaggaaagggatagagtttttctcg 22885102 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 299 cgtactggaaggtgcggctggatcacctcctttt 332 ||||||||||| ||| |||||||||||||||||| Sbjct: 22884800 cgtactggaagttgcagctggatcacctcctttt 22884833
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126472 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 126413 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126412 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 126353 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126352 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 126293 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126292 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 126233 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126232 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 126173 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126172 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 126113 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126112 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 126053 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 126052 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 125993 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 125992 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 125937 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 125936 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 125890 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96365 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 96424 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 96484 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 96544 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96545 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 96604 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96605 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 96664 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96665 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 96724 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96725 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 96784 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 96785 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 96844 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 96845 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 96900 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 96901 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 96947
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 1076 bits (543), Expect = 0.0 Identities = 582/594 (97%), Gaps = 7/594 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64173 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 64114 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64113 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 64054 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64053 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 63994 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63993 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 63934 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63933 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 63874 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63873 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 63814 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63813 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 63754 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 63753 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 63694 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc------tg 547 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| || Sbjct: 63693 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccccccgtg 63634 Query: 548 tggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 63633 tggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 63581
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127189 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 127130 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127129 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 127070 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127069 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 127010 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127009 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 126950 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126949 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 126890 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126889 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 126830 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126829 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 126770 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 126769 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 126710 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 126709 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 126654 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 126653 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 126607 Score = 1076 bits (543), Expect = 0.0 Identities = 578/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97042 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 97101 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97102 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 97161 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97162 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 97221 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 97222 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 97281 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97282 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 97341 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97342 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 97401 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97402 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 97461 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 97462 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 97521 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 97522 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 97577 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 97578 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 97624
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1068 bits (539), Expect = 0.0 Identities = 577/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126403 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 126344 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126343 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 126284 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 126283 gtaatcgccggtcagccatacggcggcgaatccgttcccgggccttgtacacaccgcccg 126224 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126223 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 126164 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126163 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 126104 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126103 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 126044 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126043 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 125984 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 125983 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 125924 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 125923 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 125868 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 125867 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 125821 Score = 1068 bits (539), Expect = 0.0 Identities = 577/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96334 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 96393 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96394 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 96453 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 96454 gtaatcgccggtcagccatacggcggcgaatccgttcccgggccttgtacacaccgcccg 96513 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96514 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 96573 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96574 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 96633 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96634 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 96693 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96694 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 96753 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 96754 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 96813 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 96814 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 96869 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 96870 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 96916
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1068 bits (539), Expect = 0.0 Identities = 577/588 (98%), Gaps = 5/588 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2687 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 2746 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2747 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 2806 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2807 gtaatcgccggtcagccatacggcggcgaatccgttcccgggccttgtacacaccgcccg 2866 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2867 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 2926 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2927 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2986 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2987 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 3046 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3047 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 3106 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 3107 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 3166 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccctgtggtgt 553 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 3167 caaattagttgatagtgataggatcccctttttgacgtccccatgtcccccc----gtgt 3222 Query: 554 ggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 3223 ggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 3269
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1057 bits (533), Expect = 0.0 Identities = 581/597 (97%), Gaps = 10/597 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61370 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 61311 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61310 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 61251 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61250 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 61191 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 61190 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggaggggaatg 61131 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61130 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 61071 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61070 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 61011 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61010 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 60951 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 60950 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 60891 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc-------- 545 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 60890 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccccccccccc 60831 Query: 546 -tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 60830 gtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 60775
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1015 bits (512), Expect = 0.0 Identities = 527/532 (99%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244590 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 9244531 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244530 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 9244471 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244470 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 9244411 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244410 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 9244351 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244350 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 9244291 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244290 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 9244231 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9244230 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 9244171 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 9244170 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 9244111 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc 545 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 9244110 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccc 9244059 Score = 99.6 bits (50), Expect = 1e-17 Identities = 60/62 (96%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 540 cccccctgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgc 599 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9244053 cccccgtgtggtgtggcggcatgggg-atgtcaaaaggaaagggatggagtttttctcgc 9243995 Query: 600 tt 601 || Sbjct: 9243994 tt 9243993 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 387 gcccaaaaagaaggcagctacgtctgagctaa 418 |||||||| || || ||||||||||||||||| Sbjct: 5398620 gcccaaaatgatggtagctacgtctgagctaa 5398651
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1015 bits (512), Expect = 0.0 Identities = 527/532 (99%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55803 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 55744 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55743 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 55684 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55683 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 55624 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55623 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 55564 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55563 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 55504 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55503 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 55444 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55443 gacactgcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 55384 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 55383 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 55324 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccc 545 ||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 55323 caaattagttgatagtgataggatcccctttttgacgtccccatgccccccc 55272 Score = 99.6 bits (50), Expect = 1e-17 Identities = 60/62 (96%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 540 cccccctgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgc 599 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 55266 cccccgtgtggtgtggcggcatgggg-atgtcaaaaggaaagggatggagtttttctcgc 55208 Query: 600 tt 601 || Sbjct: 55207 tt 55206
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 946 bits (477), Expect = 0.0 Identities = 519/533 (97%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 18602835 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcaagggtgagctaactccaa 18602776 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18602775 aaactcgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 18602716 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 18602715 gtaatcgcaggtcagccatacggcggtgaatccgttcccgggccatgtacacaccgccca 18602656 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18602655 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 18602596 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18602595 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 18602536 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18602535 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 18602476 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 18602475 gacactgcttcacgcccaaaaacaaggcagctacgtctgagctaaacttggatatggaag 18602416 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 18602415 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 18602356 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccct 546 || || ||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 18602355 cagataagttgatagtgataggatcccctttttgacatccccatggcccccct 18602303 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 173 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattacc 231 |||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||| Sbjct: 11580754 gggccttgtacacaccgcccgtcatactataggagctgcccatgtttggagtcattacc 11580812 Score = 79.8 bits (40), Expect = 1e-11 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 546 tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 18602289 tgtggtgtggcgccatgggg-atgtcaaaaggaaagggatgaagtttttctcgctt 18602235 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 171 ccgggccttgtacacaccgcccgtcacac 199 |||||||||||||||||||||| |||||| Sbjct: 11003597 ccgggccttgtacacaccgcccatcacac 11003625
>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085C03 Length = 188905 Score = 946 bits (477), Expect = 0.0 Identities = 519/533 (97%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 185718 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcaagggtgagctaactccaa 185659 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185658 aaactcgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 185599 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 185598 gtaatcgcaggtcagccatacggcggtgaatccgttcccgggccatgtacacaccgccca 185539 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185538 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 185479 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185478 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 185419 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185418 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 185359 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 185358 gacactgcttcacgcccaaaaacaaggcagctacgtctgagctaaacttggatatggaag 185299 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 185298 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 185239 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccct 546 || || ||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 185238 cagataagttgatagtgataggatcccctttttgacatccccatggcccccct 185186 Score = 79.8 bits (40), Expect = 1e-11 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 546 tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 185172 tgtggtgtggcgccatgggg-atgtcaaaaggaaagggatgaagtttttctcgctt 185118
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 946 bits (477), Expect = 0.0 Identities = 519/533 (97%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 54938 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcaagggtgagctaactccaa 54879 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54878 aaactcgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 54819 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 54818 gtaatcgcaggtcagccatacggcggtgaatccgttcccgggccatgtacacaccgccca 54759 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54758 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 54699 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54698 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 54639 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54638 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 54579 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 54578 gacactgcttcacgcccaaaaacaaggcagctacgtctgagctaaacttggatatggaag 54519 Query: 434 tcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctaggtcgtaa 493 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 54518 tcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatcctaggtcggaa 54459 Query: 494 caaattagttgatagtgataggatcccttttttgacgtccccatgtcccccct 546 || || ||||||||||||||||||||| |||||||| |||||||| ||||||| Sbjct: 54458 cagataagttgatagtgataggatcccctttttgacatccccatggcccccct 54406 Score = 79.8 bits (40), Expect = 1e-11 Identities = 53/56 (94%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 546 tgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 |||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 54392 tgtggtgtggcgccatgggg-atgtcaaaaggaaagggatgaagtttttctcgctt 54338
>gb|DQ001731.1| Secale cereale voucher P.M. McNutt 006 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2582 Score = 902 bits (455), Expect = 0.0 Identities = 475/479 (99%), Gaps = 2/479 (0%) Strand = Plus / Plus Query: 123 aggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgta 60 Query: 183 cacaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cacaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaa 120 Query: 243 ggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 302 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 g-agggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 179 Query: 303 ctggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattggg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 ctggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattggg 239 Query: 363 tattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaactt 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 tattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaactt 299 Query: 423 ggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatc 482 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 300 ggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatc 359 Query: 483 ctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtccccatgtccc 542 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 360 ctaggtcgtaacaaattagttgatagtgataggatcccttttttggcgtccccatgtccc 419 Query: 543 ccctgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 420 ccctgtggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgctt 477
>gb|DQ001732.1| Lolium perenne voucher P.M. McNutt 018 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2589 Score = 872 bits (440), Expect = 0.0 Identities = 473/482 (98%), Gaps = 4/482 (0%) Strand = Plus / Plus Query: 123 aggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgta 60 Query: 183 cacaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaa 242 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 61 cacaccgcccgtcacactataggagttggccatgtttgaagtcattacccttaaccgtaa 120 Query: 243 ggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 180 Query: 303 ctggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattggg 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattggg 240 Query: 363 tattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaactt 422 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 241 tattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgggctaaactt 300 Query: 423 ggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatc 482 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 301 agatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatgagcttattatc 360 Query: 483 ctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtccccatgt--- 539 |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctaggtcggaacaaattagttgatagtgataggatcccttttttgacgtccccatgtccc 420 Query: 540 cccccctgtggtgtggcggcatgggggatgtcaaaaggaaagggatggagtttttctcgc 599 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 421 cccccctgtggtgtggcggcat-ggggatgtcaaaaggaaagggatggagtttttctcgc 479 Query: 600 tt 601 || Sbjct: 480 tt 481
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 860 bits (434), Expect = 0.0 Identities = 480/494 (97%), Gaps = 6/494 (1%) Strand = Plus / Plus Query: 113 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90744 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 90803 Query: 173 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90804 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 90863 Query: 233 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90864 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 90923 Query: 293 ggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgcttat 352 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 90924 ggtagccatactggaaggtgcggctggatcacctccttttcagggaaagctaatgcttat 90983 Query: 353 gcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctg 412 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 90984 gtttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgtctg 91043 Query: 413 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatca 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 91044 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatga 91103 Query: 473 gcttattatcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtc 532 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 91104 gcttattatcctaggtcggaacaaattagttgatagtgataggatcccctttttgacgtc 91163 Query: 533 cccatgtcccccc-----tgtggtgtggcggcatgggggatgtcaaaaggaaagggatgg 587 |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 91164 cccatgcccccccccccgtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatgg 91222 Query: 588 agtttttctcgctt 601 |||||||||||||| Sbjct: 91223 agtttttctcgctt 91236 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90663 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 90722 Query: 74 aaacccgtcctcagttcggattgca 98 ||||||||||||||||||||||||| Sbjct: 90723 aaacccgtcctcagttcggattgca 90747
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 860 bits (434), Expect = 0.0 Identities = 480/494 (97%), Gaps = 6/494 (1%) Strand = Plus / Plus Query: 113 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 172 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24808 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 24867 Query: 173 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 232 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24868 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 24927 Query: 233 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24928 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 24987 Query: 293 ggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgcttat 352 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 24988 ggtagccatactggaaggtgcggctggatcacctccttttcagggaaagctaatgcttat 25047 Query: 353 gcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctg 412 | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 25048 gtttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgtctg 25107 Query: 413 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatca 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 25108 agctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctcatga 25167 Query: 473 gcttattatcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtc 532 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 25168 gcttattatcctaggtcggaacaaattagttgatagtgataggatcccctttttgacgtc 25227 Query: 533 cccatgtcccccc-----tgtggtgtggcggcatgggggatgtcaaaaggaaagggatgg 587 |||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 25228 cccatgcccccccccccgtgtggtgtggcggcat-ggggatgtcaaaaggaaagggatgg 25286 Query: 588 agtttttctcgctt 601 |||||||||||||| Sbjct: 25287 agtttttctcgctt 25300 Score = 168 bits (85), Expect = 1e-38 Identities = 85/85 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24727 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 24786 Query: 74 aaacccgtcctcagttcggattgca 98 ||||||||||||||||||||||||| Sbjct: 24787 aaacccgtcctcagttcggattgca 24811
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 686 bits (346), Expect = 0.0 Identities = 454/487 (93%), Gaps = 6/487 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 130580 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 130521 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130520 aa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 130462 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 130461 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 130402 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||| Sbjct: 130401 tcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaaggagggggatg 130343 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130342 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 130283 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 130282 ggctggatcacctccttttcagggagagctaatgcttatgcttgttgggtattttggttt 130223 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||| || |||||||||||| |||||| |||||| ||| |||||||||||||| Sbjct: 130222 gacactgcttgacacccaaaaagaagcgagctacatctgagttaagcttggatatggaag 130163 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130162 tcttctttcgtttctcgacggtgaagtaagaccaagcccatgagcttattatcctaggtc 130103 Query: 490 gtaacaa 496 ||||||| Sbjct: 130102 gtaacaa 130096 Score = 686 bits (346), Expect = 0.0 Identities = 454/487 (93%), Gaps = 6/487 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 104342 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 104401 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104402 aa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 104460 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104461 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 104520 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||| Sbjct: 104521 tcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaaggagggggatg 104579 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104580 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 104639 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104640 ggctggatcacctccttttcagggagagctaatgcttatgcttgttgggtattttggttt 104699 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||| || |||||||||||| |||||| |||||| ||| |||||||||||||| Sbjct: 104700 gacactgcttgacacccaaaaagaagcgagctacatctgagttaagcttggatatggaag 104759 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104760 tcttctttcgtttctcgacggtgaagtaagaccaagcccatgagcttattatcctaggtc 104819 Query: 490 gtaacaa 496 ||||||| Sbjct: 104820 gtaacaa 104826
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 676 bits (341), Expect = 0.0 Identities = 382/395 (96%), Gaps = 8/395 (2%) Strand = Plus / Minus Query: 214 atgtttgaagtcattacccttaaccgtaaggagggggatgcctaaggctaggcttgcgac 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33505928 atgtttgaagtcattacccttaaccgtaaggagggggatgcctaaggctaggcttgcgac 33505869 Query: 274 tggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttttc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33505868 tggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttttc 33505809 Query: 334 agggagagctaatgcttatgcttattgggtattttggtttgacacttcttcacgcccaaa 393 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 33505808 agggagagctaatgcttatgcttattgggtattttggtttgacactgcttcacgcccaaa 33505749 Query: 394 aagaaggcagctacgtctgagctaaacttggatatggaagtcttctttcgtttagggtga 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33505748 aagaaggcagctacgtctgagctaaacttggatatggaagtcttctttcgtttagggtga 33505689 Query: 454 agtaagaccaagctcatcagcttattatcctaggtcgtaacaaattagttgatagtgata 513 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 33505688 agtaagaccaagctcatgagcttattatcctaggtcggaacaaattagttgatagtgata 33505629 Query: 514 ggatcccttttttgacgtccccatgtcccccc-------tgtggtgtggcggcatggggg 566 ||||||| ||||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 33505628 ggatcccctttttgacgtccccatgcccccccccccccgtgtggtgtggcggcat-gggg 33505570 Query: 567 atgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||||||||||||||||||||||||| Sbjct: 33505569 atgtcaaaaggaaagggatggagtttttctcgctt 33505535 Score = 238 bits (120), Expect = 2e-59 Identities = 136/140 (97%), Gaps = 1/140 (0%) Strand = Plus / Plus Query: 237 ccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 32745226 ccgtaaggagggg-atgcctaaggctaggcttgggactggagtgaagtcgtaacaaggta 32745284 Query: 297 gccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgctt 356 ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 32745285 gccatactggaaggtgcggctagatcacctccttttcagggagagctaatgcttatgctt 32745344 Query: 357 attgggtattttggtttgac 376 |||||||||||||||||||| Sbjct: 32745345 attgggtattttggtttgac 32745364 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 177 cttgtacacaccgcccgtcacactataggagctggccatgtttgaa 222 |||||||||| | || |||||||||||||||||||||||||||||| Sbjct: 39841164 cttgtacacatcacctgtcacactataggagctggccatgtttgaa 39841119 Score = 65.9 bits (33), Expect = 1e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 143 ggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgtcacactat 202 ||||||||||| ||| |||||||||||| || ||||||||||||||| ||||||||||| Sbjct: 19459240 ggtcagccatatggccgtgaatccgttctcgagccttgtacacaccg-tcgtcacactat 19459182 Query: 203 a 203 | Sbjct: 19459181 a 19459181 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 270 cgactggagtgaagtcgtaacaaggtagccgta 302 ||||||| |||||||||||||||| |||||||| Sbjct: 18621352 cgactggggtgaagtcgtaacaagatagccgta 18621320 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 170 cccgggccttgtacacaccgcccgtcacac 199 |||||||| ||||||||| ||||||||||| Sbjct: 30136034 cccgggccctgtacacactgcccgtcacac 30136005
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 676 bits (341), Expect = 0.0 Identities = 382/395 (96%), Gaps = 8/395 (2%) Strand = Plus / Minus Query: 214 atgtttgaagtcattacccttaaccgtaaggagggggatgcctaaggctaggcttgcgac 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51125 atgtttgaagtcattacccttaaccgtaaggagggggatgcctaaggctaggcttgcgac 51066 Query: 274 tggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttttc 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51065 tggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctccttttc 51006 Query: 334 agggagagctaatgcttatgcttattgggtattttggtttgacacttcttcacgcccaaa 393 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 51005 agggagagctaatgcttatgcttattgggtattttggtttgacactgcttcacgcccaaa 50946 Query: 394 aagaaggcagctacgtctgagctaaacttggatatggaagtcttctttcgtttagggtga 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50945 aagaaggcagctacgtctgagctaaacttggatatggaagtcttctttcgtttagggtga 50886 Query: 454 agtaagaccaagctcatcagcttattatcctaggtcgtaacaaattagttgatagtgata 513 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 50885 agtaagaccaagctcatgagcttattatcctaggtcggaacaaattagttgatagtgata 50826 Query: 514 ggatcccttttttgacgtccccatgtcccccc-------tgtggtgtggcggcatggggg 566 ||||||| ||||||||||||||||| |||||| |||||||||||||||| |||| Sbjct: 50825 ggatcccctttttgacgtccccatgcccccccccccccgtgtggtgtggcggcat-gggg 50767 Query: 567 atgtcaaaaggaaagggatggagtttttctcgctt 601 ||||||||||||||||||||||||||||||||||| Sbjct: 50766 atgtcaaaaggaaagggatggagtttttctcgctt 50732
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135507 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 135448 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135447 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 135388 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135387 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 135328 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 135327 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 135269 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135268 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 135209 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 135208 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 135155 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 135154 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 135095 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 135094 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 135035 Query: 490 gtaacaa 496 | ||||| Sbjct: 135034 ggaacaa 135028 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101371 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 101430 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101431 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 101490 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101491 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 101550 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 101551 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 101609 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101610 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 101669 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 101670 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 101723 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 101724 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 101783 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 101784 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 101843 Query: 490 gtaacaa 496 | ||||| Sbjct: 101844 ggaacaa 101850
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 134237 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 134178 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134177 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 134118 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134117 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 134058 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 134057 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 133999 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133998 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 133939 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 133938 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 133885 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 133884 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 133825 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 133824 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 133765 Query: 490 gtaacaa 496 | ||||| Sbjct: 133764 ggaacaa 133758 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 100398 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 100457 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100458 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 100517 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100518 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 100577 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 100578 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 100636 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100637 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 100696 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 100697 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 100750 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 100751 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 100810 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 100811 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 100870 Query: 490 gtaacaa 496 | ||||| Sbjct: 100871 ggaacaa 100877
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 143093 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 143034 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 143033 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 142974 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142973 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 142914 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 142913 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 142855 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142854 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 142795 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 142794 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 142741 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 || ||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 142740 gatactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttggagatggaag 142681 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| Sbjct: 142680 tcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattatcctaggtc 142621 Query: 490 gtaacaa 496 | ||||| Sbjct: 142620 ggaacaa 142614 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106967 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 107026 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107027 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 107086 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107087 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 107146 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 107147 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 107205 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107206 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 107265 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 107266 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 107319 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 || ||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 107320 gatactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttggagatggaag 107379 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| Sbjct: 107380 tcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattatcctaggtc 107439 Query: 490 gtaacaa 496 | ||||| Sbjct: 107440 ggaacaa 107446 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| ||||||||||||||| Sbjct: 142611 tgataggatccccttttttacgtccccatgtccc 142578 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| ||||||||||||||| Sbjct: 107449 tgataggatccccttttttacgtccccatgtccc 107482
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 137706 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 137647 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 137646 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 137587 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 137586 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 137527 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 137526 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 137468 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137467 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 137408 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 137407 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 137354 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| |||||||||||| |||| |||||| ||||||| Sbjct: 137353 gacactgcttcacacccaaaaagaagcgagctacgtctgaactaagcttggagatggaag 137294 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| Sbjct: 137293 tcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattatcctaggtc 137234 Query: 490 gtaacaa 496 | ||||| Sbjct: 137233 ggaacaa 137227 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102576 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 102635 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102636 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 102695 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102696 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 102755 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 102756 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 102814 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102815 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 102874 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 102875 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 102928 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| |||||||||||| |||| |||||| ||||||| Sbjct: 102929 gacactgcttcacacccaaaaagaagcgagctacgtctgaactaagcttggagatggaag 102988 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||| Sbjct: 102989 tcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattatcctaggtc 103048 Query: 490 gtaacaa 496 | ||||| Sbjct: 103049 ggaacaa 103055 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatg 538 |||||||||||| ||||| ||||||||||| Sbjct: 137224 tgataggatccccttttttacgtccccatg 137195 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatg 538 |||||||||||| ||||| ||||||||||| Sbjct: 103058 tgataggatccccttttttacgtccccatg 103087
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135500 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 135441 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135440 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 135381 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135380 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 135321 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 135320 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 135262 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135261 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 135202 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 135201 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 135148 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 135147 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 135088 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 135087 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 135028 Query: 490 gtaacaa 496 | ||||| Sbjct: 135027 ggaacaa 135021 Score = 664 bits (335), Expect = 0.0 Identities = 450/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101369 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 101428 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101429 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 101488 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101489 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 101548 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 101549 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 101607 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101608 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 101667 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 101668 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 101721 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 101722 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 101781 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 101782 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 101841 Query: 490 gtaacaa 496 | ||||| Sbjct: 101842 ggaacaa 101848
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 656 bits (331), Expect = 0.0 Identities = 449/487 (92%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 5381 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 5440 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5441 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 5500 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5501 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 5560 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 5561 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 5619 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5620 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 5679 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 5680 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 5733 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 5734 gacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaag 5793 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||||||||||| ||||||||||| ||||| Sbjct: 5794 tcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggtc 5853 Query: 490 gtaacaa 496 | ||||| Sbjct: 5854 ggaacaa 5860
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 648 bits (327), Expect = 0.0 Identities = 448/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 138503 acacgtgctacaatggccgggacaaagggtcgtgatcccgcgagggtgagctaactccaa 138444 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 138443 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 138384 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138383 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138324 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138323 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 138265 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138264 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 138205 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 138204 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 138151 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 138150 gacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttggagatggaag 138091 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 138090 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 138031 Query: 490 gtaacaa 496 | ||||| Sbjct: 138030 ggaacaa 138024 Score = 648 bits (327), Expect = 0.0 Identities = 448/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 103406 acacgtgctacaatggccgggacaaagggtcgtgatcccgcgagggtgagctaactccaa 103465 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 103466 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 103525 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103526 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103585 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103586 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103644 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103645 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103704 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103705 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103758 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 103759 gacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttggagatggaag 103818 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 103819 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 103878 Query: 490 gtaacaa 496 | ||||| Sbjct: 103879 ggaacaa 103885 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| |||||||| |||||| Sbjct: 138021 tgataggatccccttttttacgtccccgtgtccc 137988 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| |||||||| |||||| Sbjct: 103888 tgataggatccccttttttacgtccccgtgtccc 103921
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 648 bits (327), Expect = 0.0 Identities = 448/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 139314 acacgtgctacaatggccgggacaaagggccgcgatcccgcgagggtgagctaactccaa 139255 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139254 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 139195 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139194 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 139135 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 139134 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 139076 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139075 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 139016 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| ||| || |||||||||||||||| Sbjct: 139015 ggctggatcacctccttttcagggagagcta------atgtttgttgggtattttggttt 138962 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 138961 gacactgcttcacacccaaaaagaagggagctacgtctgagtgaaacttggagatggaag 138902 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 138901 tcttctttcgtttctcgatggtgaagtaagaccaagctcatgagcttattatcccaggtc 138842 Query: 490 gtaacaa 496 | ||||| Sbjct: 138841 ggaacaa 138835 Score = 648 bits (327), Expect = 0.0 Identities = 448/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 103111 acacgtgctacaatggccgggacaaagggccgcgatcccgcgagggtgagctaactccaa 103170 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103171 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 103230 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103231 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103290 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103291 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103349 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103350 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103409 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| ||| || |||||||||||||||| Sbjct: 103410 ggctggatcacctccttttcagggagagcta------atgtttgttgggtattttggttt 103463 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct: 103464 gacactgcttcacacccaaaaagaagggagctacgtctgagtgaaacttggagatggaag 103523 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | |||||||||||||||||||||| |||||||||||| ||||| Sbjct: 103524 tcttctttcgtttctcgatggtgaagtaagaccaagctcatgagcttattatcccaggtc 103583 Query: 490 gtaacaa 496 | ||||| Sbjct: 103584 ggaacaa 103590 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||||||| ||||| ||||||||||| |||||| Sbjct: 138832 tgataggatccccttttttacgtccccatgccccccc 138796 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||||||| ||||| ||||||||||| |||||| Sbjct: 103593 tgataggatccccttttttacgtccccatgccccccc 103629
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 648 bits (327), Expect = 0.0 Identities = 448/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 138778 acacgtgctacaatggccgggacaaagggtcgtgatcccgcgagggtgagctaactccaa 138719 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 138718 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 138659 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138658 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138599 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138598 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 138540 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138539 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 138480 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 138479 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 138426 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 138425 gacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttggagatggaag 138366 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 138365 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 138306 Query: 490 gtaacaa 496 | ||||| Sbjct: 138305 ggaacaa 138299 Score = 648 bits (327), Expect = 0.0 Identities = 448/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 103629 acacgtgctacaatggccgggacaaagggtcgtgatcccgcgagggtgagctaactccaa 103688 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 103689 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 103748 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103749 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103808 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103809 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103867 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103868 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103927 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103928 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103981 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 103982 gacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttggagatggaag 104041 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 104042 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 104101 Query: 490 gtaacaa 496 | ||||| Sbjct: 104102 ggaacaa 104108 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| |||||||| |||||| Sbjct: 138296 tgataggatccccttttttacgtccccgtgtccc 138263 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| |||||||| |||||| Sbjct: 104111 tgataggatccccttttttacgtccccgtgtccc 104144
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 642 bits (324), Expect = 0.0 Identities = 448/488 (91%), Gaps = 11/488 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 43498 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 43557 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 43558 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 43617 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 43618 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 43677 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 43678 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 43736 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43737 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 43796 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 43797 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 43850 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| ||| |||||||| ||||||||||||| |||||||||| ||||||| Sbjct: 43851 gacactgcttcacaccccaaaagaagcaagctacgtctgagttaaacttggagatggaag 43910 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 43911 tcttctttcgtttctcggcggtgaagtaagaccaagctcatgggcttattatcctaggtc 43970 Query: 490 gtaacaaa 497 | |||||| Sbjct: 43971 ggaacaaa 43978
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 640 bits (323), Expect = e-180 Identities = 447/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142264 acacgtgctacaatggacgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 142205 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142204 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 142145 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142144 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 142085 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 142084 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 142026 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142025 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 141966 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 141965 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 141912 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| |||||||||||| ||||||||| ||||||| Sbjct: 141911 gacactgcttcacacccaaaaagaagcgagctacgtctgaatgaaacttggagatggaag 141852 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||||||| | |||||||||||||||||| ||| |||||||||||||||||| Sbjct: 141851 ccttctttcgtttctcgacggtgaagtaagaccaagcccatgagcttattatcctaggtc 141792 Query: 490 gtaacaa 496 | ||||| Sbjct: 141791 ggaacaa 141785 Score = 640 bits (323), Expect = e-180 Identities = 447/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106833 acacgtgctacaatggacgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 106892 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106893 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 106952 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106953 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 107012 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 107013 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 107071 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107072 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 107131 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 107132 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 107185 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| |||||||||||| ||||||||| ||||||| Sbjct: 107186 gacactgcttcacacccaaaaagaagcgagctacgtctgaatgaaacttggagatggaag 107245 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||||||| | |||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107246 ccttctttcgtttctcgacggtgaagtaagaccaagcccatgagcttattatcctaggtc 107305 Query: 490 gtaacaa 496 | ||||| Sbjct: 107306 ggaacaa 107312
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138694 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138635 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138634 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 138575 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138574 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138515 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138514 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 138456 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138455 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 138396 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 138395 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 138342 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 138341 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 138282 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 138281 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 138222 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 138221 aggtcggaacaa 138210 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103936 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103995 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103996 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 104055 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104056 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 104115 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 104116 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 104174 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104175 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 104234 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 104235 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 104288 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 104289 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 104348 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 104349 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 104408 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 104409 aggtcggaacaa 104420 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 138207 tgataggacccccttttttacgtccccatgttccccc 138171 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 104423 tgataggacccccttttttacgtccccatgttccccc 104459
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138056 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 137997 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 137996 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 137937 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 137936 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 137877 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 137876 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 137818 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137817 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 137758 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 137757 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 137704 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 137703 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 137644 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 137643 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 137584 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 137583 aggtcggaacaa 137572 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 102980 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103039 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103040 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 103099 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103100 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103159 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103160 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103218 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103219 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103278 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103279 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103332 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 103333 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 103392 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 103393 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 103452 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 103453 aggtcggaacaa 103464 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||||||| ||||| ||||||| |||| ||||| Sbjct: 137569 tgataggatccccttttttacgtccctatgttccccc 137533 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||||||| ||||| ||||||| |||| ||||| Sbjct: 103467 tgataggatccccttttttacgtccctatgttccccc 103503
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138192 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138133 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138132 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 138073 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138072 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138013 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138012 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 137954 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137953 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 137894 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 137893 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 137840 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 137839 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 137780 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 137779 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 137720 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 137719 aggtcggaacaa 137708 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103151 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103210 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103211 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 103270 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103271 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103330 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103331 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103389 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103390 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103449 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103450 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103503 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 103504 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 103563 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 103564 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 103623 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 103624 aggtcggaacaa 103635
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138190 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138131 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138130 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 138071 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138070 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138011 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138010 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 137952 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137951 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 137892 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 137891 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 137838 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 137837 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 137778 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 137777 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 137718 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 137717 aggtcggaacaa 137706 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103148 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103208 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 103267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103268 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103328 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103387 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103446 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103447 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103500 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 103501 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 103560 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 103561 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 103620 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 103621 aggtcggaacaa 103632
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138101 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138042 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138041 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 137982 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 137981 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 137922 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 137921 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 137863 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137862 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 137803 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 137802 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 137749 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 137748 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 137689 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 137688 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 137629 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 137628 aggtcggaacaa 137617 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103027 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103086 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103087 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 103146 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103147 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103206 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103207 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103265 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103266 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103325 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103326 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103379 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 103380 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 103439 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 103440 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 103499 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 103500 aggtcggaacaa 103511
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138692 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138633 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138632 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 138573 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138572 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138513 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138512 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 138454 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138453 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 138394 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 138393 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 138340 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 138339 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 138280 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 138279 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 138220 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 138219 aggtcggaacaa 138208 Score = 634 bits (320), Expect = e-179 Identities = 450/492 (91%), Gaps = 16/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103934 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103993 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103994 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 104053 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104054 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 104113 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 104114 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 104172 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104173 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 104232 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 104233 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 104286 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 104287 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 104346 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 104347 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 104406 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 104407 aggtcggaacaa 104418 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 138205 tgataggacccccttttttacgtccccatgttccccc 138169 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 104421 tgataggacccccttttttacgtccccatgttccccc 104457
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 630 bits (318), Expect = e-177 Identities = 450/493 (91%), Gaps = 17/493 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 139314 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 139255 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139254 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 139195 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139194 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 139135 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 139134 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 139076 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139075 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 139016 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 139015 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 138962 Query: 374 gacacttcttcacgccc------aaaaagaaggcagctacgtctgagctaaacttggata 427 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| | Sbjct: 138961 gacactgcttcacacccccaaaaaaaaagaagggagctacgtctgagttaaacttggaga 138902 Query: 428 tggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcc 483 ||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| Sbjct: 138901 tggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcc 138842 Query: 484 taggtcgtaacaa 496 ||||||| ||||| Sbjct: 138841 taggtcggaacaa 138829 Score = 630 bits (318), Expect = e-177 Identities = 450/493 (91%), Gaps = 17/493 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 104243 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 104302 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104303 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 104362 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104363 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 104422 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 104423 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 104481 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 104541 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 104542 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 104595 Query: 374 gacacttcttcacgccc------aaaaagaaggcagctacgtctgagctaaacttggata 427 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| | Sbjct: 104596 gacactgcttcacacccccaaaaaaaaagaagggagctacgtctgagttaaacttggaga 104655 Query: 428 tggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcc 483 ||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| Sbjct: 104656 tggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcc 104715 Query: 484 taggtcgtaacaa 496 ||||||| ||||| Sbjct: 104716 taggtcggaacaa 104728 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 138826 tgataggacccccttttttacgtccccatgttccccc 138790 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 104731 tgataggacccccttttttacgtccccatgttccccc 104767
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 630 bits (318), Expect = e-177 Identities = 318/318 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1165 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1224 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1225 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1284 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1285 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1344 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1345 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1404 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1405 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1464 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1465 ggctggatcacctccttt 1482
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 630 bits (318), Expect = e-177 Identities = 318/318 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1225 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1285 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1286 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1345 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1405 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1406 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1465 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1466 ggctggatcacctccttt 1483
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 630 bits (318), Expect = e-177 Identities = 318/318 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1225 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1285 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1286 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1345 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1405 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1406 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1465 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1466 ggctggatcacctccttt 1483
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 630 bits (318), Expect = e-177 Identities = 318/318 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1225 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1226 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1285 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1286 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1345 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1346 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1405 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1406 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1465 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1466 ggctggatcacctccttt 1483
>dbj|AK060734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A10, full insert sequence Length = 1950 Score = 626 bits (316), Expect = e-176 Identities = 316/316 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 86 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 146 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 206 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 266 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 326 Query: 314 ggctggatcacctcct 329 |||||||||||||||| Sbjct: 327 ggctggatcacctcct 342
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 624 bits (315), Expect = e-176 Identities = 445/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 136463 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 136404 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136403 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 136344 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 136343 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 136284 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 136283 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 136225 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136224 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 136165 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 136164 ggctggatcacctccttttcagggagagcta------atgcttcttgggtatttaggttt 136111 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 ||||| |||||| ||||||||||||| ||||||||||||| |||||||||| |||||| Sbjct: 136110 gacacagcttcacacccaaaaagaagggagctacgtctgagttaaacttggaggtggaag 136051 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||||||| | |||||||||||||||| | ||| |||||||||||||||||| Sbjct: 136050 ccttctttcgtttctcgacggtgaagtaagaccaaacccatgagcttattatcctaggtc 135991 Query: 490 gtaacaa 496 | ||||| Sbjct: 135990 ggaacaa 135984 Score = 624 bits (315), Expect = e-176 Identities = 445/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 102186 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 102245 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102246 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 102305 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 102306 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 102365 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 102366 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 102424 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102425 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 102484 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||| Sbjct: 102485 ggctggatcacctccttttcagggagagcta------atgcttcttgggtatttaggttt 102538 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 ||||| |||||| ||||||||||||| ||||||||||||| |||||||||| |||||| Sbjct: 102539 gacacagcttcacacccaaaaagaagggagctacgtctgagttaaacttggaggtggaag 102598 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||||||| | |||||||||||||||| | ||| |||||||||||||||||| Sbjct: 102599 ccttctttcgtttctcgacggtgaagtaagaccaaacccatgagcttattatcctaggtc 102658 Query: 490 gtaacaa 496 | ||||| Sbjct: 102659 ggaacaa 102665
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 624 bits (315), Expect = e-176 Identities = 445/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142444 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 142385 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142384 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 142325 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142324 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 142265 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 142264 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 142206 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142205 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 142146 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 142145 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 142092 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||| | ||| || |||||||||| | |||||| |||||| | |||||||| ||||||| Sbjct: 142091 gacattgctttacacccaaaaagaggcgagctacatctgagttcaacttggagatggaag 142032 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 || |||||||||| | |||||||||||||||||||||| |||||||||||||||||| Sbjct: 142031 tcctctttcgtttctggacggtgaagtaagaccaagctcatgagcttattatcctaggtc 141972 Query: 490 gtaacaa 496 | ||||| Sbjct: 141971 ggaacaa 141965 Score = 624 bits (315), Expect = e-176 Identities = 445/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 106855 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 106914 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106915 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 106974 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 106975 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 107034 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 107035 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 107093 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107094 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 107153 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 107154 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 107207 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||| | ||| || |||||||||| | |||||| |||||| | |||||||| ||||||| Sbjct: 107208 gacattgctttacacccaaaaagaggcgagctacatctgagttcaacttggagatggaag 107267 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 || |||||||||| | |||||||||||||||||||||| |||||||||||||||||| Sbjct: 107268 tcctctttcgtttctggacggtgaagtaagaccaagctcatgagcttattatcctaggtc 107327 Query: 490 gtaacaa 496 | ||||| Sbjct: 107328 ggaacaa 107334 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatg 538 |||||||||||| ||||||||||||||||| Sbjct: 141962 tgataggatcccctttttgacgtccccatg 141933 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatg 538 |||||||||||| ||||||||||||||||| Sbjct: 107337 tgataggatcccctttttgacgtccccatg 107366
>gb|DQ490950.1| Festuca arundinacea 16S ribosomal RNA gene, partial sequence; chloroplast Length = 812 Score = 622 bits (314), Expect = e-175 Identities = 317/318 (99%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 259 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 199 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 139 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 79 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 19 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 18 ggctggatcacctccttt 1
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 622 bits (314), Expect = e-175 Identities = 444/486 (91%), Gaps = 16/486 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138070 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138011 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 138010 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcca 137951 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 137950 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 137891 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 137890 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 137832 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137831 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 137772 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 137771 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 137718 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 137717 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 137658 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 137657 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 137598 Query: 485 aggtcg 490 |||||| Sbjct: 137597 aggtcg 137592 Score = 622 bits (314), Expect = e-175 Identities = 444/486 (91%), Gaps = 16/486 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 102992 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103051 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 103052 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcca 103111 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103112 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103171 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103172 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103230 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103231 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 103290 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 103291 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 103344 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 103345 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 103404 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 103405 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 103464 Query: 485 aggtcg 490 |||||| Sbjct: 103465 aggtcg 103470
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 618 bits (312), Expect = e-174 Identities = 449/492 (91%), Gaps = 17/492 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 2387 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagg-tgagctaaccccaa 2329 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2328 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 2269 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2268 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 2209 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 2208 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 2150 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2149 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2090 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 2089 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 2036 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 2035 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 1976 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 1975 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 1916 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 1915 aggtcggaacaa 1904
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 618 bits (312), Expect = e-174 Identities = 449/492 (91%), Gaps = 17/492 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 2399 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagg-tgagctaaccccaa 2457 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2458 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 2517 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2518 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 2577 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 2578 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 2636 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2637 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2696 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 2697 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 2750 Query: 374 gacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatat 428 |||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| || Sbjct: 2751 gacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttggagat 2810 Query: 429 ggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcct 484 |||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||| Sbjct: 2811 ggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcct 2870 Query: 485 aggtcgtaacaa 496 |||||| ||||| Sbjct: 2871 aggtcggaacaa 2882 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 2885 tgataggacccccttttttacgtccccatgttccccc 2921
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 617 bits (311), Expect = e-173 Identities = 444/487 (91%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1350 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 1409 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 1410 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 1469 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1470 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1529 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| |||||||| ||||||||||||| Sbjct: 1530 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccacaaggagggggatg 1588 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1589 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1648 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| | |||| |||||||||||||||| Sbjct: 1649 ggctggatcacctccttttcagggagagcta------acgcttgttgggtattttggttt 1702 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| ||||||||||| | |||||||||| ||||||| Sbjct: 1703 gacactgcttcacacccaaaaagaagcgagctacgtctgggttaaacttggagatggaag 1762 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 1763 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattttcctaggtc 1822 Query: 490 gtaacaa 496 | ||||| Sbjct: 1823 ggaacaa 1829
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 615 bits (310), Expect = e-173 Identities = 443/486 (91%), Gaps = 16/486 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 136958 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggtgagctaaccccaa 136899 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136898 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 136839 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 136838 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 136779 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 136778 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 136720 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136719 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 136660 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 136659 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 136606 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 ||||| |||||| |||||||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 136605 tacactgcttcacacccaaaaagaagcgagctacgtctgagctaagcttggagatggaag 136546 Query: 434 tcttctttcgttt----agggtgaagta-----agaccaagctcatcagcttattatcct 484 ||||||||||||| | ||||||||| ||||||||||||| ||||||||||||| Sbjct: 136545 tcttctttcgtttctcgacggtgaagtaagaccagaccaagctcatgagcttattatcct 136486 Query: 485 aggtcg 490 |||||| Sbjct: 136485 aggtcg 136480 Score = 615 bits (310), Expect = e-173 Identities = 443/486 (91%), Gaps = 16/486 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 101013 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggtgagctaaccccaa 101072 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101073 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 101132 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 101133 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 101192 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 101193 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 101251 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101252 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 101311 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 101312 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 101365 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 ||||| |||||| |||||||||||| ||||||||||||||||| |||||| ||||||| Sbjct: 101366 tacactgcttcacacccaaaaagaagcgagctacgtctgagctaagcttggagatggaag 101425 Query: 434 tcttctttcgttt----agggtgaagta-----agaccaagctcatcagcttattatcct 484 ||||||||||||| | ||||||||| ||||||||||||| ||||||||||||| Sbjct: 101426 tcttctttcgtttctcgacggtgaagtaagaccagaccaagctcatgagcttattatcct 101485 Query: 485 aggtcg 490 |||||| Sbjct: 101486 aggtcg 101491
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 615 bits (310), Expect = e-173 Identities = 448/493 (90%), Gaps = 17/493 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 138433 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 138374 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138373 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 138314 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 138313 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 138254 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 138253 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 138195 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138194 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 138135 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| Sbjct: 138134 ggctggatcacctccttttcagggagagcta------atgcttgttgggtgttttggttt 138081 Query: 374 gacacttcttcacgccc------aaaaagaaggcagctacgtctgagctaaacttggata 427 |||||| |||||| ||| |||||||||| || |||||||||| |||||||||| | Sbjct: 138080 gacactgcttcacaccccccaaaaaaaagaagggagttacgtctgagttaaacttggaga 138021 Query: 428 tggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcc 483 ||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| Sbjct: 138020 tggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcc 137961 Query: 484 taggtcgtaacaa 496 ||||||| ||||| Sbjct: 137960 taggtcggaacaa 137948 Score = 615 bits (310), Expect = e-173 Identities = 448/493 (90%), Gaps = 17/493 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 103705 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 103764 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103765 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 103824 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 103825 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 103884 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 103885 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 103943 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 104003 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||| ||||||||| Sbjct: 104004 ggctggatcacctccttttcagggagagcta------atgcttgttgggtgttttggttt 104057 Query: 374 gacacttcttcacgccc------aaaaagaaggcagctacgtctgagctaaacttggata 427 |||||| |||||| ||| |||||||||| || |||||||||| |||||||||| | Sbjct: 104058 gacactgcttcacaccccccaaaaaaaagaagggagttacgtctgagttaaacttggaga 104117 Query: 428 tggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcc 483 ||||||||||||||| ||| | |||||||||||||||||||||| |||||||||||| Sbjct: 104118 tggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattatcc 104177 Query: 484 taggtcgtaacaa 496 ||||||| ||||| Sbjct: 104178 taggtcggaacaa 104190 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 137945 tgataggacccccttttttacgtccccatgttccccc 137909 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 104193 tgataggacccccttttttacgtccccatgttccccc 104229
>gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete sequence; 16S ribosomal RNA gene, complete sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 5206 Score = 613 bits (309), Expect = e-172 Identities = 450/495 (90%), Gaps = 19/495 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2788 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 2847 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2848 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 2907 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggc---cttgtacacaccgc 190 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 2908 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttcttgtacacaccgc 2967 Query: 191 ccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggaggggg 250 |||||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| Sbjct: 2968 ccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggg 3026 Query: 251 atgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaagg 310 ||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 3027 atgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaagg 3086 Query: 311 tgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttgg 370 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 3087 tgcggctggatcacctccttttcagggagagcta------atgcttgttgggtattttgg 3140 Query: 371 tttgacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttgga 425 ||||||||| |||||| ||| |||||||||| ||||||||||||| |||||||||| Sbjct: 3141 tttgacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaaacttgga 3200 Query: 426 tatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattat 481 |||||||||||||||| ||| | |||||||||||||||||||||| |||||||||| Sbjct: 3201 gatggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagcttattat 3260 Query: 482 cctaggtcgtaacaa 496 ||||||||| ||||| Sbjct: 3261 cctaggtcggaacaa 3275
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 609 bits (307), Expect = e-171 Identities = 444/487 (91%), Gaps = 12/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 144869 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 144810 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 144809 aa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 144751 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144750 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 144691 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 144690 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 144632 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144631 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 144572 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 144571 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 144518 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 ||||| |||||| ||||||||| || ||| ||||||||||||| |||||| ||||||| Sbjct: 144517 gacaccgcttcacacccaaaaaggagcaagccacgtctgagctaagcttggagatggaag 144458 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||| |||| | ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 144457 tcttcttttgtttctcgacggtgaagtaagaccaagtccatgagcttattatcctaggtc 144398 Query: 490 gtaacaa 496 | ||||| Sbjct: 144397 ggaacaa 144391 Score = 609 bits (307), Expect = e-171 Identities = 444/487 (91%), Gaps = 12/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 108788 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 108847 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108848 aa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 108906 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 108907 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 108966 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 108967 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 109025 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109026 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 109085 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 109086 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 109139 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 ||||| |||||| ||||||||| || ||| ||||||||||||| |||||| ||||||| Sbjct: 109140 gacaccgcttcacacccaaaaaggagcaagccacgtctgagctaagcttggagatggaag 109199 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||| |||| | ||||||||||||||||| ||| |||||||||||||||||| Sbjct: 109200 tcttcttttgtttctcgacggtgaagtaagaccaagtccatgagcttattatcctaggtc 109259 Query: 490 gtaacaa 496 | ||||| Sbjct: 109260 ggaacaa 109266 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| ||||||||||||||| Sbjct: 144388 tgataggatccccttttttacgtccccatgtccc 144355 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| ||||||||||||||| Sbjct: 109269 tgataggatccccttttttacgtccccatgtccc 109302
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 605 bits (305), Expect = e-170 Identities = 434/475 (91%), Gaps = 14/475 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 2576 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 2517 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2516 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 2457 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 2456 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 2397 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 2396 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 2338 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2337 ccgaaggtagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2278 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 2277 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 2224 Query: 374 gacacttcttcacgccc---aaaaagaaggcagctacgtctgagctaaacttggatatgg 430 |||||| |||||| ||| |||||||||| |||||| ||||| |||||||||| |||| Sbjct: 2223 gacactgcttcacaccccaaaaaaagaagggggctacgcctgagttaaacttggagatgg 2164 Query: 431 aagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattat 481 |||||||||||||||| | |||||||||||||||||||||| |||||||||| Sbjct: 2163 aagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattat 2109 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccctgtgg 550 |||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct: 2084 tgataggatccccttttttacgtccccatgccccccgtgtgg 2043
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 605 bits (305), Expect = e-170 Identities = 446/489 (91%), Gaps = 18/489 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 142198 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 142139 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142138 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 142079 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 142078 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 142019 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||| Sbjct: 142018 tcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaaggagggggatg 141960 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141959 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 141900 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||| ||||||| Sbjct: 141899 ggctggatcacctccttttcagggagagcta------atgcttgttgg-----ttggttt 141851 Query: 374 gacacttcttcacgcccaaaaagaag-gc-agctacgtctgagctaaacttggatatgga 431 |||||| |||||| |||||||||||| || ||| ||||||||||||| |||||| ||||| Sbjct: 141850 gacactgcttcacacccaaaaagaagagcgagccacgtctgagctaagcttggagatgga 141791 Query: 432 agtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctagg 487 ||||||||||||||| | ||||||||||||||||| |||| |||||||||||||||| Sbjct: 141790 agtcttctttcgtttctcgacggtgaagtaagaccaagttcatgagcttattatcctagg 141731 Query: 488 tcgtaacaa 496 ||| ||||| Sbjct: 141730 tcggaacaa 141722 Score = 605 bits (305), Expect = e-170 Identities = 446/489 (91%), Gaps = 18/489 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107747 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 107806 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107807 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 107866 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107867 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 107926 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||| Sbjct: 107927 tcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaaggagggggatg 107985 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107986 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 108045 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||| ||||||| Sbjct: 108046 ggctggatcacctccttttcagggagagcta------atgcttgttgg-----ttggttt 108094 Query: 374 gacacttcttcacgcccaaaaagaag-gc-agctacgtctgagctaaacttggatatgga 431 |||||| |||||| |||||||||||| || ||| ||||||||||||| |||||| ||||| Sbjct: 108095 gacactgcttcacacccaaaaagaagagcgagccacgtctgagctaagcttggagatgga 108154 Query: 432 agtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctagg 487 ||||||||||||||| | ||||||||||||||||| |||| |||||||||||||||| Sbjct: 108155 agtcttctttcgtttctcgacggtgaagtaagaccaagttcatgagcttattatcctagg 108214 Query: 488 tcgtaacaa 496 ||| ||||| Sbjct: 108215 tcggaacaa 108223 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 509 tgataggatcccttttttgacgtccccatgtcccccctg 547 |||||||||||| ||||| ||||||||||||||| |||| Sbjct: 141719 tgataggatccccttttttacgtccccatgtccctcctg 141681 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccctg 547 |||||||||||| ||||| ||||||||||||||| |||| Sbjct: 108226 tgataggatccccttttttacgtccccatgtccctcctg 108264
>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full insert sequence Length = 1602 Score = 599 bits (302), Expect = e-168 Identities = 305/306 (99%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 894 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 caacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 954 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1014 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1074 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1075 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1134 Query: 314 ggctgg 319 |||||| Sbjct: 1135 ggctgg 1140
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 593 bits (299), Expect = e-166 Identities = 441/487 (90%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134618 acacgtgctacaatggacgggacaaaggatcgcgatcccgcgagggtgagctaactccaa 134559 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 134558 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 134499 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134498 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 134439 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 134438 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 134380 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134379 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 134320 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||| Sbjct: 134319 ggctggatcacctccttttcagggagagcta------atgcttgttgggtagtttagttt 134266 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| || || ||||||| ||| ||||| ||||||| Sbjct: 134265 gacactgcttcacacccaaaaagaagcgagttatgtctgagtcaaatttggagatggaag 134206 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 134205 tcttctttcgtttctcgatggtgaagtaagactaaactcatgagcttattatcctaggtc 134146 Query: 490 gtaacaa 496 | ||||| Sbjct: 134145 ggaacaa 134139 Score = 593 bits (299), Expect = e-166 Identities = 441/487 (90%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 100776 acacgtgctacaatggacgggacaaaggatcgcgatcccgcgagggtgagctaactccaa 100835 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 100836 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 100895 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 100896 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 100955 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 100956 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 101014 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101015 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 101074 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| ||||||| ||| |||| Sbjct: 101075 ggctggatcacctccttttcagggagagcta------atgcttgttgggtagtttagttt 101128 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| || || ||||||| ||| ||||| ||||||| Sbjct: 101129 gacactgcttcacacccaaaaagaagcgagttatgtctgagtcaaatttggagatggaag 101188 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| || ||||| |||||||||||||||||| Sbjct: 101189 tcttctttcgtttctcgatggtgaagtaagactaaactcatgagcttattatcctaggtc 101248 Query: 490 gtaacaa 496 | ||||| Sbjct: 101249 ggaacaa 101255
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 589 bits (297), Expect = e-165 Identities = 433/475 (91%), Gaps = 15/475 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 1564 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgaggttgagctaaccccaa 1623 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1624 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1683 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1684 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1743 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1744 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1802 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1803 ccgaaggtagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1862 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 1863 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 1916 Query: 374 gacacttcttcacgccc---aaaaagaaggcagctacgtctgagctaaacttggatatgg 430 |||||| |||||| ||| |||||||||| |||||| ||||| |||||||||| |||| Sbjct: 1917 gacactgcttcacaccccaaaaaaagaagg-ggctacgcctgagttaaacttggagatgg 1975 Query: 431 aagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattat 481 |||||||||||||||| | |||||||||||||||||||||| |||||||||| Sbjct: 1976 aagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattat 2030
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 585 bits (295), Expect = e-164 Identities = 440/487 (90%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| | |||||| |||||||||||||||||||||| Sbjct: 133033 acacgtgctacaatggccgggacaaaggattgcgatcccgcgagggtgagctaactccaa 132974 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 132973 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 132914 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132913 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 132854 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 132853 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 132795 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132794 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 132735 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||| Sbjct: 132734 ggctggatcacctccttttcagggagatcta------atgctttttgggtagtttggttt 132681 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| || ||||||||| | ||||||||||| ||| ||||| ||||||| Sbjct: 132680 gacactgcttcacacctaaaaagaagcgaactacgtctgagtcaaatttggagatggaag 132621 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 132620 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 132561 Query: 490 gtaacaa 496 | ||||| Sbjct: 132560 ggaacaa 132554 Score = 585 bits (295), Expect = e-164 Identities = 440/487 (90%), Gaps = 11/487 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| | |||||| |||||||||||||||||||||| Sbjct: 99423 acacgtgctacaatggccgggacaaaggattgcgatcccgcgagggtgagctaactccaa 99482 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 99483 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 99542 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99543 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 99602 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 99603 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 99661 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99662 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 99721 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||| Sbjct: 99722 ggctggatcacctccttttcagggagatcta------atgctttttgggtagtttggttt 99775 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| || ||||||||| | ||||||||||| ||| ||||| ||||||| Sbjct: 99776 gacactgcttcacacctaaaaagaagcgaactacgtctgagtcaaatttggagatggaag 99835 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 99836 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 99895 Query: 490 gtaacaa 496 | ||||| Sbjct: 99896 ggaacaa 99902
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 569 bits (287), Expect = e-159 Identities = 438/487 (89%), Gaps = 11/487 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| | |||||| |||||||| ||||||||||||| Sbjct: 49778 acacgtgctacaatggccgggacaaaggattgcgatcccgcgagggcgagctaactccaa 49719 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 49718 aaactcgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 49659 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 49658 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 49599 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 49598 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 49540 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 49539 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 49480 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||| Sbjct: 49479 ggctggatcacctccttttcagggagatcta------atgctttttgggtagtttggttt 49426 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| || ||||||||| | ||||||||||| ||| ||||| ||||||| Sbjct: 49425 gacactgcttcacacctaaaaagaagcgaactacgtctgagtcaaatttggagatggaag 49366 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 ||||||||||||| | ||||||||||||| |||||||| |||||||||||||||||| Sbjct: 49365 tcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttattatcctaggtc 49306 Query: 490 gtaacaa 496 | ||||| Sbjct: 49305 ggaacaa 49299
>gb|AY219885.1| Lactuca sativa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; plastid genes for plastid products Length = 2529 Score = 563 bits (284), Expect = e-157 Identities = 393/428 (91%), Gaps = 11/428 (2%) Strand = Plus / Plus Query: 73 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgct 60 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 120 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 |||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||||| Sbjct: 121 gtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggat 179 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 239 Query: 313 cggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggtt 372 |||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 240 cggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggtt 293 Query: 373 tgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaa 432 ||||||| |||||| ||||||||||||| ||||||||||||| |||||||||| |||||| Sbjct: 294 tgacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttggagatggaa 353 Query: 433 gtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggt 488 |||||||||||||| | ||||||||||||||||||||| ||||||||||| |||| Sbjct: 354 gtcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttattatctcaggt 413 Query: 489 cgtaacaa 496 || ||||| Sbjct: 414 cggaacaa 421
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 559 bits (282), Expect = e-156 Identities = 378/409 (92%), Gaps = 7/409 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 134324 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 134265 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134264 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 134205 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 134204 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 134145 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 134144 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 134086 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134085 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 134026 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 134025 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 133972 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaactt 422 |||||| |||||| |||||||||| | ||| ||||||||| ||||||| Sbjct: 133971 gacactgcttcacacccaaaaagaggcgagcgacgtctgagttaaactt 133923 Score = 559 bits (282), Expect = e-156 Identities = 378/409 (92%), Gaps = 7/409 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 99121 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 99180 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99181 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 99240 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 99241 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 99300 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 99301 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 99359 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99360 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 99419 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 99420 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 99473 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaactt 422 |||||| |||||| |||||||||| | ||| ||||||||| ||||||| Sbjct: 99474 gacactgcttcacacccaaaaagaggcgagcgacgtctgagttaaactt 99522 Score = 79.8 bits (40), Expect = 1e-11 Identities = 74/85 (87%), Gaps = 4/85 (4%) Strand = Plus / Minus Query: 416 taaacttggatatggaagtcttctttcgtttag----ggtgaagtaagaccaagctcatc 471 |||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 133917 taaacttggagttggaagtcttctttcgtttctcggcggtgaagtaagaccaagctcatg 133858 Query: 472 agcttattatcctaggtcgtaacaa 496 |||||||||||||||||| ||||| Sbjct: 133857 ggcttattatcctaggtcggaacaa 133833 Score = 79.8 bits (40), Expect = 1e-11 Identities = 74/85 (87%), Gaps = 4/85 (4%) Strand = Plus / Plus Query: 416 taaacttggatatggaagtcttctttcgtttag----ggtgaagtaagaccaagctcatc 471 |||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 99528 taaacttggagttggaagtcttctttcgtttctcggcggtgaagtaagaccaagctcatg 99587 Query: 472 agcttattatcctaggtcgtaacaa 496 |||||||||||||||||| ||||| Sbjct: 99588 ggcttattatcctaggtcggaacaa 99612
>dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: SRRT24 Length = 1478 Score = 553 bits (279), Expect = e-154 Identities = 282/283 (99%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1191 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1250 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1310 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1311 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacactgcccg 1370 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1371 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1430 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1431 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 1473
>gb|DQ001733.1| Musa acuminata voucher P.M. McNutt 001 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2721 Score = 553 bits (279), Expect = e-154 Identities = 388/423 (91%), Gaps = 11/423 (2%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttgttgggt 240 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||| Sbjct: 241 attttggtttgacactgcttcacacccaaaaagaagcgagctacgtctgagctaagcttg 300 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 ||||||||||||||||||||||| | |||||||||||||||||||||| |||||||| Sbjct: 301 gatatggaagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttatt 360 Query: 480 atcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtccccatgt 539 ||||||||||| ||||| ||||| |||||||||||| ||||| |||||||||||| Sbjct: 361 atcctaggtcggaacaagttagt------tgataggatccccttttttacgtccccatgt 414 Query: 540 ccc 542 ||| Sbjct: 415 ccc 417
>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 545 bits (275), Expect = e-152 Identities = 281/283 (99%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1162 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1221 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1281 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1341 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1342 tcacactataggagctggccaggtttgaagtcattacccttaaccgtaaggagggggatg 1401 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 ||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1402 cctaaggctagacttgcgactggagtgaagtcgtaacaaggta 1444
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 539 bits (272), Expect = e-150 Identities = 272/272 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1197 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1198 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1257 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1258 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1317 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1318 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1377 Query: 254 cctaaggctaggcttgcgactggagtgaagtc 285 |||||||||||||||||||||||||||||||| Sbjct: 1378 cctaaggctaggcttgcgactggagtgaagtc 1409
>gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplast gene for chloroplast RNA, partial sequence Length = 1563 Score = 537 bits (271), Expect = e-149 Identities = 343/366 (93%), Gaps = 7/366 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1157 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1216 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1217 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1276 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1277 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1336 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1337 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1395 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1396 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1455 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||| Sbjct: 1456 ggctggatcacctccttttcagggagagcta------atgcttgttgggtattttggttt 1509 Query: 374 gacact 379 |||||| Sbjct: 1510 gacact 1515 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 472 agcttattatcctaggtcgtaacaa 496 ||||||||||||||||||||||||| Sbjct: 1525 agcttattatcctaggtcgtaacaa 1549
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 531 bits (268), Expect = e-148 Identities = 271/272 (99%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1135 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 1194 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1195 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1254 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1255 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1314 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1315 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 1374 Query: 254 cctaaggctaggcttgcgactggagtgaagtc 285 |||||||||||||||| ||||||||||||||| Sbjct: 1375 cctaaggctaggcttgtgactggagtgaagtc 1406
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 527 bits (266), Expect = e-146 Identities = 421/470 (89%), Gaps = 12/470 (2%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 146152 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 146093 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 146092 aaacccgtcctcagttcggattgcaggctgcaagtcgcctgcatgaagtaggaatcgcta 146033 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 146032 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 145973 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||||| ||||| |||||| || ||||||||| Sbjct: 145972 tcacactatgggagctggccatgcctgaagtcgttacctttaaccaccagaagggggatg 145913 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 145912 ccgaaggcagggctagtgactggagtgaatgcgtaacaaggtagccgtactggaaggtgc 145853 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | Sbjct: 145852 -gctggatcacctccttttcagggagagcta------atgcttgttgggtattttggtct 145800 Query: 374 gacactt-cttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaa 432 ||| ||| ||| | ||||||| || | ||||||| |||||| ||||||||| |||| | Sbjct: 145799 gactcttccttttcacccaaaacgaggccagctacatctgagtgaaacttggagatggta 145740 Query: 433 gtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttat 478 |||||||||||||| | |||||||||||||||||||||| ||||||| Sbjct: 145739 gtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttat 145690 Score = 527 bits (266), Expect = e-146 Identities = 421/470 (89%), Gaps = 12/470 (2%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 107176 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 107235 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 107236 aaacccgtcctcagttcggattgcaggctgcaagtcgcctgcatgaagtaggaatcgcta 107295 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 107296 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 107355 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||||| ||||| |||||| || ||||||||| Sbjct: 107356 tcacactatgggagctggccatgcctgaagtcgttacctttaaccaccagaagggggatg 107415 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107416 ccgaaggcagggctagtgactggagtgaatgcgtaacaaggtagccgtactggaaggtgc 107475 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||| |||||| |||||||||||||| | Sbjct: 107476 -gctggatcacctccttttcagggagagcta------atgcttgttgggtattttggtct 107528 Query: 374 gacactt-cttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaa 432 ||| ||| ||| | ||||||| || | ||||||| |||||| ||||||||| |||| | Sbjct: 107529 gactcttccttttcacccaaaacgaggccagctacatctgagtgaaacttggagatggta 107588 Query: 433 gtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttat 478 |||||||||||||| | |||||||||||||||||||||| ||||||| Sbjct: 107589 gtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttat 107638
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 525 bits (265), Expect = e-146 Identities = 320/337 (94%), Gaps = 1/337 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 135507 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 135448 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135447 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 135388 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 135387 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 135328 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 135327 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 135269 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135268 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 135209 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 135208 ggctggatcacctccttttcagggagagctaatgctt 135172 Score = 525 bits (265), Expect = e-146 Identities = 320/337 (94%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 101257 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 101316 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 101317 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 101376 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 101377 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 101436 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 101437 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 101495 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101496 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 101555 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 101556 ggctggatcacctccttttcagggagagctaatgctt 101592 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 463 aagctcatcagcttattatcctaggtcgtaacaa 496 |||| ||| ||||||||||||||||||| ||||| Sbjct: 135136 aagcccatgagcttattatcctaggtcggaacaa 135103 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 463 aagctcatcagcttattatcctaggtcgtaacaa 496 |||| ||| ||||||||||||||||||| ||||| Sbjct: 101628 aagcccatgagcttattatcctaggtcggaacaa 101661
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 525 bits (265), Expect = e-146 Identities = 437/489 (89%), Gaps = 19/489 (3%) Strand = Plus / Plus Query: 17 cgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaa 76 ||||||||||||| ||||||||||||| |||||| ||||||||||||||||| ||||||| Sbjct: 1475 cgtgctacaatggccgggacaaagggttgcgatcccgcgagggtgagctaaccccaaaaa 1534 Query: 77 cccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagta 136 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1535 cccgtcctcagttgggattgcaggctgcaactcgcctgcatgaagccggaatcgctagta 1594 Query: 137 atcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgtca 196 |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||| Sbjct: 1595 atcgccggtcagccatacggcggtgaattcggtaccgggccttgtacacaccgcccgtca 1654 Query: 197 cactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatgcct 256 |||||| ||||||||||||| |||||| ||| ||||||||| |||| |||||||||| Sbjct: 1655 cactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaagg-gggggatgccg 1712 Query: 257 aaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcggc 316 || || |||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1713 aa-gcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcggc 1771 Query: 317 tggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggtttgac 376 |||||||||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 1772 tggatcacctccttttcagggagagcta------atgcttgttgggtattttggtttgat 1825 Query: 377 acttcttcacgccc-----aaaaagaaggcagctacgtctgagctaaacttggatatgga 431 ||| |||||| ||| |||||||||| ||||||||||||| ||||||||| ||||| Sbjct: 1826 actgcttcacacccccaaaaaaaagaagggagctacgtctgagtgaaacttggagatgga 1885 Query: 432 agtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctagg 487 ||||||||||| ||| | |||||||||||||| ||||||| |||||||||||| ||| Sbjct: 1886 agtcttctttcctttctcgacggtgaagtaagacc-agctcatgagcttattatcccagg 1944 Query: 488 tcgtaacaa 496 ||| ||||| Sbjct: 1945 tcggaacaa 1953 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||||||| ||||| |||||||||||| ||||| Sbjct: 1956 tgataggatccccttttttacgtccccatgttccccc 1992
>gb|AF141153.1|AF141153 Vigna unguiculata clone VU124KNF1-2 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 459 Score = 515 bits (260), Expect = e-143 Identities = 386/427 (90%), Gaps = 12/427 (2%) Strand = Plus / Minus Query: 20 gctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaaccc 79 |||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 448 gctacaatggacgggacaaaggatcgcgatcccgcgagggtgagctaactccaaaaaccc 389 Query: 80 gtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaatc 139 ||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 388 gtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgctagtaatc 329 Query: 140 gccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgtcacac 199 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 328 gccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccgtcacac 269 Query: 200 tataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatgcctaag 259 ||| ||||||||||||| |||||| ||||| ||||||| ||||||||||||||| ||| Sbjct: 268 tatgggagctggccatgcccgaagtcgttacc-ttaaccgcaaggagggggatgccgaag 210 Query: 260 gctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctgg 319 || |||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 gcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctgg 150 Query: 320 atcacctccttttcagggagagctaatgcttatgcttattgggtattttggtttgacact 379 |||||||||||||||||||||||||||| ||| ||||||| |||||||||| Sbjct: 149 atcacctccttttcagggagagctaatg------cttgttgggta-----gtttgacact 101 Query: 380 tcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaagtcttct 439 |||||| |||||||||||| || || |||||| ||| ||||| ||||||||||||| Sbjct: 100 gcttcacacccaaaaagaagcgagttatgtctgaatcaaatttggagatggaagtcttct 41 Query: 440 ttcgttt 446 ||||||| Sbjct: 40 ttcgttt 34
>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene Length = 1998 Score = 509 bits (257), Expect = e-141 Identities = 318/337 (94%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||| |||||||| |||| Sbjct: 1423 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgaggaggagctaaccccaa 1482 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1483 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1542 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1543 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1602 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1603 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1661 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1662 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1721 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 1722 ggctggatcacctccttttcagggagagctaatgctt 1758
>gb|AF525771.1|AF525770S2 Populus tomentosa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile gene, complete sequence; chloroplast genes for chloroplast products Length = 590 Score = 507 bits (256), Expect = e-140 Identities = 386/428 (90%), Gaps = 11/428 (2%) Strand = Plus / Plus Query: 73 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgct 60 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 61 agtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgccc 120 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 |||||||||| ||||||||||||| |||||| ||| ||||||||| |||| ||||||| Sbjct: 121 gtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggggggggat 179 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| |||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gccgaaggcagggctagtggctggagtgaagtcgtaacaaggtagccgtactggaaggtg 239 Query: 313 cggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggtt 372 ||||||||||||||||||||||||||||| || |||||| ||||||||||||||| Sbjct: 240 cggctggatcacctccttttcagggagaggta------atgcttgttgggtattttggtt 293 Query: 373 tgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaa 432 ||||||| |||||| ||||||||||| | |||| ||| |||| |||||||| | |||| Sbjct: 294 tgacactgcttcacacccaaaaagaaaggagctgcgtatgagttaaacttgtcgacggaa 353 Query: 433 gtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggt 488 |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| Sbjct: 354 gtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttattatcctaggt 413 Query: 489 cgtaacaa 496 || ||||| Sbjct: 414 cggaacaa 421
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 504 bits (254), Expect = e-139 Identities = 339/365 (92%), Gaps = 8/365 (2%) Strand = Plus / Plus Query: 16 acgtgctacaatgggcgggacaaagggtcgcgatctcgcga-gggtgagctaactccaaa 74 |||||||||||||| |||||||||||||||||||| ||||| |||||||||||| ||||| Sbjct: 1523 acgtgctacaatggccgggacaaagggtcgcgatcccgcgaagggtgagctaaccccaaa 1582 Query: 75 aacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctag 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1583 aacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctag 1642 Query: 135 taatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgt 194 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1643 taatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccgt 1702 Query: 195 cacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatgc 254 |||||||| |||||||| |||| ||||| ||| ||||||||| |||||||||||||| Sbjct: 1703 cacactatgggagctggtcatgccccaagtcgtta-ccttaaccgcaaggagggggatgc 1761 Query: 255 ctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcg 314 | ||||| |||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1762 cgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcg 1821 Query: 315 gctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggtttg 374 |||||||||||||||||||||||||||||| |||||| ||||||||||||||||| Sbjct: 1822 gctggatcacctccttttcagggagagcta------atgcttgttgggtattttggtttg 1875 Query: 375 acact 379 ||||| Sbjct: 1876 acact 1880 Score = 87.7 bits (44), Expect = 4e-14 Identities = 75/85 (88%), Gaps = 4/85 (4%) Strand = Plus / Plus Query: 416 taaacttggatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatc 471 |||||||| | |||||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 1883 taaacttgaagatggaagttttctttcgtttctcgacggtgaagtaagaccaagctcatg 1942 Query: 472 agcttattatcctaggtcgtaacaa 496 ||||||||||||||||||| ||||| Sbjct: 1943 agcttattatcctaggtcggaacaa 1967
>gb|DQ001734.1| Dracaena sanderiana voucher P.M. McNutt 011 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 500 bits (252), Expect = e-138 Identities = 347/377 (92%), Gaps = 5/377 (1%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| |||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccacaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaagggggggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttgttgagt 240 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| |||||||||||| ||||||||||||||||| |||| Sbjct: 241 attttggtttgacactgcttcacacccaaaaagaagcgagctacgtctgagctaagcttg 300 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 ||||| ||||||||||||||||| | |||||||||||||||||||||| |||||||| Sbjct: 301 gatattgaagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttatt 360 Query: 480 atcctaggtcgtaacaa 496 ||||||||||| ||||| Sbjct: 361 atcctaggtcggaacaa 377 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtc 540 |||||||||||| |||| ||||||||||||| Sbjct: 380 tgataggatcccactttttacgtccccatgtc 411
>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2452 Score = 494 bits (249), Expect = e-136 Identities = 317/337 (94%), Gaps = 2/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 1875 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggggagctaaccccaa 1934 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1935 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1994 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1995 gtaatcgccggtca-ccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 2053 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 2054 tcacactacgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 2112 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2113 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2172 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 2173 ggctggatcacctccttttcagggagagctaatgctt 2209 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 ctcatcagcttattatcctaggtcg 490 ||||| ||||||||||||||||||| Sbjct: 2235 ctcatgagcttattatcctaggtcg 2259
>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2231 Score = 494 bits (249), Expect = e-136 Identities = 317/337 (94%), Gaps = 2/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||| |||||||| |||| Sbjct: 1750 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggggagctaaccccaa 1809 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1810 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1869 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1870 gtaatcgccggtca-ccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1928 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1929 tcacactacgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1987 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1988 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2047 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 2048 ggctggatcacctccttttcagggagagctaatgctt 2084 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 466 ctcatcagcttattatcctaggtcg 490 ||||| ||||||||||||||||||| Sbjct: 2110 ctcatgagcttattatcctaggtcg 2134
>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2291 Score = 494 bits (249), Expect = e-136 Identities = 317/337 (94%), Gaps = 2/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||||| |||||| ||||||| |||||||| |||| Sbjct: 1798 acacgtgctacaatggccgggacaaagggt-gcgatcccgcgaggaggagctaaccccaa 1856 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1857 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1916 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1917 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1976 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1977 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 2035 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2036 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2095 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 2096 ggctggatcacctccttttcagggagagctaatgctt 2132 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 459 gaccaagctcatcagcttattatcctaggtcg 490 |||||| ||||| ||||||||||||||||||| Sbjct: 2160 gaccaaactcatgagcttattatcctaggtcg 2191
>emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA gene Length = 1990 Score = 494 bits (249), Expect = e-136 Identities = 317/337 (94%), Gaps = 2/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||| ||||| ||||||| |||||||| |||| Sbjct: 1421 acacgtgctacaatggccgggacaaagggtc-cgatcccgcgaggaggagctaaccccaa 1479 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1480 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1539 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1540 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1599 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1600 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1658 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1659 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1718 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 1719 ggctggatcacctccttttcagggagagctaatgctt 1755 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 459 gaccaagctcatcagcttattatcctaggtcg 490 |||||| ||||| ||||||||||||||||||| Sbjct: 1783 gaccaaactcatgagcttattatcctaggtcg 1814
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 488 bits (246), Expect = e-134 Identities = 319/338 (94%), Gaps = 4/338 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 1370 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagg-tgagctaaccccaa 1428 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1429 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1488 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1489 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1548 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||||||| |||||||| ||||||||||||| Sbjct: 1549 tcacactatgggagctggccatgcccgaagtcatta-tcttaaccgcaaggagggggatg 1607 Query: 254 cctaaggctaggctt-gcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 || ||||| ||| || | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1608 ccgaaggc-aggattagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 1666 Query: 313 cggctggatcacctccttttcagggagagctaatgctt 350 |||||||||||||||||||||||||||| ||||||||| Sbjct: 1667 cggctggatcacctccttttcagggagaactaatgctt 1704 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 449 ggtgaagtaagaccaagctcatcagcttattatcctaggtcg 490 |||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 1732 ggtgaagtcagaccaagctcatgagcttattatcctaggtcg 1773
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 486 bits (245), Expect = e-134 Identities = 315/337 (93%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 83425 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 83484 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 83485 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 83544 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83545 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 83604 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 83605 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 83663 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83664 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 83723 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 83724 ggctggatcacctccttttcagggagagctaatgctt 83760
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 486 bits (245), Expect = e-134 Identities = 315/337 (93%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 85514 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 85573 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 85574 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 85633 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85634 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 85693 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 85694 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 85752 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85753 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 85812 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||||||||| Sbjct: 85813 ggctggatcacctccttttcagggagagctaatgctt 85849
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 484 bits (244), Expect = e-133 Identities = 428/487 (87%), Gaps = 18/487 (3%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||| || |||||||||||||||||||| ||||||||||||||||| || | Sbjct: 1264 acacgtgctacaacggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccca 1323 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1324 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1383 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1384 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1443 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||| |||| |||||||| |||| ||||| ||| ||||||| ||||||||||||| Sbjct: 1444 tcacgctatgggagctggtcatgccctaagtcgtta-tcttaaccacaaggagggggatg 1502 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1503 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1562 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||| ||||||||||| |||||| |||||||||||||||| Sbjct: 1563 ggctggatcacctcctttaaagggagagcta------atgcttgttgggtattttggttt 1616 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| ||||| ||||| || |||||| ||| || |||||||||| |||||| Sbjct: 1617 gacactgcttca-----aaaaaaaa--aagctacatcttagttaaacttggagatggaat 1669 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 | |||||||||| | | |||||||| ||||||||||| |||||||||||||||||| Sbjct: 1670 ttgtctttcgtttctcgacgatgaagtaaaaccaagctcattagcttattatcctaggtc 1729 Query: 490 gtaacaa 496 | ||||| Sbjct: 1730 ggaacaa 1736
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 478 bits (241), Expect = e-131 Identities = 314/337 (93%), Gaps = 1/337 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 120569 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 120510 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 120509 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 120450 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120449 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 120390 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| |||||| ||||||| ||||| Sbjct: 120389 tcacactatgggagctggccatgcccgaagtcgttaccc-taaccgcaaggaggaggatg 120331 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120330 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 120271 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||| ||||||||||||||||| Sbjct: 120270 ggctggatcacctcctttttagggagagctaatgctt 120234 Score = 478 bits (241), Expect = e-131 Identities = 314/337 (93%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 87533 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 87592 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 87593 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 87652 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87653 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 87712 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| |||||| ||||||| ||||| Sbjct: 87713 tcacactatgggagctggccatgcccgaagtcgttaccc-taaccgcaaggaggaggatg 87771 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87772 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 87831 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||| ||||||||||||||||| Sbjct: 87832 ggctggatcacctcctttttagggagagctaatgctt 87868 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 472 agcttattatcctaggtcgtaacaa 496 ||||||||||||||||||| ||||| Sbjct: 120191 agcttattatcctaggtcggaacaa 120167 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 472 agcttattatcctaggtcgtaacaa 496 ||||||||||||||||||| ||||| Sbjct: 87911 agcttattatcctaggtcggaacaa 87935
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 476 bits (240), Expect = e-131 Identities = 292/308 (94%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1180 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1239 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1240 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1299 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1300 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1359 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1360 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1418 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1419 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1478 Query: 314 ggctggat 321 |||||||| Sbjct: 1479 ggctggat 1486
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 474 bits (239), Expect = e-130 Identities = 291/307 (94%), Gaps = 1/307 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1158 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1217 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1218 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1277 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1278 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1337 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1338 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1396 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1397 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1456 Query: 314 ggctgga 320 ||||||| Sbjct: 1457 ggctgga 1463
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 472 bits (238), Expect = e-130 Identities = 300/318 (94%), Gaps = 2/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 1175 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagg-tgagctaaccccaa 1233 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1234 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1293 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1294 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1353 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1354 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1412 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1413 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1472 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1473 ggctggatcacctccttt 1490
>gb|AF372517.1|AF372517 Medicago sativa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 2703 Score = 470 bits (237), Expect = e-129 Identities = 310/333 (93%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||| Sbjct: 360 acacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaa 419 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 420 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 479 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 480 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 539 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 540 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 598 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 658 Query: 314 ggctggatcacctccttttcagggagagctaat 346 | ||||||||||||||||||||||||| ||||| Sbjct: 659 gactggatcacctccttttcagggagaactaat 691
>gb|DQ001751.1| Rosa hybrid cultivar voucher P.M. McNutt 017 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2581 Score = 470 bits (237), Expect = e-129 Identities = 343/377 (90%), Gaps = 11/377 (2%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 235 attttggtttgacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttg 294 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | ||||||||||||| |||||||| |||||||| Sbjct: 295 gagatggaagtcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttatt 354 Query: 480 atcctaggtcgtaacaa 496 ||||||||||| ||||| Sbjct: 355 atcctaggtcggaacaa 371 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| ||||||||||||||| Sbjct: 374 tgataggatccccttttttacgtccccatgtccc 407
>gb|DQ001740.1| Helianthus annuus voucher P.M. McNutt 021 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2551 Score = 470 bits (237), Expect = e-129 Identities = 343/377 (90%), Gaps = 11/377 (2%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||| Sbjct: 235 attttggtttgacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttg 294 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | ||||||||||||||||||||| |||||||| Sbjct: 295 gagatggaagtcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttatt 354 Query: 480 atcctaggtcgtaacaa 496 ||| |||||| ||||| Sbjct: 355 atctcaggtcggaacaa 371 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatg 538 |||||||||||| ||||| ||||||||||| Sbjct: 374 tgataggatccccttttttacgtccccatg 403
>gb|DQ001739.1| Lactuca sativa voucher P.M. McNutt 016 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2717 Score = 470 bits (237), Expect = e-129 Identities = 343/377 (90%), Gaps = 11/377 (2%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||| Sbjct: 235 attttggtttgacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttg 294 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | ||||||||||||||||||||| |||||||| Sbjct: 295 gagatggaagtcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttatt 354 Query: 480 atcctaggtcgtaacaa 496 ||| |||||| ||||| Sbjct: 355 atctcaggtcggaacaa 371
>emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast genes Length = 2315 Score = 470 bits (237), Expect = e-129 Identities = 313/337 (92%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| | ||||||||| |||||| | |||||||||||||||||| ||| Sbjct: 1647 acacgtgctacaatggaccggacaaaggatcgcgaccccgcgagggtgagctaacttcaa 1706 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1707 aaacctgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 1766 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1767 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1826 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||| Sbjct: 1827 tcacactatgggagctggccatgcccgaagtcatta-ccttaaccgcaaggagggggatg 1885 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1886 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1945 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 | ||||||||||||||||||||||||| ||||||||| Sbjct: 1946 gactggatcacctccttttcagggagaactaatgctt 1982 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 466 ctcatcagcttattatcctaggtcgtaacaa 496 ||||| ||||||||||||||||||| ||||| Sbjct: 2272 ctcatgagcttattatcctaggtcggaacaa 2302
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 468 bits (236), Expect = e-128 Identities = 309/332 (93%), Gaps = 1/332 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||| Sbjct: 1721 acacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaa 1780 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1781 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 1840 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1841 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1900 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1901 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1959 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1960 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2019 Query: 314 ggctggatcacctccttttcagggagagctaa 345 | ||||||||||||||||||||||||| |||| Sbjct: 2020 gactggatcacctccttttcagggagaactaa 2051
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 468 bits (236), Expect = e-128 Identities = 309/332 (93%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||| Sbjct: 26204 acacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaa 26145 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 26144 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 26085 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 26084 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 26025 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 26024 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 25966 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 25965 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 25906 Query: 314 ggctggatcacctccttttcagggagagctaa 345 | ||||||||||||||||||||||||| |||| Sbjct: 25905 gactggatcacctccttttcagggagaactaa 25874
>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1467 Score = 464 bits (234), Expect = e-127 Identities = 298/318 (93%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1151 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1210 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1211 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1270 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1271 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1330 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||||| Sbjct: 1331 tcacactatgggagctggccatgcccgaagtcgttaccc-taaccgtaaggagggggatg 1389 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1390 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1449 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1450 ggctggatcacctccttt 1467
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 462 bits (233), Expect = e-127 Identities = 312/337 (92%), Gaps = 1/337 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 131017 acacgtgctacaatggacgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 130958 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130957 aaacccgaccccagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 130898 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 130897 gtaatcgccggtcagccatacggcggtgaatacgttctcgggccttgtacacaccgcccg 130838 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||| ||||| ||||||||||||| |||||| ||||||||||||| Sbjct: 130837 tcacactatgggagctgaccatgcccgaagtcattaccc-taaccgcaaggagggggatg 130779 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130778 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 130719 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 |||||||||||||||||||||||||||| |||||||| Sbjct: 130718 ggctggatcacctccttttcagggagagttaatgctt 130682 Score = 462 bits (233), Expect = e-127 Identities = 312/337 (92%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 92430 acacgtgctacaatggacgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 92489 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92490 aaacccgaccccagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 92549 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 92550 gtaatcgccggtcagccatacggcggtgaatacgttctcgggccttgtacacaccgcccg 92609 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||| ||||| ||||||||||||| |||||| ||||||||||||| Sbjct: 92610 tcacactatgggagctgaccatgcccgaagtcattaccc-taaccgcaaggagggggatg 92668 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92669 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92728 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 |||||||||||||||||||||||||||| |||||||| Sbjct: 92729 ggctggatcacctccttttcagggagagttaatgctt 92765 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Minus Query: 457 aagaccaagctcatcagcttattatcctaggtcg 490 ||||||||| |||| ||||| ||||||||||||| Sbjct: 130608 aagaccaagttcatgagcttcttatcctaggtcg 130575 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 457 aagaccaagctcatcagcttattatcctaggtcg 490 ||||||||| |||| ||||| ||||||||||||| Sbjct: 92839 aagaccaagttcatgagcttcttatcctaggtcg 92872
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 460 bits (232), Expect = e-126 Identities = 311/336 (92%), Gaps = 1/336 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| |||| Sbjct: 1191 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaaccccaa 1250 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1251 aaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1310 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1311 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1370 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||||||| Sbjct: 1371 tcacactacgggagctggccatgcccgaagtcgttaccc-taaccttaaggaaggggatg 1429 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1430 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1489 Query: 314 ggctggatcacctccttttcagggagagctaatgct 349 ||||||||||||||||||||| |||||||||||||| Sbjct: 1490 ggctggatcacctccttttcaaggagagctaatgct 1525
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 460 bits (232), Expect = e-126 Identities = 308/332 (92%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||| | |||||||||||||||||| ||| Sbjct: 82280 acacgtgctacaatggacgggacaaaggatcgcgaccccgcgagggtgagctaacttcaa 82221 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 82220 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 82161 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 82160 gtaatcgccggtcagcaatacggcggtgaattcgttcccgggccttgtacacaccgcccg 82101 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 82100 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 82042 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82041 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 81982 Query: 314 ggctggatcacctccttttcagggagagctaa 345 | ||||||||||||||||||||||||| |||| Sbjct: 81981 gactggatcacctccttttcagggagaactaa 81950
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 460 bits (232), Expect = e-126 Identities = 311/336 (92%), Gaps = 1/336 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| |||| Sbjct: 153983 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaaccccaa 153924 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 153923 aaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaagccggaatcgcta 153864 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 153863 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 153804 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||||||| Sbjct: 153803 tcacactacgggagctggccatgcccgaagtcgttaccc-taaccttaaggaaggggatg 153745 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153744 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 153685 Query: 314 ggctggatcacctccttttcagggagagctaatgct 349 ||||||||||||||||||||| |||||||||||||| Sbjct: 153684 ggctggatcacctccttttcaaggagagctaatgct 153649 Score = 460 bits (232), Expect = e-126 Identities = 311/336 (92%), Gaps = 1/336 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| |||| Sbjct: 114683 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaaccccaa 114742 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 114743 aaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaagccggaatcgcta 114802 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 114803 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 114862 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||||||| Sbjct: 114863 tcacactacgggagctggccatgcccgaagtcgttaccc-taaccttaaggaaggggatg 114921 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 114922 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 114981 Query: 314 ggctggatcacctccttttcagggagagctaatgct 349 ||||||||||||||||||||| |||||||||||||| Sbjct: 114982 ggctggatcacctccttttcaaggagagctaatgct 115017
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 460 bits (232), Expect = e-126 Identities = 308/332 (92%), Gaps = 1/332 (0%) Strand = Plus / Plus Query: 19 tgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaacc 78 ||||||||||| | ||||||||| |||||| | |||||||||||||||||| |||||||| Sbjct: 1918 tgctacaatggaccggacaaaggatcgcgaccccgcgagggtgagctaacttcaaaaacc 1977 Query: 79 cgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaat 138 ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1978 tgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgctagtaat 2037 Query: 139 cgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgtcaca 198 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2038 cgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccgtcaca 2097 Query: 199 ctataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatgcctaa 258 |||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||| || Sbjct: 2098 ctatgggagctggccatgcccgaagtcatta-ccttaaccgcaaggagggggatgccgaa 2156 Query: 259 ggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctg 318 ||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2157 ggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcgactg 2216 Query: 319 gatcacctccttttcagggagagctaatgctt 350 |||||||||||||||||||||| ||||||||| Sbjct: 2217 gatcacctccttttcagggagaactaatgctt 2248 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 466 ctcatcagcttattatcctaggtcgtaacaa 496 ||||| ||||||||||||||||||| ||||| Sbjct: 2538 ctcatgagcttattatcctaggtcggaacaa 2568
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 460 bits (232), Expect = e-126 Identities = 308/332 (92%), Gaps = 1/332 (0%) Strand = Plus / Plus Query: 19 tgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaacc 78 ||||||||||| | ||||||||| |||||| | |||||||||||||||||| |||||||| Sbjct: 1918 tgctacaatggaccggacaaaggatcgcgaccccgcgagggtgagctaacttcaaaaacc 1977 Query: 79 cgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaat 138 ||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||| Sbjct: 1978 tgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgctagtaat 2037 Query: 139 cgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccgtcaca 198 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2038 cgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccgtcaca 2097 Query: 199 ctataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatgcctaa 258 |||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||| || Sbjct: 2098 ctatgggagctggccatgcccgaagtcatta-ccttaaccgcaaggagggggatgccgaa 2156 Query: 259 ggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctg 318 ||| |||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2157 ggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgcgactg 2216 Query: 319 gatcacctccttttcagggagagctaatgctt 350 |||||||||||||||||||||| ||||||||| Sbjct: 2217 gatcacctccttttcagggagaactaatgctt 2248 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 466 ctcatcagcttattatcctaggtcgtaacaa 496 ||||| ||||||||||||||||||| ||||| Sbjct: 2538 ctcatgagcttattatcctaggtcggaacaa 2568
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 458 bits (231), Expect = e-125 Identities = 424/487 (87%), Gaps = 16/487 (3%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||| | ||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 4165 acacgtgctacaatagacgggacaaaggatcgcgatcccgcgagggtgagctaactccaa 4106 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||| ||| ||||| |||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 4105 aaacctgtctgcagtttggattgtaggctgcaactcgcctacatgaagccggaatcgcta 4046 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 4045 gtaatcgccggtcagccatacggcggtgaattcgttcccgagtcttgtacacaccgcccg 3986 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||| ||||||| |||||| ||||| ||||||| ||||||||||||| Sbjct: 3985 tcacactatgggagcaggccatgcccgaagtcgttacc-ttaaccgcaaggagggggatg 3927 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| || | | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3926 ccgaaggcagggttagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 3867 Query: 314 ggctggatcacctccttttcagggagagctaatgcttatgcttattgggtattttggttt 373 |||||||||||||||||||||||||||||||||| ||| ||||||| |||| Sbjct: 3866 ggctggatcacctccttttcagggagagctaatg------cttgttgggta-----gttt 3818 Query: 374 gacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttggatatggaag 433 |||||| |||||| |||||||||||| || || |||||| ||| ||||| ||||||| Sbjct: 3817 gacactgcttcacacccaaaaagaagcgagttatgtctgaatcaaatttggagatggaag 3758 Query: 434 tcttctttcgttt----agggtgaagtaagaccaagctcatcagcttattatcctaggtc 489 |||||||| |||| |||||||||| || || ||||| |||||||||||||||||| Sbjct: 3757 tcttcttttgtttctcgctggtgaagtaaaactaaactcatgagcttattatcctaggtc 3698 Query: 490 gtaacaa 496 | ||||| Sbjct: 3697 ggaacaa 3691
>gb|DQ001749.1| Cucurbita pepo voucher P.M. McNutt 015 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2578 Score = 456 bits (230), Expect = e-125 Identities = 342/377 (90%), Gaps = 13/377 (3%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaagg--gggctagtgactggagtgaagtcgtaacaaggtagccgtac 178 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 179 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 232 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 233 attttggtttgacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttg 292 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | ||||||||||||| |||||||| |||||||| Sbjct: 293 gagatggaagtcttctttcgtttctcgacggtgaagtaagactaagctcatgagcttatt 352 Query: 480 atcctaggtcgtaacaa 496 ||||||||||| ||||| Sbjct: 353 atcctaggtcggaacaa 369 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||||| ||||| ||||||||||||||| Sbjct: 372 tgataggatccccttttttacgtccccatgtccc 405
>gb|DQ001741.1| Dahlia hybrid cultivar voucher P.M. McNutt 007 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2554 Score = 456 bits (230), Expect = e-125 Identities = 342/377 (90%), Gaps = 13/377 (3%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaagg--gggctagtgactggagtgaagtcgtaacaaggtagccgtac 178 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 179 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 232 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||| Sbjct: 233 attttggtttgacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttg 292 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | ||||||||||||||||||||| |||||||| Sbjct: 293 gagatggaagtcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttatt 352 Query: 480 atcctaggtcgtaacaa 496 ||| |||||| ||||| Sbjct: 353 atctcaggtcggaacaa 369
>gb|DQ001738.1| Lactuca sativa voucher P.M. McNutt 004 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2713 Score = 456 bits (230), Expect = e-125 Identities = 342/377 (90%), Gaps = 13/377 (3%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaagg--gggctagtgactggagtgaagtcgtaacaaggtagccgtac 178 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 179 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 232 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| ||||||||||||| ||||||||||||| |||||||| Sbjct: 233 attttggtttgacactgcttcacacccaaaaagaagggagctacgtctgagttaaacttg 292 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | ||||||||||||||||||||| |||||||| Sbjct: 293 gagatggaagtcttctttcgtttctcgacagtgaagtaagaccaagctcatgagcttatt 352 Query: 480 atcctaggtcgtaacaa 496 ||| |||||| ||||| Sbjct: 353 atctcaggtcggaacaa 369
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 456 bits (230), Expect = e-125 Identities = 299/318 (94%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1799 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 1858 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1859 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1918 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1919 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1978 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||| |||||||| Sbjct: 1979 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaagg-gggggatg 2036 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || || || |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2037 ccgaa-gcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2095 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 2096 ggctggatcacctccttt 2113
>gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 genomic sequence, complete sequence Length = 110954 Score = 454 bits (229), Expect = e-124 Identities = 307/332 (92%), Gaps = 7/332 (2%) Strand = Plus / Plus Query: 53 gcgagggtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcc 112 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 35097 gcgagggtgagctaaccccaaaaacccttcctcagttcggattgcaggctgcaactcgcc 35156 Query: 113 tgcatgaagcaggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttccc 172 |||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 35157 tgcatgaagccggaatcgctagtaatcgtcggtcagccatacggcggtgaattcgttccc 35216 Query: 173 gggccttgtacacaccgcccgtcacactataggagctggccatgtttgaagtcattaccc 232 |||||||||||||||||||||||||||||| ||||||||||||| |||||| ||| || Sbjct: 35217 gggccttgtacacaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-cc 35275 Query: 233 ttaaccgtaaggagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 ||||||| ||||||||||||||| ||||| |||| | |||||||||||||||||||||| Sbjct: 35276 ttaaccgcaaggagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaa 35335 Query: 293 ggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgcttat 352 |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 35336 ggtagccgtactggaaggtgcggctggatcacctccttttcagggagagcta------at 35389 Query: 353 gcttattgggtattttggtttgacacttcttc 384 |||| |||||||||||||||||||||| |||| Sbjct: 35390 gcttgttgggtattttggtttgacactgcttc 35421
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 452 bits (228), Expect = e-124 Identities = 310/336 (92%), Gaps = 1/336 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||| | |||||||| ||||||| |||| Sbjct: 1152 acacgtgctacaatggccgggacaaaggatcgcgaccccgcgagggcaagctaaccccaa 1211 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1212 aaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1271 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1272 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1331 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| |||||| ||||| |||||| ||||||| Sbjct: 1332 tcacactacgggagctggccatgcccgaagtcgttaccc-taaccttaaggaaggggatg 1390 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1450 Query: 314 ggctggatcacctccttttcagggagagctaatgct 349 ||||||||||||||||||||| |||||||||||||| Sbjct: 1451 ggctggatcacctccttttcaaggagagctaatgct 1486 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 453 aagtaagaccaagctcatcagcttattatcctaggtcgtaacaa 496 ||||||||| ||| |||| ||||||||||| |||||| ||||| Sbjct: 1594 aagtaagactaagttcatgagcttattatctcaggtcggaacaa 1637
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 450 bits (227), Expect = e-123 Identities = 306/331 (92%), Gaps = 1/331 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 55011 acacgtgctacaacggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 54952 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 54951 aaacccgtcctcagttcggattgcagactgcaactcgtctgcatgaagccggaatcgcta 54892 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 54891 gtaatcgccggtcagccatacggcggtgaattagttcccgggccttgtacacaccgcccg 54832 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| | ||||||||||| |||||| ||| ||||||| ||||||||||||| Sbjct: 54831 tcacactatggaagctggccatgcccgaagtcgtta-tcttaaccaaaaggagggggatg 54773 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54772 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 54713 Query: 314 ggctggatcacctccttttcagggagagcta 344 |||||||||||||||||||||||||||||| Sbjct: 54712 agctggatcacctccttttcagggagagcta 54682 Score = 450 bits (227), Expect = e-123 Identities = 306/331 (92%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 34817 acacgtgctacaacggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 34876 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 34877 aaacccgtcctcagttcggattgcagactgcaactcgtctgcatgaagccggaatcgcta 34936 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 34937 gtaatcgccggtcagccatacggcggtgaattagttcccgggccttgtacacaccgcccg 34996 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| | ||||||||||| |||||| ||| ||||||| ||||||||||||| Sbjct: 34997 tcacactatggaagctggccatgcccgaagtcgtta-tcttaaccaaaaggagggggatg 35055 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 35056 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 35115 Query: 314 ggctggatcacctccttttcagggagagcta 344 |||||||||||||||||||||||||||||| Sbjct: 35116 agctggatcacctccttttcagggagagcta 35146 Score = 83.8 bits (42), Expect = 6e-13 Identities = 85/99 (85%), Gaps = 4/99 (4%) Strand = Plus / Minus Query: 402 agctacgtctgagctaaacttggatatggaagtcttctttcgtttag----ggtgaagta 457 |||||| |||||||||||||| || |||||| | || ||||||||| ||||||||| Sbjct: 54686 agctacatctgagctaaactttgagatggaatttttttttcgtttatcaacggtgaagta 54627 Query: 458 agaccaagctcatcagcttattatcctaggtcgtaacaa 496 |||| |||||||| ||||||||||||||||||| ||||| Sbjct: 54626 agactaagctcattagcttattatcctaggtcggaacaa 54588 Score = 83.8 bits (42), Expect = 6e-13 Identities = 85/99 (85%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 402 agctacgtctgagctaaacttggatatggaagtcttctttcgtttag----ggtgaagta 457 |||||| |||||||||||||| || |||||| | || ||||||||| ||||||||| Sbjct: 35142 agctacatctgagctaaactttgagatggaatttttttttcgtttatcaacggtgaagta 35201 Query: 458 agaccaagctcatcagcttattatcctaggtcgtaacaa 496 |||| |||||||| ||||||||||||||||||| ||||| Sbjct: 35202 agactaagctcattagcttattatcctaggtcggaacaa 35240
>gb|DQ001736.1| Eschscholzia californica voucher P.M. McNutt 014 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2694 Score = 450 bits (227), Expect = e-123 Identities = 341/377 (90%), Gaps = 14/377 (3%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaagg---ggctagtgactggagtgaagtcgtaacaaggtagccgtac 177 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 178 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 231 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| |||||| ||||| |||||| |||||||||| |||| Sbjct: 232 attttggtttgacactgcttcacacccaaagagaagcgagctacatctgagctaagcttg 291 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | |||||||||||||||||||||| |||||||| Sbjct: 292 gagatggaagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttatt 351 Query: 480 atcctaggtcgtaacaa 496 ||||||||||| ||||| Sbjct: 352 atcctaggtcggaacaa 368 Score = 44.1 bits (22), Expect = 0.52 Identities = 31/34 (91%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtccc 542 |||||||||| | ||||| ||||||||||||||| Sbjct: 371 tgataggatctccttttttacgtccccatgtccc 404
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 450 bits (227), Expect = e-123 Identities = 306/331 (92%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1745 acacgtgctacaacggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 1804 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||| Sbjct: 1805 aaacccgtcctcagttcggattgcagactgcaactcgtctgcatgaagccggaatcgcta 1864 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1865 gtaatcgccggtcagccatacggcggtgaattagttcccgggccttgtacacaccgcccg 1924 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| | ||||||||||| |||||| ||| ||||||| ||||||||||||| Sbjct: 1925 tcacactatggaagctggccatgcccgaagtcgtta-tcttaaccaaaaggagggggatg 1983 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1984 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 2043 Query: 314 ggctggatcacctccttttcagggagagcta 344 |||||||||||||||||||||||||||||| Sbjct: 2044 agctggatcacctccttttcagggagagcta 2074 Score = 83.8 bits (42), Expect = 6e-13 Identities = 85/99 (85%), Gaps = 4/99 (4%) Strand = Plus / Plus Query: 402 agctacgtctgagctaaacttggatatggaagtcttctttcgtttag----ggtgaagta 457 |||||| |||||||||||||| || |||||| | || ||||||||| ||||||||| Sbjct: 2070 agctacatctgagctaaactttgagatggaatttttttttcgtttatcaacggtgaagta 2129 Query: 458 agaccaagctcatcagcttattatcctaggtcgtaacaa 496 |||| |||||||| ||||||||||||||||||| ||||| Sbjct: 2130 agactaagctcattagcttattatcctaggtcggaacaa 2168
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 448 bits (226), Expect = e-122 Identities = 313/339 (92%), Gaps = 6/339 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| Sbjct: 118831 acacgtgctacaatggccgggacaaagggtcgcgacctcgcgagagaaagctaacctcaa 118772 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 118771 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 118712 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118711 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 118652 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||| | ||||||||||||||||| || Sbjct: 118651 tcacactatgggagctggccatgcccgaagtcgttactc-taaccgtaaggaggggggtg 118593 Query: 254 ccta--aggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggt 311 || | ||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118592 ccgaacagg---ggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggt 118536 Query: 312 gcggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 118535 gcggctggatcacctcctttttagggagagctaatgctt 118497 Score = 448 bits (226), Expect = e-122 Identities = 313/339 (92%), Gaps = 6/339 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| Sbjct: 83289 acacgtgctacaatggccgggacaaagggtcgcgacctcgcgagagaaagctaacctcaa 83348 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 83349 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 83408 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83409 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 83468 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||| | ||||||||||||||||| || Sbjct: 83469 tcacactatgggagctggccatgcccgaagtcgttactc-taaccgtaaggaggggggtg 83527 Query: 254 ccta--aggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggt 311 || | ||| |||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83528 ccgaacagg---ggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggt 83584 Query: 312 gcggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||| ||||||||||||||||| Sbjct: 83585 gcggctggatcacctcctttttagggagagctaatgctt 83623 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 467 tcatcagcttattatcctaggtcgtaacaa 496 |||| ||||||||||||||||||| ||||| Sbjct: 118391 tcataagcttattatcctaggtcggaacaa 118362 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 467 tcatcagcttattatcctaggtcgtaacaa 496 |||| ||||||||||||||||||| ||||| Sbjct: 83729 tcataagcttattatcctaggtcggaacaa 83758
>gb|DQ001747.1| Nicotiana tabacum voucher P.M. McNutt 023 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2379 Score = 448 bits (226), Expect = e-122 Identities = 344/382 (90%), Gaps = 16/382 (4%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaa 418 |||||||||||||||| |||||| ||| |||||||||| ||||||||||||| ||| Sbjct: 235 attttggtttgacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaa 294 Query: 419 acttggatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagc 474 ||||||| |||||||||||||||| ||| | |||||||||||||||||||||| ||| Sbjct: 295 acttggagatggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagc 354 Query: 475 ttattatcctaggtcgtaacaa 496 |||||||||||||||| ||||| Sbjct: 355 ttattatcctaggtcggaacaa 376 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||| ||| ||||| |||||||||||| ||||| Sbjct: 379 tgataggacccccttttttacgtccccatgttccccc 415
>gb|DQ001746.1| Lycopersicon esculentum voucher P.M. McNutt 024 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2494 Score = 448 bits (226), Expect = e-122 Identities = 344/382 (90%), Gaps = 16/382 (4%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaa 418 |||||||||||||||| |||||| ||| |||||||||| ||||||||||||| ||| Sbjct: 235 attttggtttgacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaa 294 Query: 419 acttggatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagc 474 ||||||| |||||||||||||||| ||| | |||||||||||||||||||||| ||| Sbjct: 295 acttggagatggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagc 354 Query: 475 ttattatcctaggtcgtaacaa 496 |||||||||||||||| ||||| Sbjct: 355 ttattatcctaggtcggaacaa 376
>gb|DQ001745.1| Solanum tuberosum voucher P.M. McNutt 010 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2495 Score = 448 bits (226), Expect = e-122 Identities = 344/382 (90%), Gaps = 16/382 (4%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgccc-----aaaaagaaggcagctacgtctgagctaa 418 |||||||||||||||| |||||| ||| |||||||||| ||||||||||||| ||| Sbjct: 235 attttggtttgacactgcttcacacccccaaaaaaaagaagggagctacgtctgagttaa 294 Query: 419 acttggatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagc 474 ||||||| |||||||||||||||| ||| | |||||||||||||||||||||| ||| Sbjct: 295 acttggagatggaagtcttctttcctttctcgacggtgaagtaagaccaagctcatgagc 354 Query: 475 ttattatcctaggtcgtaacaa 496 |||||||||||||||| ||||| Sbjct: 355 ttattatcctaggtcggaacaa 376 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccc 545 |||||||||||| ||||| ||||||| |||| ||||| Sbjct: 379 tgataggatccccttttttacgtccctatgttccccc 415
>gb|DQ001743.1| Mentha x piperita voucher P.M. McNutt 012 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2734 Score = 448 bits (226), Expect = e-122 Identities = 344/382 (90%), Gaps = 16/382 (4%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||||| ||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttacc-ttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 181 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 234 Query: 364 attttggtttgacacttcttcacgcc-----caaaaagaaggcagctacgtctgagctaa 418 ||||||||||| |||| |||||| || ||||||||||| ||||||||||||| ||| Sbjct: 235 attttggtttgccactgcttcacacccaaaacaaaaagaagggagctacgtctgagttaa 294 Query: 419 acttggatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagc 474 ||||||| |||||||||||||||||||| | |||||||||||||||||||||| ||| Sbjct: 295 acttggagatggaagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagc 354 Query: 475 ttattatcctaggtcgtaacaa 496 |||||||||||||||| ||||| Sbjct: 355 ttattatcctaggtcggaacaa 376 Score = 44.1 bits (22), Expect = 0.52 Identities = 37/42 (88%) Strand = Plus / Plus Query: 509 tgataggatcccttttttgacgtccccatgtcccccctgtgg 550 |||||||||||| ||| | ||||||||||||| ||| ||||| Sbjct: 379 tgataggatcccctttgttacgtccccatgtctcccgtgtgg 420
>gb|DQ001742.1| Daucus carota voucher P.M. McNutt 005 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2698 Score = 440 bits (222), Expect = e-120 Identities = 378/426 (88%), Gaps = 23/426 (5%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gagggggatgccgaagg--gggctagtgactggagtgaagtcgtaacaaggtagccgtac 178 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 179 tggaaggtgcggctggatcacctccttttcagggagagctaat-ct-----ttgttgggt 232 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||| ||| |||||| ||||||||||||| ||||||||||||| ||||||| Sbjct: 233 attttggtttgatactgcttcacacccaaaaagaagggagctacgtctgagtgaaacttg 292 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 || |||||||||||||||||||| | |||||||||||||||||||||| |||||||| Sbjct: 293 gagatggaagtcttctttcgtttctcgacggtgaagtaagaccaagctcatgagcttatt 352 Query: 480 atcctaggtcgtaacaaattagttgatagtgataggatcccttttttgacgtccccatgt 539 |||| |||||| |||| |||||| ||||||||| ||||| |||||||||||| Sbjct: 353 atcccaggtcggaaca----agttga------taggatccccttttttacgtccccatgt 402 Query: 540 cccccc 545 |||||| Sbjct: 403 cccccc 408
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 440 bits (222), Expect = e-120 Identities = 291/312 (93%), Gaps = 4/312 (1%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 1162 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcgagctaacctcaa 1221 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1222 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1281 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1341 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1342 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1400 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1401 ccgaagg---ggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1457 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1458 ggctggatcacc 1469
>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 440 bits (222), Expect = e-120 Identities = 295/318 (92%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||||| |||| | |||||||| ||||||| ||| Sbjct: 1152 acacgtgctacaatggccgggacaaagggttgcgaccccgcgagggcaagctaacctcaa 1211 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1212 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1271 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1331 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| ||||| ||||||||||||| Sbjct: 1332 tcacactatgggagctggccatgcccgaagtcgttaccc-caaccgcaaggagggggatg 1390 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1450 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1451 ggctggatcacctccttt 1468
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 438 bits (221), Expect = e-120 Identities = 309/337 (91%), Gaps = 1/337 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||| | | |||||||| ||||||| ||| Sbjct: 150305 acacgtgctacaatggccgggacaaagggtcgcaaccccgcgagggcaagctaacctcaa 150246 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 150245 aaacccggcctaagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 150186 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 150185 gtaatcgccggtcagccatacggcggtgaatccgtccccgggccttgtacacaccgcccg 150126 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||| ||||| ||||||||||||| Sbjct: 150125 tcacactatgggagctggccatgcccgaagtcgtta-cctcaaccgcaaggagggggatg 150067 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150066 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 150007 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 |||||||| ||||||||||||||||||| ||| |||| Sbjct: 150006 ggctggattacctccttttcagggagagataaagctt 149970 Score = 438 bits (221), Expect = e-120 Identities = 309/337 (91%), Gaps = 1/337 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||| | | |||||||| ||||||| ||| Sbjct: 108157 acacgtgctacaatggccgggacaaagggtcgcaaccccgcgagggcaagctaacctcaa 108216 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 108217 aaacccggcctaagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 108276 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 108277 gtaatcgccggtcagccatacggcggtgaatccgtccccgggccttgtacacaccgcccg 108336 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||| ||||| ||||||||||||| Sbjct: 108337 tcacactatgggagctggccatgcccgaagtcgtta-cctcaaccgcaaggagggggatg 108395 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108396 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 108455 Query: 314 ggctggatcacctccttttcagggagagctaatgctt 350 |||||||| ||||||||||||||||||| ||| |||| Sbjct: 108456 ggctggattacctccttttcagggagagataaagctt 108492 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 457 aagaccaagctcatcagcttattatcctaggtcgtaacaa 496 ||||||||| |||| ||||||||||||||||||| ||||| Sbjct: 149846 aagaccaagttcataagcttattatcctaggtcggaacaa 149807 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 457 aagaccaagctcatcagcttattatcctaggtcgtaacaa 496 ||||||||| |||| ||||||||||||||||||| ||||| Sbjct: 108616 aagaccaagttcataagcttattatcctaggtcggaacaa 108655
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 434 bits (219), Expect = e-118 Identities = 225/227 (99%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17104 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 17045 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17044 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 16985 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 16984 gtaatcgccggtcagccatacggcggcgaatccgttcccgggccttgtacacaccgcccg 16925 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgt 240 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 16924 tcacactataggagctggccatgtttgaagtcattatccttaaccgt 16878
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 434 bits (219), Expect = e-118 Identities = 225/227 (99%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86027 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 85968 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85967 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 85908 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 85907 gtaatcgccggtcagccatacggcggcgaatccgttcccgggccttgtacacaccgcccg 85848 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgt 240 |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 85847 tcacactataggagctggccatgtttgaagtcattatccttaaccgt 85801
>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1464 Score = 432 bits (218), Expect = e-118 Identities = 294/318 (92%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||| | | |||||||| |||||||| |||| Sbjct: 1148 acacgtgctacaatggccgggacaaagggtcgcaaccccgcgagggagagctaaccccaa 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaacctggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||| | |||||| |||||||||||| Sbjct: 1328 tcacactatgggagctggccatgcccgaagtcgttactc-taaccgcgaggagggggatg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1387 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtaccggaaggtgc 1446 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1447 ggctggatcacctccttt 1464
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 430 bits (217), Expect = e-117 Identities = 272/289 (94%), Gaps = 1/289 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1147 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1206 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1207 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1266 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1267 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1326 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1327 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1385 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 302 || ||||| |||| | |||||||||||||||||||||||||| ||||| Sbjct: 1386 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtaaccgta 1434
>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1486 Score = 428 bits (216), Expect = e-117 Identities = 289/312 (92%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| ||||||| | |||||||| ||| ||| ||| Sbjct: 1176 acacgtgctacaatggccgggacaaagagtcgcgaccccgcgagggcaagccaacctcaa 1235 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1236 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1295 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1296 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1355 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| |||||| ||||||||||||| Sbjct: 1356 tcacactatgggagctggccatgcccgaagtcgttaccc-taaccgcaaggagggggatg 1414 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1415 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1474 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1475 ggctggatcacc 1486
>gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1481 Score = 428 bits (216), Expect = e-117 Identities = 289/312 (92%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| | |||||||||||||||| |||||||| | |||||||| |||| Sbjct: 1171 acacgtgctacaatggccaggacaaagggtcgcgacctcgcgagagagagctaaccccaa 1230 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||| | | ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1231 aaatctggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1290 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1350 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||||||||| | |||||| |||||||||| || Sbjct: 1351 tcacactatgggagctggccatgcccgaagtcattactc-taaccgcaaggaggggggtg 1409 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1410 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1469 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1470 ggctggatcacc 1481
>emb|AJ428862.1|RHI428862 Unidentified cyanobacterium DBD2002 partial 16S rRNA gene Length = 757 Score = 428 bits (216), Expect = e-117 Identities = 271/288 (94%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 471 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 530 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 531 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 590 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 591 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 650 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 651 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 709 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgt 301 || ||||| |||| | |||||||||||||||||||||||||| |||| Sbjct: 710 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtaaccgt 757
>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 1458 Score = 428 bits (216), Expect = e-117 Identities = 271/288 (94%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1172 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1231 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1232 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1291 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1292 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1351 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1352 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1410 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgt 301 || ||||| |||| | |||||||||||||||||||||||||| |||| Sbjct: 1411 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtaaccgt 1458
>gb|DQ001735.1| Lemna gibba voucher P.M. McNutt 008 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2510 Score = 426 bits (215), Expect = e-116 Identities = 340/378 (89%), Gaps = 9/378 (2%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 | |||||||||| |||| |||| | ||||||||||||||||||||||||||||| ||| Sbjct: 121 gggggggatgccgaagggggggctagtgactggagtgaagtcgtaacaaggtagccatac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgctt-atgcttattggg 362 ||||||||||||||||||||||||| ||||||||||||||||||||| || |||| Sbjct: 181 tggaaggtgcggctggatcacctccctttcagggagagctaatgcttgttgagtatt--- 237 Query: 363 tattttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaactt 422 | ||||||||||||||| |||||| |||||||||||| ||||||||||||||||| ||| Sbjct: 238 ttttttggtttgacactgcttcacacccaaaaagaagcgagctacgtctgagctaagctt 297 Query: 423 ggatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttat 478 |||||||||||||||||||||||| | |||||| ||||||||||||||| ||||||| Sbjct: 298 ggatatggaagtcttctttcgtttcttgacggtgaaataagaccaagctcatgagcttat 357 Query: 479 tatcctaggtcgtaacaa 496 |||||||||||| ||||| Sbjct: 358 tatcctaggtcggaacaa 375
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 422 bits (213), Expect = e-115 Identities = 271/289 (93%), Gaps = 1/289 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1165 acacgtgctacaatggacgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1224 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1225 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1284 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1285 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1344 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 1345 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 1403 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 302 || ||||| |||| | |||||||||||||||||||||||||| ||||| Sbjct: 1404 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtaaccgta 1452
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 420 bits (212), Expect = e-114 Identities = 282/303 (93%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1156 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1215 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1216 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1275 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1276 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1335 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1336 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1394 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||| ||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1395 ccgaagg--aggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1452 Query: 314 ggc 316 ||| Sbjct: 1453 ggc 1455
>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH dehydrogenase and ORF 143 Length = 5680 Score = 414 bits (209), Expect = e-112 Identities = 287/307 (93%), Gaps = 7/307 (2%) Strand = Plus / Minus Query: 33 ggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaacccgtcctcagttcgg 92 ||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 300 ggacaaaggatcgcgatcccgcgagg-tgagctaactccaaaaacccgtcctcagttcgg 242 Query: 93 attgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaatcgccggtcagccat 152 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 241 attgtaggctgcaactcgcctgcatgaagccggaatcgctagtaatcgccggtcagccat 182 Query: 153 acggcggtgaatccgttcccgggccttgtacacaccgcccgtcacactataggagctggc 212 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 181 acggcggtgaattcgttcccgggccttgtacacaccgcccgtcacactatgggagctggc 122 Query: 213 catgtttgaagtcattacccttaaccgtaaggagggggatgcctaaggctaggcttgcga 272 |||| |||||| ||| ||||||||| || |||||||||||| |||| |||| | || Sbjct: 121 catg-ccgaagtcgtta-ccttaaccgcaa-gagggggatgccgaagg---ggctagtga 68 Query: 273 ctggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctcctttt 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 67 ctggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctcctttt 8 Query: 333 cagggag 339 ||||||| Sbjct: 7 cagggag 1
>emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 16S rRNA Length = 2000 Score = 414 bits (209), Expect = e-112 Identities = 287/307 (93%), Gaps = 7/307 (2%) Strand = Plus / Plus Query: 33 ggacaaagggtcgcgatctcgcgagggtgagctaactccaaaaacccgtcctcagttcgg 92 ||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1701 ggacaaaggatcgcgatcccgcgagg-tgagctaactccaaaaacccgtcctcagttcgg 1759 Query: 93 attgcaggctgcaactcgcctgcatgaagcaggaatcgctagtaatcgccggtcagccat 152 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1760 attgtaggctgcaactcgcctgcatgaagccggaatcgctagtaatcgccggtcagccat 1819 Query: 153 acggcggtgaatccgttcccgggccttgtacacaccgcccgtcacactataggagctggc 212 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1820 acggcggtgaattcgttcccgggccttgtacacaccgcccgtcacactatgggagctggc 1879 Query: 213 catgtttgaagtcattacccttaaccgtaaggagggggatgcctaaggctaggcttgcga 272 |||| |||||| ||| ||||||||| || |||||||||||| |||| |||| | || Sbjct: 1880 catg-ccgaagtcgtta-ccttaaccgcaa-gagggggatgccgaagg---ggctagtga 1933 Query: 273 ctggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctcctttt 332 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1934 ctggagtgaagtcgtaacaaggtagccgtactggaaggtgcggctggatcacctcctttt 1993 Query: 333 cagggag 339 ||||||| Sbjct: 1994 cagggag 2000
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 412 bits (208), Expect = e-112 Identities = 263/280 (93%), Gaps = 1/280 (0%) Strand = Plus / Minus Query: 71 caaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcg 130 |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9078 caaaaacccggtctcagttcgaattgcaggctgcaactcgcctgcatgaagcaggaatcg 9019 Query: 131 ctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgc 190 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct: 9018 ctagtaatcgccggtcagccatacggcggtgaattcgttctcgggccttgtacacaccgc 8959 Query: 191 ccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggaggggg 250 ||||||||||||||||||||||||||||||||||| ||| ||||||||| |||| ||||| Sbjct: 8958 ccgtcacactataggagctggccatgtttgaagtcttta-ccttaaccgcaagggggggg 8900 Query: 251 atgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaagg 310 ||| | ||||| || | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 8899 atgacaaaggcagggttagtgactggagtgaagtcgtaacaaggtagccgtactggaagg 8840 Query: 311 tgcggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||||| |||||||| Sbjct: 8839 tgcggctggatcacctccttttcagggagagttaatgctt 8800 Score = 67.9 bits (34), Expect = 4e-08 Identities = 61/69 (88%), Gaps = 2/69 (2%) Strand = Plus / Minus Query: 428 tggaagtcttctttcgtttagggtgaagtaagaccaagctcatcagcttattatcctagg 487 ||||||| ||||||||||| | | ||||||||||||| |||| |||||||||||||||| Sbjct: 8748 tggaagtattctttcgtttcgcg--aagtaagaccaagttcataagcttattatcctagg 8691 Query: 488 tcgtaacaa 496 ||| ||||| Sbjct: 8690 tcggaacaa 8682
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 412 bits (208), Expect = e-112 Identities = 257/272 (94%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1133 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 1192 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1193 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1252 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1253 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1312 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1313 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1371 Query: 254 cctaaggctaggcttgcgactggagtgaagtc 285 || ||||| |||||||||||||||||||||| Sbjct: 1372 ccgaaggcagggcttgcgactggagtgaagtc 1403
>gb|AY803214.1| Angiosperm environmental sample clone B92 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 412 bits (208), Expect = e-112 Identities = 269/288 (93%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 260 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 319 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 320 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 379 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 380 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 439 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||| |||||||| Sbjct: 440 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggggggggatg 498 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgt 301 || ||||| |||| | |||||||||||||||||||||||||| |||| Sbjct: 499 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtaaccgt 546
>gb|AY803199.1| Angiosperm environmental sample clone A20 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 412 bits (208), Expect = e-112 Identities = 269/288 (93%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 260 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 319 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 320 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 379 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 380 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 439 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||| |||||||| Sbjct: 440 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggggggggatg 498 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgt 301 || ||||| |||| | |||||||||||||||||||||||||| |||| Sbjct: 499 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtaaccgt 546
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 410 bits (207), Expect = e-111 Identities = 265/283 (93%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1165 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1224 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1225 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 1284 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1285 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1344 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1345 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1403 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 || ||||| |||| | |||||||||||||||||||||||||| Sbjct: 1404 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggta 1446
>gb|AY803217.1| Angiosperm environmental sample clone C82 16S ribosomal RNA gene, partial sequence; chloroplast Length = 545 Score = 410 bits (207), Expect = e-111 Identities = 265/283 (93%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 260 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 319 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 320 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 379 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 380 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 439 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||| |||||||| Sbjct: 440 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggggggggatg 498 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 || ||||| |||| | |||||||||||||||||||||||||| Sbjct: 499 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggta 541
>gb|DQ001748.1| Fragaria vesca voucher P.M. McNutt 020 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2737 Score = 408 bits (206), Expect = e-111 Identities = 336/377 (89%), Gaps = 13/377 (3%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| ||| ||||||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 | |||||||||| |||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gggggggatgccgaagg--gggctagtgactggagtgaagtcgtaacaaggtagccgtac 178 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgcttatgcttattgggt 363 ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 179 tggaaggtgcggctggatcacctccttttcagggagagcta------atgcttgttgggt 232 Query: 364 attttggtttgacacttcttcacgcccaaaaagaaggcagctacgtctgagctaaacttg 423 |||||||||||||||| |||||| |||||||||||| ||||||||||||| |||||||| Sbjct: 233 attttggtttgacactgcttcacacccaaaaagaagcgagctacgtctgagttaaacttg 292 Query: 424 gatatggaagtcttctttcgttt----agggtgaagtaagaccaagctcatcagcttatt 479 | || ||||||||||||||| | ||||||||||||| |||| ||| |||||||| Sbjct: 293 ggggtgtcagtcttctttcgtttctcgacggtgaagtaagactaagcccatgagcttatt 352 Query: 480 atcctaggtcgtaacaa 496 ||||||||||| ||||| Sbjct: 353 atcctaggtcggaacaa 369
>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 408 bits (206), Expect = e-111 Identities = 291/318 (91%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| Sbjct: 1152 acacgtgctacaatggccgggacaaagggtcgcgacctcgcgagaggaagctaacctcaa 1211 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1212 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1271 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1331 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||| | ||||| ||| ||||| | Sbjct: 1332 tcacactatgggagctggccatgcccgaagtcgttactc-caaccgcgagggggggggcg 1390 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1450 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1451 ggctggatcacctccttt 1468
>gb|U24580.1|AEU24580 Angiopteris evecta chloroplast 16S rRNA gene, partial sequence Length = 1447 Score = 408 bits (206), Expect = e-111 Identities = 279/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1147 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1206 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1207 aaactcggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1266 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1267 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1326 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||||| Sbjct: 1327 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcgaggagggggatg 1385 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1386 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1445 Query: 314 gg 315 || Sbjct: 1446 gg 1447
>emb|AJ867671.1| Uncultured bacterium partial 16S rRNA gene, clone RS 8-Bact43 Length = 1489 Score = 406 bits (205), Expect = e-110 Identities = 275/297 (92%), Gaps = 1/297 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1194 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1253 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1254 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1313 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1314 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1373 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 1374 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 1432 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaagg 310 || |||||| |||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1433 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagccgtactggaagg 1489
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 406 bits (205), Expect = e-110 Identities = 275/297 (92%), Gaps = 1/297 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1146 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1205 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1206 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1265 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1266 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1325 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 1326 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 1384 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaagg 310 || |||||| |||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagccgtactggaagg 1441
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact33 Length = 1476 Score = 406 bits (205), Expect = e-110 Identities = 275/297 (92%), Gaps = 1/297 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1181 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1240 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1241 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1300 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1301 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1360 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 1361 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 1419 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaagg 310 || |||||| |||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 1420 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagccgtactggaagg 1476
>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 404 bits (204), Expect = e-109 Identities = 286/312 (91%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1177 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1236 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1237 aaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1296 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| Sbjct: 1297 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccggccg 1356 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| ||| |||||||| |||||| ||||||| Sbjct: 1357 tcacactacgggagctggccatgcccgaagtcgtta-ccttaaccttaaggaaggggatg 1415 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1416 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1475 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1476 ggctggatcacc 1487
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 402 bits (203), Expect = e-109 Identities = 264/283 (93%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1164 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgcgctaactccaa 1223 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1224 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 1283 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1284 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1343 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1344 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1402 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 || ||||| |||| | |||||||||||||||||||||||||| Sbjct: 1403 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggta 1445
>gb|U24590.1|PNU24590 Psilotum nudum chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 400 bits (202), Expect = e-108 Identities = 278/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1152 acacgtgctacaatggacgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1211 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1212 aaacccgaccccagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1271 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1272 gtaatcgccggtcagccatacggcggtgaatacgttctcgggccttgtacacaccgcccg 1331 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||| ||||| ||||||||||||| |||||| ||||||||||||| Sbjct: 1332 tcacactatgggagctgaccatgcccgaagtcattaccc-taaccgcaaggagggggatg 1390 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1450 Query: 314 gg 315 || Sbjct: 1451 gg 1452
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 398 bits (201), Expect = e-108 Identities = 298/329 (90%), Gaps = 1/329 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||| |||||||| | | |||||||| | || ||| || | Sbjct: 140619 acacgtgctacaatggccgggacagagggtcgcaaccccgcgagggcgggccaaccccga 140560 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 140559 aaacccggcctcagttcggattgcaggctgcaactcgcccgcatgaagccggaatcgcta 140500 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140499 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 140440 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| | | ||| ||||| |||| |||| ||| Sbjct: 140439 tcacactacgggagctggccatgcccgaagtcgtca-cctcaaccgcaagggggggaatg 140381 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140380 cctaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 140321 Query: 314 ggctggatcacctccttttcagggagagc 342 ||||||||||||||||| |||||||||| Sbjct: 140320 ggctggatcacctccttcccagggagagc 140292 Score = 398 bits (201), Expect = e-108 Identities = 298/329 (90%), Gaps = 1/329 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||| |||||||| | | |||||||| | || ||| || | Sbjct: 81258 acacgtgctacaatggccgggacagagggtcgcaaccccgcgagggcgggccaaccccga 81317 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 81318 aaacccggcctcagttcggattgcaggctgcaactcgcccgcatgaagccggaatcgcta 81377 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81378 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 81437 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| | | ||| ||||| |||| |||| ||| Sbjct: 81438 tcacactacgggagctggccatgcccgaagtcgtca-cctcaaccgcaagggggggaatg 81496 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81497 cctaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 81556 Query: 314 ggctggatcacctccttttcagggagagc 342 ||||||||||||||||| |||||||||| Sbjct: 81557 ggctggatcacctccttcccagggagagc 81585
>gb|AY803212.1| Angiosperm environmental sample clone B63 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 396 bits (200), Expect = e-107 Identities = 267/288 (92%), Gaps = 1/288 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 260 acacgtgctccaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 319 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 320 aaacccgtcctcagttcggattgcgggctgcaactcgcctgcatgaagccggaatcgcta 379 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 380 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 439 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||| |||||||| Sbjct: 440 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggggggggatg 498 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgt 301 || ||||| |||| | |||||||||||||||||||||||||| |||| Sbjct: 499 ccgaaggcggggctagtgactggagtgaagtcgtaacaaggtaaccgt 546
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 396 bits (200), Expect = e-107 Identities = 252/268 (94%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1152 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1211 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1212 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1271 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1272 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1331 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1332 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1390 Query: 254 cctaaggctaggcttgcgactggagtga 281 || ||||| |||| | ||||||||||| Sbjct: 1391 ccgaaggcagggctagtgactggagtga 1418
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 396 bits (200), Expect = e-107 Identities = 264/284 (92%), Gaps = 2/284 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1146 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 1205 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1206 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagtcggaatcgcta 1265 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1266 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1325 Query: 194 tcacactataggagctgg-ccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||||| | ||||| ||||| |||||| ||| ||||||||| |||||||||||| Sbjct: 1326 tcacactatggsmgctggnccatgcccgaagtcgtta-ccttaaccgcaaggagggggat 1384 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 ||| ||||| |||| | |||||||||||||||||||||||||| Sbjct: 1385 gccgaaggcagggctagtgactggagtgaagtcgtaacaaggta 1428
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 394 bits (199), Expect = e-106 Identities = 263/283 (92%), Gaps = 1/283 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 1166 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgcgctaactccaa 1225 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1226 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 1285 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 1286 gtaatcgccggtcagccatactgcggtgaattcgttcccgggccttgtacacaccgcccg 1345 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1346 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1404 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta 296 || ||||| |||| | |||||||||||||||||||||||||| Sbjct: 1405 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggta 1447
>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence Length = 1435 Score = 394 bits (199), Expect = e-106 Identities = 270/291 (92%), Gaps = 2/291 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1147 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1206 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1207 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1266 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1267 gtaatcgccggtcagccatacggcggtgaa-ccgttcccgggccttgtacacaccgcccg 1325 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| |||||||||||||||||||| Sbjct: 1326 tcacactatgggagctggccatgcccgaagtcgttaccc-taaccgtaaggagggggatg 1384 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtact 304 || ||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct: 1385 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtact 1435
>dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G10, full insert sequence Length = 1448 Score = 392 bits (198), Expect = e-106 Identities = 198/198 (100%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 808 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 809 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 868 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 928 Query: 194 tcacactataggagctgg 211 |||||||||||||||||| Sbjct: 929 tcacactataggagctgg 946
>gb|AF244556.1|AF244556 Huperzia lucidula 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1458 Score = 391 bits (197), Expect = e-105 Identities = 285/312 (91%), Gaps = 3/312 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||| | | |||||||| ||||||| ||| Sbjct: 1150 acacgtgctacaatggccgggacaaagggtcgcaaccccgcgagggcaagctaacctcaa 1209 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1210 aaacccggcctaagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1269 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1270 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1329 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||| ||||| |||| |||||||| Sbjct: 1330 tcacactatgggagctggccatgcccgaagtcgtta-cctcaaccgcaaggggggggatg 1388 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||| ||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1389 ccgaagg--gagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1446 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1447 ggctggatcacc 1458
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 391 bits (197), Expect = e-105 Identities = 267/289 (92%), Gaps = 1/289 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1148 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 1328 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 302 || |||||| |||| | |||||||||||||||||||||||||||||||| Sbjct: 1387 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagccgta 1435
>gb|AY145653.1| Uncultured eukaryote FL12D05 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 695 Score = 391 bits (197), Expect = e-105 Identities = 264/285 (92%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 284 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 225 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 224 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 165 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 105 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 104 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 46 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagc 298 || |||||| |||| | |||||||||||||||||||||||||||| Sbjct: 45 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtagc 1
>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 389 bits (196), Expect = e-105 Identities = 284/312 (91%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1177 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1236 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1237 aaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1296 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1297 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1356 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| ||||||||||||| |||||| ||| |||||||| |||||| || |||| Sbjct: 1357 tcacactacgggagctggccatgcccgaagtcgtta-ccttaaccctaaggaaggtgatg 1415 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || |||| ||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1416 ccgaagggagagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1475 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1476 ggctggatcacc 1487
>dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial sequence, clone: G32 Length = 960 Score = 387 bits (195), Expect = e-104 Identities = 250/267 (93%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 695 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 754 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 755 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 814 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 815 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 874 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 875 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 933 Query: 254 cctaaggctaggcttgcgactggagtg 280 || ||||| |||| | |||||||||| Sbjct: 934 ccgaaggcagggctagtgactggagtg 960
>dbj|AB075086.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR15 Length = 507 Score = 387 bits (195), Expect = e-104 Identities = 250/267 (93%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 242 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 301 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 302 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 361 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 362 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 421 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 422 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 480 Query: 254 cctaaggctaggcttgcgactggagtg 280 || ||||| |||| | |||||||||| Sbjct: 481 ccgaaggcagggctagtgactggagtg 507
>dbj|AB075082.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR11 Length = 507 Score = 387 bits (195), Expect = e-104 Identities = 250/267 (93%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 242 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 301 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 302 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 361 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 362 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 421 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 422 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 480 Query: 254 cctaaggctaggcttgcgactggagtg 280 || ||||| |||| | |||||||||| Sbjct: 481 ccgaaggcagggctagtgactggagtg 507
>dbj|AB075075.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR3 Length = 507 Score = 387 bits (195), Expect = e-104 Identities = 250/267 (93%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 242 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 301 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 302 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 361 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 362 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 421 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 422 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 480 Query: 254 cctaaggctaggcttgcgactggagtg 280 || ||||| |||| | |||||||||| Sbjct: 481 ccgaaggcagggctagtgactggagtg 507
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 385 bits (194), Expect = e-103 Identities = 209/214 (97%) Strand = Plus / Minus Query: 290 caaggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgct 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147956 caaggtagccgtactggaaggtgcggctggatcacctccttttcagggagagctaatgct 147897 Query: 350 tatgcttattgggtattttggtttgacacttcttcacgcccaaaaagaaggcagctacgt 409 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 147896 tatgcttattgggtattttggtttgacactgcttcacgcccaaaaagaaggcagctacgt 147837 Query: 410 ctgagctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaagctca 469 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147836 ctgagctaaacttggatatggaagtcttctttcgtttagggtgaagtaagaccaacctca 147777 Query: 470 tcagcttattatcctaggtcgtaacaaattagtt 503 | |||||||||||||| |||| |||||||||||| Sbjct: 147776 tgagcttattatcctatgtcggaacaaattagtt 147743
>gb|AF393604.1| Nitella sp. CL-2002 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1465 Score = 385 bits (194), Expect = e-103 Identities = 288/318 (90%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| ||||| | | | || || ||||||| ||| Sbjct: 1149 acacgtgctacaatggccgggacaaagagtcgcaaccctgtgaaggcaagctaacctcaa 1208 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1209 aaacccggtctcagttcggattgcaggctgcaactcgcctgcataaaggcggaatcgcta 1268 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1328 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||| ||||| |||||| |||||| ||||| |||||||||||||| Sbjct: 1329 tcacactatgggagctgaccatgcccgaagtcgttaccc-taaccttaaggagggggatg 1387 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1447 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1448 ggctggatcacctccttt 1465
>gb|U24593.1|EAU24593 Equisetum arvense chloroplast 16S rRNA gene, partial sequence Length = 1443 Score = 385 bits (194), Expect = e-103 Identities = 277/302 (91%), Gaps = 2/302 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | ||||||| ||||||| | | Sbjct: 1144 acacgtgctacaatggtcgggacaaagggtcgcgaccccgcgaggca-agctaacctcga 1202 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1203 aaacccgacctcagttcggattgcaggctgcaactcgcctgcatgaagtcggaatcgcta 1262 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1263 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1322 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||||| |||||| |||| |||||||| Sbjct: 1323 tcacactatgggagctggccatgcccgaagtcgttaccc-taaccgcaaggggggggatg 1381 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1382 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1441 Query: 314 gg 315 || Sbjct: 1442 gg 1443
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 383 bits (193), Expect = e-103 Identities = 273/297 (91%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1145 acacgtgctacaatgaccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1204 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1205 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1264 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1324 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||||| ||| ||||||||| ||||||||||||| Sbjct: 1325 tcacactatgggagctggccatgccccaagtcgtta-ccttaaccgcaaggagggggatg 1383 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggta-gccgtactggaag 309 || |||||| |||| | |||||||||||||||||||||||||| || |||||||||| Sbjct: 1384 ccgaaggctgggctagtgactggagtgaagtcgtaacaaggtaggctgtactggaag 1440
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 381 bits (192), Expect = e-102 Identities = 250/268 (93%), Gaps = 1/268 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||| Sbjct: 1136 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtaagctaaccccaa 1195 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1196 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1255 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1256 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1315 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1316 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1374 Query: 254 cctaaggctaggcttgcgactggagtga 281 || ||||| |||| | ||||||||||| Sbjct: 1375 ccgaaggcagggctagtgactggagtga 1402
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 379 bits (191), Expect = e-102 Identities = 288/319 (90%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | || ||||| ||| || || Sbjct: 127256 acacgtgctacaatggccgggacaaagggtcgcgaccccgagagggcaagccaatctcag 127197 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 127196 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaaggcggaatcgcta 127137 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127136 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 127077 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||| | |||||| ||| ||||||| || |||||| |||| Sbjct: 127076 tcacactatgggagctggccacgcccgaagtcgtta-tcttaaccttagggagggagatg 127018 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127017 ccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 126958 Query: 314 ggctggatcacctcctttt 332 ||||||||||||||||||| Sbjct: 126957 ggctggatcacctcctttt 126939 Score = 379 bits (191), Expect = e-102 Identities = 288/319 (90%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | || ||||| ||| || || Sbjct: 92610 acacgtgctacaatggccgggacaaagggtcgcgaccccgagagggcaagccaatctcag 92669 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92670 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaaggcggaatcgcta 92729 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92730 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 92789 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||| | |||||| ||| ||||||| || |||||| |||| Sbjct: 92790 tcacactatgggagctggccacgcccgaagtcgtta-tcttaaccttagggagggagatg 92848 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 92849 ccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 92908 Query: 314 ggctggatcacctcctttt 332 ||||||||||||||||||| Sbjct: 92909 ggctggatcacctcctttt 92927
>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence Length = 1456 Score = 379 bits (191), Expect = e-102 Identities = 267/291 (91%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||| | | |||||||| ||||||| ||| Sbjct: 1167 acacgtgctacaatggccgggacaaagggtcgcaaccccgcgagggcaagctaacctcaa 1226 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1227 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1286 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1287 gtaatcgccggtcagccatacggcggtgaatccgtccccgggccttgtacacaccgcccg 1346 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||| ||||| ||||||||||||| Sbjct: 1347 tcacactatgggagctggccatgcccgaagtcgtta-cctcaaccgcaaggagggggatg 1405 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtact 304 || ||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct: 1406 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtact 1456
>gb|AF393583.1| Chaetosphaeridium globosum SAG 26.98 small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1461 Score = 377 bits (190), Expect = e-101 Identities = 287/318 (90%), Gaps = 1/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | || ||||| ||| || || Sbjct: 1145 acacgtgctacaatggccgggacaaagggtcgcgaccccgagagggcaagccaatctcag 1204 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1205 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaaggcggaatcgcta 1264 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1265 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1324 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||| | |||||| ||| ||||||| || |||||| |||| Sbjct: 1325 tcacactatgggagctggccacgcccgaagtcgtta-tcttaaccttagggagggagatg 1383 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| | ||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 ccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1443 Query: 314 ggctggatcacctccttt 331 |||||||||||||||||| Sbjct: 1444 ggctggatcacctccttt 1461
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 373 bits (188), Expect = e-100 Identities = 252/272 (92%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| | |||||| |||||||||||||||||||||| Sbjct: 1139 acacgtgctacaatggccgggacaaaggattgcgatcccgcgagggtgagctaactccaa 1198 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 1199 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagccggaatcgcta 1258 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1259 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1318 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| |||||||||| || Sbjct: 1319 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggaggggggtg 1377 Query: 254 cctaaggctaggcttgcgactggagtgaagtc 285 || ||||| |||| | ||||||||||||||| Sbjct: 1378 ccgaaggcagggctagtgactggagtgaagtc 1409
>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 371 bits (187), Expect = 2e-99 Identities = 257/279 (92%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1148 acacgtgctacaatggccgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| | ||||||||||| Sbjct: 1328 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcagggagggggatg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 || ||||| |||| | |||||||||||||||||||||| Sbjct: 1387 ccgaaggcagggctagtgactggagtgaagtcgtaacaa 1425
>gb|U24584.1|ETU24584 Ephedra trifurca chloroplast 16S rRNA gene, partial sequence Length = 1428 Score = 371 bits (187), Expect = 2e-99 Identities = 266/291 (91%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||| ||||||||||| ||||| |||||||||||| |||| ||||| |||||| ||| Sbjct: 1139 acacatgctacaatggccgggataaagggtcgcgacctcgtgagggcaagctaatctcaa 1198 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1199 aaacccggtctcagttcgaattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 1258 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1259 gtaatcgccggtcagccatacggcggtgaattcgttctcgggccttgtacacaccgcccg 1318 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1319 tcacactataggagttggccatgtttgaagtcttta-ccttaaccgtaaggagggggatg 1377 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtact 304 | ||||| || | | |||||||||||||||||||||||||||||||||| Sbjct: 1378 acaaaggcagggttagtgactggagtgaagtcgtaacaaggtagccgtact 1428
>gb|U24585.1|IMU24585 Isoetes melanopoda chloroplast 16S rRNA gene, partial sequence Length = 1452 Score = 369 bits (186), Expect = 7e-99 Identities = 274/302 (90%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||| | | |||||||| ||||||| || Sbjct: 1152 acacgtgctacaatggccgggacaaagggtcgcaaccccgcgagggcaagctaacctcag 1211 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 1212 aaacccggcctcagttcggattgcaggctgcaactcgcctgcacgaagccggaatcgcta 1271 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1272 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1331 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| ||| || ||| ||||||||| |||| | || ||| Sbjct: 1332 tcacactatgggagctggccatgcccgaaatcgtta-ccttaaccgcaaggggaggaatg 1390 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 || ||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1391 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1450 Query: 314 gg 315 || Sbjct: 1451 gg 1452
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 365 bits (184), Expect = 1e-97 Identities = 262/284 (92%), Gaps = 3/284 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 285 acacgtgctacaatggacgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 226 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 225 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 166 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 165 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 106 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| |||| | ||||| | ||||| ||| | Sbjct: 105 tcacactatgggagctggccatgcccgaagtcgttactc-taaccttttggaggaggacg 47 Query: 254 cctaaggctaggctt-gcgactggagtgaagtcgtaacaaggta 296 ||||||| ||| || | |||||| ||||||||||||||||||| Sbjct: 46 cctaagg-tagaattagtgactggggtgaagtcgtaacaaggta 4
>emb|Y10178.1|CPAC16SR A.cepa chloroplast 16S rRNA gene Length = 678 Score = 365 bits (184), Expect = 1e-97 Identities = 224/236 (94%), Gaps = 1/236 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 430 acacgtgctacaatgggcgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 489 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 490 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 549 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct: 550 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttatacacaccgcccg 609 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggg 249 |||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||| Sbjct: 610 tcacactacgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggg 664
>gb|AY212282.1| Dendrobium hybrid cultivar isolate ps122 16S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 375 Score = 363 bits (183), Expect = 4e-97 Identities = 198/203 (97%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 155 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 214 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 215 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 274 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 275 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 334 Query: 194 tcacactataggagctggccatg 216 ||||||||| ||||||||||||| Sbjct: 335 tcacactatgggagctggccatg 357
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 363 bits (183), Expect = 4e-97 Identities = 286/319 (89%), Gaps = 1/319 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| | ||||||||||||| || |||||| ||| Sbjct: 1202 acacgtgctacaatggccgggacaaagagatgcgatctcgcgagagtaagctaagctcaa 1261 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1262 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaaggtggaatcgcta 1321 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1381 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||| | | ||| ||||||| |||| |||||| ||||| | ||||||||||| Sbjct: 1382 tcacaccacggaagccggccatgcccaaagttgttaccc-taaccttcgggagggggatg 1440 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||| |||| | |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1441 cctaaggcagggctggtgactggggtgaagtcgtaacaaggtagccgtactggaaggtgc 1500 Query: 314 ggctggatcacctcctttt 332 ||||||||||||||||||| Sbjct: 1501 ggctggatcacctcctttt 1519
>gb|AY942965.1| Uncultured phototrophic eukaryote clone 39 16S ribosomal RNA gene, partial sequence; plastid Length = 964 Score = 363 bits (183), Expect = 4e-97 Identities = 247/267 (92%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 699 acacgtgctacaatggacgggacaaaggatcgcgatcccgcgagggggagctaactccaa 758 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 759 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 818 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 819 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 878 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 879 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 937 Query: 254 cctaaggctaggcttgcgactggagtg 280 || ||||| |||| | |||||||||| Sbjct: 938 ccgaaggcagggctagtgactggagtg 964
>gb|AY942941.1| Uncultured Flavobacterium sp. clone 7 16S ribosomal RNA gene, partial sequence Length = 961 Score = 363 bits (183), Expect = 4e-97 Identities = 247/267 (92%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||| Sbjct: 696 acacgtgctacaatggacgggacaaaggatcgcgatcccgcgagggggagctaactccaa 755 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 756 aaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 815 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 816 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 875 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 876 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 934 Query: 254 cctaaggctaggcttgcgactggagtg 280 || ||||| |||| | |||||||||| Sbjct: 935 ccgaaggcagggctagtgactggagtg 961
>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1430 Score = 363 bits (183), Expect = 4e-97 Identities = 263/287 (91%), Gaps = 2/287 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||| ||||| | |||||||| ||||||| ||| Sbjct: 1146 acacgtgctacaatggccgggacaaagggccgcgaccccgcgagggcaagctaacctcaa 1205 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1206 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1265 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1266 gtaatcgccggtcagccatacggcggtgaat-cgttcccgggccttgtacacaccgcccg 1324 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| || |||||| ||||||||||||| Sbjct: 1325 tcacactatgggagctggccatgcccgaagtcgttaacc-taaccgcaaggagggggatg 1383 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccg 300 || ||||| |||| | |||||||||||||||||||||||||||||| Sbjct: 1384 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccg 1430
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 363 bits (183), Expect = 4e-97 Identities = 256/279 (91%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| |||||||| ||| Sbjct: 1148 acacgtgctacaatggacgggacaaagggtcgcgaccccgcgagggcgagctaacctcaa 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaacccgacctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| || ||| ||||| |||||||||| || Sbjct: 1328 tcacactatgggagctggccatgcccgaagtcgttgccc-caaccgcaaggaggggggtg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 || ||||| |||| | |||||||||||||||||||||| Sbjct: 1387 ccgaaggcagggctagtgactggagtgaagtcgtaacaa 1425
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 363 bits (183), Expect = 4e-97 Identities = 256/279 (91%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1148 acacgtgctacaatggacgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaacccgacctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||| ||||| |||||||||| || Sbjct: 1328 tcacactatgggagctggccatgcccgaagtcgtta-cctcaaccgcaaggaggggggtg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 || ||||| |||| | |||||||||||||||||||||| Sbjct: 1387 ccgaaggcagggctagtgactggagtgaagtcgtaacaa 1425
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 361 bits (182), Expect = 2e-96 Identities = 249/270 (92%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| |||||| | |||||||||||||||||| ||| Sbjct: 1141 acacgtgctacaatggatgggacaaaggatcgcgaccccgcgagggtgagctaacttcaa 1200 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||||||| Sbjct: 1201 aaacctgtcctcagttcggattgtaggctgcaactcgcctacatgaagccggaatcgcta 1260 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1261 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1320 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||||||||| ||||||||||||| Sbjct: 1321 tcacactatgggagctggccatgcccgaagtcgtta-ccttaaccgcaaggagggggatg 1379 Query: 254 cctaaggctaggcttgcgactggagtgaag 283 || ||||| |||||| ||||||||||||| Sbjct: 1380 ccgaaggcagggcttgtgactggagtgaag 1409
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 361 bits (182), Expect = 2e-96 Identities = 249/273 (91%), Gaps = 1/273 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 1149 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgarctaactccmn 1208 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| Sbjct: 1209 aaacccgtcctcagttcggatttcaggctgcaactcscctgcatgaagccggaatcgcta 1268 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| Sbjct: 1269 gtaatcgccggtcagccatacggnggtgaattcgttcccggggcttgtacacaccgcccg 1328 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| || ||||||||| ||||||||||||| Sbjct: 1329 tcacactatgggagctggccatgcccgaagtcgnta-ccttaaccgcaaggagggggatg 1387 Query: 254 cctaaggctaggcttgcgactggagtgaagtcg 286 || ||||| |||| | |||||||||||||||| Sbjct: 1388 ccgaaggcagggctagtgactggagtgaagtcg 1420
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 359 bits (181), Expect = 7e-96 Identities = 265/289 (91%), Gaps = 3/289 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 334 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaaccccaa 275 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 274 aaacccgtcctcagttcggattgtaggctgcaactcgcctgcatgaagcaggaatcgcta 215 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 214 gtaatcgccggtca-ccatacggcggtgaattcgttcccgggccttgtacacaccgccca 156 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||| ||| |||||| ||| ||||||| ||||||||||||| Sbjct: 155 tcacactatgggagctggctatgcccgaagtcgtta-ccttaacaacaaggagggggatg 97 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgta 302 | ||||| |||| | |||||||||||||||||||||||||| ||||| Sbjct: 96 -caaaggcagggctagtgactggagtgaagtcgtaacaaggtaaccgta 49
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 355 bits (179), Expect = 1e-94 Identities = 297/333 (89%), Gaps = 5/333 (1%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||| ||| || | | |||||||| ||| ||| ||| Sbjct: 147805 acacgtgctacaatggtcgggacaatgggatgctaccccgcgagggcaagccaacctcaa 147746 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 147745 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaaggcggaatcgcta 147686 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 147685 gtaatcgcaggtcagccatactgcggtgaatccgttcccgggccttgtacacaccgcccg 147626 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgt---aaggaggggg 250 ||||||||| ||||||||||||| |||||| |||||| |||| | |||||||||| Sbjct: 147625 tcacactatgggagctggccatgcccgaagtcgttaccc-caaccttttgaaggaggggg 147567 Query: 251 atgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaagg 310 ||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 147566 atgccgaaggcggggctagtgactggagtgaagtcgtaacaaggtagccgtactggaagg 147507 Query: 311 tgcggctggatcacctccttttcagggagagct 343 |||||||||| ||||||| || ||||||||||| Sbjct: 147506 tgcggctggaccacctcc-ttccagggagagct 147475
>gb|U24595.1|TOU24595 Tmesipteris oblanceolata chloroplast 16S rRNA gene, partial sequence Length = 1436 Score = 347 bits (175), Expect = 3e-92 Identities = 254/279 (91%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| | |||||||| ||||||| ||| Sbjct: 1159 acacgtgctacaatggacgggacaaagggtcgcgaccccgcgagggcaagctaacctcaa 1218 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1219 aaacccgaccccagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1278 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1279 gtaatcgccggtcagccatacggcggtgaatacgttctcgggccttgtacacaccgcccg 1338 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||| ||||| |||||| |||||| |||||| ||||||||||||| Sbjct: 1339 tcacactatgggagctgaccatgcccgaagtcgttaccc-taaccgcaaggagggggatg 1397 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 || ||||| |||| | |||||||||||||||||||||| Sbjct: 1398 ccgaaggcagggctagtgactggagtgaagtcgtaacaa 1436
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 341 bits (172), Expect = 2e-90 Identities = 287/324 (88%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| || ||| || | ||||| | |||||||| ||||||| || Sbjct: 141129 acacgtgctacaatggccgaaacagagagccgcgaccccgcgagggcaagctaacctcag 141188 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 141189 aaactcggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 141248 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141249 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 141308 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| | ||||||||||| |||||| || |||||||| |||| | |||| Sbjct: 141309 tcacactacggaagctggccatgcccgaagtcgtt-ggcttaaccgcaaggggacagatg 141367 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||| |||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141368 cctaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtaccggaaggtgc 141427 Query: 314 ggctggatcacctccttttcaggg 337 |||||||||||||||||||||||| Sbjct: 141428 ggctggatcacctccttttcaggg 141451 Score = 341 bits (172), Expect = 2e-90 Identities = 287/324 (88%), Gaps = 1/324 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| || ||| || | ||||| | |||||||| ||||||| || Sbjct: 91722 acacgtgctacaatggccgaaacagagagccgcgaccccgcgagggcaagctaacctcag 91663 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 91662 aaactcggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 91603 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91602 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 91543 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| | ||||||||||| |||||| || |||||||| |||| | |||| Sbjct: 91542 tcacactacggaagctggccatgcccgaagtcgtt-ggcttaaccgcaaggggacagatg 91484 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||| |||| | ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 91483 cctaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtaccggaaggtgc 91424 Query: 314 ggctggatcacctccttttcaggg 337 |||||||||||||||||||||||| Sbjct: 91423 ggctggatcacctccttttcaggg 91400
>gb|AY563527.1| Camellia sinensis 16S ribosomal RNA gene, partial sequence Length = 699 Score = 341 bits (172), Expect = 2e-90 Identities = 193/200 (96%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 490 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgggctaactccaa 549 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 550 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 609 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 610 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 669 Query: 194 tcacactataggagctggcc 213 ||||||||| ||||| |||| Sbjct: 670 tcacactatgggagccggcc 689
>gb|AF244549.1|AF244549 Adiantum pedatum 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1484 Score = 341 bits (172), Expect = 2e-90 Identities = 278/312 (89%), Gaps = 1/312 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| || ||| || | ||||| | |||||||| ||||||| || Sbjct: 1174 acacgtgctacaatggccgaaacagagagccgcgaccccgcgagggcaagctaacctcag 1233 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1234 aaactcggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1293 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1294 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1353 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| | ||||||||||| |||||| || |||||||| ||||||| |||| Sbjct: 1354 tcacactacggaagctggccatgcccgaagtcgtt-ggcttaaccgcgaggagggagatg 1412 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 313 |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1413 cctaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtgc 1472 Query: 314 ggctggatcacc 325 |||||||||||| Sbjct: 1473 ggctggatcacc 1484
>gb|U24579.1|COU24579 Coleochaete orbicularis chloroplast 16S rRNA gene, partial sequence Length = 1617 Score = 341 bits (172), Expect = 2e-90 Identities = 285/320 (89%), Gaps = 2/320 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| || | ||| | || || | ||||| || Sbjct: 1140 acacgtgctacaatggccgggacaaagagttgtaatcctgagaaggctaactaacctcat 1199 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1200 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1259 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1260 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1319 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaa-ggagggggat 252 ||||||||| |||| |||||| | |||||| ||| | |||||||||| ||||| |||| Sbjct: 1320 tcacactatgggagttggccacgcccgaagtcgtta-ctttaaccgtaatggaggaggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1379 gccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 1438 Query: 313 cggctggatcacctcctttt 332 |||||||||||||||||||| Sbjct: 1439 cggctggatcacctcctttt 1458
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 339 bits (171), Expect = 6e-90 Identities = 284/319 (89%), Gaps = 2/319 (0%) Strand = Plus / Minus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcga-tctcgcgagggtgagctaactcca 72 |||||||||||||||| |||||||||| ||||| | ||| |||| | |||||| || Sbjct: 116329 acacgtgctacaatggccgggacaaagagtcgcaagtct-gcgaagacaagctaatctca 116271 Query: 73 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 116270 aaaacccggtctcagttcagattgcaggctgcaactcgcctgcatgaaggcggaatcgct 116211 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116210 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 116151 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || |||||||| |||| |||||| ||||||| | || | |||||||||| Sbjct: 116150 gtcacaccatgggagctggtcatgcccgaagtcgttaccctaacccttgtggagggggat 116091 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| |||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 116090 gccgaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtactggaaggtg 116031 Query: 313 cggctggatcacctccttt 331 ||||||||||||||||||| Sbjct: 116030 cggctggatcacctccttt 116012 Score = 339 bits (171), Expect = 6e-90 Identities = 284/319 (89%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcga-tctcgcgagggtgagctaactcca 72 |||||||||||||||| |||||||||| ||||| | ||| |||| | |||||| || Sbjct: 85659 acacgtgctacaatggccgggacaaagagtcgcaagtct-gcgaagacaagctaatctca 85717 Query: 73 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 85718 aaaacccggtctcagttcagattgcaggctgcaactcgcctgcatgaaggcggaatcgct 85777 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85778 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 85837 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || |||||||| |||| |||||| ||||||| | || | |||||||||| Sbjct: 85838 gtcacaccatgggagctggtcatgcccgaagtcgttaccctaacccttgtggagggggat 85897 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| |||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 85898 gccgaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtactggaaggtg 85957 Query: 313 cggctggatcacctccttt 331 ||||||||||||||||||| Sbjct: 85958 cggctggatcacctccttt 85976
>gb|U24588.1|LJU24588 Lygodium japonicum chloroplast 16S rRNA gene, partial sequence Length = 1437 Score = 339 bits (171), Expect = 6e-90 Identities = 262/291 (90%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| ||||||| |||||||||| | || ||||| ||||||| || Sbjct: 1148 acacgtgctacaatggccgggacagagggtcgcgaccccgtgagggcaagctaacctcag 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaactcggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcaccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| ||| ||||| |||||||||||| Sbjct: 1328 tcacactatgggagctggccatgcccgaagtcgtta-cctcaaccgcgaggagggggatg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtact 304 || ||||| |||| | ||||||||||||||||||||||||| |||||||| Sbjct: 1387 ccgaaggcagggctagtgactggagtgaagtcgtaacaaggttgccgtact 1437
>gb|DQ201846.1| Stevia rebaudiana 16S ribosomal RNA gene, partial sequence; plastid Length = 692 Score = 335 bits (169), Expect = 1e-88 Identities = 192/200 (96%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 487 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgggctaactccaa 546 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 547 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 606 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 607 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtncacaccgcccg 666 Query: 194 tcacactataggagctggcc 213 ||||||||| ||||| |||| Sbjct: 667 tcacactatgggagccggcc 686
>gb|DQ001755.1| Physcomitrella patens voucher P.M. McNutt 013 (FLDCI) 16S ribosomal RNA gene, partial sequence; tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast Length = 2405 Score = 331 bits (167), Expect = 2e-87 Identities = 213/227 (93%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 124 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 ggaatcgctagtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtac 61 Query: 184 acaccgcccgtcacactataggagctggccatgtttgaagtcattacccttaaccgtaag 243 ||||||||||||||||||| ||||||||||||| |||||| |||||| |||||| ||| Sbjct: 62 acaccgcccgtcacactatgggagctggccatgcccgaagtcgttaccc-taaccgcaag 120 Query: 244 gagggggatgcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtac 303 |||| ||||||| ||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct: 121 gaggaggatgccgaaggcagggctagtgactggagtgaagtcgtaacaaggtagccgtac 180 Query: 304 tggaaggtgcggctggatcacctccttttcagggagagctaatgctt 350 ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 181 tggaaggtgcggctggatcacctcctttttagggagagctaatgctt 227 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 472 agcttattatcctaggtcgtaacaa 496 ||||||||||||||||||| ||||| Sbjct: 270 agcttattatcctaggtcggaacaa 294
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 331 bits (167), Expect = 2e-87 Identities = 283/319 (88%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| || | ||| | || ||| | ||||| || Sbjct: 1148 acacgtgctacaatggccgggacaaagagttgtcatcctgagaaggttaactaacctcat 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaa-ggagggggat 252 ||||||||| |||| |||||| | |||||| ||| | |||||| ||| |||| |||| Sbjct: 1328 tcacactatgggagttggccacgcccgaagtcgtta-ctttaaccataatggagaaggat 1386 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1387 gccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 1446 Query: 313 cggctggatcacctccttt 331 ||||||||||||||||||| Sbjct: 1447 cggctggatcacctccttt 1465
>gb|AF393592.1| Coleochaete nitellarum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 331 bits (167), Expect = 2e-87 Identities = 283/319 (88%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| || | ||| | || | | | ||||| || Sbjct: 1146 acacgtgctacaatggccgggacaaagagttgtaatcctgagaagtttaactaacctcat 1205 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1206 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1265 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1266 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1325 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaa-ggagggggat 252 ||||||||| ||| |||||| | |||||| ||| | |||||||||| ||||| |||| Sbjct: 1326 tcacactatgggaattggccacgcccgaagtcgtta-ctttaaccgtaatggaggaggat 1384 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1385 gccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 1444 Query: 313 cggctggatcacctccttt 331 ||||||||||||||||||| Sbjct: 1445 cggctggatcacctccttt 1463
>gb|U24582.1|CGU24582 Cibotium glaucum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 331 bits (167), Expect = 2e-87 Identities = 252/279 (90%), Gaps = 1/279 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| | ||||| | |||||||| ||||||| || Sbjct: 1148 acacgtgctacaatggccgggacaaagagccgcgaccccgcgagggcaagctaacctcag 1207 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 |||| || |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1208 aaactcggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1267 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaatcgccggtcagccacacggcggtgaatccgttcccgggccttgtacacaccgcccg 1327 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 ||||||||| ||||||||||||| |||||| ||| |||||||| ||||||||||||| Sbjct: 1328 tcacactatgggagctggccatgcccgaagtcgtta-gcttaaccgcaaggagggggatg 1386 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaa 292 |||||||| |||| | |||||||||||||||||||||| Sbjct: 1387 cctaaggcagggctagtgactggagtgaagtcgtaacaa 1425
>gb|AY171318.1| Uncultured bacterium clone s47 16S ribosomal RNA gene, partial sequence Length = 1039 Score = 329 bits (166), Expect = 6e-87 Identities = 178/182 (97%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 858 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 917 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 918 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 977 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 978 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1037 Query: 194 tc 195 || Sbjct: 1038 tc 1039
>gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA gene, partial sequence Length = 1050 Score = 329 bits (166), Expect = 6e-87 Identities = 178/182 (97%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 869 acacgtgctacaatggccgggacaaagggtcgcgatcccgcgagggtgagctaactccaa 928 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 929 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 988 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 989 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1048 Query: 194 tc 195 || Sbjct: 1049 tc 1050
>gb|AF393595.1| Coleochaete scutata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1462 Score = 323 bits (163), Expect = 4e-85 Identities = 282/319 (88%), Gaps = 2/319 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| || | ||| | || ||| | ||||| || Sbjct: 1145 acacgtgctacaatggccgggacaaagagttgtcatcctgagaaggttaactaacctcat 1204 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1205 aaacccggtctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 1264 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1265 gtaatcgccggtcagccatacggcggtgaattcgttcccgggccttgtacacaccgcccg 1324 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaa-ggagggggat 252 ||||||||| |||| |||||| | |||||| ||| | |||||| ||| || | |||| Sbjct: 1325 tcacactatgggagttggccacgcccgaagtcgtta-ctttaaccataatggggaaggat 1383 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||| ||||| | ||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 gccgaaggcgaagctagtgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 1443 Query: 313 cggctggatcacctccttt 331 ||||||||||||||||||| Sbjct: 1444 cggctggatcacctccttt 1462
>gb|AF152609.1|AF152609 Pellia neesiana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 691 Score = 323 bits (163), Expect = 4e-85 Identities = 193/203 (95%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||||||||||| |||||||| | ||||||| ||| Sbjct: 424 acacgtgctacaatggccgggacaaagggtcgcgacctcgcgagaggaagctaacctcaa 483 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 484 aaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgcta 543 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 603 Query: 194 tcacactataggagctggccatg 216 ||||||||| ||||||||||||| Sbjct: 604 tcacactatgggagctggccatg 626
>gb|U24586.1|JVU24586 Juniperus virginiana chloroplast 16S rRNA gene, partial sequence Length = 1454 Score = 323 bits (163), Expect = 4e-85 Identities = 260/291 (89%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||||||||||||| |||||||||| || |||| | ||||||||| ||||||| ||| Sbjct: 1165 acacgtgctacaatggccgggacaaagagttgcgaccccgcgagggtaagctaacctcaa 1224 Query: 74 aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgcta 133 ||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1225 aaacctggcctcaattcggattgcaggctgcaactcgcctgcatgaagtaggaatcgcta 1284 Query: 134 gtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgcccg 193 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1285 gtaatcgccggtcagccatacggcggtgaattcgttctcgggccttgtacacaccgcccg 1344 Query: 194 tcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggatg 253 |||||||| | || |||||| | |||||||||| |||||||| |||||||| |||| Sbjct: 1345 tcacactagggaagtgtgccatgctcgaagtcatta-tcttaaccgcaaggagggagatg 1403 Query: 254 cctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtact 304 || ||||| |||| | |||||||||||||||||||||||||||||||||| Sbjct: 1404 cccaaggcacggctagtgactggagtgaagtcgtaacaaggtagccgtact 1454
>gb|AY672734.1| Microcystis sp. AICB 702 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 1746 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1056 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1115 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1116 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1175 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1176 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1234 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1235 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1293 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1294 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1353 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1354 tggctggatcacctcctt 1371
>gb|AY672732.1| Microcystis sp. AICB 688 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 1730 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1045 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1104 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1105 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1164 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1165 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1223 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1224 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1282 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1283 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1342 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1343 tggctggatcacctcctt 1360
>gb|AY672729.1| Microcystis sp. AICB 36 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 1746 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1057 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1116 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1117 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1176 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1177 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1235 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1236 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1294 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1295 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1354 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1355 tggctggatcacctcctt 1372
>gb|AY672728.1| Microcystis sp. AICB 35 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer and tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 1756 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1064 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1123 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1124 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1183 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1184 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1242 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1243 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1301 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1302 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1361 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1362 tggctggatcacctcctt 1379
>gb|AY672727.1| Microcystis sp. AICB 34 16S ribosomal RNA gene and 16S-23S ribosomal RNA intergenic spacer, partial sequence; and tRNA-Ile gene, complete sequence Length = 1745 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1071 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1130 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1131 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1190 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1191 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1249 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1250 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1308 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1309 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1368 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1369 tggctggatcacctcctt 1386
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 849 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 908 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 909 caaacccgacctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 968 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 969 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1027 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1028 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1086 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1087 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1146 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1147 tggctggatcacctcctt 1164
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 849 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 908 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 909 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 968 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 969 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1027 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1028 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1086 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1087 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1146 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1147 tggctggatcacctcctt 1164
>emb|AJ635434.1| Microcystis ichthyoblabe 0BB35S01 partial 16S rRNA gene Length = 1473 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1157 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1216 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1217 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1276 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1277 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1335 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1336 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1394 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1395 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1454 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1455 tggctggatcacctcctt 1472
>emb|AJ635433.1| Microcystis ichthyoblabe 0BB39S02 partial 16S rRNA gene Length = 1476 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1160 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1219 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1220 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1279 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1280 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1338 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1339 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1397 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1398 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1457 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1458 tggctggatcacctcctt 1475
>emb|AJ635432.1| Microcystis aeruginosa 0BF29S03 partial 16S rRNA gene Length = 1470 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1154 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1213 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1214 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1273 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1274 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1332 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1333 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1391 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1392 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1451 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1452 tggctggatcacctcctt 1469
>emb|AJ635431.1| Microcystis aeruginosa 0BF29S01 partial 16S rRNA gene Length = 1474 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1158 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1217 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1218 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1277 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1278 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1336 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1337 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1395 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1396 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1455 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1456 tggctggatcacctcctt 1473
>emb|AJ635430.1| Microcystis aeruginosa 0BB35S02 partial 16S rRNA gene Length = 1483 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1167 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1226 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1227 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1286 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1287 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1345 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1346 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1404 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1405 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1464 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1465 tggctggatcacctcctt 1482
>emb|AJ635429.1| Microcystis aeruginosa 1BB38S07 partial 16S rRNA gene Length = 1473 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1157 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1216 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1217 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1276 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1277 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1335 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1336 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1394 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1395 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1454 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1455 tggctggatcacctcctt 1472
>dbj|AB035553.1| Microcystis wesenbergii gene for 16S rRNA, partial sequence Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB035552.1| Microcystis viridis gene for 16S rRNA, partial sequence Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB035551.1| Microcystis novacekii gene for 16S rRNA, partial sequence Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB035550.1| Microcystis ichthyoblabe gene for 16S rRNA, partial sequence Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB035549.1| Microcystis aeruginosa gene for 16S rRNA, partial sequence Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012340.1| Microcystis aeruginosa gene for 16S rRNA, partial sequence, isolate: TAC170 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012339.1| Microcystis ichthyoblabe gene for 16S rRNA, partial sequence Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012337.1| Microcystis novacekii gene for 16S rRNA, partial sequence, isolate: TAC65 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012336.1| Microcystis novacekii gene for 16S rRNA, partial sequence, isolate: TAC20 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012335.1| Microcystis wesenbergii gene for 16S rRNA, partial sequence, isolate: TAC52 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012334.1| Microcystis wesenbergii gene for 16S rRNA, partial sequence, isolate: TAC38 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012333.1| Microcystis aeruginosa gene for 16S rRNA, partial sequence, isolate: TAC86 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| | ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcggagcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | |||||||||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgtaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456
>dbj|AB012332.1| Microcystis aeruginosa gene for 16S rRNA, partial sequence, isolate: TAC71 Length = 1457 Score = 321 bits (162), Expect = 1e-84 Identities = 282/318 (88%), Gaps = 3/318 (0%) Strand = Plus / Plus Query: 14 acacgtgctacaatgggcgggacaaagggtcgcgatctcgcgagggtgagctaactccaa 73 |||||| ||||||||| |||||||||||| |||| |||||||| | ||| || ||| Sbjct: 1141 acacgtactacaatggtcgggacaaagggcagcgaactcgcgagagccagcgaatcccag 1200 Query: 74 -aaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagcaggaatcgct 132 ||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| Sbjct: 1201 caaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaaggaggaatcgct 1260 Query: 133 agtaatcgccggtcagccatacggcggtgaatccgttcccgggccttgtacacaccgccc 192 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1261 agtaatcgccggtcagc-atacggcggtgaattcgttcccgggccttgtacacaccgccc 1319 Query: 193 gtcacactataggagctggccatgtttgaagtcattacccttaaccgtaaggagggggat 252 ||||||| || | |||||| || | |||||||||||| | ||||| |||||||||||| Sbjct: 1320 gtcacaccatggaagctggtcacgcccgaagtcattacc-tcaaccgcaaggagggggat 1378 Query: 253 gcctaaggctaggcttgcgactggagtgaagtcgtaacaaggtagccgtactggaaggtg 312 ||||||||| |||| | |||||| |||||||||||||||||||||||||| |||||||| Sbjct: 1379 gcctaaggcagggctagtgactggggtgaagtcgtaacaaggtagccgtaccggaaggtg 1438 Query: 313 cggctggatcacctcctt 330 ||||||||||||||||| Sbjct: 1439 tggctggatcacctcctt 1456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,376,547 Number of Sequences: 3902068 Number of extensions: 4376547 Number of successful extensions: 497567 Number of sequences better than 10.0: 126913 Number of HSP's better than 10.0 without gapping: 126397 Number of HSP's successfully gapped in prelim test: 553 Number of HSP's that attempted gapping in prelim test: 150499 Number of HSP's gapped (non-prelim): 291962 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
