ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd14o05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1271 bits (641), Expect = 0.0 Identities = 662/667 (99%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 120052 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 119995 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119994 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 119935 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119934 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119875 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119874 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119815 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119814 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119755 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119754 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119695 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119694 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119635 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119634 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119575 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119574 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119515 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119514 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119455 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119454 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 119395 Query: 662 tcactgc 668 ||||||| Sbjct: 119394 tcactgc 119388 Score = 1271 bits (641), Expect = 0.0 Identities = 662/667 (99%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 94842 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 94899 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94900 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 94959 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94960 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95019 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95020 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95079 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95080 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95139 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95140 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95199 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95200 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95259 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95260 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95319 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95320 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95379 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95380 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95439 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95440 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 95499 Query: 662 tcactgc 668 ||||||| Sbjct: 95500 tcactgc 95506
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 118833 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 118776 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118775 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 118716 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118715 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 118656 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118655 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 118596 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118595 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 118536 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118535 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 118476 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118475 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 118416 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118415 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 118356 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118355 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 118296 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118295 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 118236 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 118235 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 118176 Query: 662 tcactgc 668 ||||||| Sbjct: 118175 tcactgc 118169
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 119917 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 119860 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119859 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 119800 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119799 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119740 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119680 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119620 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119619 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119560 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119559 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119500 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119440 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119439 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119380 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119379 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119320 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119319 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 119260 Query: 662 tcactgc 668 ||||||| Sbjct: 119259 tcactgc 119253 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 95239 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 95296 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95297 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 95356 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95357 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95416 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95417 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95476 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95477 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95536 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95537 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95596 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95597 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95656 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95657 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95716 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95717 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95776 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95777 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95836 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95837 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 95896 Query: 662 tcactgc 668 ||||||| Sbjct: 95897 tcactgc 95903
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 119917 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 119860 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119859 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 119800 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119799 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119740 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119739 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119680 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119679 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119620 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119619 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119560 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119559 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119500 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119499 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119440 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119439 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119380 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119379 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119320 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119319 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 119260 Query: 662 tcactgc 668 ||||||| Sbjct: 119259 tcactgc 119253 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 95239 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 95296 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95297 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 95356 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95357 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95416 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95417 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95476 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95477 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95536 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95537 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95596 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95597 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95656 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95657 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95716 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95717 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95776 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95777 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95836 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95837 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 95896 Query: 662 tcactgc 668 ||||||| Sbjct: 95897 tcactgc 95903
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 119866 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 119809 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119808 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 119749 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119748 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119689 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119688 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119629 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119628 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119569 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119568 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119509 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119508 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119449 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119448 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119389 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119388 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119329 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119328 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119269 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119268 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 119209 Query: 662 tcactgc 668 ||||||| Sbjct: 119208 tcactgc 119202 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 95184 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 95241 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95242 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 95301 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95302 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95361 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95362 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95421 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95422 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95481 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95482 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95541 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95542 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95601 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95602 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95661 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95662 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95721 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95722 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95781 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95782 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 95841 Query: 662 tcactgc 668 ||||||| Sbjct: 95842 tcactgc 95848
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 31507817 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 31507874 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31507875 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 31507934 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507935 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 31507994 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507995 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 31508054 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508055 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 31508114 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31508115 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 31508174 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508175 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 31508234 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508235 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 31508294 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508295 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 31508354 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508355 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 31508414 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31508415 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 31508474 Query: 662 tcactgc 668 ||||||| Sbjct: 31508475 tcactgc 31508481
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 84779 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 84722 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 84721 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 84662 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84661 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 84602 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84601 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 84542 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84541 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 84482 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 84481 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 84422 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84421 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 84362 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84361 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 84302 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84301 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 84242 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84241 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 84182 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 84181 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 84122 Query: 662 tcactgc 668 ||||||| Sbjct: 84121 tcactgc 84115
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 119886 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 119829 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119828 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 119769 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119768 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119709 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119708 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119649 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119648 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119589 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119588 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119529 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119469 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119409 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119408 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119349 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119348 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119289 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119288 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 119229 Query: 662 tcactgc 668 ||||||| Sbjct: 119228 tcactgc 119222 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 95232 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 95289 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95290 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 95349 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95350 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95409 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95410 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95469 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95470 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95529 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95530 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95589 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95590 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95649 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95650 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95709 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95710 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95769 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95770 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95829 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95830 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 95889 Query: 662 tcactgc 668 ||||||| Sbjct: 95890 tcactgc 95896
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 122281 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 122338 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122339 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 122398 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122399 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 122458 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122459 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 122518 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122519 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 122578 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122579 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 122638 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122639 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 122698 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122699 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 122758 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122759 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 122818 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122819 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 122878 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 122879 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 122938 Query: 662 tcactgc 668 ||||||| Sbjct: 122939 tcactgc 122945 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 14006 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 14063 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14064 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 14123 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14124 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 14183 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14184 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 14243 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14244 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 14303 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14304 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 14363 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14364 gacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaag 14423 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14424 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 14483 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14484 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 14543 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14544 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 14603 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 14604 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 14663 Query: 662 tcactgc 668 ||||||| Sbjct: 14664 tcactgc 14670
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 58605 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 58548 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58547 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 58488 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58487 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 58428 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58427 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 58368 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58367 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 58308 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58307 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 58248 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58247 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 58188 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58187 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 58128 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58127 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 58068 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58067 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 58008 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 58007 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 57948 Query: 662 tcactgc 668 ||||||| Sbjct: 57947 tcactgc 57941
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 9268166 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 9268223 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9268224 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 9268283 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268284 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 9268343 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268344 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 9268403 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268404 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 9268463 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9268464 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 9268523 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268524 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 9268583 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268584 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 9268643 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268644 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 9268703 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268704 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 9268763 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9268764 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 9268823 Query: 662 tcactgc 668 ||||||| Sbjct: 9268824 tcactgc 9268830 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 9227666 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 9227723 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9227724 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 9227783 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227784 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 9227843 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227844 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 9227903 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227904 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 9227963 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9227964 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 9228023 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228024 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 9228083 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228084 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 9228143 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228144 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 9228203 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228204 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 9228263 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9228264 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 9228323 Query: 662 tcactgc 668 ||||||| Sbjct: 9228324 tcactgc 9228330 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 9164255 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 9164312 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9164313 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 9164372 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164373 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 9164432 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164433 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 9164492 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164493 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 9164552 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9164553 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 9164612 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164613 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 9164672 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164673 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 9164732 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164733 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 9164792 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164793 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 9164852 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9164853 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 9164912 Query: 662 tcactgc 668 ||||||| Sbjct: 9164913 tcactgc 9164919 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 9056080 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 9056137 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9056138 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 9056197 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056198 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 9056257 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056258 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 9056317 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056318 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 9056377 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9056378 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 9056437 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9056438 gacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaag 9056497 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056498 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 9056557 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056558 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 9056617 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056618 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 9056677 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9056678 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 9056737 Query: 662 tcactgc 668 ||||||| Sbjct: 9056738 tcactgc 9056744 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 496 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 19938151 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 19938208 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19938209 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 19938268 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938269 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 19938328 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938329 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 19938388 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938389 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 19938448 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19938449 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 19938508 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938509 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 19938568 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938569 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 19938628 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938629 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 19938688 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938689 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 19938748 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19938749 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 19938808 Query: 662 tcactgc 668 ||||||| Sbjct: 19938809 tcactgc 19938815 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 10277280 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 10277223 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10277222 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 10277163 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277162 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 10277103 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277102 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 10277043 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277042 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 10276983 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10276982 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 10276923 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276922 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 10276863 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276862 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 10276803 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276802 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 10276743 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276742 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 10276683 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10276682 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 10276623 Query: 662 tcactgc 668 ||||||| Sbjct: 10276622 tcactgc 10276616 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 10387018 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 10387075 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10387076 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 10387135 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387136 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 10387195 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387196 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 10387255 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387256 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 10387315 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10387316 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 10387375 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 10387435 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10387436 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaac 10387495 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387496 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 10387555 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 10387615 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10387616 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 10387675 Query: 662 tcactgc 668 ||||||| Sbjct: 10387676 tcactgc 10387682 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 454 agtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 ttgtgctgctaggcgaagcggttgagtgc 307 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 31598333 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 31598390 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31598391 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 31598450 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598451 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 31598510 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598511 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 31598570 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598571 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 31598630 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31598631 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 31598690 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598691 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 31598750 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598751 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 31598810 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598811 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 31598870 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598871 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 31598930 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 31598931 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 31598990 Query: 662 tcactgc 668 ||||||| Sbjct: 31598991 tcactgc 31598997
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 33525649 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 33525706 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 33525707 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 33525766 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525767 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 33525826 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525827 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 33525886 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525887 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 33525946 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 33525947 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 33526006 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526007 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 33526066 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526067 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 33526126 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526127 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 33526186 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526187 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 33526246 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 33526247 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 33526306 Query: 662 tcactgc 668 ||||||| Sbjct: 33526307 tcactgc 33526313 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 458 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 517 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 518 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 577 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 578 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 16677926 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 472 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 531 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 532 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 581 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 503 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttc 62 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 47892 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 47835 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 47834 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 47775 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47774 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 47715 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47714 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 47655 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47654 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 47595 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 47594 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 47535 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47534 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 47475 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47474 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 47415 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47414 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 47355 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47354 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 47295 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 47294 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 47235 Query: 662 tcactgc 668 ||||||| Sbjct: 47234 tcactgc 47228
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 70846 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 70903 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 70904 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 70963 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70964 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 71023 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71024 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 71083 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71084 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 71143 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71144 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 71203 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71204 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 71263 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71264 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 71323 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71324 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 71383 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71384 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 71443 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 71444 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 71503 Query: 662 tcactgc 668 ||||||| Sbjct: 71504 tcactgc 71510 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 18 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 75 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 135 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 195 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 255 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 315 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 316 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 375 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 435 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 495 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 555 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 615 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 616 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 675 Query: 662 tcactgc 668 ||||||| Sbjct: 676 tcactgc 682
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 19949427 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 19949484 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19949485 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 19949544 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949545 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 19949604 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949605 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 19949664 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949665 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 19949724 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19949725 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 19949784 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949785 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 19949844 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949845 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 19949904 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949905 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 19949964 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949965 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 19950024 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 19950025 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 19950084 Query: 662 tcactgc 668 ||||||| Sbjct: 19950085 tcactgc 19950091 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 10283319 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 10283262 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10283261 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 10283202 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283201 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 10283142 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283141 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 10283082 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283081 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 10283022 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10283021 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 10282962 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282961 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 10282902 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282901 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 10282842 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282841 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 10282782 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282781 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 10282722 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10282721 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 10282662 Query: 662 tcactgc 668 ||||||| Sbjct: 10282661 tcactgc 10282655 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 10393057 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 10393114 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10393115 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 10393174 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393175 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 10393234 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393235 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 10393294 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393295 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 10393354 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10393355 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 10393414 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393415 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 10393474 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 10393475 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaac 10393534 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393535 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 10393594 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393595 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 10393654 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 10393655 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 10393714 Query: 662 tcactgc 668 ||||||| Sbjct: 10393715 tcactgc 10393721 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 ttgtgctgctaggcgaagcggttgagtgc 307 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 119860 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 119803 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119802 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 119743 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119742 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 119683 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119682 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 119623 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119622 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 119563 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119562 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 119503 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119502 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 119443 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119442 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 119383 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119382 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 119323 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119322 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 119263 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 119262 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 119203 Query: 662 tcactgc 668 ||||||| Sbjct: 119202 tcactgc 119196 Score = 1249 bits (630), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 95179 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 95236 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95237 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 95296 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95297 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 95356 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95357 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 95416 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95417 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 95476 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95477 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 95536 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95537 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 95596 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95597 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 95656 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95657 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 95716 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95717 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 95776 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 95777 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 95836 Query: 662 tcactgc 668 ||||||| Sbjct: 95837 tcactgc 95843
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 963 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 906 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 905 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 846 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 845 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 786 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 726 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 666 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 665 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 606 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 546 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 486 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 426 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 366 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 365 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 306 Query: 662 tcactgc 668 ||||||| Sbjct: 305 tcactgc 299
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20241 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 20298 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20299 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 20358 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20359 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 20418 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20419 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 20478 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20479 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 20538 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20539 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 20598 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20599 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 20658 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20659 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 20718 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20719 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 20778 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20779 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 20838 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 20839 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 20898 Query: 662 tcactgc 668 ||||||| Sbjct: 20899 tcactgc 20905 Score = 1231 bits (621), Expect = 0.0 Identities = 657/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 44877 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 44820 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44819 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 44760 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44759 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 44700 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44699 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 44640 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44639 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 44580 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44579 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 44520 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44519 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 44460 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44459 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 44400 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44399 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 44340 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44339 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 44280 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||| Sbjct: 44279 tggttaagggaatggaaccctccggagccgtagtgaaagcgagtcttcatagggcgattg 44220 Query: 662 tcactgc 668 ||||||| Sbjct: 44219 tcactgc 44213
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1506 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 1449 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1448 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 1389 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1388 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 1329 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1328 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 1269 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 1209 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1208 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 1149 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1148 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 1089 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1088 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 1029 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1028 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 969 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 909 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 908 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 849 Query: 662 tcactgc 668 ||||||| Sbjct: 848 tcactgc 842
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123716 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 123659 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123658 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 123599 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123598 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 123539 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123538 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 123479 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123478 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 123419 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123418 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 123359 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123358 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 123299 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123298 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 123239 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123238 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 123179 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123178 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 123119 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123118 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 123059 Query: 662 tcactgc 668 ||||||| Sbjct: 123058 tcactgc 123052 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99121 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 99178 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99179 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 99238 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99239 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 99298 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99299 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 99358 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99359 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 99418 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99419 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 99478 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99479 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 99538 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99539 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 99598 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99599 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 99658 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99659 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 99718 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 99719 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 99778 Query: 662 tcactgc 668 ||||||| Sbjct: 99779 tcactgc 99785
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124433 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 124376 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 124375 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 124316 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124315 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 124256 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124255 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 124196 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124195 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 124136 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 124135 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 124076 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124075 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 124016 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124015 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 123956 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123955 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 123896 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123895 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 123836 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 123835 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 123776 Query: 662 tcactgc 668 ||||||| Sbjct: 123775 tcactgc 123769 Score = 1247 bits (629), Expect = 0.0 Identities = 659/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99798 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 99855 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99856 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 99915 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99916 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 99975 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99976 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 100035 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100036 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 100095 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 100096 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 100155 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100156 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 100215 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100216 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 100275 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100276 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 100335 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100336 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 100395 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 100396 tggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 100455 Query: 662 tcactgc 668 ||||||| Sbjct: 100456 tcactgc 100462
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 140814 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 140871 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 140872 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 140931 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140932 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 140991 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140992 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 141051 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141052 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 141111 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141112 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 141171 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141172 gacccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaag 141231 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141232 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 141291 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141292 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 141351 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141352 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 141411 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 141412 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 141471 Query: 662 tcactgc 668 ||||||| Sbjct: 141472 tcactgc 141478
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 93410 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 93467 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 93468 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 93527 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93528 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 93587 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93588 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 93647 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93648 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 93707 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 93708 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 93767 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93768 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 93827 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 93828 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaac 93887 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93888 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 93947 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93948 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 94007 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 94008 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 94067 Query: 662 tcactgc 668 ||||||| Sbjct: 94068 tcactgc 94074
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1241 bits (626), Expect = 0.0 Identities = 658/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 27474 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 27531 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27532 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 27591 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27592 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 27651 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27652 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 27711 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27712 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 27771 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27772 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 27831 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27832 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 27891 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 27892 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaac 27951 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27952 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 28011 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28012 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 28071 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 28072 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 28131 Query: 662 tcactgc 668 ||||||| Sbjct: 28132 tcactgc 28138
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1233 bits (622), Expect = 0.0 Identities = 657/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 9242115 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 9242058 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9242057 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 9241998 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241997 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 9241938 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 9241937 gaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaa 9241878 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241877 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 9241818 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9241817 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 9241758 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241757 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 9241698 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241697 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 9241638 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241637 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 9241578 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9241577 aaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggct 9241518 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9241517 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 9241458 Query: 662 tcactgc 668 ||||||| Sbjct: 9241457 tcactgc 9241451 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 161 actgaaacatcttagtagccagaggaaaagaaag 194 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1233 bits (622), Expect = 0.0 Identities = 657/667 (98%), Gaps = 2/667 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 53328 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 53271 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 53270 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 53211 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53210 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 53151 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 53150 gaggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaa 53091 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53090 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 53031 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 53030 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 52971 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52970 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 52911 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52910 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 52851 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52850 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 52791 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 52790 aaagtgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggct 52731 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52730 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattg 52671 Query: 662 tcactgc 668 ||||||| Sbjct: 52670 tcactgc 52664
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1185 bits (598), Expect = 0.0 Identities = 654/668 (97%), Gaps = 4/668 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgct 60 |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 123656 gcggtggatacctagg-cacccagag-acgaggaagaggcgtagcaagcgacgaaatgct 123599 Query: 61 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaact 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123598 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaact 123539 Query: 121 gcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123538 gcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 123479 Query: 181 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123478 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 123419 Query: 241 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123418 aaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggt 123359 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||| Sbjct: 123358 tgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctc 123300 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123299 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 123240 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123239 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 123180 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123179 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 123120 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123119 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 123060 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123059 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 123000 Query: 661 gtcactgc 668 |||||||| Sbjct: 122999 gtcactgc 122992 Score = 1185 bits (598), Expect = 0.0 Identities = 654/668 (97%), Gaps = 4/668 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgct 60 |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 99081 gcggtggatacctagg-cacccagag-acgaggaagaggcgtagcaagcgacgaaatgct 99138 Query: 61 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaact 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99139 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaact 99198 Query: 121 gcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99199 gcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 99258 Query: 181 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99259 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 99318 Query: 241 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99319 aaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggt 99378 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||| Sbjct: 99379 tgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctc 99437 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99438 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 99497 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99498 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 99557 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99558 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 99617 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99618 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 99677 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99678 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 99737 Query: 661 gtcactgc 668 |||||||| Sbjct: 99738 gtcactgc 99745
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1185 bits (598), Expect = 0.0 Identities = 654/668 (97%), Gaps = 4/668 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgct 60 |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 5434 gcggtggatacctagg-cacccagag-acgaggaagaggcgtagcaagcgacgaaatgct 5491 Query: 61 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaact 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5492 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaact 5551 Query: 121 gcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5552 gcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 5611 Query: 181 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5612 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 5671 Query: 241 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 5672 aaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggt 5731 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||| Sbjct: 5732 tgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctc 5790 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5791 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 5850 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5851 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 5910 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5911 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 5970 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5971 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 6030 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 6031 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 6090 Query: 661 gtcactgc 668 |||||||| Sbjct: 6091 gtcactgc 6098
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1185 bits (598), Expect = 0.0 Identities = 654/668 (97%), Gaps = 4/668 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaag-ggcgtagcaagcgacgaaatgct 60 |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 22 gcggtggatacctagg-cacccagag-acgaggaagaggcgtagcaagcgacgaaatgct 79 Query: 61 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaact 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 80 tcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaact 139 Query: 121 gcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gcctgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcc 199 Query: 181 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 agaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagccta 259 Query: 241 aaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt 300 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 260 aaccgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggt 319 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||| Sbjct: 320 tgagtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctc 378 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 438 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 498 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 558 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 618 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 619 ttggttaagggaatggaacccaccggagccgtagcgaaagcgagtcttcatagggcgatt 678 Query: 661 gtcactgc 668 |||||||| Sbjct: 679 gtcactgc 686
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1152 bits (581), Expect = 0.0 Identities = 607/614 (98%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 15 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 72 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 73 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 132 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 192 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 193 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 252 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 312 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 313 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 372 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 432 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 492 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 552 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 612 Query: 602 tggttaagggaacg 615 |||||||||||||| Sbjct: 613 tggttaagggaacg 626
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1144 bits (577), Expect = 0.0 Identities = 586/589 (99%) Strand = Plus / Plus Query: 80 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 139 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 140 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 200 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 260 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 320 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 379 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 380 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 440 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 500 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 560 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 540 Query: 620 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 541 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 589
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1128 bits (569), Expect = 0.0 Identities = 581/585 (99%) Strand = Plus / Plus Query: 30 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 90 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 149 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 150 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 210 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 270 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 329 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 330 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 389 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 390 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 450 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 510 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 569 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 570 aagaatgagccggcgactcataggcagtggcttggttaagggaac 614 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcataggcagtggcttggttaagggaac 585
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1128 bits (569), Expect = 0.0 Identities = 581/585 (99%) Strand = Plus / Plus Query: 84 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 143 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 264 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 324 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 383 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 384 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 444 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 504 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 564 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 623 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccac 540 Query: 624 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 541 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 585
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1035 bits (522), Expect = 0.0 Identities = 633/666 (95%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134202 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 134145 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 134144 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 134085 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134084 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 134026 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134025 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 133966 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 133965 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 133906 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 133905 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 133846 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133845 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 133786 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133785 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 133726 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 133725 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 133669 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133668 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 133609 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133608 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgt 133554 Query: 663 cactgc 668 |||||| Sbjct: 133553 cactgc 133548 Score = 1035 bits (522), Expect = 0.0 Identities = 633/666 (95%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103769 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 103826 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 103827 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 103886 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103887 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 103945 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103946 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104005 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 104006 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 104065 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 104066 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 104125 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104126 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 104185 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104186 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 104245 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 104246 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 104302 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104303 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104362 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104363 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgt 104417 Query: 663 cactgc 668 |||||| Sbjct: 104418 cactgc 104423
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 1019 bits (514), Expect = 0.0 Identities = 631/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 139565 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 139508 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139507 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 139448 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139447 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 139389 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139388 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 139329 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 139328 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 139269 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||| Sbjct: 139268 agtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctg 139209 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139208 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 139149 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 139089 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 139088 cccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggaga 139032 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139031 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 138972 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 138971 ggttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgt 138917 Query: 663 cactgc 668 |||||| Sbjct: 138916 cactgc 138911 Score = 1019 bits (514), Expect = 0.0 Identities = 631/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110380 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 110437 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 110438 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 110497 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110498 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 110556 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110557 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 110616 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 110617 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 110676 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||||||||||| | |||||||||||||||||||||||| ||||| |||||| Sbjct: 110677 agtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctg 110736 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110737 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 110796 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110797 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 110856 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 110857 cccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggaga 110913 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110914 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 110973 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||| Sbjct: 110974 ggttaag-----ggaacccaccggagccatagcgaaagcgagtcttcatagggcaattgt 111028 Query: 663 cactgc 668 |||||| Sbjct: 111029 cactgc 111034
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 1019 bits (514), Expect = 0.0 Identities = 631/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 127843 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 127786 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 127785 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 127726 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127725 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 127667 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 127666 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 127607 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 127606 ccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgg 127547 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||| Sbjct: 127546 agtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctg 127487 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127486 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 127427 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127426 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 127367 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 127366 cccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggaga 127310 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127309 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 127250 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 127249 ggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgt 127195 Query: 663 cactgc 668 |||||| Sbjct: 127194 cactgc 127189 Score = 1019 bits (514), Expect = 0.0 Identities = 631/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107079 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 107136 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 107137 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 107196 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107197 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 107255 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107256 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 107315 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 107316 ccgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgg 107375 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||| ||||||||||||| |||||| Sbjct: 107376 agtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctg 107435 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107436 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 107495 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107496 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 107555 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 107556 cccatcggggagtgaaatagaacatgaaaccgtg---agctcccaagcagtgggaggaga 107612 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107613 atgtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 107672 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||||||| |||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 107673 ggttaagggaat-----ccaccgtagccgtagcgaaagcgagtcttcatagggcgattgt 107727 Query: 663 cactgc 668 |||||| Sbjct: 107728 cactgc 107733
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1011 bits (510), Expect = 0.0 Identities = 630/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 142087 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 142030 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct: 142029 ggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc 141970 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141969 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 141911 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141910 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 141851 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 141850 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttg 141791 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||| Sbjct: 141790 agtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctg 141731 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 141730 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 141671 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141670 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 141611 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 141610 cccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggaga 141554 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141553 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 141494 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 141493 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 141439 Query: 663 cactgc 668 |||||| Sbjct: 141438 cactgc 141433 Score = 1011 bits (510), Expect = 0.0 Identities = 630/666 (94%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111570 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 111627 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct: 111628 ggggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc 111687 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111688 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 111746 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111747 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 111806 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 111807 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttg 111866 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||||||||||| | ||||||||| |||||||||||||| ||||| |||||| Sbjct: 111867 agtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctg 111926 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 111927 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 111986 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111987 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 112046 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 112047 cccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggaga 112103 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112104 atttgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 112163 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 112164 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 112218 Query: 663 cactgc 668 |||||| Sbjct: 112219 cactgc 112224
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 15/666 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 134960 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 134903 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 134902 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 134843 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134842 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 134784 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134783 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 134724 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 134723 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 134664 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 134663 agtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttcta 134604 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134603 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 134544 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134543 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 134484 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 134483 cccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggaga 134427 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134426 a----atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 134371 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 134370 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 134316 Query: 663 cactgc 668 |||||| Sbjct: 134315 cactgc 134310 Score = 1001 bits (505), Expect = 0.0 Identities = 629/666 (94%), Gaps = 15/666 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 105322 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 105379 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 105380 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 105439 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105440 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105498 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105499 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105558 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 105559 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 105618 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| Sbjct: 105619 agtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttcta 105678 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105679 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105738 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105739 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 105798 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| || Sbjct: 105799 cccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggaga 105855 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105856 a----atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 105911 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 105912 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 105966 Query: 663 cactgc 668 |||||| Sbjct: 105967 cactgc 105972
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 997 bits (503), Expect = 0.0 Identities = 629/666 (94%), Gaps = 13/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 136570 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 136513 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 136512 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc 136453 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136452 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136394 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136393 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136334 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 136333 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 136274 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 136273 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 136214 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136213 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 136154 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136153 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 136094 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136093 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 136037 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136036 caggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135979 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 135978 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 135924 Query: 663 cactgc 668 |||||| Sbjct: 135923 cactgc 135918 Score = 997 bits (503), Expect = 0.0 Identities = 629/666 (94%), Gaps = 13/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 105855 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 105912 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 105913 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc 105972 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105973 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106031 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106091 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 106092 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 106151 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 106152 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 106211 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106212 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106271 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106272 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106331 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106332 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106388 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106389 caggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106446 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 106447 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 106501 Query: 663 cactgc 668 |||||| Sbjct: 106502 cactgc 106507
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 979 bits (494), Expect = 0.0 Identities = 627/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 132754 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 132697 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 132696 ggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc 132637 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132636 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132578 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132577 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 132518 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 132517 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtag 132458 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 132457 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 132398 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132397 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 132338 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132337 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 132278 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132277 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 132221 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132220 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 132162 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132161 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 132107 Query: 663 cactgc 668 |||||| Sbjct: 132106 cactgc 132101 Score = 979 bits (494), Expect = 0.0 Identities = 627/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 104124 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 104181 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 104182 ggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc 104241 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104242 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 104300 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104301 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104360 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 104361 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtag 104420 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104421 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 104480 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104481 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 104540 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104541 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 104600 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104601 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 104657 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104658 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104716 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 104717 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 104771 Query: 663 cactgc 668 |||||| Sbjct: 104772 cactgc 104777
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 979 bits (494), Expect = 0.0 Identities = 627/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 132977 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 132920 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 132919 ggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc 132860 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132859 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132801 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132800 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 132741 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 132740 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgg 132681 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 132680 agtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctg 132621 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132620 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 132561 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132560 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 132501 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132500 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag- 132445 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132444 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 132385 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132384 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 132330 Query: 663 cactgc 668 |||||| Sbjct: 132329 cactgc 132324 Score = 979 bits (494), Expect = 0.0 Identities = 627/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 103787 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 103844 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 103845 ggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc 103904 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103905 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 103963 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103964 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104023 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 104024 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgg 104083 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 104084 agtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctg 104143 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104144 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 104203 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104204 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 104263 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104264 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag- 104319 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104320 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104379 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 104380 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 104434 Query: 663 cactgc 668 |||||| Sbjct: 104435 cactgc 104440
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 979 bits (494), Expect = 0.0 Identities = 627/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 132747 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 132690 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 132689 ggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc 132630 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132629 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 132571 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132570 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 132511 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 132510 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtag 132451 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 132450 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 132391 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132390 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 132331 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132330 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 132271 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132270 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 132214 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132213 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 132155 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 132154 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 132100 Query: 663 cactgc 668 |||||| Sbjct: 132099 cactgc 132094 Score = 979 bits (494), Expect = 0.0 Identities = 627/666 (94%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 104122 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 104179 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 104180 ggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc 104239 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104240 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 104298 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104299 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104358 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 104359 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtag 104418 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 104419 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 104478 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104479 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 104538 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104539 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 104598 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104599 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 104655 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104656 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 104714 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 104715 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 104769 Query: 663 cactgc 668 |||||| Sbjct: 104770 cactgc 104775
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 971 bits (490), Expect = 0.0 Identities = 626/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 131646 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 131589 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 131588 ggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc 131529 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131528 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 131470 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131469 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131410 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 131409 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtag 131350 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 131349 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 131290 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131289 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 131230 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131229 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 131170 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131169 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 131113 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131112 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 131054 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 131053 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 130999 Query: 663 cactgc 668 |||||| Sbjct: 130998 cactgc 130993 Score = 971 bits (490), Expect = 0.0 Identities = 626/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 102989 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 103046 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 103047 ggggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc 103106 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103107 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 103165 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103166 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 103225 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 103226 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtag 103285 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 103286 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 103345 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103346 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 103405 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 103406 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 103465 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 103466 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 103522 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103523 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 103581 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 103582 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 103636 Query: 663 cactgc 668 |||||| Sbjct: 103637 cactgc 103642
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 971 bits (490), Expect = 0.0 Identities = 626/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 133938 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 133881 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 133880 ggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc 133821 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133820 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 133762 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133761 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 133702 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| | Sbjct: 133701 ccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgg 133642 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 133641 agtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctg 133582 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133581 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 133522 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133521 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 133462 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133461 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag- 133406 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133405 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 133346 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 133345 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 133291 Query: 663 cactgc 668 |||||| Sbjct: 133290 cactgc 133285 Score = 971 bits (490), Expect = 0.0 Identities = 626/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 104711 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 104768 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 104769 ggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc 104828 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104829 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 104887 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104888 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 104947 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| | Sbjct: 104948 ccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgg 105007 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 105008 agtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctg 105067 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105068 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105127 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105128 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 105187 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105188 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag- 105243 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105244 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 105303 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 105304 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 105358 Query: 663 cactgc 668 |||||| Sbjct: 105359 cactgc 105364
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 963 bits (486), Expect = 0.0 Identities = 625/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 140339 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 140282 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 140281 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 140222 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140221 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 140163 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140162 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 140103 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 140102 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcgg 140043 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 140042 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 139983 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139982 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 139923 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139922 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 139863 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 139862 cccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag- 139807 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139806 acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 139747 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 139746 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 139692 Query: 663 cactgc 668 |||||| Sbjct: 139691 cactgc 139686 Score = 963 bits (486), Expect = 0.0 Identities = 625/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 109721 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 109778 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109779 ggggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc 109838 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109839 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 109897 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109898 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 109957 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct: 109958 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcgg 110017 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 110018 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 110077 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110078 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 110137 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110138 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 110197 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 110198 cccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag- 110253 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110254 acgggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 110313 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 110314 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 110368 Query: 663 cactgc 668 |||||| Sbjct: 110369 cactgc 110374
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 963 bits (486), Expect = 0.0 Identities = 625/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 20 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 77 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 78 ggggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc 137 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 196 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 256 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| | Sbjct: 257 ccgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgg 316 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| Sbjct: 317 agtgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctg 376 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 436 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 437 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 496 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 497 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag- 552 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 ccctgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 612 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 613 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 667 Query: 663 cactgc 668 |||||| Sbjct: 668 cactgc 673
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 117 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 177 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 237 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 297 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 356 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 357 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 417 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 477 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 537 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 596 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 597 tggcttggtt 606 |||||||||| Sbjct: 481 tggcttggtt 490
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 955 bits (482), Expect = 0.0 Identities = 624/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 87 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 326 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 506 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 562 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 ccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 621 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 622 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgt 676 Query: 663 cactgc 668 |||||| Sbjct: 677 cactgc 682
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 136279 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 136222 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136221 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 136162 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136161 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136103 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136102 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136043 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136042 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 135983 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135982 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 135923 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135922 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135863 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135862 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135803 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135802 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135746 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135745 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135688 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 135687 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 135633 Query: 662 tcactgc 668 ||||||| Sbjct: 135632 tcactgc 135626 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 106351 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 106408 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106409 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 106468 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106527 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106528 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106587 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106588 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 106647 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106648 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 106707 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106708 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106767 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106768 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106827 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106828 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106884 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106885 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106942 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106943 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106997 Query: 662 tcactgc 668 ||||||| Sbjct: 106998 tcactgc 107004
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 136917 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 136860 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136859 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 136800 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136799 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136741 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136740 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136681 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 136680 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 136621 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 136620 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 136561 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136560 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 136501 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 136500 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 136441 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136440 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 136384 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136383 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 136326 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 136325 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 136271 Query: 662 tcactgc 668 ||||||| Sbjct: 136270 tcactgc 136264 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 106640 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 106697 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106698 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 106757 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106758 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106816 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106817 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106876 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106877 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 106936 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106937 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 106996 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106997 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 107056 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 107057 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 107116 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 107117 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 107173 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107174 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 107231 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 107232 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 107286 Query: 662 tcactgc 668 ||||||| Sbjct: 107287 tcactgc 107293
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 1545 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 1602 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1603 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 1662 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 1721 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1722 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 1781 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 1782 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 1841 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1842 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 1901 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1902 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 1961 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1962 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 2021 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2022 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 2078 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2079 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 2136 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2137 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 2191 Query: 662 tcactgc 668 ||||||| Sbjct: 2192 tcactgc 2198
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 135525 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 135468 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135467 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 135408 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135407 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135349 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135348 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135289 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135288 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 135229 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135228 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 135169 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135168 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135109 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135108 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135049 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135048 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 134992 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134991 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 134934 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 134933 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 134879 Query: 662 tcactgc 668 ||||||| Sbjct: 134878 tcactgc 134872 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 105511 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 105568 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105569 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 105628 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105629 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105687 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105688 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105747 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 105748 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 105807 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105808 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 105867 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105868 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 105927 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105928 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 105987 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105988 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106044 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106045 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106102 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106103 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106157 Query: 662 tcactgc 668 ||||||| Sbjct: 106158 tcactgc 106164
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 135660 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 135603 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135602 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 135543 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135542 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135484 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135483 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135424 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135423 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 135364 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135363 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 135304 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135303 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135244 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135243 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135184 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135183 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135127 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135126 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135069 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 135068 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 135014 Query: 662 tcactgc 668 ||||||| Sbjct: 135013 tcactgc 135007 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 105683 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 105740 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105741 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 105800 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105801 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105859 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105860 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105919 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 105920 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 105979 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105980 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 106039 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106040 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106099 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106100 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106159 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106160 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106216 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106217 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106274 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106275 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106329 Query: 662 tcactgc 668 ||||||| Sbjct: 106330 tcactgc 106336
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 135658 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 135601 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135600 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 135541 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135482 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135481 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135422 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135421 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 135362 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135361 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 135302 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135301 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135242 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135241 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135182 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135181 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135125 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135124 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135067 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 135066 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 135012 Query: 662 tcactgc 668 ||||||| Sbjct: 135011 tcactgc 135005 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 105680 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 105737 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105738 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 105797 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105798 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105856 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105916 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 105917 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 105976 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105977 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 106036 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106037 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106096 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106097 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106156 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106157 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106213 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106214 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106271 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106272 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106326 Query: 662 tcactgc 668 ||||||| Sbjct: 106327 tcactgc 106333
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 135570 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 135513 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135512 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 135453 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135452 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135394 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135393 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135334 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135333 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 135274 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135273 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 135214 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135213 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135154 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135153 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135094 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135093 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135037 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135036 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 134979 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 134978 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 134924 Query: 662 tcactgc 668 ||||||| Sbjct: 134923 tcactgc 134917 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 105558 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 105615 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105616 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 105675 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105676 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105734 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105735 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105794 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 105795 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 105854 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105855 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 105914 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105915 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 105974 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105975 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106034 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106035 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106091 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106149 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106150 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106204 Query: 662 tcactgc 668 ||||||| Sbjct: 106205 tcactgc 106211
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 136277 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 136220 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136219 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 136160 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136159 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 136101 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136100 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136041 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 136040 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 135981 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135980 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 135921 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135920 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135861 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135860 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135801 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135800 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135744 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135743 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135686 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 135685 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 135631 Query: 662 tcactgc 668 ||||||| Sbjct: 135630 tcactgc 135624 Score = 952 bits (480), Expect = 0.0 Identities = 625/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 106349 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 106406 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106407 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 106466 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106467 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106525 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106526 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106585 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106586 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 106645 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106646 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 106705 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106706 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106765 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106766 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106825 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106826 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106882 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106883 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106940 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106941 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106995 Query: 662 tcactgc 668 ||||||| Sbjct: 106996 tcactgc 107002
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 944 bits (476), Expect = 0.0 Identities = 624/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 136008 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 135951 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 135950 ggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc 135891 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135832 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135831 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135772 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 135771 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 135712 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135711 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 135652 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135651 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135592 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135591 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135532 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135531 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135475 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135474 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 135417 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 135416 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 135362 Query: 662 tcactgc 668 ||||||| Sbjct: 135361 tcactgc 135355 Score = 944 bits (476), Expect = 0.0 Identities = 624/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 106130 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 106187 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 106188 ggggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc 106247 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106248 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106306 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106307 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106366 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 106367 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 106426 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106427 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 106486 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106487 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 106546 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 106547 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106606 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106607 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106663 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106664 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 106721 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106722 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106776 Query: 662 tcactgc 668 ||||||| Sbjct: 106777 tcactgc 106783
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 944 bits (476), Expect = 0.0 Identities = 624/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 135537 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 135480 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135479 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 135420 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135419 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135361 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135360 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135301 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135300 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 135241 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135240 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 135181 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135180 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 135121 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 135120 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 135061 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135060 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 135004 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135003 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggct 134946 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 134945 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 134891 Query: 662 tcactgc 668 ||||||| Sbjct: 134890 tcactgc 134884 Score = 944 bits (476), Expect = 0.0 Identities = 624/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 105525 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 105582 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105583 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 105642 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105643 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 105701 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105702 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 105761 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 105762 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcct 105821 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 105822 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctct 105881 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105882 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 105941 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 105942 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 106001 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106002 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 106058 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106059 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggct 106116 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 106117 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 106171 Query: 662 tcactgc 668 ||||||| Sbjct: 106172 tcactgc 106178
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 942 bits (475), Expect = 0.0 Identities = 624/667 (93%), Gaps = 13/667 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 21 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 78 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 79 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 138 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139 -tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccag 197 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 198 aggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaa 257 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 258 accgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtg 317 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 318 aagtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctct 377 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 437 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 438 gctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaac 497 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 498 ccccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 554 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 cctg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 613 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 614 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 668 Query: 662 tcactgc 668 ||||||| Sbjct: 669 tcactgc 675
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 940 bits (474), Expect = 0.0 Identities = 622/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 106026 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 106083 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 106084 ggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 106143 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106144 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106202 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106203 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106262 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 106263 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 106322 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 106323 agtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 106382 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106383 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106442 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 106443 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 106502 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106503 cccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag- 106558 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106559 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106618 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106619 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgt 106673 Query: 663 cactgc 668 |||||| Sbjct: 106674 cactgc 106679 Score = 890 bits (449), Expect = 0.0 Identities = 621/669 (92%), Gaps = 15/669 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 135883 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 135826 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 135825 ggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 135766 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135765 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135707 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135706 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135647 Query: 243 ccgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || Sbjct: 135646 ccgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtg 135587 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctc 360 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| | | | Sbjct: 135586 gagtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccc 135527 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgca 419 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 135526 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgca 135467 Query: 420 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 479 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 135466 aggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaaga 135407 Query: 480 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| Sbjct: 135406 acccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggagg 135350 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 | | | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135349 ag-acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 135291 Query: 600 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||||| |||||||||||||||||||||||||||||||||| || |||| || Sbjct: 135290 cttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaat 135236 Query: 660 tgtcactgc 668 ||||||||| Sbjct: 135235 tgtcactgc 135227
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 940 bits (474), Expect = 0.0 Identities = 622/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 136159 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 136102 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 136101 ggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 136042 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136041 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 135983 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135982 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 135923 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 135922 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 135863 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 135862 agtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 135803 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135802 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135743 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 135742 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 135683 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 135682 cccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag- 135627 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135626 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 135567 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 135566 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgt 135512 Query: 663 cactgc 668 |||||| Sbjct: 135511 cactgc 135506 Score = 940 bits (474), Expect = 0.0 Identities = 622/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 106248 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 106305 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 106306 ggggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 106365 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106366 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 106424 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106425 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 106484 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 106485 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgg 106544 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 |||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 106545 agtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 106604 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106605 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106664 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 106665 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 106724 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106725 cccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag- 106780 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106781 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 106840 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| || |||| ||||| Sbjct: 106841 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatggggcaattgt 106895 Query: 663 cactgc 668 |||||| Sbjct: 106896 cactgc 106901
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 934 bits (471), Expect = 0.0 Identities = 477/479 (99%) Strand = Plus / Plus Query: 190 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 250 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 310 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 369 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 370 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 430 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 490 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 ggaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 479
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 932 bits (470), Expect = 0.0 Identities = 621/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| Sbjct: 131770 cggtggatacctagg-cacccagag-acgaggaagggcgtattaatcgacgaaatgcttc 131713 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | Sbjct: 131712 ggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc 131653 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131652 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 131594 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131593 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131534 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || | Sbjct: 131533 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtgg 131474 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 131473 agtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctg 131414 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131413 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 131354 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131353 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 131294 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 131293 cccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg 131237 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131236 accaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 131178 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 131177 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 131123 Query: 663 cactgc 668 |||||| Sbjct: 131122 cactgc 131117 Score = 932 bits (470), Expect = 0.0 Identities = 621/666 (93%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| Sbjct: 101675 cggtggatacctagg-cacccagag-acgaggaagggcgtattaatcgacgaaatgcttc 101732 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | Sbjct: 101733 ggggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc 101792 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101793 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 101851 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101852 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 101911 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || | Sbjct: 101912 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtgg 101971 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 101972 agtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctg 102031 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102032 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 102091 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 102092 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 102151 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| Sbjct: 102152 cccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg 102208 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | || | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102209 accaga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 102267 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 102268 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 102322 Query: 663 cactgc 668 |||||| Sbjct: 102323 cactgc 102328
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 930 bits (469), Expect = 0.0 Identities = 475/477 (99%) Strand = Plus / Plus Query: 192 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 252 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 312 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 371 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 372 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 432 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 492 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 612 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 477
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 930 bits (469), Expect = 0.0 Identities = 475/477 (99%) Strand = Plus / Plus Query: 192 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 252 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 312 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 371 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 372 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 432 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 492 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 612 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 aacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 477
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 928 bits (468), Expect = 0.0 Identities = 622/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 139483 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 139426 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139425 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc 139366 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 139365 -tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgg 139307 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139306 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 139247 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 139246 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtga 139187 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 139186 agtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctg 139127 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139126 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 139067 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 139066 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 139007 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gg 541 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139006 cccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 138950 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138949 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 138892 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 138891 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 138837 Query: 662 tcactgc 668 ||||||| Sbjct: 138836 tcactgc 138830 Score = 928 bits (468), Expect = 0.0 Identities = 622/667 (93%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 109614 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 109671 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109672 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc 109731 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 109732 -tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgg 109790 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109791 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 109850 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct: 109851 ccgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtga 109910 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||||| |||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 109911 agtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctg 109970 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109971 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 110030 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110031 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 110090 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gg 541 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110091 cccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 110147 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110148 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 110205 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 110206 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 110260 Query: 662 tcactgc 668 ||||||| Sbjct: 110261 tcactgc 110267
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 928 bits (468), Expect = 0.0 Identities = 474/476 (99%) Strand = Plus / Plus Query: 193 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 253 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 313 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 372 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 373 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 433 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 493 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 613 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 476
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 928 bits (468), Expect = 0.0 Identities = 474/476 (99%) Strand = Plus / Plus Query: 193 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 253 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 313 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 372 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 373 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 433 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 493 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 613 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 424 acggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 479
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 926 bits (467), Expect = 0.0 Identities = 493/500 (98%), Gaps = 2/500 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 19 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 76 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 77 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 136 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 196 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 256 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 316 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 317 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctct 376 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 436 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 496 Query: 482 ccccagtgggtagtgaaata 501 |||||||||||||||||||| Sbjct: 497 ccccagtgggtagtgaaata 516
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 924 bits (466), Expect = 0.0 Identities = 472/474 (99%) Strand = Plus / Plus Query: 195 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 255 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 315 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 374 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 375 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 435 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 495 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 555 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 614 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 615 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 421 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 474
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 924 bits (466), Expect = 0.0 Identities = 623/669 (93%), Gaps = 14/669 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 139692 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 139635 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139634 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc 139575 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139574 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 139516 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139515 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 139456 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-t 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 139455 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgc 139396 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 139395 gaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctct 139336 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139335 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 139276 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 139275 gctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaac 139216 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139215 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 139159 Query: 542 a--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 | | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139158 actactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 139099 Query: 600 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||||| |||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 139098 cttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaat 139044 Query: 660 tgtcactgc 668 ||||||||| Sbjct: 139043 tgtcactgc 139035 Score = 924 bits (466), Expect = 0.0 Identities = 623/669 (93%), Gaps = 14/669 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 109607 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 109664 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109665 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc 109724 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109725 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 109783 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109784 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 109843 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct: 109844 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgc 109903 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 109904 gaatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctct 109963 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109964 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 110023 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 110024 gctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaac 110083 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110084 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 110140 Query: 542 a--aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 | | | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110141 actactaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 110200 Query: 600 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||||| |||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110201 cttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaat 110255 Query: 660 tgtcactgc 668 ||||||||| Sbjct: 110256 tgtcactgc 110264
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 920 bits (464), Expect = 0.0 Identities = 601/641 (93%), Gaps = 13/641 (2%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 20 acgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatcc 79 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 80 ggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagag 138 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 198 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 258 Query: 269 aatacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaag 327 ||||||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||| Sbjct: 259 aatacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaag 317 Query: 328 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 387 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 318 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 377 Query: 388 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 437 Query: 448 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 507 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 438 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 497 Query: 508 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 567 ||||||| | |||||||||||||||||||| | || | |||||||||||||||||| Sbjct: 498 gaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgt 552 Query: 568 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 627 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 553 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgga 607 Query: 628 gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 608 gccgtagcgaaagcgagtcttcatagggcaattgtcactgc 648
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 904 bits (456), Expect = 0.0 Identities = 615/664 (92%), Gaps = 11/664 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 22 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 79 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| Sbjct: 80 ggggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc 139 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 -tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 198 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 199 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 258 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||| Sbjct: 259 ccgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttg 318 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 319 agtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctcta 378 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 438 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 498 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 499 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 555 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 556 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcct 615 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| || ||||||||||||||||||||||||||||||| | |||| ||||| Sbjct: 616 ggttaag-----gggacccaccggagccgtagcgaaagcgagtcttcctggggcaattgt 670 Query: 663 cact 666 |||| Sbjct: 671 cact 674
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 896 bits (452), Expect = 0.0 Identities = 597/641 (93%), Gaps = 12/641 (1%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 142834 acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatcc 142775 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 142774 ggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagag 142716 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142715 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 142656 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142655 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagt 142596 Query: 269 aatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaag 327 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | || Sbjct: 142595 catacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagag 142536 Query: 328 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 387 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142535 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 142476 Query: 388 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 447 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 142475 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 142416 Query: 448 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 507 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 142415 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 142356 Query: 508 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 567 ||||||| | ||||||||||||||||||| | || | |||||||||||||||||| Sbjct: 142355 gaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgt 142301 Query: 568 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 627 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 142300 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgga 142246 Query: 628 gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 142245 gccgtagcgaaagcgagtcttcatagggcaattgtcactgc 142205 Score = 896 bits (452), Expect = 0.0 Identities = 597/641 (93%), Gaps = 12/641 (1%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110494 acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatcc 110553 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 110554 ggagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagag 110612 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110613 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 110672 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 268 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110673 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagt 110732 Query: 269 aatacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaag 327 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | || Sbjct: 110733 catacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagag 110792 Query: 328 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 387 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 110793 tccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgga 110852 Query: 388 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 447 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110853 atcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatag 110912 Query: 448 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 507 ||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| | Sbjct: 110913 cgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacat 110972 Query: 508 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 567 ||||||| | ||||||||||||||||||| | || | |||||||||||||||||| Sbjct: 110973 gaaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgt 111027 Query: 568 tgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgga 627 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111028 tgaagaatgagccggcgactcataggcagtggcttggttaag-----ggaacccaccgga 111082 Query: 628 gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 111083 gccgtagcgaaagcgagtcttcatagggcaattgtcactgc 111123
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 892 bits (450), Expect = 0.0 Identities = 615/665 (92%), Gaps = 13/665 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 4253 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 4310 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 4311 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 4369 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4370 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 4429 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4430 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 4489 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4490 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcga 4549 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4550 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 4609 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4610 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4669 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4670 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 4729 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4730 ctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagct 4786 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4787 gggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 4844 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 663 |||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 4845 gttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtc 4899 Query: 664 actgc 668 ||||| Sbjct: 4900 actgc 4904
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 892 bits (450), Expect = 0.0 Identities = 622/669 (92%), Gaps = 17/669 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || | |||||||||||| Sbjct: 1788 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatc-acgaaatgcttc 1844 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1845 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 1904 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1905 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccag 1963 Query: 183 aggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1964 aggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 2023 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-gg 299 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2024 accgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagc 2083 Query: 300 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 359 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2084 ccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgct 2143 Query: 360 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2144 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 2203 Query: 420 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 479 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2204 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaaga 2263 Query: 480 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2264 acccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 2320 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 | || | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2321 agccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 2378 Query: 600 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||||| |||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2379 cttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaat 2433 Query: 660 tgtcactgc 668 ||||||||| Sbjct: 2434 tgtcactgc 2442
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 892 bits (450), Expect = 0.0 Identities = 615/665 (92%), Gaps = 13/665 (1%) Strand = Plus / Minus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 23672 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 23615 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 23614 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 23556 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23555 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 23496 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 23495 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 23436 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23435 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcga 23376 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23375 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 23316 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 23256 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23255 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 23196 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 23195 ctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagct 23139 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23138 gggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 23081 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 663 |||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 23080 gttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtc 23026 Query: 664 actgc 668 ||||| Sbjct: 23025 actgc 23021
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 892 bits (450), Expect = 0.0 Identities = 616/665 (92%), Gaps = 14/665 (2%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 4522 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 4579 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 4580 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 4638 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4639 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 4698 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4699 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 4758 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4759 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcga 4818 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4819 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 4878 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4879 cccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4938 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4939 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 4998 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 | | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | Sbjct: 4999 ctggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagct 5054 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5055 gggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 5112 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 663 |||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 5113 gttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtc 5167 Query: 664 actgc 668 ||||| Sbjct: 5168 actgc 5172
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 892 bits (450), Expect = 0.0 Identities = 616/665 (92%), Gaps = 14/665 (2%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 4522 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 4579 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 4580 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 4638 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4639 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 4698 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4699 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 4758 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4759 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcga 4818 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4819 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 4878 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4879 cccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4938 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4939 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 4998 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 | | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | Sbjct: 4999 ctggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagct 5054 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5055 gggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 5112 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 663 |||||| |||| ||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 5113 gttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcatagggctattgtc 5167 Query: 664 actgc 668 ||||| Sbjct: 5168 actgc 5172
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 890 bits (449), Expect = 0.0 Identities = 617/667 (92%), Gaps = 15/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| Sbjct: 517 cggtggatacctagg-cacccagag-acgaggaagggcgtattaatcgacgaaatgcttc 574 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 575 ggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc 634 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 693 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 753 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || | Sbjct: 754 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgg 813 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 814 agtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctg 873 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 874 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 933 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||| || ||||| |||||||||||||||||||||||| Sbjct: 934 ctaaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaac 993 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| | Sbjct: 994 ccccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggag 1050 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 | || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1051 acag---gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 1107 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1108 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 1162 Query: 662 tcactgc 668 ||||||| Sbjct: 1163 tcactgc 1169
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 882 bits (445), Expect = 0.0 Identities = 616/668 (92%), Gaps = 13/668 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||| Sbjct: 86283 cggtggatacctagg-cacccagag-acgaggaagggcgtggtaagcgacgaaatgcttc 86340 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| Sbjct: 86341 ggggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc 86400 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86401 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 86459 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86460 aggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaa 86519 Query: 243 ccgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggt 300 |||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| Sbjct: 86520 ccgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggt 86579 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 ||||| | ||||||||||||| | |||||||||||||||||||||| | ||||| |||| Sbjct: 86580 tgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctc 86639 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86640 taacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 86699 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86700 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 86759 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 86760 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 86816 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86817 aaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 86876 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||| ||||||||||||||||||||||| |||||||||| || |||| ||| Sbjct: 86877 ttggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaatt 86931 Query: 661 gtcactgc 668 |||||||| Sbjct: 86932 gtcactgc 86939
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 882 bits (445), Expect = 0.0 Identities = 616/668 (92%), Gaps = 13/668 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||| | ||||||||||||||||| Sbjct: 88369 cggtggatacctagg-cacccagag-acgaggaagggcgtggtaagcgacgaaatgcttc 88426 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 88427 ggggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc 88486 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88487 -tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 88545 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88546 aggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 88605 Query: 243 ccgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggt 300 ||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||| Sbjct: 88606 ccgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggt 88665 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 ||||| | ||||||||||||| | |||||||||||||||||||||| | ||||| |||| Sbjct: 88666 tgagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctc 88725 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88726 taacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 88785 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88786 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 88845 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 88846 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 88902 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 || ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 88903 aaattagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggc 88962 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||| ||||||||||||||||||||||| |||||||||| || |||| ||| Sbjct: 88963 ttggttaag-----ggaacccaccggagccgtagcgagagcgagtcttcatggggcaatt 89017 Query: 661 gtcactgc 668 |||||||| Sbjct: 89018 gtcactgc 89025
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 878 bits (443), Expect = 0.0 Identities = 619/668 (92%), Gaps = 19/668 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| || |||||||||||||| Sbjct: 121 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaatcgacgaaatgcttc 178 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 179 ggggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc 238 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agcca 181 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 239 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagcca 297 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 357 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggt 300 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 358 accgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcc 416 Query: 301 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 417 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 476 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 477 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaa 536 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 537 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 596 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 540 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 597 -ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggc 652 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 | | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 653 ca----gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 708 Query: 601 ttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 709 ttggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaatt 763 Query: 661 gtcactgc 668 |||||||| Sbjct: 764 gtcactgc 771
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 872 bits (440), Expect = 0.0 Identities = 613/666 (92%), Gaps = 14/666 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtattaatcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 87 ggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 326 agtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| || Sbjct: 506 cccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggaga 562 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || |||||| ||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 563 cag---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggctt 619 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 620 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgt 674 Query: 663 cactgc 668 |||||| Sbjct: 675 cactgc 680
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 860 bits (434), Expect = 0.0 Identities = 617/669 (92%), Gaps = 16/669 (2%) Strand = Plus / Minus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 131849 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 131792 Query: 64 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 122 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131791 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 131732 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131731 -tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 131673 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131672 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131613 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 131612 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 131553 Query: 303 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 131552 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctc 131493 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131492 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 131433 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 131432 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 131373 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg- 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 131372 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 131316 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 || | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131315 ggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 131257 Query: 600 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||||| |||| ||||||||||||||||||||||||||||| | ||||| || Sbjct: 131256 cttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaat 131202 Query: 660 tgtcactgc 668 ||||||||| Sbjct: 131201 tgtcactgc 131193 Score = 860 bits (434), Expect = 0.0 Identities = 617/669 (92%), Gaps = 16/669 (2%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 103545 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 103602 Query: 64 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 122 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103603 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 103662 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103663 -tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 103721 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103722 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 103781 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 103782 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 103841 Query: 303 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 103842 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctc 103901 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103902 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 103961 Query: 421 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 480 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 103962 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 104021 Query: 481 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg- 539 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 104022 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 104078 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 || | || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104079 ggctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 104137 Query: 600 cttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||||| |||| ||||||||||||||||||||||||||||| | ||||| || Sbjct: 104138 cttggttaag-----ggaaaccaccggagccgtagcgaaagcgagtcttcacagggcaat 104192 Query: 660 tgtcactgc 668 ||||||||| Sbjct: 104193 tgtcactgc 104201
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 842 bits (425), Expect = 0.0 Identities = 613/672 (91%), Gaps = 17/672 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 128425 cggtggatacctagg-cactcag-agacgaggaagggcgtagcaatcgacgaaatgcttc 128368 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 128367 ggggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactg- 128309 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128308 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 128249 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 128248 aggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaa 128189 Query: 243 ccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaag 296 ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 128188 ccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaag 128129 Query: 297 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 356 ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 128128 cggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcac 128069 Query: 357 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 416 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128068 gctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 128009 Query: 417 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 476 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 128008 gcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaa 127949 Query: 477 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 536 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 127948 agaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 127892 Query: 537 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 596 ||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 127891 aggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcag 127832 Query: 597 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 656 |||| |||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 127831 tggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggc 127777 Query: 657 gattgtcactgc 668 ||||||||||| Sbjct: 127776 aattgtcactgc 127765 Score = 842 bits (425), Expect = 0.0 Identities = 613/672 (91%), Gaps = 17/672 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||| ||| ||||||||||||||||||| |||||||||||||| Sbjct: 95022 cggtggatacctagg-cactcag-agacgaggaagggcgtagcaatcgacgaaatgcttc 95079 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 95080 ggggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactg- 95138 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95139 ctgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 95198 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||| ||||||||| ||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 95199 aggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaa 95258 Query: 243 ccgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaag 296 ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||| Sbjct: 95259 ccgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaag 95318 Query: 297 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 356 ||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | Sbjct: 95319 cggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcac 95378 Query: 357 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 416 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95379 gctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 95438 Query: 417 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 476 |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 95439 gcaaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaa 95498 Query: 477 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 536 |||||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||| Sbjct: 95499 agaacccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggg 95555 Query: 537 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 596 ||| ||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct: 95556 aggagaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggcag 95615 Query: 597 tggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 656 |||| |||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct: 95616 tggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggc 95670 Query: 657 gattgtcactgc 668 ||||||||||| Sbjct: 95671 aattgtcactgc 95682
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 841 bits (424), Expect = 0.0 Identities = 611/667 (91%), Gaps = 14/667 (2%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||| |||| || |||||||||||||| Sbjct: 52665 cggtggatacctagg-cacccagag-acgaggaaggatgtagtaatcgacgaaatgcttc 52608 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 52607 ggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc 52548 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 52547 -tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccag 52489 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52488 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 52429 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggtt 301 ||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | | || Sbjct: 52428 ccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagctt 52369 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||| Sbjct: 52368 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctct 52309 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52308 gacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 52249 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| Sbjct: 52248 gctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaac 52189 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 52188 ccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 52132 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 52131 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggct 52074 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||| |||||||||||||| || ||||||| |||| Sbjct: 52073 tggttaag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattg 52019 Query: 662 tcactgc 668 ||||||| Sbjct: 52018 tcactgc 52012 Score = 841 bits (424), Expect = 0.0 Identities = 611/667 (91%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||| |||| || |||||||||||||| Sbjct: 37163 cggtggatacctagg-cacccagag-acgaggaaggatgtagtaatcgacgaaatgcttc 37220 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 37221 ggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc 37280 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 37281 -tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccag 37339 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 37340 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 37399 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggtt 301 ||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | | || Sbjct: 37400 ccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagctt 37459 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||| Sbjct: 37460 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctct 37519 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37520 gacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 37579 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| Sbjct: 37580 gctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaac 37639 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 37640 ccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 37696 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 37697 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggct 37754 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||| |||||||||||||| || ||||||| |||| Sbjct: 37755 tggttaag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattg 37809 Query: 662 tcactgc 668 ||||||| Sbjct: 37810 tcactgc 37816
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 841 bits (424), Expect = 0.0 Identities = 611/667 (91%), Gaps = 14/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||| |||| || |||||||||||||| Sbjct: 4091 cggtggatacctagg-cacccagag-acgaggaaggatgtagtaatcgacgaaatgcttc 4148 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 4149 ggggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc 4208 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 4209 -tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccag 4267 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4268 aggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaa 4327 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggtt 301 ||| |||||||||||||||||||||||||| ||| || ||||||||||||||| | | || Sbjct: 4328 ccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagctt 4387 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||| |||||| |||||| Sbjct: 4388 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctct 4447 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4448 gacccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 4507 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| Sbjct: 4508 gctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaac 4567 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4568 ccccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 4624 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4625 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggct 4682 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||| |||||||||||||| || ||||||| |||| Sbjct: 4683 tggttaag-----ggaacccaccggagccatagcgaaagcgagtattcatagggcaattg 4737 Query: 662 tcactgc 668 ||||||| Sbjct: 4738 tcactgc 4744
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 837 bits (422), Expect = 0.0 Identities = 609/666 (91%), Gaps = 12/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 116188 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 116131 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 116130 ggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc 116071 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 116070 -tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccag 116012 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 116011 aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaa 115952 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||| Sbjct: 115951 ccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttg 115893 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| Sbjct: 115892 agtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctcta 115833 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 115832 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 115773 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115772 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 115713 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 115712 cccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaga 115656 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 115655 attgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 115596 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 |||||||||| | ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 115595 ggttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgt 115541 Query: 663 cactgc 668 |||||| Sbjct: 115540 cactgc 115535 Score = 837 bits (422), Expect = 0.0 Identities = 609/666 (91%), Gaps = 12/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 85932 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 85989 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 85990 ggggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc 86049 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 86050 -tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccag 86108 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| Sbjct: 86109 aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaa 86168 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| |||| Sbjct: 86169 ccgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttg 86227 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| Sbjct: 86228 agtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctcta 86287 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86288 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 86347 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86348 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 86407 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 86408 cccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggaga 86464 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 86465 attgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 86524 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 |||||||||| | ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 86525 ggttaagggagc-----ccaccggagccgtagcgaaagcgagtcttcttagggcaattgt 86579 Query: 663 cactgc 668 |||||| Sbjct: 86580 cactgc 86585
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 72 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 131 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 132 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 192 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 252 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 312 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 371 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 372 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 432 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 492 tagtga 497 |||||| Sbjct: 421 tagtga 426
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 825 bits (416), Expect = 0.0 Identities = 606/664 (91%), Gaps = 12/664 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 2123 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 2124 gggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc- 2182 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2183 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 2242 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 2243 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaac 2302 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||| Sbjct: 2303 cgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttga 2362 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctg 362 || | ||||||||||||| | |||||||||||||||||||| || | || ||||||| Sbjct: 2363 gtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctcta 2422 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2423 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 2482 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2483 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 2542 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 2543 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 2599 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 2600 atcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcct 2659 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 2660 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgt 2714 Query: 663 cact 666 |||| Sbjct: 2715 cact 2718
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 825 bits (416), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Minus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||||| Sbjct: 130513 ggtggatacctagg-cacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcg 130456 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 130455 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac- 130397 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130396 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 130337 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130336 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 130277 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 130276 cgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtgga 130217 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 130216 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 130157 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130156 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 130097 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 130096 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 130037 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130036 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 825 bits (416), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||||| Sbjct: 101943 ggtggatacctagg-cacccagag-acgaggaggggcgtagtaagcgacgaaatgcttcg 102000 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 102001 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac- 102059 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102060 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 102119 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102120 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 102179 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 102180 cgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtgga 102239 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 102240 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 102299 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102300 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 102359 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 102360 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 102419 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102420 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%), Gaps = 5/119 (4%) Strand = Plus / Minus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 129856 Score = 165 bits (83), Expect = 2e-37 Identities = 110/119 (92%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102600
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 825 bits (416), Expect = 0.0 Identities = 606/664 (91%), Gaps = 12/664 (1%) Strand = Plus / Minus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 118070 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 118069 gggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc- 118011 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118010 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 117951 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 117950 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaac 117891 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||| Sbjct: 117890 cgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttga 117831 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctg 362 || | ||||||||||||| | |||||||||||||||||||| || | || ||||||| Sbjct: 117830 gtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctcta 117771 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117770 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 117711 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 117710 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 117651 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 117650 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 117594 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 117593 atcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcct 117534 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 117533 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgt 117479 Query: 663 cact 666 |||| Sbjct: 117478 cact 117475 Score = 825 bits (416), Expect = 0.0 Identities = 606/664 (91%), Gaps = 12/664 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttcg 90032 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 90033 gggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc- 90091 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90092 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 90151 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 90152 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaac 90211 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||| Sbjct: 90212 cgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttga 90271 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctg 362 || | ||||||||||||| | |||||||||||||||||||| || | || ||||||| Sbjct: 90272 gtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctcta 90331 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 90332 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 90391 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 90392 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 90451 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 90452 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 90508 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 90509 atcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcct 90568 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 90569 ggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgt 90623 Query: 663 cact 666 |||| Sbjct: 90624 cact 90627
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 825 bits (416), Expect = 0.0 Identities = 615/667 (92%), Gaps = 25/667 (3%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 712 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 655 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| Sbjct: 654 ggggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg- 601 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||||| |||||||||||||| || |||| ||| |||||||||||||||| Sbjct: 600 ctgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccag 548 Query: 183 aggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 aggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 488 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 487 accgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtg 428 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||| Sbjct: 427 gagtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctct 368 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 308 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 307 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 248 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 247 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 191 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 | | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 cccg-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 132 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 131 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattg 77 Query: 662 tcactgc 668 ||||||| Sbjct: 76 tcactgc 70
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 823 bits (415), Expect = 0.0 Identities = 604/663 (91%), Gaps = 11/663 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctagg-cacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcg 80 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| Sbjct: 81 gggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc- 139 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 199 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 200 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaac 259 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 260 cgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttga 319 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 | | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| | Sbjct: 320 atcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaa 379 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 439 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 499 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 500 ccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaa 556 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || Sbjct: 557 tcgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctg 616 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtc 663 |||||| |||||||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 617 gttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattgtc 671 Query: 664 act 666 ||| Sbjct: 672 act 674
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 819 bits (413), Expect = 0.0 Identities = 509/537 (94%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 87 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 326 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 |||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 506 cccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 97.6 bits (49), Expect = 5e-17 Identities = 76/85 (89%), Gaps = 5/85 (5%) Strand = Plus / Plus Query: 584 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 643 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 644 gtcttaatagggcgattgtcactgc 668 ||||| ||||||| ||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgc 671
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 819 bits (413), Expect = 0.0 Identities = 509/537 (94%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 87 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 326 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 |||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 506 cccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 641 -----ggaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 815 bits (411), Expect = 0.0 Identities = 607/667 (91%), Gaps = 12/667 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 146538 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 146481 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | Sbjct: 146480 ggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac 146421 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 146420 -tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccag 146362 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 146361 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 146302 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| Sbjct: 146301 ccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttg 146242 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctct 361 ||| | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 146241 agtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctcc 146182 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 146181 aacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaag 146122 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 146121 gctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaac 146062 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| | Sbjct: 146061 ccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggag 146005 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 146004 aatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 145945 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 145944 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattg 145890 Query: 662 tcactgc 668 ||||||| Sbjct: 145889 tcactgc 145883 Score = 815 bits (411), Expect = 0.0 Identities = 607/667 (91%), Gaps = 12/667 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111924 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 111981 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | Sbjct: 111982 ggggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac 112041 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112042 -tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccag 112100 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112101 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 112160 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| ||||||| |||||||||||||||| |||| Sbjct: 112161 ccgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttg 112220 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctct 361 ||| | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 112221 agtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctcc 112280 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 112281 aacccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaag 112340 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 112341 gctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaac 112400 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| | Sbjct: 112401 ccccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggag 112457 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || |||| |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 112458 aatcggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcc 112517 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 112518 tggttaag-----ggaacccaccggagccgtagcgaaagcgagtcttcctagggcaattg 112572 Query: 662 tcactgc 668 ||||||| Sbjct: 112573 tcactgc 112579
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 815 bits (411), Expect = 0.0 Identities = 606/666 (90%), Gaps = 8/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 5 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 62 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 63 ggggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc 122 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||| || |||||||||||||||||||||||||||||||||||||||| | Sbjct: 123 -tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccgg 181 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 182 aggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaa 241 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||| |||| | | |||| |||| ||||||||||||| |||| Sbjct: 242 ccgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttg 301 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| Sbjct: 302 agtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctcta 361 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 acccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 421 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 481 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| || Sbjct: 482 cccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggaga 538 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 539 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 598 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||||||| | | ||||||||||| ||||||||||||||||| ||||| ||||| Sbjct: 599 ggttaagggaaag--aaccaccggagccatagcgaaagcgagtcttcccagggcaattgt 656 Query: 663 cactgc 668 |||||| Sbjct: 657 cactgc 662
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 813 bits (410), Expect = 0.0 Identities = 605/666 (90%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 3911 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 3968 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 3969 ggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc 4028 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| || || | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 4029 -tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccag 4087 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4088 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 4147 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 4148 ccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttg 4207 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 4208 agttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttta 4267 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4268 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 4327 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4328 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 4387 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| || Sbjct: 4388 cccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggaga 4444 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 4445 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 4504 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 4505 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgt 4559 Query: 663 cactgc 668 |||||| Sbjct: 4560 cactgc 4565
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 813 bits (410), Expect = 0.0 Identities = 605/666 (90%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 21 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 78 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 79 ggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc 138 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| || || | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 139 -tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccag 197 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 198 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 257 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 258 ccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttg 317 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 318 agttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttta 377 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 437 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggaga 554 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 615 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgt 669 Query: 663 cactgc 668 |||||| Sbjct: 670 cactgc 675
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 813 bits (410), Expect = 0.0 Identities = 605/666 (90%), Gaps = 11/666 (1%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 151224 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 151167 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 151166 ggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc 151107 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| || || | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 151106 -tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccag 151048 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 151047 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 150988 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 150987 ccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttg 150928 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 150927 agttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttta 150868 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150867 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 150808 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150807 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 150748 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| || Sbjct: 150747 cccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggaga 150691 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 150690 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 150631 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 150630 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgt 150576 Query: 663 cactgc 668 |||||| Sbjct: 150575 cactgc 150570 Score = 813 bits (410), Expect = 0.0 Identities = 605/666 (90%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 117442 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 117499 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 117500 ggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc 117559 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| || || | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 117560 -tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccag 117618 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 117619 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 117678 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 117679 ccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttg 117738 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 117739 agttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttta 117798 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117799 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 117858 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117859 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 117918 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| || Sbjct: 117919 cccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggaga 117975 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 117976 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 118035 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 118036 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgt 118090 Query: 663 cactgc 668 |||||| Sbjct: 118091 cactgc 118096
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 813 bits (410), Expect = 0.0 Identities = 605/666 (90%), Gaps = 11/666 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 21 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 78 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 79 ggggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc 138 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| || || | |||||||||||| |||||||||||||||||||||||||||| Sbjct: 139 -tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccag 197 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 198 aggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaa 257 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||| Sbjct: 258 ccgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttg 317 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| | |||||| |||||| | ||||||||||||||||||| |||| |||| || | Sbjct: 318 agttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacacttta 377 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 437 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| ||||| || | |||| |||||||||| |||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggaga 554 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| |||| |||||||||||||||||||||||||||| |||||| ||||| Sbjct: 615 ggttaag-----ggaattcaccggagccgtagcgaaagcgagtcttcctagggcaattgt 669 Query: 663 cactgc 668 |||||| Sbjct: 670 cactgc 675
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 811 bits (409), Expect = 0.0 Identities = 508/537 (94%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 87 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||| Sbjct: 326 agtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 |||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 506 cccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 115 bits (58), Expect = 2e-22 Identities = 105/119 (88%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 || ||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 811 bits (409), Expect = 0.0 Identities = 508/537 (94%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 87 ggggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||| Sbjct: 326 agtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 |||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 506 cccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 117 bits (59), Expect = 5e-23 Identities = 105/119 (88%), Gaps = 6/119 (5%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||| ||| ||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 693
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 811 bits (409), Expect = 0.0 Identities = 508/537 (94%), Gaps = 6/537 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 87 ggggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| |||||||||||||| | ||||||||||||||||||||| |||||||| |||||| Sbjct: 326 agtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaacc 505 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 506 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 127 bits (64), Expect = 5e-26 Identities = 108/120 (90%), Gaps = 7/120 (5%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 610 ggaacggaacccaccgg-agccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 -----ggaacccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 811 bits (409), Expect = 0.0 Identities = 608/670 (90%), Gaps = 15/670 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 22 cggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgcttc 79 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| Sbjct: 80 ggggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc 139 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| | Sbjct: 140 -tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccgg 198 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 199 aggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaa 258 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcg 298 ||||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| Sbjct: 259 ccgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagca 318 Query: 299 gttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgc 358 ||||||| | |||||| |||||| | ||||||||| |||||||||| || | ||||||| Sbjct: 319 gttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgc 378 Query: 359 tctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 418 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgc 438 Query: 419 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 aaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaag 498 Query: 479 aacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggag 538 |||||||| ||| ||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 499 aacccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggag 555 Query: 539 gggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtg 598 | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 556 gagaatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtg 615 Query: 599 gcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga 658 || |||||||| ||||||||||||||||||||||||||| |||||| | |||| | Sbjct: 616 gcctggttaag-----ggaacccaccggagccgtagcgaaagcaagtcttcctggggcaa 670 Query: 659 ttgtcactgc 668 |||||||||| Sbjct: 671 ttgtcactgc 680
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 809 bits (408), Expect = 0.0 Identities = 507/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||| || ||||||||||||||| Sbjct: 46274 ggtggatacctagg-cacccagag-acgaagaagggcgtattaatcgacgaaatgcttcg 46331 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 46332 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 46390 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46391 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 46450 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46451 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 46510 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 46511 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 46570 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 46571 gtaccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctga 46630 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46631 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 46690 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 46691 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 46750 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46751 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 180 bits (91), Expect = 4e-42 Identities = 112/119 (94%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 46878 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 46931
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 805 bits (406), Expect = 0.0 Identities = 451/467 (96%), Gaps = 13/467 (2%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 562 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 75067 Query: 622 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 75066 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 75020 Score = 365 bits (184), Expect = 1e-97 Identities = 205/210 (97%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 75692 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 75635 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 75634 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 75575 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75574 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 75515 Query: 182 gaggaaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||||||| Sbjct: 75514 gaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 805 bits (406), Expect = 0.0 Identities = 451/467 (96%), Gaps = 13/467 (2%) Strand = Plus / Plus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 562 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 382471 Query: 622 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 382472 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 382518 Score = 365 bits (184), Expect = 1e-97 Identities = 205/210 (97%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 381846 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 381903 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 381904 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 381963 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381964 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 382023 Query: 182 gaggaaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||||||| Sbjct: 382024 gaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 805 bits (406), Expect = 0.0 Identities = 451/467 (96%), Gaps = 13/467 (2%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 562 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 113158 Query: 622 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 113157 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 113111 Score = 365 bits (184), Expect = 1e-97 Identities = 205/210 (97%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 113783 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 113726 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 113725 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 113666 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113665 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 113606 Query: 182 gaggaaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||||||| Sbjct: 113605 gaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 805 bits (406), Expect = 0.0 Identities = 451/467 (96%), Gaps = 13/467 (2%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 562 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 367840 Query: 622 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 367839 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 367793 Score = 805 bits (406), Expect = 0.0 Identities = 451/467 (96%), Gaps = 13/467 (2%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 562 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccc 621 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccc 184445 Query: 622 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 184444 accggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 184398 Score = 365 bits (184), Expect = 1e-97 Identities = 205/210 (97%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 368465 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 368408 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 368407 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 368348 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368347 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 368288 Query: 182 gaggaaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||||||| Sbjct: 368287 gaggaaaagaaagcaaaagcgattcccgta 368258 Score = 365 bits (184), Expect = 1e-97 Identities = 205/210 (97%), Gaps = 2/210 (0%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 185070 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 185013 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 185012 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 184953 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184952 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 184893 Query: 182 gaggaaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||||||| Sbjct: 184892 gaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 3e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 795 bits (401), Expect = 0.0 Identities = 536/575 (93%), Gaps = 9/575 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 71 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 128 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 129 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 187 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 188 tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgga 247 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 307 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 308 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaa 367 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 368 gtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga 427 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 487 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 488 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 547 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gga 542 || ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | Sbjct: 548 ccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcc 604 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatga 577 || | |||||||||||||||||||||||||||| Sbjct: 605 caggg--ctctgaccgcgtgcctgttgaagaatga 637
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 763 bits (385), Expect = 0.0 Identities = 488/518 (94%), Gaps = 7/518 (1%) Strand = Plus / Minus Query: 88 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 147 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 148 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 208 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 268 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 326 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 387 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 446 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 447 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 506 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 507 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 566 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 567 ttgaagaatgagccggcgactcataggcagtggcttgg 604 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggcagtggcttgg 1
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 602 tggtta 607 |||||| Sbjct: 492 tggtta 497
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 743 bits (375), Expect = 0.0 Identities = 505/543 (93%), Gaps = 7/543 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| ||||||||||||||| || |||||||||||||| Sbjct: 29 cggtggatacctagg-cacccagag-acgaggaagggcgtattaatcgacgaaatgcttc 86 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 87 ggggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc 146 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 205 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 206 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 265 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || | Sbjct: 266 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgg 325 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 326 agtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctg 385 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 386 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 445 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 446 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-c 504 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| || Sbjct: 505 cccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggaga 561 Query: 543 aag 545 ||| Sbjct: 562 aag 564 Score = 91.7 bits (46), Expect = 3e-15 Identities = 52/54 (96%) Strand = Plus / Plus Query: 615 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 655
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 726 bits (366), Expect = 0.0 Identities = 437/457 (95%), Gaps = 4/457 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 42 acgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatcc 101 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||| Sbjct: 102 ggagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagag 160 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 220 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 280 Query: 269 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 328 ||||||||||| |||||||||||||||||||| || | | |||||||||||||| | ||| Sbjct: 281 aatacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagt 340 Query: 329 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 388 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 341 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 400 Query: 389 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 448 ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 401 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagt 458 Query: 449 gaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||| |||| ||||||||||| Sbjct: 459 gaagtagtaccgtgagggaagggtg-aaagaaccccc 494 Score = 85.7 bits (43), Expect = 2e-13 Identities = 72/80 (90%), Gaps = 5/80 (6%) Strand = Plus / Plus Query: 590 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 648 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 649 aatagggcgattgtcactgc 668 ||||||| ||||||||||| Sbjct: 669 catagggcaattgtcactgc 688
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 722 bits (364), Expect = 0.0 Identities = 597/667 (89%), Gaps = 15/667 (2%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| ||||||||||| |||| || |||||||||||||| Sbjct: 21 cggtggatacctagg-cacccagag-acgaggaagggtgtagtaatcgacgaaatgcttc 78 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| Sbjct: 79 ggggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc 138 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 139 -tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccag 197 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 198 aggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaa 257 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggtt 301 ||| |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || Sbjct: 258 ccgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagctt 317 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 | || |||||||||||||| |||||||||||| | |||||||||||| || ||||| Sbjct: 318 aaatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctct 377 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 378 gacccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaag 437 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| Sbjct: 438 gctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa- 496 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 497 ccccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggag 553 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 554 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggct 611 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 |||||||| |||||||||||||||| |||||||||||||| || ||||| | |||| Sbjct: 612 tggttaag-----ggaacccaccggagccatagcgaaagcgagtattcataggactattg 666 Query: 662 tcactgc 668 ||||||| Sbjct: 667 tcactgc 673
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 722 bits (364), Expect = 0.0 Identities = 446/470 (94%), Gaps = 3/470 (0%) Strand = Plus / Plus Query: 6 tggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| Sbjct: 1 tggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcggg 58 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 59 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 117 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118 ccgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 177 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 237 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 238 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaac 297 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 298 accgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacc 357 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 417 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 475 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 418 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 81 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 140 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 141 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 201 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 261 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 321 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 380 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 381 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 441 ccgata 446 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 31 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 90 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 91 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 150 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 151 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 211 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 271 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 331 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 390 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 535 bits (270), Expect = e-149 Identities = 285/289 (98%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 382 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 562 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 619 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 122581 Query: 620 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 122580 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 122532
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 31 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 90 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 91 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 150 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 151 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 211 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 271 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 331 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 390 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 535 bits (270), Expect = e-149 Identities = 285/289 (98%), Gaps = 2/289 (0%) Strand = Plus / Minus Query: 382 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 562 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacggaac 619 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaac 12825122 Query: 620 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12825121 ccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 12825073 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 674 bits (340), Expect = 0.0 Identities = 346/348 (99%) Strand = Plus / Plus Query: 321 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 380 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 381 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 441 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 501 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 561 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacc 300 Query: 621 caccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 301 caccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 348
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 575 bits (290), Expect = e-161 Identities = 296/298 (99%) Strand = Plus / Plus Query: 371 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 431 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 491 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 550 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 611 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 241 gaacggaacccaccggagccgtagcgaaagcgagtcttcatagggcgattgtcactgc 298
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 108 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 167 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 168 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 228 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 288 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 347 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 348 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 407 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 408 gaccaccttgcaaggctaaatactcctgggtg 439 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 551 bits (278), Expect = e-153 Identities = 281/282 (99%) Strand = Plus / Plus Query: 387 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 447 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 507 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 567 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg 240 Query: 627 agccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 241 agccgtagcgaaagcgagtcttcatagggcgattgtcactgc 282
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 547 bits (276), Expect = e-152 Identities = 571/664 (85%), Gaps = 7/664 (1%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| |||| ||||||||| |||| ||||||||||||| Sbjct: 143939 gcggtggatacctagg-cacccagag-acgaagaagggcgtggcaaacgacgaaatgctt 143996 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 ||||||| ||||||| | |||||||||||||||||| ||||||| |||||| |||||| Sbjct: 143997 cggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactg 144056 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 144057 cctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccg 144116 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| ||||||| Sbjct: 144117 gaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaa 144176 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||| ||||||||||||||||| || || | || | ||||||||||| ||| Sbjct: 144177 accgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagtt 144236 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| Sbjct: 144237 gagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctcc 144296 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||| Sbjct: 144297 aacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaag 144356 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 144357 gctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaac 144416 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| | Sbjct: 144417 ccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggag 144473 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 144474 aatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcc 144533 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||| |||||| |||||||||||||||||||||||||| | |||| |||| Sbjct: 144534 cggttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattg 144591 Query: 662 tcac 665 |||| Sbjct: 144592 tcac 144595 Score = 547 bits (276), Expect = e-152 Identities = 571/664 (85%), Gaps = 7/664 (1%) Strand = Plus / Minus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| |||| ||||||||| |||| ||||||||||||| Sbjct: 88912 gcggtggatacctagg-cacccagag-acgaagaagggcgtggcaaacgacgaaatgctt 88855 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 ||||||| ||||||| | |||||||||||||||||| ||||||| |||||| |||||| Sbjct: 88854 cggggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactg 88795 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 88794 cctgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccg 88735 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 ||||| | |||||||||||||||||| ||||| ||||||| |||| |||| ||||||| Sbjct: 88734 gaggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaa 88675 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt 301 |||||||| ||||||||||||||||| || || | || | ||||||||||| ||| Sbjct: 88674 accgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagtt 88615 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| Sbjct: 88614 gagtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctcc 88555 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||| Sbjct: 88554 aacccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaag 88495 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 88494 gctaaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaac 88435 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 |||| ||| ||||||||||||| |||||||| ||||||||||||||||||||| | Sbjct: 88434 ccccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggag 88378 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || | ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 88377 aatgagatctctaaccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcc 88318 Query: 602 tggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattg 661 ||||||||| |||||| |||||||||||||||||||||||||| | |||| |||| Sbjct: 88317 cggttaaggg-ggagaaccc-ccggagccgtagcgaaagcgagtcttgctggggcaattg 88260 Query: 662 tcac 665 |||| Sbjct: 88259 tcac 88256
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 525 bits (265), Expect = e-146 Identities = 376/406 (92%), Gaps = 7/406 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 2621 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 2678 Query: 64 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 122 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2679 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 2738 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2739 -tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccag 2797 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2798 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 2857 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 2858 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 2917 Query: 303 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 || ||| |||||||||||||| | |||||||||||||||||||||||| ||||| |||| Sbjct: 2918 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctc 2976 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 406 ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2977 tgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 525 bits (265), Expect = e-146 Identities = 376/406 (92%), Gaps = 7/406 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 876 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 933 Query: 64 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 122 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 934 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 993 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 994 -tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccag 1052 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 1112 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 302 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 1113 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 1172 Query: 303 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 360 || ||| |||||||||||||| | |||||||||||||||||||||||| ||||| |||| Sbjct: 1173 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctc 1231 Query: 361 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 406 ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1232 tgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 494 bits (249), Expect = e-136 Identities = 272/278 (97%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 18 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 75 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 135 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 195 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 255 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgt 279 |||||||||||||||||||||||||||||||||||||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 494 bits (249), Expect = e-136 Identities = 272/278 (97%), Gaps = 2/278 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 18 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 75 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 135 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 195 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 255 Query: 242 accgtgaaaacggggttgtgggagagcaatacaagcgt 279 |||||||||||||||||||||||||||||||||||||| Sbjct: 256 accgtgaaaacggggttgtgggagagcaatacaagcgt 293
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 490 bits (247), Expect = e-135 Identities = 378/421 (89%), Gaps = 8/421 (1%) Strand = Plus / Minus Query: 248 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 307 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 308 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 367 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 488 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 547 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 548 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 607 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 608 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 || || |||||||||||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5927 ag-----ggcacccaccggagccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 668 c 668 | Sbjct: 5872 c 5872 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 47 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 106 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 107 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 166 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 167 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 226 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 227 atgggagcagcctaaaccgt 246 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 486 bits (245), Expect = e-134 Identities = 556/654 (85%), Gaps = 25/654 (3%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| |||||| |||||||||||||||||| ||||| |||||||| Sbjct: 139248 cggtggatacctagg-caccca-aagacgaggaagggcgtagcaggcgac--aatgcttc 139193 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||| || | |||||||||||||||||||| ||| ||| ||| |||| || |||||| Sbjct: 139192 gggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgc 139133 Query: 123 ctgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtag 178 | ||||||||| | || |||||||| ||| ||||||| |||||||| | ||| Sbjct: 139132 c----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatag 139077 Query: 179 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 238 || | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 139076 ccgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcc 139017 Query: 239 taaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcga 294 ||||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| || Sbjct: 139016 taaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtga 138958 Query: 295 agcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctt 354 |||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| |||| Sbjct: 138957 agcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggctt 138898 Query: 355 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 414 | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 138897 acgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacc 138838 Query: 415 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 474 | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 138837 tcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtga 138778 Query: 475 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 534 |||||||||||| ||| ||||||||||||| |||||||| | ||||||| ||||||| Sbjct: 138777 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtg 138721 Query: 535 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 594 ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138720 ggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggc 138661 Query: 595 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 648 | ||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138660 ggcggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 138612 Score = 486 bits (245), Expect = e-134 Identities = 556/654 (85%), Gaps = 25/654 (3%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| |||||| |||||||||||||||||| ||||| |||||||| Sbjct: 82629 cggtggatacctagg-caccca-aagacgaggaagggcgtagcaggcgac--aatgcttc 82684 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||| || | |||||||||||||||||||| ||| ||| ||| |||| || |||||| Sbjct: 82685 gggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgc 82744 Query: 123 ctgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtag 178 | ||||||||| | || |||||||| ||| ||||||| |||||||| | ||| Sbjct: 82745 c----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatag 82800 Query: 179 ccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcc 238 || | |||| |||| |||||||||||||||| |||||||||||||||| ||||| |||| Sbjct: 82801 ccgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcc 82860 Query: 239 taaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcga 294 ||||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| || Sbjct: 82861 taaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtga 82919 Query: 295 agcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctt 354 |||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| |||| Sbjct: 82920 agcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggctt 82979 Query: 355 atgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacc 414 | ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 82980 acgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacc 83039 Query: 415 ttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtga 474 | | ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 83040 tcgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtga 83099 Query: 475 aaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtg 534 |||||||||||| ||| ||||||||||||| |||||||| | ||||||| ||||||| Sbjct: 83100 aaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtg 83156 Query: 535 ggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 594 ||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 83157 ggaggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggc 83216 Query: 595 agtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtctt 648 | ||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 83217 ggcggcctggttaag-----ggaacccaccggagccgtagcgaaagcgagtctt 83265
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 462 bits (233), Expect = e-127 Identities = 334/363 (92%), Gaps = 4/363 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| | |||||||||||||| || ||||||||||||||| Sbjct: 177053 ggtggatacctagg-cacccagag-aggaggaagggcgtagtaatcgacgaaatgcttcg 177110 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 177111 gggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc- 177169 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 ||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||| Sbjct: 177170 tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccaga 177229 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 177230 ggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaac 177289 Query: 244 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 302 |||||||||||||||||||||||||||||||||||| |||| |||||||||||| | | Sbjct: 177290 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccg 177349 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 177350 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctg 177409 Query: 363 acc 365 ||| Sbjct: 177410 acc 177412 Score = 180 bits (91), Expect = 4e-42 Identities = 112/119 (94%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177465 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 177518 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagc 179 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagc 179 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 324 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 383 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 384 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 444 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 503 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 504 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 563 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 564 ctgttgaagaatgagccggcgactcataggcagtggcttg 603 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 103 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 162 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 223 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 282 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 283 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 342 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 343 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 402 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 403 gcaaggaccaccttgcaag 421 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 125 bits (63), Expect = 2e-25 Identities = 105/119 (88%), Gaps = 5/119 (4%) Strand = Plus / Minus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||| ||||||||||||||| ||| |||| ||| ||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgc 3136 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 430 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 489 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 490 ggtagtgaaatagaacgtgaaacc 513 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 67.9 bits (34), Expect = 4e-08 Identities = 79/92 (85%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 1 ggcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgct 60 ||||||||||||||| | ||||||| |||||||||||| ||| |||||||||||||| Sbjct: 3783 ggcggtggatacctatg-cacccagag-acgaggaagggcatagttagcgacgaaatgct 3726 Query: 61 tcggggagttgaaaataagcatagatccggag 92 || | |||||| |||||||| |||||| |||| Sbjct: 3725 tcagagagttgcaaataagcgtagatcaggag 3694
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 200 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 259 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 260 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 318 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 319 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 378 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 379 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 438 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 439 gaccgata 446 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 383 bits (193), Expect = e-103 Identities = 245/259 (94%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||| Sbjct: 79748 ggtggatacctagg-cacccagag-acgaggaagggcgtagtaagcgacgaaatgcttcg 79691 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 79690 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 79632 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79631 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 79572 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 79571 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 79512 Query: 244 cgtgaaaacggggttgtgg 262 ||||||||||||||||||| Sbjct: 79511 cgtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 377 bits (190), Expect = e-101 Identities = 211/216 (97%), Gaps = 2/216 (0%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 75786 gcggtggatacctagg-cacccagag-acgaggaagggcgtagcaagcgacgaaatgctt 75843 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75844 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 75903 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 181 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75904 cctgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 75963 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcg 217 |||||||||||||||||||||||||||||||||||| Sbjct: 75964 gaggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 9.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ggcgaactgaaacatcttag 175 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 369 bits (186), Expect = 8e-99 Identities = 509/605 (84%), Gaps = 20/605 (3%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 232 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 291 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 292 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 351 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 352 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 410 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 411 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 470 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 471 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 530 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 531 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 590 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594 Query: 591 aggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaa 650 | | |||||| ||||||||| |||| ||||||||||| |||||||||| |||||| | Sbjct: 595 aagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaaagcaagtcttca 649 Query: 651 taggg 655 ||||| Sbjct: 650 taggg 654
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 489 gggtagtgaaatagaacgtgaaaccgt 515 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 339 bits (171), Expect = 7e-90 Identities = 274/306 (89%), Gaps = 8/306 (2%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 615 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 669 Query: 663 cactgc 668 |||||| Sbjct: 670 cactgc 675 Score = 266 bits (134), Expect = 9e-68 Identities = 197/218 (90%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||||||||||||||||||||||||||| ||| || |||||| ||||| Sbjct: 33 acgaagaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatcc 92 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||| ||| |||||| ||||| || |||||||||||||| || | ||||||||| Sbjct: 93 ggagatgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagag 152 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 246 ||||| |||||||||||||||| ||||||||||||| Sbjct: 213 tgagtagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 339 bits (171), Expect = 7e-90 Identities = 274/306 (89%), Gaps = 8/306 (2%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 603 ggttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 |||||||| | ||| |||||||||||||||||||||||||| |||||||| ||| Sbjct: 628 ggttaaggcga--gaa---gccggagccgtagcgaaagcgagtctttctagggcgaatgt 682 Query: 663 cactgc 668 |||||| Sbjct: 683 cactgc 688 Score = 272 bits (137), Expect = 1e-69 Identities = 218/243 (89%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctagg-cacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcg 80 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 ||||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||| Sbjct: 81 gggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcc 140 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 200 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaac 260 Query: 244 cgt 246 ||| Sbjct: 261 cgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 333 bits (168), Expect = 4e-88 Identities = 274/306 (89%), Gaps = 10/306 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 604 gttaagggaacg-gaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgt 662 ||||||| || ||| || |||||||||||||||||||||||| |||||||| ||| Sbjct: 733 gttaagg---cgtgaagcc---ggagccgtagcgaaagcgagtctttctagggcgaatgt 786 Query: 663 cactgc 668 |||||| Sbjct: 787 cactgc 792 Score = 262 bits (132), Expect = 1e-66 Identities = 216/242 (89%), Gaps = 2/242 (0%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctagg-cacccagag-acgaagaagggcgtagcaagcgacgaaatgcttcg 184 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 123 || || ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||| Sbjct: 185 ggaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcc 244 Query: 124 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 183 |||||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 tgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 304 Query: 184 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 305 ggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaac 364 Query: 244 cg 245 || Sbjct: 365 cg 366
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 333 bits (168), Expect = 4e-88 Identities = 174/176 (98%) Strand = Plus / Minus Query: 458 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 517 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 518 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 577 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 578 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgta 107875
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 329 bits (166), Expect = 7e-87 Identities = 331/384 (86%), Gaps = 9/384 (2%) Strand = Plus / Plus Query: 285 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 344 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 345 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 404 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 405 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 464 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 524 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 525 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 584 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 585 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 644 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 599 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 653 Query: 645 tcttaatagggcgattgtcactgc 668 || ||| ||||||||||||||||| Sbjct: 654 tc-taacagggcgattgtcactgc 676 Score = 262 bits (132), Expect = 1e-66 Identities = 234/266 (87%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 22 cggtggatacctagg-cacccagag-acgaagaagggcgtggtaagcgacgaaatgcttc 79 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 80 ggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactac 139 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 140 ttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccag 199 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 200 aggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaa 259 Query: 243 ccgtgaaaacggggttgtgggagagc 268 ||| |||| ||||||||||||||||| Sbjct: 260 ccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 329 bits (166), Expect = 7e-87 Identities = 331/384 (86%), Gaps = 9/384 (2%) Strand = Plus / Minus Query: 285 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 344 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 345 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 404 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 405 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 464 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 524 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 525 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 584 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 585 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 644 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 124612 Query: 645 tcttaatagggcgattgtcactgc 668 || ||| ||||||||||||||||| Sbjct: 124611 tc-taacagggcgattgtcactgc 124589 Score = 329 bits (166), Expect = 7e-87 Identities = 331/384 (86%), Gaps = 9/384 (2%) Strand = Plus / Plus Query: 285 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 344 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 345 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 404 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 405 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 464 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 524 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 525 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 584 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 585 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 644 ||| |||||||||||| |||||||| |||| |||||||||||||||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaag-----ggaattcaccggagccgtagcgaaagcgag 95254 Query: 645 tcttaatagggcgattgtcactgc 668 || ||| ||||||||||||||||| Sbjct: 95255 tc-taacagggcgattgtcactgc 95277 Score = 262 bits (132), Expect = 1e-66 Identities = 234/266 (87%), Gaps = 2/266 (0%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 125243 cggtggatacctagg-cacccagag-acgaagaagggcgtggtaagcgacgaaatgcttc 125186 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 125185 ggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactac 125126 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 125125 ttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccag 125066 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 125065 aggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaa 125006 Query: 243 ccgtgaaaacggggttgtgggagagc 268 ||| |||| ||||||||||||||||| Sbjct: 125005 ccgcgaaagcggggttgtgggagagc 124980 Score = 262 bits (132), Expect = 1e-66 Identities = 234/266 (87%), Gaps = 2/266 (0%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||| ||||||||| | ||||||||||||||||| Sbjct: 94623 cggtggatacctagg-cacccagag-acgaagaagggcgtggtaagcgacgaaatgcttc 94680 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 94681 ggggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactac 94740 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||| ||| | |||||| |||||||||||||||||||||||||||||||| Sbjct: 94741 ttgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccag 94800 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct: 94801 aggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaa 94860 Query: 243 ccgtgaaaacggggttgtgggagagc 268 ||| |||| ||||||||||||||||| Sbjct: 94861 ccgcgaaagcggggttgtgggagagc 94886
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 317 bits (160), Expect = 3e-83 Identities = 281/318 (88%), Gaps = 10/318 (3%) Strand = Plus / Plus Query: 339 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 398 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 399 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 458 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 459 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 518 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 519 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 578 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 579 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 638 ||||||||||||| | |||||| ||||||||| |||| ||||||||||| ||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaa 662 Query: 639 agcgagtcttaatagggc 656 ||| |||||| ||||||| Sbjct: 663 agcaagtcttcatagggc 680 Score = 133 bits (67), Expect = 8e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 197 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 198 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 257 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 258 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 317 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 318 a 318 | Sbjct: 325 a 325
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 615 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 666 Score = 167 bits (84), Expect = 6e-38 Identities = 183/216 (84%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| |||||||||| || |||||||| ||| |||| || ||| || |||||| ||||| Sbjct: 33 acgacgaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatcc 92 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||| ||| |||||| |||||| || |||| | ||||||| || || | |||| Sbjct: 93 ggagatccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagag 152 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 153 acaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 212 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||| |||| ||| ||||||| Sbjct: 213 ttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 115047 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 114996 Score = 309 bits (156), Expect = 6e-81 Identities = 263/296 (88%), Gaps = 7/296 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgat 659 ||||| || || || ||||||||| |||||||||||||||||||||||||||| Sbjct: 86941 gttaa-ggtacaaaa---accggagccatagcgaaagcgagtcttaatagggcgat 86992 Score = 167 bits (84), Expect = 6e-38 Identities = 204/242 (84%), Gaps = 2/242 (0%) Strand = Plus / Minus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| || |||| |||| |||||||||| || |||||||| ||| | Sbjct: 115654 cggtggatacctagg-catccag-agacgacgaagggcgtactaatcgacgaaacgctcc 115597 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||| || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| Sbjct: 115596 gggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactct 115537 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 | ||||||| || || | ||||||||||||| ||| |||||||||||||||||||| Sbjct: 115536 ccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccag 115477 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||| Sbjct: 115476 aggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaa 115417 Query: 243 cc 244 || Sbjct: 115416 cc 115415 Score = 167 bits (84), Expect = 6e-38 Identities = 204/242 (84%), Gaps = 2/242 (0%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| || |||| |||| |||||||||| || |||||||| ||| | Sbjct: 86334 cggtggatacctagg-catccag-agacgacgaagggcgtactaatcgacgaaacgctcc 86391 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 ||| || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| Sbjct: 86392 gggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactct 86451 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 | ||||||| || || | ||||||||||||| ||| |||||||||||||||||||| Sbjct: 86452 ccgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccag 86511 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||| Sbjct: 86512 aggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaa 86571 Query: 243 cc 244 || Sbjct: 86572 cc 86573
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 295 bits (149), Expect = 1e-76 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 608 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 609 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 4667 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 4724 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 4079 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 4138 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 4139 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 4197 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 4198 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 4257 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||||||||||||||||||||| |||||||| Sbjct: 4258 tgagtagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 295 bits (149), Expect = 1e-76 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 608 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 609 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Score = 210 bits (106), Expect = 4e-51 Identities = 188/214 (87%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| ||| || |||| || |||||| ||||||| ||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagag 164 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 295 bits (149), Expect = 1e-76 Identities = 308/359 (85%), Gaps = 4/359 (1%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 608 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 609 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 ||||| | ||||||||||| |||||||||| |||||| |||||| |||||||||| Sbjct: 634 gggaa-attatccaccggagccatagcgaaagcaagtctttttagggctattgtcactg 691 Score = 218 bits (110), Expect = 2e-53 Identities = 189/214 (88%), Gaps = 1/214 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| |||||||||||||||||||||||| ||||| | |||||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatcc 105 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| ||| || |||| || |||||| ||||||||||| || | ||||| Sbjct: 106 ggagattcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagag 164 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 agaacctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccc 224 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||||||||||||||||||||| |||||||| Sbjct: 225 tgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 518 tgagctcccaagcagtgggaggggaaagtgatc 550 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Plus Query: 573 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 632 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9056578 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9056637 Query: 633 agcgaaagcgagtcttaatagg 654 ||||||||||| |||||||||| Sbjct: 9056638 agcgaaagcgactcttaatagg 9056659
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 6e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 518 tgagctcccaagcagtgggaggggaaagtgatc 550 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272 Score = 44.1 bits (22), Expect = 0.58 Identities = 67/82 (81%) Strand = Plus / Plus Query: 573 aatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgt 632 ||||||||| |||||||| ||| ||| ||||||||| || || |||| |||| || Sbjct: 9128275 aatgagccgatgactcataagcaatggtttggttaagagagcgtaacctgtcggaattgt 9128334 Query: 633 agcgaaagcgagtcttaatagg 654 ||||||||||| |||||||||| Sbjct: 9128335 agcgaaagcgactcttaatagg 9128356
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 603 ggttaag 609 ||||||| Sbjct: 574 ggttaag 580 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 34 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 92 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 93 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 152 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 153 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 213 tagcggcgagcgaaatgggagcagcctaaacc 244 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 276 bits (139), Expect = 9e-71 Identities = 257/293 (87%), Gaps = 10/293 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 604 gttaagggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 656 ||||||| | | | |||||||| |||||||||||||||| |||||||| Sbjct: 605 gttaaggaa----attcatccggagccatagcgaaagcgagtctgaatagggc 653 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 204 ttcccgtagtagcggcgagcgaa 226 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 604 gttaagg 610 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 7e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 538 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 579 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Plus Query: 456 taccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 274 bits (138), Expect = 3e-70 Identities = 161/167 (96%), Gaps = 2/167 (1%) Strand = Plus / Plus Query: 2 gcggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgctt 61 |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct: 1565 gcggtggatacctaggt-acccagag-acgaggaagggcgtagcaagcgacgaaatgctt 1622 Query: 62 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1623 cggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactg 1682 Query: 122 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 168 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1683 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 358 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 417 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 418 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 477 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 478 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 537 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 538 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 597 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 598 ggcttggttaagg 610 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 151 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 210 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 211 agtagcggcgagcgaaatgggagcagcctaaacc 244 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcgg 64 |||| ||||||||||| ||||||||||| ||||||| Sbjct: 7 acgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 252 bits (127), Expect = 1e-63 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 357 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 416 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 417 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 476 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 477 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 536 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 537 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 596 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 597 tggcttggttaagggaa 613 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 188 bits (95), Expect = 2e-44 Identities = 187/215 (86%), Gaps = 2/215 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| ||||||||||| |||||||||||| ||||| | | ||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatcc 105 Query: 89 ggagattcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaaga 147 |||||||||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||| Sbjct: 106 ggagattcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataaga 164 Query: 148 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 207 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 165 gacaacctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttc 224 Query: 208 cgtagtagcggcgagcgaaatgggagcagcctaaa 242 | ||||||||||||||||||||||| |||||||| Sbjct: 225 ctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 603 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 604 gttaagg 610 ||||||| Sbjct: 611 gttaagg 617 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 49 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 108 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 109 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 168 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 169 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 228 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 229 gggagcagcctaaaccg 245 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 622 accggagccgtagcgaaagcgagtcttaatagggcgattgtcact 666 ||||||||| ||||||||||||||| ||||||||| ||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcact 668
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 5e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 292 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 351 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 352 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 411 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 412 accttgcaaggctaaatactcctgggtgaccga 444 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| || |||||||| ||||||||||| || ||| |||| | ||||| Sbjct: 33 acgatgaagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatcc 92 Query: 89 ggagattcccaaataggtcaacct 112 | |||||||| |||||| |||||| Sbjct: 93 gtagattcccgaatagggcaacct 116 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 625 ggagccgtagcgaaagcgagtcttaatagggcg 657 |||||| |||||||||||||||| ||||||||| Sbjct: 650 ggagccatagcgaaagcgagtctgaatagggcg 682
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 5e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 79.8 bits (40), Expect = 1e-11 Identities = 94/110 (85%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||| ||||||||||| || |||||||| ||||| Sbjct: 1775 cggtggatacctagg-cacccagag-acgatgaagggcgtagtaaccgacgaaacgcttc 1832 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 |||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1833 ggggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 625 ggagccgtagcgaaagcgagtcttaatagggcg 657 |||||| |||||||||||||||| ||||||||| Sbjct: 2419 ggagccatagcgaaagcgagtctgaatagggcg 2451
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 482 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 603 ggttaaggg 611 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 8e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 150 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 209 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 210 tagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 236 bits (119), Expect = 8e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 603 ggttaaggg 611 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 172 bits (87), Expect = 1e-39 Identities = 187/218 (85%), Gaps = 3/218 (1%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| ||||||||||||||||||| | || || ||| || | || Sbjct: 449 acgatgaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaaccc 506 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||| Sbjct: 507 ggagattcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagag 565 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 566 acaacctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattccc 625 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgt 246 |||||| ||||||||||| |||| ||||||||||||| Sbjct: 626 ttagtagtggcgagcgaaacgggaacagcctaaaccgt 663
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 236 bits (119), Expect = 8e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 87 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 89837 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 89778 Query: 88 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 147 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 89777 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 89719 Query: 148 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 198 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89718 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 236 bits (119), Expect = 8e-59 Identities = 160/171 (93%), Gaps = 2/171 (1%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatc 87 ||||||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 433 acgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatc 492 Query: 88 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 147 |||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 493 cggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaaga 551 Query: 148 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 198 ||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 552 gacaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 234 bits (118), Expect = 3e-58 Identities = 256/300 (85%), Gaps = 9/300 (3%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 488 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 547 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 548 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 607 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 608 agggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 || |||| |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 622 ag-----ggaatccaccgaagccatagcgaaagcaagtctt-tcagggcgattgtcactg 675 Score = 190 bits (96), Expect = 4e-45 Identities = 201/236 (85%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| |||||||||||||||||||||| || || ||||||| |||| Sbjct: 46 acgaagaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatcc 105 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 106 gaagattcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagag 165 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccc 225 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 264 ||||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 226 tcagtagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 311 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 370 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 371 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 430 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 431 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 490 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 491 gtagtgaaatagaacgtgaaa 511 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 1e-39 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 113 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 172 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 173 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 232 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 233 gcagcctaaaccgtgaaaacggggttg 259 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 99.6 bits (50), Expect = 1e-17 Identities = 94/107 (87%), Gaps = 5/107 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggc 656 | |||| ||||||||| | |||||||||| |||||| ||||||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggc 667
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 226 bits (114), Expect = 7e-56 Identities = 189/212 (89%), Gaps = 9/212 (4%) Strand = Plus / Plus Query: 457 accgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtg 516 |||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||||| Sbjct: 1 accgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccgta 60 Query: 517 ctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatg 576 || ||||||||||||||||| || | | ||||||||||||||||||||||||||| Sbjct: 61 ---agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatg 116 Query: 577 agccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcg 636 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 117 agccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcg 171 Query: 637 aaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||| ||||||| ||||||||||| Sbjct: 172 aaagcgagtcttcatagggcaattgtcactgc 203
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 506 gtgaaa 511 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 610 gg 611 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 60.0 bits (30), Expect = 1e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 ag 233 || Sbjct: 245 ag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 506 gtgaaa 511 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 610 gg 611 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 agcagcctaa 241 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 541 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 602 tggttaagg 610 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 541 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 602 tggttaagg 610 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 3e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 204 ttcccgtagtagcggcgagcgaaatggga 232 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccg 514 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 49 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 108 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 109 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 168 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 169 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 228 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 229 gggagcagcctaaacc 244 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 633 agcgaaagcgagtcttaatagggc 656 ||||||||||||||| |||||||| Sbjct: 873 agcgaaagcgagtctgaatagggc 896
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 53 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 111 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 112 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 171 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 172 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 231 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 232 ag 233 || Sbjct: 245 ag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 610 gg 611 || Sbjct: 602 gg 603
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 210 bits (106), Expect = 4e-51 Identities = 205/238 (86%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| ||||||||||||||||||||||| || || ||| |||||||| Sbjct: 46 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatcc 105 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 | |||||||| |||||| |||||| || ||| |||| ||| ||| | |||| |||| Sbjct: 106 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagag 165 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 166 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 225 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 226 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 488 tgggtagtgaaatagaacgtgaaacc 513 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 109 bits (55), Expect = 1e-20 Identities = 101/115 (87%), Gaps = 6/115 (5%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 612 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 613 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 | |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 675
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 7e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 140 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 199 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 200 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 7e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 223 cgaaatgggagcagcctaaacc 244 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 634 gcgaaagcgagtcttaatagggcga 658 |||||||||||||| |||||||||| Sbjct: 665 gcgaaagcgagtctgaatagggcga 689
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 7e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 541 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 599 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 48.1 bits (24), Expect = 0.037 Identities = 33/36 (91%) Strand = Plus / Plus Query: 622 accggagccgtagcgaaagcgagtcttaatagggcg 657 ||||||||| ||||||||||||||| ||||||||| Sbjct: 685 accggagcccaagcgaaagcgagtctgaatagggcg 720
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 1e-48 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 603 ggttaagg 610 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 483 cc 484 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 142 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 201 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 202 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 554 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 60.0 bits (30), Expect = 1e-05 Identities = 57/66 (86%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||| | | ||||||||||||||||||||||| ||| | || |||||| Sbjct: 46 acgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatcc 105 Query: 89 ggagat 94 |||||| Sbjct: 106 ggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 488 tgggtagtgaaatagaacgtgaaacc 513 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 174 bits (88), Expect = 2e-40 Identities = 199/236 (84%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| ||||||||||||||||||||||| || || ||| ||| |||| Sbjct: 1813 acgaagaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatcc 1872 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 | |||||||| |||||| ||||| || ||| |||| |||| || | |||| |||| Sbjct: 1873 gaagattcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagag 1932 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 1933 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 1992 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 264 |||||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1993 ttagtagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 483 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 602 tggttaagg 610 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 483 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 602 tggttaagg 610 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||| ||||||||||||||| ||||||||||| Sbjct: 155586 ccggagcccaagcgaaagcgagtctgaatagggcgat 155550 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcgat 659 |||||||| ||||||||||||||| ||||||||||| Sbjct: 78306 ccggagcccaagcgaaagcgagtctgaatagggcgat 78342 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Minus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 117 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 118 a 118 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 2.3 Identities = 51/61 (83%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 117 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 118 a 118 | Sbjct: 77725 a 77725
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 200 bits (101), Expect = 4e-48 Identities = 185/210 (88%), Gaps = 11/210 (5%) Strand = Plus / Plus Query: 459 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 518 |||||||||| |||||||||||||| | ||| ||||||||||||| ||||||||| Sbjct: 1 cgtgagggaagggtgaaaagaaccc--atcggggagtgaaatagaacatgaaaccgta-- 56 Query: 519 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 578 || ||||||||||||||||| || | | ||||||||||||||||||||||||||||| Sbjct: 57 -agttcccaagcagtgggaggagacggggg-ctctgaccgcgtgcctgttgaagaatgag 114 Query: 579 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 638 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115 ccggcgactcataggcagtggcttggttaag-----ggaacccaccggagccgtagcgaa 169 Query: 639 agcgagtcttaatagggcgattgtcactgc 668 |||||||||| ||||||| ||||||||||| Sbjct: 170 agcgagtcttcatagggcaattgtcactgc 199
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 424 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 540 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 601 tt 602 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 223 cgaa 226 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 634 gcgaaagcgagtcttaatagggcg 657 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 223 cgaaatgggagcagcctaaacc 244 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 40.1 bits (20), Expect = 9.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaa 650 |||||||| |||||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa 847
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 219 cgagcgaaatgggagcagcctaaac 243 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcg 735 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 2e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 8e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 223 cgaaatgggagcagcctaaacc 244 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 608 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 424 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 540 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 601 tt 602 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 223 cgaa 226 |||| Sbjct: 219 cgaa 222 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 634 gcgaaagcgagtcttaatagggcg 657 |||||||||||||| ||||||||| Sbjct: 648 gcgaaagcgagtctgaatagggcg 671
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Minus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 151740 ccggagcccaagcgaaagcgagtctgaatagggcg 151706 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 42463 ccggagcccaagcgaaagcgagtctgaatagggcg 42497
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 2e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 424 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 540 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 600 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 601 tt 602 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 223 cgaa 226 |||| Sbjct: 238 cgaa 241 Score = 40.1 bits (20), Expect = 9.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 634 gcgaaagcgagtcttaatagggcg 657 |||||||||||||| ||||||||| Sbjct: 667 gcgaaagcgagtctgaatagggcg 690
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 701 ccggagcccaagcgaaagcgagtctgaatagggcg 735 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 8e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 219 cgagcgaaatgggagcagcctaaac 243 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 3e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 601 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 635 ccggagcccaagcgaaagcgagtctgaatagggcg 669
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 2e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 720 ccggagcccaagcgaaagcgagtctgaatagggcg 754
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 7e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 367 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 426 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 427 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 486 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 487 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 546 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 547 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||| | || |||||||| ||||||||||| || ||| ||||| ||||| Sbjct: 25 acgatgaagggcgtggaaaccgacgaaacgcttcggggagctggaaacaagcaatgatcc 84 Query: 89 ggagattcccaaataggtcaacct 112 |||||||||| |||||| |||||| Sbjct: 85 ggagattcccgaatagggcaacct 108 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcgat 659 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgat 657
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 3e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 472 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 531 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 532 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 581 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 3e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 488 tgggtagtgaaatagaacgtgaaacc 513 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 194 bits (98), Expect = 3e-46 Identities = 203/238 (85%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||||| |||||||||||||||| |||||| || || ||| |||||||| Sbjct: 3080 acgaagaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatcc 3139 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 | |||||||| |||||| |||||| || ||| |||| ||| ||| |||| |||| Sbjct: 3140 gaagattcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagag 3199 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 | ||||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| Sbjct: 3200 aaaacctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattccc 3259 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3260 ttagtagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 109 bits (55), Expect = 1e-20 Identities = 101/115 (87%), Gaps = 6/115 (5%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 612 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 613 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactg 667 | |||||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactg 3709
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 3e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 3e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 49 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 108 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 109 acct 112 |||| Sbjct: 24914 acct 24917 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcgat 659 ||||||||| ||||||||| ||||| ||||||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgat 25466
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 1e-45 Identities = 136/149 (91%) Strand = Plus / Plus Query: 367 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 426 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 427 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 486 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 487 gtgggtagtgaaatagaacgtgaaaccgt 515 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 1e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 560 gtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 1e-45 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 7e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcg 657 |||||||| ||||||||||||||| ||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcg 678 Score = 46.1 bits (23), Expect = 0.15 Identities = 47/55 (85%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 544 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 603 ggttaagg 610 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 623 ccggagccgtagcgaaagcgagtcttaatagggcga 658 |||||||| ||||||||||||||||||||||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcga 851
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 2e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 611 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644 Score = 46.1 bits (23), Expect = 0.15 Identities = 29/31 (93%) Strand = Plus / Plus Query: 627 agccgtagcgaaagcgagtcttaatagggcg 657 |||| |||||||||||||||| ||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcg 686
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 188 bits (95), Expect = 2e-44 Identities = 98/99 (98%) Strand = Plus / Plus Query: 570 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 630 cgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgc 100
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/109 (83%), Gaps = 2/109 (1%) Strand = Plus / Minus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||||||| |||||||| || || Sbjct: 171496 ggtggatacctagg-cacccagag-acgaagaagggcgtagcaaccgacgaaaccctccg 171439 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171438 gggagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/109 (83%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||||||| |||||||| || || Sbjct: 121430 ggtggatacctagg-cacccagag-acgaagaagggcgtagcaaccgacgaaaccctccg 121487 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121488 gggagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/109 (83%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 4 ggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttcg 63 |||||||||||||| ||||||| |||| |||||||||||||| |||||||| || || Sbjct: 21 ggtggatacctagg-cacccagag-acgaagaagggcgtagcaaccgacgaaaccctccg 78 Query: 64 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggaagcaagctctgatccggagattcccgaatagggcaacct 127
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 186 bits (94), Expect = 6e-44 Identities = 97/98 (98%) Strand = Plus / Plus Query: 571 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 631 gtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||| ||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgc 98
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 482 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgt 515 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 182/218 (83%), Gaps = 2/218 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||| | || |||||||| ||||||||||| || | | ||| | ||||| Sbjct: 33 acgatgaagggcgtggtaaccgacgaaacgcttcggggagctggatacgagctttgatcc 92 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc-aggcaaga 147 | |||||||| |||||| |||||| || ||| | | ||||| ||| ||| | | |||| Sbjct: 93 gaagattcccgaatagggcaacctcttggactccttagtgaattcat-agctaagaaaga 151 Query: 148 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 207 || |||| || ||| ||||||||||||||| || ||||||||||||||||| |||||||| Sbjct: 152 gataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcgattcc 211 Query: 208 cgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 | ||||||||||||||||||||||| |||||||||||| Sbjct: 212 cttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 95.6 bits (48), Expect = 2e-16 Identities = 94/109 (86%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 611 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg- 687 Query: 612 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt 660 ||| | |||||||| ||||||||| |||||||||||||||||| Sbjct: 688 ---agaatcatccggagccagagcgaaagcaagtcttaatagggcgatt 733
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 182 bits (92), Expect = 1e-42 Identities = 164/186 (88%), Gaps = 2/186 (1%) Strand = Plus / Plus Query: 3 cggtggatacctaggncacccagnnnacgaggaagggcgtagcaagcgacgaaatgcttc 62 ||||||||||||||| ||||||| |||| |||||||||| || |||||||| ||||| Sbjct: 723 cggtggatacctagg-cacccagag-acgaagaagggcgtactaaccgacgaaacgcttc 780 Query: 63 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 122 |||||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| | Sbjct: 781 ggggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttc 840 Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 ||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 841 ctgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccag 900 Query: 183 aggaaa 188 |||||| Sbjct: 901 aggaaa 906
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 1e-42 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 483 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 539 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 113 bits (57), Expect = 8e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 52 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 111 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 112 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 170 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 171 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 230 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 231 gagcagcctaaac 243 || |||||||||| Sbjct: 229 gaacagcctaaac 241 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 633 agcgaaagcgagtcttaatagggcg 657 ||||||||||||||| ||||||||| Sbjct: 643 agcgaaagcgagtctgaatagggcg 667
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 1e-42 Identities = 137/152 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 34 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 93 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 94 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 153 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 154 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 213 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 214 agcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 180 bits (91), Expect = 4e-42 Identities = 112/119 (94%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 122 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 175
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 180 bits (91), Expect = 4e-42 Identities = 112/119 (94%), Gaps = 5/119 (4%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 610 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 668 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106 -----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 159
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 117 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 118 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 177 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 178 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 237 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 238 ctaaacc 244 ||||||| Sbjct: 253 ctaaacc 259 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 633 agcgaaagcgagtcttaatagggcg 657 ||||||||||||||||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcg 683
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 2e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 2e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 7e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 93.7 bits (47), Expect = 7e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 58 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 117 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 118 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 177 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 178 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 237 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 238 ctaaacc 244 ||||||| Sbjct: 253 ctaaacc 259 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 633 agcgaaagcgagtcttaatagggcg 657 ||||||||||||||||||||||||| Sbjct: 659 agcgaaagcgagtcttaatagggcg 683
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 2e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 542 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 602 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 603 ggttaa 608 |||||| Sbjct: 731 ggttaa 736 Score = 119 bits (60), Expect = 1e-23 Identities = 178/216 (82%), Gaps = 1/216 (0%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||| ||||||||| | || | ||||||||||||| |||| || ||| |||| ||| | Sbjct: 146 acgatgaagggcgtggaaaccaacgaaatgcttcgaggagctggaaacaagctatgattc 205 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 |||||||||| |||||| |||||||||| ||| ||| ||||| ||| ||| ||||| Sbjct: 206 ggagattcccgaatagggcaaccttttatactacctattgaattcatagataggaaagag 265 Query: 149 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 208 |||||| | ||| |||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 266 acaacccagtgaag-gaaacatcttagtagctggaggaaaagaaagcaaacgcgattccc 324 Query: 209 gtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||||||| | ||||||||||| Sbjct: 325 ttagtagcggcgagcgaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 6e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 367 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 426 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 427 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 486 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 487 gtgggtagtgaaatagaacgtgaaaccgt 515 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcga 585 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 633 agcgaaagcgagtcttaatagggcgattgtcac 665 |||||||||||||| |||||||||||| ||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcac 294
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 6e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 484 ccagt-gggtagtgaaatagaacgtgaaaccgt 515 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 610 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 625 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 664 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 6e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 625 ggagccgtagcgaaagcgagtcttaatagggcgattgtca 664 |||||| |||||||||||||||| ||||||||| |||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtca 511 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,266,911 Number of Sequences: 3902068 Number of extensions: 4266911 Number of successful extensions: 126197 Number of sequences better than 10.0: 26656 Number of HSP's better than 10.0 without gapping: 26485 Number of HSP's successfully gapped in prelim test: 206 Number of HSP's that attempted gapping in prelim test: 78873 Number of HSP's gapped (non-prelim): 45046 length of query: 668 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 645 effective length of database: 17,143,297,704 effective search space: 11057427019080 effective search space used: 11057427019080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
