| Clone Name | basd14n22 |
|---|---|
| Clone Library Name | barley_pub |
>BCL9_PIG (Q95KQ6) B-cell lymphoma 9 protein (Bcl-9) (Fragment)| Length = 130 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = +2 Query: 131 PSPKSLSE---PYRSPAAAGGFLGLPEKSHASRRPAAVPQ---GLPQG-PRSRYPPRQHP 289 PSP ++ P+ P G P H S+ P VPQ G PQG P + PP+Q P Sbjct: 15 PSPNAMGPNIPPHGVPMGPGLMSHNPIMGHGSQEPPMVPQGRMGFPQGFPPVQSPPQQVP 74
>CBPS_YEAST (P27614) Carboxypeptidase S (EC 3.4.17.4) (YSCS) (GLY-X| carboxypeptidase) Length = 576 Score = 32.3 bits (72), Expect = 1.3 Identities = 13/40 (32%), Positives = 21/40 (52%) Frame = +1 Query: 448 LSTRFMLMGMHPYPP*KGERASKNSTP*YTPTCNKLRRTS 567 + T F+ G+HP PP + +R P ++P C K+ S Sbjct: 31 IGTFFLTSGLHPAPPHEAKRPHHGKGPMHSPKCEKIEPLS 70
>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC| 2.7.11.1) (Aortic preferentially expressed protein 1) (APEG-1) Length = 3223 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +1 Query: 157 IPVPGSRRGFSRIAGEEPCFTAAGRCPSGAPSRPSKPISTTPTPWRMLSTGPMAAP 324 + +P +R G R+ E P +A +P+RPS P +TP +T P AP Sbjct: 2149 LEIPVARLGARRLQ-ESPSLSALSEAQPSSPARPSAPKPSTPKSAEPSATTPSDAP 2203
>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)| Length = 1425 Score = 32.3 bits (72), Expect = 1.3 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = +2 Query: 131 PSPKSLSE---PYRSPAAAGGFLGLPEKSHASRRPAAVPQ---GLPQG-PRSRYPPRQHP 289 PSP ++ P+ P G P H S+ P VPQ G PQG P + PP+Q P Sbjct: 1092 PSPNAMGPSIPPHGVPMGPGLMSHNPIMGHGSQEPPMVPQGRMGFPQGFPPVQSPPQQVP 1151
>BCL9_HUMAN (O00512) B-cell lymphoma 9 protein (Bcl-9) (Legless homolog)| Length = 1426 Score = 32.0 bits (71), Expect = 1.7 Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 7/60 (11%) Frame = +2 Query: 131 PSPKSLSE---PYRSPAAAGGFLGLPEKSHASRRPAAVPQ---GLPQG-PRSRYPPRQHP 289 PSP ++ P+ P G P H S+ P VPQ G PQG P + PP+Q P Sbjct: 1093 PSPNAVGPNIPPHGVPMGPGLMSHNPIMGHGSQEPPMVPQGRMGFPQGFPPVQSPPQQVP 1152
>PKHA6_HUMAN (Q9Y2H5) Pleckstrin homology domain-containing family A member 6| (Phosphoinositol 3-phosphate-binding protein 3) (PEPP-3) Length = 1048 Score = 32.0 bits (71), Expect = 1.7 Identities = 14/38 (36%), Positives = 18/38 (47%) Frame = +2 Query: 197 PEKSHASRRPAAVPQGLPQGPRSRYPPRQHPGACYPQG 310 PE+ + P GLP GP P PG+ YP+G Sbjct: 223 PERPEVKKEPPVKANGLPAGPE----PASEPGSPYPEG 256
>SF3B4_HUMAN (Q15427) Splicing factor 3B subunit 4 (Spliceosome-associated| protein 49) (SAP 49) (SF3b50) (Pre-mRNA-splicing factor SF3b 49 kDa subunit) Length = 424 Score = 31.6 bits (70), Expect = 2.2 Identities = 23/83 (27%), Positives = 31/83 (37%), Gaps = 1/83 (1%) Frame = +2 Query: 137 PKSLSEPYRSPAAAGGFLGLPEKSHASRRPAAVPQGLPQGPRSRYPPRQHPGACYPQGLW 316 P L P+ P +GG P P P G+P P HPG P G Sbjct: 316 PHGLGHPHAGPPGSGG-QPPPRPPPGMPHPGPPPMGMPPRGPPFGSPMGHPGPMPPHG-- 372 Query: 317 RHLRADEAVLQLHG-SNHPQPYP 382 +R ++ HG + P+P P Sbjct: 373 --MRGPPPLMPPHGYTGPPRPPP 393 Score = 29.6 bits (65), Expect = 8.3 Identities = 25/85 (29%), Positives = 30/85 (35%), Gaps = 1/85 (1%) Frame = +2 Query: 131 PSPKSLSEPYRSPAAAGGFLGLPEKSHASRRPAAVPQGLPQGPRSRYPPRQH-PGACYPQ 307 P P S P P A G+P PA P +P G PP PGA +P Sbjct: 238 PPPGSFPPPVPPPGALPP--GIP--------PAMPPPPMPPGAAGHGPPSAGTPGAGHPG 287 Query: 308 GLWRHLRADEAVLQLHGSNHPQPYP 382 HG +HP P+P Sbjct: 288 ---------------HGHSHPHPFP 297
>PTN23_HUMAN (Q9H3S7) Tyrosine-protein phosphatase non-receptor type 23 (EC| 3.1.3.48) (His-domain-containing protein tyrosine phosphatase) (HD-PTP) (Protein tyrosine phosphatase TD14) (PTP-TD14) Length = 1636 Score = 31.2 bits (69), Expect = 2.9 Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 8/92 (8%) Frame = +2 Query: 131 PSPKSLSEPYRSPAAAGGFLGLPEKSHASRRPAAVPQGLPQ---GPRSRYPPRQHPGACY 301 P P+ L PY P AG +P + H S + +P G P GP+ + P+ HP + Sbjct: 913 PPPQPLPTPYTYP--AGAKQPIPAQHHFS---SGIPAGFPAPRIGPQPQPHPQPHPSQAF 967 Query: 302 -PQGLWRHLRADEAVL---QLHGSNHPQ-PYP 382 PQ + L L Q G PQ PYP Sbjct: 968 GPQPPQQPLPLQHPHLFPPQAPGLLPPQSPYP 999
>LAMBV_CHICK (Q01636) Laminin beta-1 chain variant (Laminin beta-1-2 chain)| (Fragment) Length = 198 Score = 31.2 bits (69), Expect = 2.9 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 8/94 (8%) Frame = +2 Query: 122 RLSPSPKSLSEPYRSPAAAGGFLGLPEKSHASRRPAAVPQGLPQGPR--SRYPPRQHPGA 295 R P P+S + P+ P + P RPAAV G + R SR PP G+ Sbjct: 29 RRHPDPESRAPPHARPRSPPP--PAPSPPPLPPRPAAVRAGRDRVGRVFSRLPPGCAAGS 86 Query: 296 CYPQ------GLWRHLRADEAVLQLHGSNHPQPY 379 CYP G L A G PQPY Sbjct: 87 CYPATGDLLVGRAPRLSASSTC----GLRRPQPY 116
>EGR4_RAT (Q00911) Early growth response protein 4 (EGR-4) (Early response| protein NGFI-C) (Nerve growth factor-induced protein C) (NGFI-C) Length = 478 Score = 30.8 bits (68), Expect = 3.7 Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 24/94 (25%) Frame = +2 Query: 107 SCFLERLSPSPKS------------LSEPYRSPAA----AGGFLGL-----PEKSHASRR 223 SCFLE +P+P S + E P A G LGL PE + ASR Sbjct: 64 SCFLEGPAPTPPSGLSYSGSFFIQAVPEHPHDPEALFNLMSGILGLAPFPSPEAA-ASRS 122 Query: 224 PAAVPQGLPQGPRSRYPPRQHP---GACYPQGLW 316 P VP P GP + P P A +P+ W Sbjct: 123 PLDVP--FPAGPDALLPDLYSPDLSSAAFPEAFW 154
>EGR4_MOUSE (Q9WUF2) Early growth response protein 4 (EGR-4)| Length = 478 Score = 30.8 bits (68), Expect = 3.7 Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 24/94 (25%) Frame = +2 Query: 107 SCFLERLSPSPKS------------LSEPYRSPAA----AGGFLGL-----PEKSHASRR 223 SCFLE +P+P S + E P A G LGL PE + ASR Sbjct: 64 SCFLEGPAPTPPSGLSYSGSFFIQAVPEHPHDPEALFNLMSGILGLAPFPGPEAA-ASRS 122 Query: 224 PAAVPQGLPQGPRSRYPPRQHP---GACYPQGLW 316 P VP P GP + P P A +P+ W Sbjct: 123 PLDVP--FPAGPDALLPDLYSPDLSSAAFPEAFW 154
>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556| Length = 348 Score = 30.8 bits (68), Expect = 3.7 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%) Frame = +2 Query: 104 ASCFLERLSPSPKSLSEPYRSPAAAGGFLGLPEKSHASR-RPAAVPQGLPQGPRSRYPPR 280 A L P S S P + AA LP ++ S RP++ P P P +R PPR Sbjct: 228 AGSLLPAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRP-ARPPIPAARPPPR 286 Query: 281 QHPGACYP 304 + PG P Sbjct: 287 RTPGTPRP 294
>GTSE1_MOUSE (Q8R080) G2 and S phase expressed protein 1 (Gtse-1) (B99 protein)| Length = 741 Score = 30.4 bits (67), Expect = 4.9 Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Frame = +1 Query: 187 SRIAGEEPCFTAAGRCPSGAPSRPSKPIST-----TPTP-WRMLSTGPMAAPACR*GCPT 348 SR+ P ++G P G P P+ST PTP R LS+ P+ AP Sbjct: 481 SRVVSSTPVRRSSGTTPQGLPGSMRTPLSTRRMSVLPTPASRRLSSLPLMAPQSMPRALV 540 Query: 349 APWLQSSSTLSS 384 +P + LSS Sbjct: 541 SPLCVPARRLSS 552
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 30.4 bits (67), Expect = 4.9 Identities = 20/55 (36%), Positives = 24/55 (43%) Frame = +1 Query: 187 SRIAGEEPCFTAAGRCPSGAPSRPSKPISTTPTPWRMLSTGPMAAPACR*GCPTA 351 SR+ G PC AGR P+ A R + S PT W L P + P P A Sbjct: 40 SRLGGR-PCMCTAGRRPNRASGRRRRSCSPAPT-WPPLCCYPQSRPTASAAGPGA 92
>AFF1_HUMAN (P51825) AF4/FMR2 family member 1 (AF-4 protein) (Proto-oncogene| AF4) (FEL protein) Length = 1210 Score = 30.0 bits (66), Expect = 6.4 Identities = 11/18 (61%), Positives = 13/18 (72%) Frame = +2 Query: 236 PQGLPQGPRSRYPPRQHP 289 P P+GPRS PPR+HP Sbjct: 525 PAAPPEGPRSTEPPRRHP 542
>APD14_APIME (Q06601) Apidaecins type 14 precursor [Contains: Apidaecin-2| (Apidaecin II); Apidaecin-1B (Apidaecin IB); Apidaecin-1A (Apidaecin IA)] Length = 168 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/32 (40%), Positives = 15/32 (46%) Frame = +2 Query: 197 PEKSHASRRPAAVPQGLPQGPRSRYPPRQHPG 292 PE + RP +PQ P PR R P PG Sbjct: 120 PEAEPGNNRPVYIPQPRPPHPRLRREPEAEPG 151
>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)| Length = 5183 Score = 30.0 bits (66), Expect = 6.4 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 14/73 (19%) Frame = +2 Query: 128 SPSPKSLSEPYRSPAAAGGFLGLPEKSHASRRPAAVPQGL--------------PQGPRS 265 +P P + +SPA A G P K+ A +P + G PQ P S Sbjct: 417 TPKPLAQQPGLQSPAKAPG----PTKTPAQTKPPSQQPGSTKPPPQQPGPAKPSPQQPGS 472 Query: 266 RYPPRQHPGACYP 304 PP Q PG+ P Sbjct: 473 TKPPSQQPGSAKP 485
>ZN575_HUMAN (Q86XF7) Zinc finger protein 575| Length = 245 Score = 30.0 bits (66), Expect = 6.4 Identities = 24/72 (33%), Positives = 25/72 (34%), Gaps = 8/72 (11%) Frame = +2 Query: 191 GLPEKSHASRRPAAVPQGLPQGPRSRYPPRQHPGAC--------YPQGLWRHLRADEAVL 346 G P+K S G P PR R PP Q P C YP L H A Sbjct: 31 GPPQKPSQSAPGPTASAGSPPRPRRR-PPPQRPHRCPDCDKAFSYPSKLATHRLA----- 84 Query: 347 QLHGSNHPQPYP 382 HG P P P Sbjct: 85 --HGGARPHPCP 94
>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)| (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene TRE-2) Length = 1406 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/65 (30%), Positives = 27/65 (41%) Frame = +1 Query: 139 QVSLRTIPVPGSRRGFSRIAGEEPCFTAAGRCPSGAPSRPSKPISTTPTPWRMLSTGPMA 318 Q SL PVP SR G + G + P G P++ +PI + PW + P Sbjct: 364 QGSLAPRPVPASRGGKTLCKGYR-------QAPPGPPAQFQRPICSASPPWASRFSTPCP 416 Query: 319 APACR 333 A R Sbjct: 417 GGAVR 421
>SSBP3_RAT (Q9R050) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) Length = 361 Score = 30.0 bits (66), Expect = 6.4 Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = +2 Query: 131 PSPKSLSEPYRSPAAAGGFLGLPEKSHASRRPAAVPQGLPQGPRSRYPPRQ--HP 289 P P +P+ SP AGG P ++ P VP P P S P RQ HP Sbjct: 115 PIPPGFFQPFMSPRYAGG--PRPPIRMGNQPPGGVPGTQPLMPNSMDPTRQQGHP 167
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 30.0 bits (66), Expect = 6.4 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 8/32 (25%) Frame = +3 Query: 567 MAKDCGKEKGW--------CKGDGVSGGRKLY 638 + KDCGK + W CKGDG G K++ Sbjct: 183 LKKDCGKNRDWSDSSCSCECKGDGKCQGSKIW 214
>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)| Length = 641 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Frame = +2 Query: 125 LSPSPKSLSEPYRSPAAAGGFLG-----LPEKSHASRRPA---AVPQGLPQGPRSRYPPR 280 L P P + P+ P G G LP R P P GLP GP R PP Sbjct: 430 LPPGPPPGAPPFLRPPGMPGIRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489 Query: 281 QHPGACYP 304 + P P Sbjct: 490 RLPPPAPP 497
>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)| Length = 641 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Frame = +2 Query: 125 LSPSPKSLSEPYRSPAAAGGFLG-----LPEKSHASRRPA---AVPQGLPQGPRSRYPPR 280 L P P + P+ P G G LP R P P GLP GP R PP Sbjct: 430 LPPGPPPGAPPFLRPPGMPGIRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489 Query: 281 QHPGACYP 304 + P P Sbjct: 490 RLPPPAPP 497
>WBP11_HUMAN (Q9Y2W2) WW domain-binding protein 11 (WBP-11) (SH3 domain-binding| protein SNP70) (Npw38-binding protein) (NpwBP) Length = 641 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 8/68 (11%) Frame = +2 Query: 125 LSPSPKSLSEPYRSPAAAGGFLG-----LPEKSHASRRPA---AVPQGLPQGPRSRYPPR 280 L P P + P+ P G G LP R P P GLP GP R PP Sbjct: 430 LPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPP 489 Query: 281 QHPGACYP 304 + P P Sbjct: 490 RLPPPAPP 497
>DPY2_CAEEL (P35799) Cuticle collagen dpy-2 precursor (Protein dumpy-2)| Length = 360 Score = 29.6 bits (65), Expect = 8.3 Identities = 22/67 (32%), Positives = 26/67 (38%), Gaps = 8/67 (11%) Frame = +2 Query: 131 PSPKSLSEPYRSPAAAG-----GFLGLP-EKSHASRRPAAVPQGLP--QGPRSRYPPRQH 286 P L P+ P +AG G+ G P EK A P G+P GP P Sbjct: 240 PGDSGLPGPWGPPGSAGMPGEDGYAGTPGEKGWPGPPGAPGPGGMPGPNGPTGEQGPSGT 299 Query: 287 PGACYPQ 307 PG C Q Sbjct: 300 PGTCVCQ 306
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 29.6 bits (65), Expect = 8.3 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%) Frame = +1 Query: 235 PSGAP--SRPSKPISTTPTPWRMLSTGPMAAPACR*GCPTAPWLQSSSTLSSG 387 P+G+P + PS P +T T +GP AP TAP + SSS+ SSG Sbjct: 203 PAGSPFGAAPSAPSHSTTT------SGPPTAPTPTSPFGTAPMVLSSSSTSSG 249
>DSCR6_HUMAN (P57055) Down syndrome critical region protein 6| Length = 190 Score = 29.6 bits (65), Expect = 8.3 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 1/42 (2%) Frame = +1 Query: 232 CPSGAPSRPSKPIST-TPTPWRMLSTGPMAAPACR*GCPTAP 354 CP AP RP P +P PWR P A R G P P Sbjct: 19 CPGDAPWRPPPPRGPESPAPWRPWIQTPGDAELTRTGRPLEP 60
>ANTR1_MOUSE (Q9CZ52) Anthrax toxin receptor 1 precursor (Tumor endothelial| marker 8) Length = 562 Score = 29.6 bits (65), Expect = 8.3 Identities = 18/44 (40%), Positives = 21/44 (47%) Frame = +1 Query: 223 AGRCPSGAPSRPSKPISTTPTPWRMLSTGPMAAPACR*GCPTAP 354 A CP APS P+ PI P+P L P A P R P+ P Sbjct: 516 APHCPPPAPSAPTPPI---PSPPSTLPPPPQAPPPNRAPPPSRP 556
>FBLN4_HUMAN (O95967) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (UPH1 protein) Length = 443 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 179 GGFLGLPEKSHASRRPAAVPQGLP-QGPRSRYPPRQHPGACYP 304 GG+L LP R AAV L +GP PP QHP C P Sbjct: 76 GGYLCLP-------RSAAVINDLHGEGPPPPVPPAQHPNPCPP 111
>FBLN4_CRIGR (O55058) EGF-containing fibulin-like extracellular matrix protein 2| precursor (Fibulin-4) (FIBL-4) (H411 protein) Length = 443 Score = 29.6 bits (65), Expect = 8.3 Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 1/43 (2%) Frame = +2 Query: 179 GGFLGLPEKSHASRRPAAVPQGLP-QGPRSRYPPRQHPGACYP 304 GG+L LP R AAV L +GP PP QHP C P Sbjct: 76 GGYLCLP-------RSAAVINDLHGEGPPPPVPPAQHPNPCPP 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,113,631 Number of Sequences: 219361 Number of extensions: 1903695 Number of successful extensions: 7815 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 6934 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7741 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6314008338 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)