ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd14m16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188794.1| Oryza sativa (japonica cultivar-group), predic... 228 2e-56
2dbj|AK061748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 228 2e-56
3dbj|AK066274.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 6e-53
4gb|BT018355.1| Zea mays clone EL01T0403H09.c mRNA sequence 137 4e-29
5gb|AY108494.1| Zea mays PCO113418 mRNA sequence 137 4e-29
6gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, ... 82 2e-12
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
8dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
9dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
10dbj|AK069846.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
11dbj|AK059427.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
12gb|BT016477.1| Zea mays clone Contig310 mRNA sequence 54 5e-04
13dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
14gb|AY106845.1| Zea mays PCO147512 mRNA sequence 54 5e-04
15emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c2... 52 0.002
16dbj|AK058475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
17ref|NM_189297.1| Oryza sativa (japonica cultivar-group), predic... 50 0.008
18gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
19gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete seq... 50 0.008
20dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
21dbj|AK062385.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
22gb|AF061157.1|AF061157 Vernicia fordii negatively light-regulate... 50 0.008
23ref|NM_125809.3| Arabidopsis thaliana unknown protein AT5G64130 ... 48 0.031
24ref|NM_001037057.1| Arabidopsis thaliana unknown protein AT5G641... 48 0.031
25gb|AY097399.1| Arabidopsis thaliana AT5g64130/MHJ24_11 mRNA, com... 48 0.031
26gb|AY058135.1| Arabidopsis thaliana AT5g64130/MHJ24_11 mRNA, com... 48 0.031
27emb|BX834062.1|CNS0A26V Arabidopsis thaliana Full-length cDNA Co... 48 0.031
28gb|AY084225.1| Arabidopsis thaliana clone 10032 mRNA, complete s... 48 0.031
29dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.031
30dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.031
31dbj|AK062656.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
32dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.48
33gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete... 42 1.9
34ref|XM_633933.1| Dictyostelium discoideum hypothetical protein (... 42 1.9
35gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 42 1.9
36emb|AJ223492.1|TAIMA1 Triticum aestivum mRNA for monomeric alpha... 42 1.9
37gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, r... 42 1.9
38gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, r... 42 1.9
39gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59... 42 1.9
40gb|BT017304.1| Zea mays clone EL01N0316E01.c mRNA sequence 40 7.4
41gb|AY430193.1| Amphitmetus transversus clone MS 91 microsatellit... 40 7.4
42gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.4
43gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 7.4
44gb|AC104789.4| Homo sapiens BAC clone RP11-138B1 from 7, complet... 40 7.4
45gb|AC104897.7| Mus musculus chromosome 12, clone RP23-300E12, co... 40 7.4
46gb|CP000001.1| Bacillus cereus E33L, complete genome 40 7.4
47gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, compl... 40 7.4
48gb|AC159822.2| Mus musculus BAC clone RP23-152C21 from chromosom... 40 7.4
49gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Ca... 40 7.4
50gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 7.4
51dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.4
52ref|XM_624771.1| PREDICTED: Apis mellifera similar to CG32019-PA... 40 7.4
53gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana... 40 7.4
54gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, comp... 40 7.4
55dbj|AK116683.1| Ciona intestinalis cDNA, clone:ciad002h17, full ... 40 7.4
56emb|CR974580.6| Mouse DNA sequence from clone RP23-97P6 on chrom... 40 7.4
57gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, com... 40 7.4 
>ref|NM_188794.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 381

 Score =  228 bits (115), Expect = 2e-56
 Identities = 221/255 (86%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  tttggaggactaattcctaaaaagcc-ccgctcatctcaaaggaccatgagcgggcctat 72
           |||||||||||||| || ||||| || || |||||||| ||||| ||||| |||||||||
Sbjct: 127 tttggaggactaatgccaaaaaaaccaccactcatctcgaaggatcatgaacgggcctat 186

                                                                       
Query: 73  tttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaaacccaaa 132
           |||||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||||
Sbjct: 187 tttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaaacccaaa 246

                                                                       
Query: 133 ggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaacaacgttca 192
           ||||| || |||||||| ||||||||||||||||| || ||||||||||| || ||||| 
Sbjct: 247 ggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagcagcgttcc 306

                                                                       
Query: 193 aggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtcggaggac 252
           ||| |||  ||  ||| |||||||||||||||||||||||| || |||||  | ||||| 
Sbjct: 307 aggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgctgaggat 366

                          
Query: 253 atgaatatcaactga 267
           ||||| |||||||||
Sbjct: 367 atgaacatcaactga 381
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>dbj|AK061748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G04, full
           insert sequence
          Length = 948

 Score =  228 bits (115), Expect = 2e-56
 Identities = 221/255 (86%), Gaps = 1/255 (0%)
 Strand = Plus / Plus

                                                                       
Query: 14  tttggaggactaattcctaaaaagcc-ccgctcatctcaaaggaccatgagcgggcctat 72
           |||||||||||||| || ||||| || || |||||||| ||||| ||||| |||||||||
Sbjct: 422 tttggaggactaatgccaaaaaaaccaccactcatctcgaaggatcatgaacgggcctat 481

                                                                       
Query: 73  tttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaaacccaaa 132
           |||||||||||||| |||||||| |||||||||||||||||||| | ||| |||||||||
Sbjct: 482 tttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaaacccaaa 541

                                                                       
Query: 133 ggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaacaacgttca 192
           ||||| || |||||||| ||||||||||||||||| || ||||||||||| || ||||| 
Sbjct: 542 ggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagcagcgttcc 601

                                                                       
Query: 193 aggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtcggaggac 252
           ||| |||  ||  ||| |||||||||||||||||||||||| || |||||  | ||||| 
Sbjct: 602 aggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgctgaggat 661

                          
Query: 253 atgaatatcaactga 267
           ||||| |||||||||
Sbjct: 662 atgaacatcaactga 676
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>dbj|AK066274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061O18, full
            insert sequence
          Length = 2109

 Score =  216 bits (109), Expect = 6e-53
 Identities = 220/256 (85%), Gaps = 2/256 (0%)
 Strand = Plus / Plus

                                                                        
Query: 14   tttggaggactaattcc--taaaaagccccgctcatctcaaaggaccatgagcgggccta 71
            |||||||||||||| ||   ||||| | || |||||||| ||||| ||||| ||||||||
Sbjct: 1571 tttggaggactaatgccaaaaaaaaccaccactcatctcgaaggatcatgaacgggccta 1630

                                                                        
Query: 72   ttttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaaacccaa 131
            ||||||||||||||| |||||||| |||||||||||||||||||| | ||| ||||||||
Sbjct: 1631 ttttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaaacccaa 1690

                                                                        
Query: 132  aggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaacaacgttc 191
            |||||| || |||||||| ||||||||||||||||| || ||||||||||| || |||||
Sbjct: 1691 aggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagcagcgttc 1750

                                                                        
Query: 192  aaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtcggagga 251
             ||| |||  ||  ||| |||||||||||||||||||||||| || |||||  | |||||
Sbjct: 1751 caggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgctgagga 1810

                            
Query: 252  catgaatatcaactga 267
             ||||| |||||||||
Sbjct: 1811 tatgaacatcaactga 1826
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>gb|BT018355.1| Zea mays clone EL01T0403H09.c mRNA sequence
          Length = 738

 Score =  137 bits (69), Expect = 4e-29
 Identities = 209/255 (81%), Gaps = 13/255 (5%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttggaggactaattcctaaaaagccccg-ctcatctcaaaggaccatgagcgggccta 71
           ||||||||||||||| || ||||||||||  |||||||||||||| ||||||||||||||
Sbjct: 283 gtttggaggactaatgcccaaaaagcccccactcatctcaaaggatcatgagcgggccta 342

                                                                       
Query: 72  ttttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaaacccaa 131
            |||||||||||||| |||||||| || ||         |||||||||||| ||||| ||
Sbjct: 343 ctttgattctgctgactgggctctagggaa---------gcaaggtgttgccaaaccaaa 393

                                                                       
Query: 132 aggaccgctcgaggcactcaggccaaagttgcagcccacgcg---acaacagcaacaacg 188
           ||||||||| |||||||| ||||| ||| | ||||| || ||   |||||||||||||||
Sbjct: 394 aggaccgctggaggcacttaggcccaagcttcagccaacacgccaacaacagcaacaacg 453

                                                                       
Query: 189 ttcaaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtcgga 248
           | ||||| || | || ||||  || |||||||||||||| ||||| || |||||  | ||
Sbjct: 454 tgcaaggcgccctatttacacttcgtcagaaaacgaggacggagacggggctggtgctga 513

                          
Query: 249 ggacatgaatatcaa 263
           ||| ||||| |||||
Sbjct: 514 ggatatgaacatcaa 528
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>gb|AY108494.1| Zea mays PCO113418 mRNA sequence
          Length = 1007

 Score =  137 bits (69), Expect = 4e-29
 Identities = 209/255 (81%), Gaps = 13/255 (5%)
 Strand = Plus / Plus

                                                                       
Query: 13  gtttggaggactaattcctaaaaagccccg-ctcatctcaaaggaccatgagcgggccta 71
           ||||||||||||||| || ||||||||||  |||||||||||||| ||||||||||||||
Sbjct: 569 gtttggaggactaatgcccaaaaagcccccactcatctcaaaggatcatgagcgggccta 628

                                                                       
Query: 72  ttttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaaacccaa 131
            |||||||||||||| |||||||| || ||         |||||||||||| ||||| ||
Sbjct: 629 ctttgattctgctgactgggctctagggaa---------gcaaggtgttgccaaaccaaa 679

                                                                       
Query: 132 aggaccgctcgaggcactcaggccaaagttgcagcccacgcg---acaacagcaacaacg 188
           ||||||||| |||||||| ||||| ||| | ||||| || ||   |||||||||||||||
Sbjct: 680 aggaccgctggaggcacttaggcccaagcttcagccaacacgccaacaacagcaacaacg 739

                                                                       
Query: 189 ttcaaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtcgga 248
           | ||||| || | || ||||  || |||||||||||||| ||||| || |||||  | ||
Sbjct: 740 tgcaaggcgccctatttacacttcgtcagaaaacgaggacggagacggggctggtgctga 799

                          
Query: 249 ggacatgaatatcaa 263
           ||| ||||| |||||
Sbjct: 800 ggatatgaacatcaa 814
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>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence
          Length = 182756

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                          
Query: 101    agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 160
              |||||||||||||||| | ||| |||||||||||||| || |||||||| ||||||||||
Sbjct: 176274 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 176215

                   
Query: 161    tgcag 165
              |||||
Sbjct: 176214 tgcag 176210



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52     aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
              ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 176425 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 176375



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 163    cagcccacgcgacaacagcaacaacgttcaaggagctccatctacagctcatcagaaaac 222
              ||||| || ||||||||||| || ||||| ||| |||  ||  ||| |||||||||||||
Sbjct: 176070 cagccaacacgacaacagcagcagcgttccaggcgcttgattaacacctcatcagaaaac 176011

                  
Query: 223    gagg 226
              ||||
Sbjct: 176010 gagg 176007
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                           
Query: 101     agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 160
               |||||||||||||||| | ||| |||||||||||||| || |||||||| ||||||||||
Sbjct: 8212153 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 8212094

                    
Query: 161     tgcag 165
               |||||
Sbjct: 8212093 tgcag 8212089



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                  
Query: 52      aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
               ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 8212304 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 8212254



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 53       aggaccatgagcgggcctattttgattctgctgattgggctct 95
                |||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 27141068 aggatcatgatcgggcttactttgattctgctgattgggctct 27141110



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                        
Query: 53       aggaccatgagcgggcctattttgattctgctgattgggc 92
                ||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 11317114 aggaccatgagcgtgcctatttcgattccgccgattgggc 11317153



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                           
Query: 163     cagcccacgcgacaacagcaacaacgttcaaggagctccatctacagctcatcagaaaac 222
               ||||| || ||||||||||| || ||||| ||| |||  ||  ||| |||||||||||||
Sbjct: 8211949 cagccaacacgacaacagcagcagcgttccaggcgcttgattaacacctcatcagaaaac 8211890

                   
Query: 223     gagg 226
               ||||
Sbjct: 8211889 gagg 8211886
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>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0034C11
          Length = 139399

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                          
Query: 101    agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 160
              |||||||||||||||| | ||| |||||||||||||| || |||||||| ||||||||||
Sbjct: 129871 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 129812

                   
Query: 161    tgcag 165
              |||||
Sbjct: 129811 tgcag 129807



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 52     aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
              ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 130022 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 129972



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                          
Query: 163    cagcccacgcgacaacagcaacaacgttcaaggagctccatctacagctcatcagaaaac 222
              ||||| || ||||||||||| || ||||| ||| |||  ||  ||| |||||||||||||
Sbjct: 129667 cagccaacacgacaacagcagcagcgttccaggcgcttgattaacacctcatcagaaaac 129608

                  
Query: 223    gagg 226
              ||||
Sbjct: 129607 gagg 129604
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>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0434D08
          Length = 161266

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                        
Query: 101  agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 160
            |||||||||||||||| | ||| |||||||||||||| || |||||||| ||||||||||
Sbjct: 6084 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 6025

                 
Query: 161  tgcag 165
            |||||
Sbjct: 6024 tgcag 6020



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 52   aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
            ||||| ||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 6235 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 6185



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                        
Query: 163  cagcccacgcgacaacagcaacaacgttcaaggagctccatctacagctcatcagaaaac 222
            ||||| || ||||||||||| || ||||| ||| |||  ||  ||| |||||||||||||
Sbjct: 5880 cagccaacacgacaacagcagcagcgttccaggcgcttgattaacacctcatcagaaaac 5821

                
Query: 223  gagg 226
            ||||
Sbjct: 5820 gagg 5817
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>dbj|AK069846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034B10, full
           insert sequence
          Length = 983

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggctct 95
           ||||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 437 aaggatcatgatcgggcttactttgattctgctgattgggctct 480
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>dbj|AK059427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E11, full
           insert sequence
          Length = 871

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggctct 95
           ||||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 325 aaggatcatgatcgggcttactttgattctgctgattgggctct 368
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>gb|BT016477.1| Zea mays clone Contig310 mRNA sequence
          Length = 1237

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| ||||| || || || ||||||||||||||||||||||| ||||||
Sbjct: 543 aaggatcatgaacgtgcttactttgattctgctgattgggctctaggaaag 593
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>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003E08
          Length = 135014

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 53    aggaccatgagcgggcctattttgattctgctgattgggctct 95
             |||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 48746 aggatcatgatcgggcttactttgattctgctgattgggctct 48788
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>gb|AY106845.1| Zea mays PCO147512 mRNA sequence
          Length = 1223

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| ||||| || || || ||||||||||||||||||||||| ||||||
Sbjct: 557 aaggatcatgaacgtgcttactttgattctgctgattgggctctaggaaag 607
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>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE
          Length = 243542

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 53     aggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
              |||| ||||| || || |||||||||||||||||||||||| | ||||||
Sbjct: 203391 aggatcatgaacgtgcttattttgattctgctgattgggctttgggaaag 203342
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>dbj|AK058475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C02, full
           insert sequence
          Length = 729

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggct 93
           ||||| |||||||| || || |||||||||||||||||||||
Sbjct: 107 aaggatcatgagcgagcttactttgattctgctgattgggct 148
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>ref|NM_189297.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 423

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggc 92
           |||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 124 aaggaccatgagcgtgcctatttcgattccgccgattgggc 164
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>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11,
             complete sequence
          Length = 204649

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 53    aggaccatgagcgggcctattttgattctgctgattgggct 93
             |||| |||||||| || || |||||||||||||||||||||
Sbjct: 66463 aggatcatgagcgagcttactttgattctgctgattgggct 66423
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>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence
          Length = 116601

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 70    tattttgattctgctgattgggctctcggaaag 102
             |||||||||||||||||||||||| | ||||||
Sbjct: 35534 tattttgattctgctgattgggctttgggaaag 35566
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                         
Query: 53       aggaccatgagcgggcctattttgattctgctgattgggct 93
                |||| |||||||| || || |||||||||||||||||||||
Sbjct: 27986298 aggatcatgagcgagcttactttgattctgctgattgggct 27986258
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>dbj|AK062385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-C01, full
           insert sequence
          Length = 612

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggc 92
           |||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 267 aaggaccatgagcgtgcctatttcgattccgccgattgggc 307
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>gb|AF061157.1|AF061157 Vernicia fordii negatively light-regulated protein mRNA, complete
           cds
          Length = 985

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 52  aaggaccatgagcgggcctattttgattctgctgattgggc 92
           ||||| |||||||| || | |||||||||||||||||||||
Sbjct: 346 aaggatcatgagcgtgcattttttgattctgctgattgggc 386
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>ref|NM_125809.3| Arabidopsis thaliana unknown protein AT5G64130 transcript variant
           AT5G64130.1 mRNA, complete cds
          Length = 650

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatctcaaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| || ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 288 ctcatttccaaggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 347
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>ref|NM_001037057.1| Arabidopsis thaliana unknown protein AT5G64130 transcript variant
           AT5G64130.2 mRNA, complete cds
          Length = 707

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatctcaaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| || ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 344 ctcatttccaaggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 403
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>gb|AY097399.1| Arabidopsis thaliana AT5g64130/MHJ24_11 mRNA, complete cds
          Length = 348

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatctcaaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| || ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 133 ctcatttccaaggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 192
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>gb|AY058135.1| Arabidopsis thaliana AT5g64130/MHJ24_11 mRNA, complete cds
          Length = 618

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatctcaaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| || ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 254 ctcatttccaaggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 313
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>emb|BX834062.1|CNS0A26V Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL93ZA07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 574

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatctcaaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| || ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 238 ctcatttccaaggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 297
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>gb|AY084225.1| Arabidopsis thaliana clone 10032 mRNA, complete sequence
          Length = 650

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                       
Query: 43  ctcatctcaaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
           ||||| || ||||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 288 ctcatttccaaggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 347
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>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0552C05
          Length = 136586

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 53    aggaccatgagcgggcctattttgattctgctgattgggc 92
             ||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 30699 aggaccatgagcgtgcctatttcgattccgccgattgggc 30738
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>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0475H04
          Length = 143337

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 53     aggaccatgagcgggcctattttgattctgctgattgggc 92
              ||||||||||||| |||||||| ||||| || ||||||||
Sbjct: 104519 aggaccatgagcgtgcctatttcgattccgccgattgggc 104558
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>dbj|AK062656.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E12, full
           insert sequence
          Length = 627

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 49  tcaaaggaccatgagcgggcctattttgattc 80
           ||||||||||||||||| ||||| ||||||||
Sbjct: 184 tcaaaggaccatgagcgcgcctactttgattc 215
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>dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHJ24
          Length = 48622

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 53    aggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 102
             |||| |||||||| || || ||||| || |||||||||||||| ||||||
Sbjct: 38437 aggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 38388
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>gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete sequence
          Length = 192157

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 218   aaaacgaggatggagatggcgctgg 242
             ||||||||||||||||||| |||||
Sbjct: 93801 aaaacgaggatggagatggagctgg 93825
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>ref|XM_633933.1| Dictyostelium discoideum hypothetical protein (DDB0185575), partial
           mRNA
          Length = 318

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 72  ttttgattctgctgattgggc 92
           |||||||||||||||||||||
Sbjct: 204 ttttgattctgctgattgggc 224
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 72      ttttgattctgctgattgggc 92
               |||||||||||||||||||||
Sbjct: 6036176 ttttgattctgctgattgggc 6036156
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>emb|AJ223492.1|TAIMA1 Triticum aestivum mRNA for monomeric alpha-amylase inhibitor
          (WAI-0.28)
          Length = 689

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                               
Query: 52 aaggaccatgagcgggcctattttgattctgctgatt 88
          |||||||||||||| || |  ||||||||||||||||
Sbjct: 17 aaggaccatgagcgagcttgctttgattctgctgatt 53
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>gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
              BACR33D17, complete sequence
          Length = 156753

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 218    aaaacgaggatggagatggcgctgg 242
              ||||||||||||||||||| |||||
Sbjct: 126893 aaaacgaggatggagatggagctgg 126869
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>gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, region 57B2-B3, BAC clone
             BACR04I07, complete sequence
          Length = 123647

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 218   aaaacgaggatggagatggcgctgg 242
             ||||||||||||||||||| |||||
Sbjct: 93787 aaaacgaggatggagatggagctgg 93763
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>gb|AE003791.5| Drosophila melanogaster chromosome 2R, section 59 of 73 of the complete
              sequence
          Length = 263535

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 218    aaaacgaggatggagatggcgctgg 242
              ||||||||||||||||||| |||||
Sbjct: 169735 aaaacgaggatggagatggagctgg 169711
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>gb|BT017304.1| Zea mays clone EL01N0316E01.c mRNA sequence
          Length = 937

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 52  aaggaccatgagcgggcctattttgattctgc 83
           |||||||| ||||| ||||| |||||||||||
Sbjct: 284 aaggaccacgagcgcgcctactttgattctgc 315
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>gb|AY430193.1| Amphitmetus transversus clone MS 91 microsatellite sequence
          Length = 716

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 399 ataagaagaaaagagacgtt 418
           ||||||||||||||||||||
Sbjct: 690 ataagaagaaaagagacgtt 709
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 53       aggaccatgagcgggcctattttgattc 80
                ||||||||||||| ||||| ||||||||
Sbjct: 10776612 aggaccatgagcgcgcctactttgattc 10776585
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>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08,
             from chromosome 3, complete sequence
          Length = 108833

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 53    aggaccatgagcgggcctattttgattc 80
             ||||||||||||| ||||| ||||||||
Sbjct: 78275 aggaccatgagcgcgcctactttgattc 78302
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>gb|AC104789.4| Homo sapiens BAC clone RP11-138B1 from 7, complete sequence
          Length = 142048

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 506   ttgtccaatttgtgaatgga 525
             ||||||||||||||||||||
Sbjct: 94855 ttgtccaatttgtgaatgga 94874
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>gb|AC104897.7| Mus musculus chromosome 12, clone RP23-300E12, complete sequence
          Length = 194600

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    tgaagaagcagcttgctttc 339
              ||||||||||||||||||||
Sbjct: 138113 tgaagaagcagcttgctttc 138132
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     tcatcagaaaacgaggatgg 230
               ||||||||||||||||||||
Sbjct: 1970855 tcatcagaaaacgaggatgg 1970836
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>gb|AC138511.2| Homo sapiens chromosome 16 clone RP11-22F7, complete sequence
          Length = 149037

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 505   attgtccaatttgtgaatggatat 528
             |||||||| |||||||||||||||
Sbjct: 39210 attgtccattttgtgaatggatat 39187
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>gb|AC159822.2| Mus musculus BAC clone RP23-152C21 from chromosome 12, complete sequence
          Length = 198679

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    tgttgcaaaacccaaaggac 136
              ||||||||||||||||||||
Sbjct: 153833 tgttgcaaaacccaaaggac 153814
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>gb|AC025265.21| Homo sapiens 12 BAC RP11-341G23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 180064

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   catcagaaaacgaggatgga 231
             ||||||||||||||||||||
Sbjct: 91441 catcagaaaacgaggatgga 91460
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 171     gcgacaacagcaacaacgtt 190
               ||||||||||||||||||||
Sbjct: 1925971 gcgacaacagcaacaacgtt 1925952
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 53       aggaccatgagcgggcctattttgattc 80
                ||||||||||||| ||||| ||||||||
Sbjct: 10774713 aggaccatgagcgcgcctactttgattc 10774686
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>ref|XM_624771.1| PREDICTED: Apis mellifera similar to CG32019-PA, isoform A
            (LOC409821), mRNA
          Length = 15896

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 120  tgcaaaacccaaaggaccgctcga 143
            |||||||||| |||||||||||||
Sbjct: 2013 tgcaaaacccgaaggaccgctcga 2036
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>gb|AC007915.3|AC007915 Genomic sequence for Arabidopsis thaliana BAC F27F5 from chromosome I,
              complete sequence
          Length = 137336

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 518    tgaatggatatctctgtttt 537
              ||||||||||||||||||||
Sbjct: 124761 tgaatggatatctctgtttt 124780
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>gb|AC136433.3| Homo sapiens chromosome 16 clone RP11-21C14, complete sequence
          Length = 164765

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 505    attgtccaatttgtgaatggatat 528
              |||||||| |||||||||||||||
Sbjct: 111008 attgtccattttgtgaatggatat 111031
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>dbj|AK116683.1| Ciona intestinalis cDNA, clone:ciad002h17, full insert sequence
          Length = 4146

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 171  gcgacaacagcaacaacgtt 190
            ||||||||||||||||||||
Sbjct: 2017 gcgacaacagcaacaacgtt 2036



 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 171  gcgacaacagcaacaacgtt 190
            ||||||||||||||||||||
Sbjct: 1624 gcgacaacagcaacaacgtt 1643
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>emb|CR974580.6| Mouse DNA sequence from clone RP23-97P6 on chromosome 12, complete
             sequence
          Length = 197896

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   tgaagaagcagcttgctttc 339
             ||||||||||||||||||||
Sbjct: 80795 tgaagaagcagcttgctttc 80776
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>gb|AC136625.2| Homo sapiens chromosome 16 clone RP11-554I17, complete sequence
          Length = 184294

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 505    attgtccaatttgtgaatggatat 528
              |||||||| |||||||||||||||
Sbjct: 113332 attgtccattttgtgaatggatat 113309


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,456,804
Number of Sequences: 3902068
Number of extensions: 4456804
Number of successful extensions: 104495
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 104180
Number of HSP's gapped (non-prelim): 309
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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