Clone Information

BLAST Search Result

Clone Name	basd14m22
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	SPC18_MOUSE (Q9R0P6) Microsomal signal peptidase 18 kDa subunit ...	214	2e-55
2	SPC18_PONPY (Q5R9C7) Microsomal signal peptidase 18 kDa subunit ...	213	3e-55
3	SPC18_HUMAN (P67812) Microsomal signal peptidase 18 kDa subunit ...	213	3e-55
4	SPC18_CANFA (P67811) Microsomal signal peptidase 18 kDa subunit ...	213	3e-55
5	SPC18_BOVIN (P67810) Microsomal signal peptidase 18 kDa subunit ...	213	3e-55
6	SPC18_RAT (P42667) Microsomal signal peptidase 18 kDa subunit (E...	211	2e-54
7	SPC21_CANFA (P13679) Microsomal signal peptidase 21 kDa subunit ...	210	4e-54
8	SPC21_RAT (Q9WTR7) Microsomal signal peptidase 21 kDa subunit (E...	209	6e-54
9	SPC21_PONPY (Q5RC30) Microsomal signal peptidase 21 kDa subunit ...	209	8e-54
10	SPC21_MOUSE (Q9D8V7) Microsomal signal peptidase 21 kDa subunit ...	209	8e-54
11	SPC21_HUMAN (Q9BY50) Microsomal signal peptidase 21 kDa subunit ...	209	8e-54
12	SEC11_YEAST (P15367) Signal sequence-processing protein SEC11 (E...	143	4e-34
13	LEPW_BACSU (P54506) Signal peptidase I W (EC 3.4.21.89) (SPase I...	43	7e-04
14	NU4M_CHOCR (P48915) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	37	0.070
15	KS6A6_HUMAN (Q9UK32) Ribosomal protein S6 kinase alpha-6 (EC 2.7...	32	1.3
16	FBX42_PONPY (Q5RDA9) F-box only protein 42	32	1.3
17	FBX42_HUMAN (Q6P3S6) F-box only protein 42	32	1.3
18	SH2D3_HUMAN (Q8N5H7) SH2 domain-containing protein 3C (Novel SH2...	32	2.2
19	RMAR_KLULA (Q6DN56) Mitochondrial ribosomal protein VAR1	31	2.9
20	NU4M_ARATH (P93313) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	31	2.9
21	SMS1_RAT (Q7TSX5) Phosphatidylcholine:ceramide cholinephosphotra...	31	3.8
22	SMS1_MOUSE (Q8VCQ6) Phosphatidylcholine:ceramide cholinephosphot...	31	3.8
23	SMS1_HUMAN (Q86VZ5) Phosphatidylcholine:ceramide cholinephosphot...	31	3.8
24	SMS1_CHICK (Q7T3T4) Phosphatidylcholine:ceramide cholinephosphot...	30	5.0
25	NU4M_WHEAT (P27572) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	30	5.0
26	GPDA_PARUW (Q6MF42) Glycerol-3-phosphate dehydrogenase [NAD(P)+]...	30	6.5
27	NU4M_MARPO (P26848) NADH-ubiquinone oxidoreductase chain 4 (EC 1...	30	6.5
28	SMS2_MOUSE (Q9D4B1) Phosphatidylcholine:ceramide cholinephosphot...	30	8.5

>SPC18_MOUSE (Q9R0P6) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)|
           (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18)
           (SEC11-like 1) (Sid 2895)
          Length = 179

 Score =  214 bits (544), Expect = 2e-55
 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 85  DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 264
           D ++ +R M  RQ+  Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG
Sbjct: 5   DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64

Query: 265 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 441
           D+LFL +  +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q+ G +  LTKGDNN  DDR
Sbjct: 65  DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123

Query: 442 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
            LY QGQ WL+K  ++GRA G++PY+G VTI+M + P  KY ++  LGL V+  +E
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179

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>SPC18_PONPY (Q5R9C7) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)|
           (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18)
           (SEC11-like 1)
          Length = 179

 Score =  213 bits (543), Expect = 3e-55
 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 85  DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 264
           D ++ +R M  RQ+  Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG
Sbjct: 5   DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64

Query: 265 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 441
           D+LFL +  +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G +  LTKGDNN  DDR
Sbjct: 65  DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123

Query: 442 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
            LY QGQ WL+K  ++GRA G++PY+G VTI+M + P  KY ++  LGL V+  +E
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179

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>SPC18_HUMAN (P67812) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)|
           (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18)
           (SEC11-like 1)
          Length = 179

 Score =  213 bits (543), Expect = 3e-55
 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 85  DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 264
           D ++ +R M  RQ+  Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG
Sbjct: 5   DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64

Query: 265 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 441
           D+LFL +  +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G +  LTKGDNN  DDR
Sbjct: 65  DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123

Query: 442 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
            LY QGQ WL+K  ++GRA G++PY+G VTI+M + P  KY ++  LGL V+  +E
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179

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>SPC18_CANFA (P67811) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)|
           (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18)
           (SEC11-like 1)
          Length = 179

 Score =  213 bits (543), Expect = 3e-55
 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 85  DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 264
           D ++ +R M  RQ+  Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG
Sbjct: 5   DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64

Query: 265 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 441
           D+LFL +  +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G +  LTKGDNN  DDR
Sbjct: 65  DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123

Query: 442 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
            LY QGQ WL+K  ++GRA G++PY+G VTI+M + P  KY ++  LGL V+  +E
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179

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>SPC18_BOVIN (P67810) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)|
           (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18)
           (SEC11-like 1)
          Length = 179

 Score =  213 bits (543), Expect = 3e-55
 Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 85  DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 264
           D ++ +R M  RQ+  Q+++ GMIV+SAL+IWKGLMV TGSESP+VVVLSGSMEP F RG
Sbjct: 5   DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVVVLSGSMEPAFHRG 64

Query: 265 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 441
           D+LFL +  +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q +G +  LTKGDNN  DDR
Sbjct: 65  DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQ-NGHIKFLTKGDNNAVDDR 123

Query: 442 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
            LY QGQ WL+K  ++GRA G++PY+G VTI+M + P  KY ++  LGL V+  +E
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFKYAVLFLLGLFVLVHRE 179

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>SPC18_RAT (P42667) Microsomal signal peptidase 18 kDa subunit (EC 3.4.-.-)|
           (SPase 18 kDa subunit) (SPC18) (Endopeptidase SP18)
           (SEC11-like 1)
          Length = 179

 Score =  211 bits (536), Expect = 2e-54
 Identities = 104/176 (59%), Positives = 136/176 (77%), Gaps = 1/176 (0%)
 Frame = +1

Query: 85  DQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRG 264
           D ++ +R M  RQ+  Q+++ GMIV+SAL+IWKGLM+ TGSESP+VVVLSGSMEP F RG
Sbjct: 5   DFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMLITGSESPIVVVLSGSMEPAFHRG 64

Query: 265 DILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDR 441
           D+LFL +  +DPIR GEIVVF I+GREIPIVHRV+K+HE+Q+ G +  LTKGDNN  DDR
Sbjct: 65  DLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIHEKQD-GHIKFLTKGDNNAVDDR 123

Query: 442 LLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
            LY QGQ WL+K  ++GRA G++PY+G VTI+M + P   Y ++  LGL V+  +E
Sbjct: 124 GLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYPKFSYAVLFLLGLFVLVHRE 179

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>SPC21_CANFA (P13679) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)|
           (SPase 21 kDa subunit) (SPC21) (SEC11-like 3)
          Length = 191

 Score =  210 bits (534), Expect = 4e-54
 Identities = 107/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
 Frame = +1

Query: 49  GREIPAE-MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 225
           G  +PA  +   GD    +R M  RQ+  Q+++  MIV+SAL+IWKGL+V TGSESP+VV
Sbjct: 7   GTHLPASGLDIFGD----LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 62

Query: 226 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 402
           VLSGSMEP F RGD+LFL +  +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ 
Sbjct: 63  VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 121

Query: 403 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 582
            LTKGDNN  DDR LY +GQ WL+K  ++GRA G+LPYVG VTI+M + P  KY L+  +
Sbjct: 122 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 181

Query: 583 GLLVITSKE 609
           G  V+  +E
Sbjct: 182 GAYVLLKRE 190

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>SPC21_RAT (Q9WTR7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)|
           (SPase 21 kDa subunit) (SPC21) (SEC11-like 3)
          Length = 191

 Score =  209 bits (532), Expect = 6e-54
 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
 Frame = +1

Query: 49  GREIP-AEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 225
           G  +P + +   GD    +R M  RQ+  Q+++  MIV+SAL+IWKGL+V TGSESP+VV
Sbjct: 7   GTHLPTSSLDIFGD----LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 62

Query: 226 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 402
           VLSGSMEP F RGD+LFL +  +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ 
Sbjct: 63  VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 121

Query: 403 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 582
            LTKGDNN  DDR LY +GQ WL+K  ++GRA G+LPYVG VTI+M + P  KY L+  +
Sbjct: 122 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALVAVM 181

Query: 583 GLLVITSKE 609
           G  V+  +E
Sbjct: 182 GAYVLLKRE 190

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>SPC21_PONPY (Q5RC30) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)|
           (SPase 21 kDa subunit) (SPC21) (SEC11-like 3)
          Length = 191

 Score =  209 bits (531), Expect = 8e-54
 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
 Frame = +1

Query: 49  GREIPAE-MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 225
           G  +PA  +   GD    ++ M  RQ+  Q+++  MIV+SAL+IWKGL+V TGSESP+VV
Sbjct: 7   GAHLPASGLDIFGD----LKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 62

Query: 226 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 402
           VLSGSMEP F RGD+LFL +  +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ 
Sbjct: 63  VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 121

Query: 403 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 582
            LTKGDNN  DDR LY +GQ WL+K  ++GRA G+LPYVG VTI+M + P  KY L+  +
Sbjct: 122 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 181

Query: 583 GLLVITSKE 609
           G  V+  +E
Sbjct: 182 GAYVLLKRE 190

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>SPC21_MOUSE (Q9D8V7) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)|
           (SPase 21 kDa subunit) (SPC21) (SEC11-like 3)
          Length = 191

 Score =  209 bits (531), Expect = 8e-54
 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
 Frame = +1

Query: 49  GREIP-AEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 225
           G  +P + +   GD    +R M  RQ+  Q+++  MIV+SAL+IWKGL+V TGSESP+VV
Sbjct: 7   GTHLPTSSLDIFGD----LRKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 62

Query: 226 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 402
           VLSGSMEP F RGD+LFL +  +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ 
Sbjct: 63  VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 121

Query: 403 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 582
            LTKGDNN  DDR LY +GQ WL+K  ++GRA G+LPYVG VTI+M + P  KY L+  +
Sbjct: 122 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 181

Query: 583 GLLVITSKE 609
           G  V+  +E
Sbjct: 182 GAYVLLKRE 190

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>SPC21_HUMAN (Q9BY50) Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-)|
           (SPase 21 kDa subunit) (SPC21) (SEC11-like 3)
          Length = 191

 Score =  209 bits (531), Expect = 8e-54
 Identities = 106/189 (56%), Positives = 140/189 (74%), Gaps = 2/189 (1%)
 Frame = +1

Query: 49  GREIPAE-MGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVV 225
           G  +PA  +   GD    ++ M  RQ+  Q+++  MIV+SAL+IWKGL+V TGSESP+VV
Sbjct: 7   GAHLPASGLDIFGD----LKKMNKRQLYYQVLNFAMIVSSALMIWKGLIVLTGSESPIVV 62

Query: 226 VLSGSMEPGFKRGDILFL-HMSQDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVD 402
           VLSGSMEP F RGD+LFL +  +DPIR GEIVVF ++GR+IPIVHRVIKVHE+ ++G++ 
Sbjct: 63  VLSGSMEPAFHRGDLLFLTNFREDPIRAGEIVVFKVEGRDIPIVHRVIKVHEK-DNGDIK 121

Query: 403 ILTKGDNNFGDDRLLYAQGQLWLQKHHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGAL 582
            LTKGDNN  DDR LY +GQ WL+K  ++GRA G+LPYVG VTI+M + P  KY L+  +
Sbjct: 122 FLTKGDNNEVDDRGLYKEGQNWLEKKDVVGRARGFLPYVGMVTIIMNDYPKFKYALLAVM 181

Query: 583 GLLVITSKE 609
           G  V+  +E
Sbjct: 182 GAYVLLKRE 190

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>SEC11_YEAST (P15367) Signal sequence-processing protein SEC11 (EC 3.4.-.-)|
          Length = 167

 Score =  143 bits (361), Expect = 4e-34
 Identities = 73/168 (43%), Positives = 110/168 (65%), Gaps = 1/168 (0%)
 Frame = +1

Query: 109 MQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVVLSGSMEPGFKRGDILFLHMS 288
           M +R  L +++++  +  SA + W+GL +AT S SP+VVVLSGSMEP F+RGDILFL   
Sbjct: 1   MNLRFELQKLLNVCFLFASAYMFWQGLAIATNSASPIVVVLSGSMEPAFQRGDILFLWNR 60

Query: 289 QDPIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLW 468
               + G++VV+ ++G++IPIVHRV++ H      +  +LTKGDNN G+D  LYA  +++
Sbjct: 61  NTFNQVGDVVVYEVEGKQIPIVHRVLRQHNNHADKQF-LLTKGDNNAGNDISLYANKKIY 119

Query: 469 LQK-HHIMGRAVGYLPYVGWVTIVMTEKPIIKYLLIGALGLLVITSKE 609
           L K   I+G   GY P +G++TI ++E    K+ L+G LGL  +   E
Sbjct: 120 LNKSKEIVGTVKGYFPQLGYITIWISENKYAKFALLGMLGLSALLGGE 167

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>LEPW_BACSU (P54506) Signal peptidase I W (EC 3.4.21.89) (SPase I) (Leader|
           peptidase I)
          Length = 190

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
 Frame = +1

Query: 145 LGMIVTSALIIWKGLMVATGSES--PVVV------VLSGSMEPGFKRGDILFLHMSQD-- 294
           L +I+ + +I+   ++++T S    P V       VLSGSMEP F  G ++ +    D  
Sbjct: 8   LYVIIFTLIIVLTLVVISTRSSGGEPAVFGYTLKSVLSGSMEPEFNTGSLILVKEITDVK 67

Query: 295 PIRTGEIVVFNIDGREIPIVHRVIKVHERQESGEVDILTKGDNNFGDDRLLYAQGQLWLQ 474
            ++ G+++ F  D     + HR++ +   ++   +   TKGDNN   D          + 
Sbjct: 68  ELQKGDVITFMQDA-NTAVTHRIVDI--TKQGDHLLFKTKGDNNAAAD-------SAPVS 117

Query: 475 KHHIMGRAVGY-LPYVGWVTIVMTEKPIIKYLLIGALGLLVI 597
             ++  +  G+ LPY G++ +    +PI   +L+   G++++
Sbjct: 118 DENVRAQYTGFQLPYAGYM-LHFASQPIGTAVLLIVPGVMLL 158

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>NU4M_CHOCR (P48915) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 492

 Score = 36.6 bits (83), Expect = 0.070
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = +1

Query: 40  SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGS 207
           +FA    P    FIG+ +  + S Q+ + LT   SLGMI  +A  IW    +  GS
Sbjct: 382 TFANLGFPGTSSFIGEVLVLLSSFQINKTLTLFASLGMIFGAAYSIWLFNRIIFGS 437

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>KS6A6_HUMAN (Q9UK32) Ribosomal protein S6 kinase alpha-6 (EC 2.7.11.1)|
           (S6K-alpha 6) (90 kDa ribosomal protein S6 kinase 6)
           (p90-RSK 6) (Ribosomal S6 kinase 4) (RSK-4) (pp90RSK4)
          Length = 745

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
 Frame = +1

Query: 250 GFKRGDILFLHMSQDPIRTGEIVVFNIDG--REIPIVHRVIKVHERQESGEVDIL-TKGD 420
           G   G++  L M  +P+  GE    + +G  +EIPI H V + +E+ +  + ++L   G 
Sbjct: 22  GASSGEVNGLKMVDEPMEEGEADSCHDEGVVKEIPITHHVKEGYEKADPAQFELLKVLGQ 81

Query: 421 NNFGDDRLLYAQ-----GQLWLQK 477
            +FG   L+  +     GQL+  K
Sbjct: 82  GSFGKVFLVRKKTGPDAGQLYAMK 105

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>FBX42_PONPY (Q5RDA9) F-box only protein 42|
          Length = 717

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 347 GISRPSILKTTISPVRIGSWLMCKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 183
           G  RP   + T S  R GS    +   SP+LN GS+ P      G SL  PV  I+P
Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465

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>FBX42_HUMAN (Q6P3S6) F-box only protein 42|
          Length = 717

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = -3

Query: 347 GISRPSILKTTISPVRIGSWLMCKNRISPLLNPGSMLPERTTTTGDSL--PVATINP 183
           G  RP   + T S  R GS    +   SP+LN GS+ P      G SL  PV  I+P
Sbjct: 409 GTLRPRAQRQTPSGSREGSLSPARGDGSPILNGGSLSPGTAAVGGSSLDSPVQAISP 465

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>SH2D3_HUMAN (Q8N5H7) SH2 domain-containing protein 3C (Novel SH2-containing|
           protein 3)
          Length = 860

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 23/75 (30%), Positives = 33/75 (44%)
 Frame = -3

Query: 269 ISPLLNPGSMLPERTTTTGDSLPVATINPFHMINAEVTIIPRLMICVRTWRTCIDRIDST 90
           +SP    GS +  R+ T  D L    +          T +PR    +R+    +D+I   
Sbjct: 345 VSPSGPKGSHMKRRSVTMTDGLTADKVTRSDGCPTS-TSLPRPRDSIRSCALSMDQIPDL 403

Query: 89  WSPMNPISAGISLPA 45
            SPM+PIS   S PA
Sbjct: 404 HSPMSPISESPSSPA 418

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>RMAR_KLULA (Q6DN56) Mitochondrial ribosomal protein VAR1|
          Length = 388

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
 Frame = -2

Query: 450 IQKSVIPKIIITF---REDINFSTFLAFMNLNHTVNNWNFTAINIKNNYFSSADRILAHV 280
           I K +I K I      + +I F  +L++ N+N  +NN N    NI +NY  + +  L ++
Sbjct: 110 IYKLIISKPIFEHSINKVNIKFFYYLSYKNINKNINNNNNLINNIYSNYKFNINSKLINL 169

Query: 279 QKQNITPFKSRL 244
              NI    + L
Sbjct: 170 LNNNINSISNIL 181

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>NU4M_ARATH (P93313) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 495

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = +1

Query: 40  SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESP 216
           + A   +P    FIG+ +  + + Q   ++  + +LGMI+ +A  +W    V +G+  P
Sbjct: 385 TLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVSGNLKP 443

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>SMS1_RAT (Q7TSX5) Phosphatidylcholine:ceramide cholinephosphotransferase 1|
           (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin
           synthase 1) (Mob protein)
          Length = 419

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 191 WLRQGASRRLWWFFLVAWSLDLKGVIFC 274
           ++++ + RRLWW+  + W L + G IFC
Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327

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>SMS1_MOUSE (Q8VCQ6) Phosphatidylcholine:ceramide cholinephosphotransferase 1|
           (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin
           synthase 1) (Mob protein)
          Length = 419

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 191 WLRQGASRRLWWFFLVAWSLDLKGVIFC 274
           ++++ + RRLWW+  + W L + G IFC
Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327

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>SMS1_HUMAN (Q86VZ5) Phosphatidylcholine:ceramide cholinephosphotransferase 1|
           (EC 2.7.-.-) (Transmembrane protein 23) (Sphingomyelin
           synthase 1) (Mob protein)
          Length = 419

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 191 WLRQGASRRLWWFFLVAWSLDLKGVIFC 274
           ++++ + RRLWW+  + W L + G IFC
Sbjct: 301 FIKEYSPRRLWWYHWICWLLSVVG-IFC 327

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>SMS1_CHICK (Q7T3T4) Phosphatidylcholine:ceramide cholinephosphotransferase 1|
           (EC 2.7.-.-) (Sphingomyelin synthase 1) (MOB protein)
          Length = 417

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +2

Query: 191 WLRQGASRRLWWFFLVAWSLDLKGVIFC 274
           ++++ + RRLWW+  + W+L + G +FC
Sbjct: 299 FIKEYSPRRLWWYHWLCWTLSMVG-MFC 325

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>NU4M_WHEAT (P27572) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 495

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = +1

Query: 40  SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESP 216
           + A   +P    FIG+ +  + + Q   ++  + +LGMI+ +A  +W    V +G+  P
Sbjct: 385 TLANMSLPGTSSFIGEFLILVGAFQRNSLVATLRALGMILGAAYSLWLYNRVVSGNLKP 443

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>GPDA_PARUW (Q6MF42) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 333

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = +1

Query: 91  VESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESPVVVV 228
           VES+ S  +R V  Q+ SLG+     +I  KG+   TG   P VV+
Sbjct: 75  VESVTSAGLRSVFEQVRSLGLPNCPIVITSKGIEQDTGMILPEVVI 120

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>NU4M_MARPO (P26848) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 495

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 15/59 (25%), Positives = 29/59 (49%)
 Frame = +1

Query: 40  SFAGREIPAEMGFIGDQVESIRSMQVRQVLTQIISLGMIVTSALIIWKGLMVATGSESP 216
           + A   +P    FIG+ +  + + Q   ++  + +LGMI+ +A  +W    V  G+  P
Sbjct: 385 TLANMSLPGTSSFIGEFLILVGAFQRNSLVATLAALGMILGAAYSLWLYNRVVFGNFKP 443

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>SMS2_MOUSE (Q9D4B1) Phosphatidylcholine:ceramide cholinephosphotransferase 2|
           (EC 2.7.-.-) (Sphingomyelin synthase 2)
          Length = 365

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 WLRQGASRRLWWFFLVAWSLDLKGVI 268
           ++++ + R  WW+ LV W L   G+I
Sbjct: 239 FIKEYSPRHFWWYHLVCWLLSAAGII 264


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,667,704
Number of Sequences: 219361
Number of extensions: 1973171
Number of successful extensions: 5673
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5648
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6427774254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result