ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14m02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1156 bits (583), Expect = 0.0 Identities = 588/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 120050 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 119991 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119990 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 119931 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119930 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 119871 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119870 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 119811 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119810 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 119751 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119750 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 119691 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119690 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 119631 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119630 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 119571 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119570 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 119511 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119510 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 119461 Score = 1156 bits (583), Expect = 0.0 Identities = 588/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94844 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 94903 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94904 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 94963 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94964 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95023 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95024 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 95083 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95084 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 95143 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95144 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 95203 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95204 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 95263 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95264 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 95323 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95324 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 95383 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95384 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 95433
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 961 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 902 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 901 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 842 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 841 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 782 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 722 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 662 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 661 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 602 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 601 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 542 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 482 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 422 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 372
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44875 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 44816 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 44815 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 44756 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44755 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 44696 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44695 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 44636 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44635 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 44576 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 44575 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 44516 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44515 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 44456 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44455 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 44396 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44395 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 44336 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44335 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 44286 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20243 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 20302 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20303 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 20362 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20363 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 20422 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20423 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 20482 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20483 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 20542 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20543 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 20602 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20603 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 20662 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20663 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 20722 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20723 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 20782 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20783 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 20832
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1504 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 1445 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1444 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 1385 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 1325 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1324 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 1265 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 1205 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1204 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 1145 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 1085 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 1025 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 965 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 964 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 915
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123714 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 123655 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123654 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 123595 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123594 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 123535 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123534 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 123475 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123474 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 123415 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123414 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 123355 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123354 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 123295 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123294 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 123235 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123234 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 123175 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123174 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 123125 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99123 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 99182 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99183 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 99242 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99243 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 99302 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99303 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 99362 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99363 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 99422 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99423 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 99482 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99483 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 99542 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99543 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 99602 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99603 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 99662 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99663 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 99712
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124431 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 124372 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 124371 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 124312 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124311 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 124252 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124251 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 124192 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124191 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 124132 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 124131 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 124072 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124071 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 124012 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124011 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 123952 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123951 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 123892 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123891 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 123842 Score = 1148 bits (579), Expect = 0.0 Identities = 587/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99800 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 99859 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 99860 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 99919 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99920 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 99979 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99980 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 100039 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100040 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 100099 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 100100 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 100159 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100160 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 100219 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100220 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 100279 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100280 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 100339 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100340 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 100389
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118831 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 118772 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118771 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 118712 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118711 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 118652 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118651 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 118592 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118591 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 118532 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118531 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 118472 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118471 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 118412 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118411 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 118352 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118351 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 118292 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118291 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 118242
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 119856 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119855 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 119796 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119795 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 119736 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 119676 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 119616 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119615 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 119556 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119555 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 119496 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 119436 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 119376 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119375 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 119326 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 95300 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95301 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 95360 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95361 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95420 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95421 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 95480 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95481 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 95540 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95541 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 95600 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95601 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 95660 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95661 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 95720 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95721 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 95780 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95781 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 95830
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 119856 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119855 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 119796 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119795 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 119736 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119735 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 119676 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119675 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 119616 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119615 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 119556 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119555 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 119496 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119495 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 119436 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119435 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 119376 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119375 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 119326 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 95300 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95301 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 95360 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95361 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95420 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95421 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 95480 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95481 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 95540 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95541 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 95600 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95601 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 95660 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95661 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 95720 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95721 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 95780 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95781 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 95830
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119864 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 119805 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119804 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 119745 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119744 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 119685 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119684 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 119625 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119624 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 119565 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119564 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 119505 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119504 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 119445 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119444 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 119385 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119384 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 119325 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119324 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 119275 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95186 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 95245 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95246 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 95305 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95306 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95365 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95366 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 95425 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95426 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 95485 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95486 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 95545 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95546 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 95605 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95606 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 95665 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95666 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 95725 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95726 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 95775
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31507819 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 31507878 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31507879 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 31507938 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507939 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 31507998 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507999 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 31508058 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508059 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 31508118 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31508119 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 31508178 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508179 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 31508238 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508239 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 31508298 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508299 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 31508358 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508359 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 31508408
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84777 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 84718 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 84717 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 84658 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84657 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 84598 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84597 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 84538 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84537 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 84478 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 84477 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 84418 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84417 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 84358 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84357 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 84298 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84297 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 84238 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84237 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 84188
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119884 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 119825 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119824 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 119765 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119764 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 119705 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119704 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 119645 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119644 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 119585 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119584 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 119525 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119524 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 119465 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119464 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 119405 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119404 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 119345 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119344 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 119295 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95234 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 95293 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95294 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 95353 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95354 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95413 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95414 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 95473 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95474 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 95533 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95534 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 95593 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95594 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 95653 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95654 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 95713 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95714 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 95773 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95774 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 95823
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122283 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 122342 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122343 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 122402 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122403 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 122462 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122463 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 122522 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122523 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 122582 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 122583 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 122642 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122643 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 122702 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122703 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 122762 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122763 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 122822 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122823 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 122872 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14008 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 14067 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14068 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 14127 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14128 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 14187 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14188 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 14247 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14248 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 14307 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 14308 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 14367 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14368 cgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggcta 14427 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14428 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 14487 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14488 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 14547 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14548 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 14597
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58603 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 58544 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 58543 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 58484 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58483 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 58424 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58423 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 58364 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58363 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 58304 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 58303 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 58244 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58243 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 58184 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58183 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 58124 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58123 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 58064 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58063 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 58014
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268168 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 9268227 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9268228 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 9268287 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268288 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 9268347 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268348 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 9268407 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268408 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 9268467 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9268468 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 9268527 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268528 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 9268587 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268588 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 9268647 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268648 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 9268707 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268708 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 9268757 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9227668 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 9227727 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9227728 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 9227787 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227788 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 9227847 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227848 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 9227907 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227908 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 9227967 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9227968 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 9228027 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228028 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 9228087 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228088 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 9228147 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228148 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 9228207 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228208 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 9228257 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164257 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 9164316 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9164317 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 9164376 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164377 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 9164436 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164437 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 9164496 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164497 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 9164556 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9164557 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 9164616 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164617 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 9164676 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164677 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 9164736 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164737 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 9164796 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164797 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 9164846 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056082 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 9056141 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9056142 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 9056201 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056202 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 9056261 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056262 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 9056321 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056322 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 9056381 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9056382 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 9056441 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9056442 cgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggcta 9056501 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056502 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 9056561 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056562 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 9056621 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056622 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 9056671 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 496 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938153 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 19938212 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19938213 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 19938272 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938273 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 19938332 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938333 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 19938392 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938393 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 19938452 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19938453 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 19938512 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938513 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 19938572 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938573 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 19938632 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938633 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 19938692 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938693 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 19938742 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10277278 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 10277219 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10277218 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 10277159 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277158 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 10277099 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277098 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 10277039 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277038 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 10276979 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10276978 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 10276919 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276918 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 10276859 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276858 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 10276799 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276798 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 10276739 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276738 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 10276689 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387020 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 10387079 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10387080 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 10387139 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387140 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 10387199 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387200 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 10387259 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387260 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 10387319 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10387320 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 10387379 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387380 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 10387439 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10387440 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccccc 10387499 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387500 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 10387559 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387560 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 10387609 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 454 agtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 ttgtgctgctaggcgaagcggttgagtgc 307 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598335 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 31598394 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31598395 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 31598454 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598455 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 31598514 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598515 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 31598574 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598575 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 31598634 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 31598635 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 31598694 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598695 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 31598754 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598755 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 31598814 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598815 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 31598874 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598875 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 31598924
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33525651 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 33525710 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 33525711 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 33525770 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525771 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 33525830 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525831 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 33525890 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525891 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 33525950 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 33525951 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 33526010 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526011 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 33526070 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526071 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 33526130 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526131 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 33526190 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526191 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 33526240 Score = 258 bits (130), Expect = 2e-65 Identities = 136/138 (98%) Strand = Plus / Minus Query: 458 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 517 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 518 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 577 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 578 gccggcgactcataggca 595 |||||||||||||||||| Sbjct: 16677981 gccggcgactcataggca 16677964 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 472 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 531 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 532 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 581 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 503 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttc 62 |||||| ||||| ||||||||||||||||||||| Sbjct: 19455163 acgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47890 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 47831 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 47830 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 47771 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47770 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 47711 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47710 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 47651 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47650 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 47591 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 47590 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 47531 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47530 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 47471 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47470 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 47411 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47410 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 47351 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47350 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 47301
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 70848 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 70907 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 70908 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 70967 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70968 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 71027 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71028 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 71087 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71088 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 71147 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 71148 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 71207 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71208 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 71267 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71268 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 71327 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71328 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 71387 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71388 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 71437 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 139 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 199 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 319 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 320 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 379 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 439 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 499 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 559 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 609
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 76 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 77 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 136 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 196 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 197 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 256 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 316 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 317 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 376 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 436 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 496 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 556 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 606
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949429 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 19949488 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19949489 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 19949548 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949549 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 19949608 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949609 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 19949668 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949669 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 19949728 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 19949729 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 19949788 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949789 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 19949848 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949849 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 19949908 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949909 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 19949968 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949969 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 19950018 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10283317 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 10283258 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10283257 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 10283198 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283197 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 10283138 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283137 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 10283078 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283077 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 10283018 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10283017 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 10282958 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282957 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 10282898 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282897 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 10282838 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282837 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 10282778 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282777 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 10282728 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393059 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 10393118 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10393119 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 10393178 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393179 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 10393238 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393239 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 10393298 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393299 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 10393358 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 10393359 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 10393418 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393419 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 10393478 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 10393479 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccccc 10393538 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393539 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 10393598 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393599 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 10393648 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 279 ttgtgctgctaggcgaagcggttgagtgc 307 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119858 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 119799 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119798 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 119739 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119738 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 119679 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119678 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 119619 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119618 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 119559 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 119558 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 119499 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119498 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 119439 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119438 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 119379 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119378 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 119319 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119318 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 119269 Score = 1140 bits (575), Expect = 0.0 Identities = 586/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95181 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 95240 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95241 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 95300 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95301 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95360 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95361 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 95420 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95421 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 95480 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 95481 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 95540 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95541 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 95600 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95601 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 95660 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95661 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 95720 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95721 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 95770
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 140816 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 140875 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 140876 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 140935 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140936 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 140995 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140996 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 141055 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141056 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 141115 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141116 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 141175 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141176 cgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggcta 141235 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141236 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 141295 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141296 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 141355 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141356 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 141405
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93412 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 93471 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 93472 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 93531 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93532 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 93591 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93592 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 93651 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93652 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 93711 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 93712 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 93771 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93772 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 93831 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 93832 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccccc 93891 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93892 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 93951 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93952 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 94001
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1132 bits (571), Expect = 0.0 Identities = 585/590 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 27476 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 27535 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27536 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 27595 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27596 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 27655 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27656 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 27715 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27716 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 27775 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 27776 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 27835 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27836 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 27895 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 27896 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccccc 27955 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27956 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 28015 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28016 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 28065
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1124 bits (567), Expect = 0.0 Identities = 584/590 (98%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9242113 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 9242054 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9242053 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 9241994 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241993 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 9241934 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241933 aaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccg 9241874 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241873 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 9241814 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9241813 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 9241754 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241753 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 9241694 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241693 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 9241634 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241633 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 9241574 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 9241573 tgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggca 9241524 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 161 actgaaacatcttagtagccagaggaaaagaaag 194 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1124 bits (567), Expect = 0.0 Identities = 584/590 (98%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 53326 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 53267 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 53266 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 53207 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53206 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 53147 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 53146 aaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaaccg 53087 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53086 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 53027 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 53026 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 52967 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52966 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 52907 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52906 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 52847 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52846 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 52787 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 52786 tgatctctgaccgcgtgcctgttgaagaatgagctggcgactcataggca 52737
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1090 bits (550), Expect = 0.0 Identities = 562/566 (99%) Strand = Plus / Plus Query: 30 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 89 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 90 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 149 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 150 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 210 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 270 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 329 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 330 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 389 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 390 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 450 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 510 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 569 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 570 aagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcataggca 566
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgg 64 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 123654 ggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgg 123595 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 123594 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 123535 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123534 gccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 123475 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123474 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 123415 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123414 gtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgag 123355 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 |||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| Sbjct: 123354 tgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgac 123296 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123295 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 123236 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123235 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 123176 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123175 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 123116 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123115 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 123065 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgg 64 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 99083 ggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgg 99142 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 99143 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 99202 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99203 gccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 99262 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99263 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 99322 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99323 gtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgag 99382 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 |||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| Sbjct: 99383 tgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgac 99441 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99442 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 99501 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99502 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 99561 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99562 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 99621 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99622 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 99672
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgg 64 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 5436 ggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgg 5495 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5496 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 5555 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5556 gccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 5615 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5616 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 5675 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5676 gtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgag 5735 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 |||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| Sbjct: 5736 tgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgac 5794 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5795 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 5854 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5855 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 5914 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5915 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 5974 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5975 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 6025
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1086 bits (548), Expect = 0.0 Identities = 582/591 (98%), Gaps = 2/591 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaag-ggcgtagcaagcgacgaaatgcttcgg 64 ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 24 ggtggatacctaggcacccagagacgaggaagaggcgtagcaagcgacgaaatgcttcgg 83 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 84 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcct 143 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144 gccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 203 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 263 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 264 gtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttgag 323 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 |||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| Sbjct: 324 tgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctgac 382 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 442 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 502 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 562 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 613
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1007 bits (508), Expect = 0.0 Identities = 514/516 (99%) Strand = Plus / Plus Query: 80 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 139 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 140 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 200 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 260 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 320 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 379 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 380 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 440 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 500 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 560 gtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcataggca 516
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 991 bits (500), Expect = 0.0 Identities = 509/512 (99%) Strand = Plus / Plus Query: 84 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 143 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 263 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 264 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 324 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 383 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 384 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 444 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 504 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 564 ctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcataggca 512
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 969 bits (489), Expect = 0.0 Identities = 566/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139564 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 139505 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 139504 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 139446 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139445 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 139386 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139385 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 139326 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 139325 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 139266 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 139265 actgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacc 139206 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139205 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 139146 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139145 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 139086 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 139085 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatt 139029 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139028 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 138979 Score = 969 bits (489), Expect = 0.0 Identities = 566/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110381 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 110440 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 110441 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 110499 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110500 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 110559 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110560 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 110619 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 110620 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 110679 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 110680 actgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctgacc 110739 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110740 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 110799 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110800 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 110859 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 110860 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatt 110916 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110917 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 110966
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 969 bits (489), Expect = 0.0 Identities = 566/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127842 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 127783 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 127782 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 127724 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127723 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 127664 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127663 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccg 127604 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 127603 tgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagt 127544 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||| Sbjct: 127543 gctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacc 127484 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127483 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 127424 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127423 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 127364 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| | Sbjct: 127363 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatg 127307 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127306 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 127257 Score = 969 bits (489), Expect = 0.0 Identities = 566/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107080 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 107139 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 107140 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 107198 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107199 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 107258 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107259 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccg 107318 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 107319 tgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtggagt 107378 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||| ||||||||||||| ||||||||| Sbjct: 107379 gctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctgacc 107438 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107439 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 107498 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107499 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 107558 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| | Sbjct: 107559 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatg 107615 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107616 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 107665
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 969 bits (489), Expect = 0.0 Identities = 566/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134201 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 134142 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 134141 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 134083 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134082 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 134023 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134022 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 133963 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 133962 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaat 133903 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 133902 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 133843 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133842 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 133783 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133782 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 133723 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| | Sbjct: 133722 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatg 133666 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133665 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 133616 Score = 969 bits (489), Expect = 0.0 Identities = 566/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103770 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 103829 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 103830 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 103888 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103889 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 103948 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103949 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 104008 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 104009 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggaat 104068 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 104069 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 104128 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104129 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 104188 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104189 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 104248 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| | Sbjct: 104249 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatg 104305 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104306 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 104355
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 954 bits (481), Expect = 0.0 Identities = 564/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142086 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 142027 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| || Sbjct: 142026 gagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tg 141968 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141967 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 141908 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141907 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 141848 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 141847 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagt 141788 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 141787 actgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacc 141728 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141727 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggcta 141668 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141667 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 141608 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 141607 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatt 141551 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141550 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 141501 Score = 954 bits (481), Expect = 0.0 Identities = 564/590 (95%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111571 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 111630 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| || Sbjct: 111631 gagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc-tg 111689 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111690 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 111749 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111750 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 111809 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 111810 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttgagt 111869 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 111870 actgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctgacc 111929 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111930 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggcta 111989 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111990 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 112049 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 112050 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaatt 112106 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112107 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 112156
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 954 bits (481), Expect = 0.0 Identities = 492/496 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 21 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 81 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 260 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 320 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 321 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacc 380 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 440 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 500 Query: 486 agtgggtagtgaaata 501 |||||||||||||||| Sbjct: 501 agtgggtagtgaaata 516
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 944 bits (476), Expect = 0.0 Identities = 563/590 (95%), Gaps = 8/590 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 134959 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 134900 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 134899 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 134841 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134840 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 134781 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134780 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 134721 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 134720 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagt 134661 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||| Sbjct: 134660 gctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacc 134601 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134600 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 134541 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134540 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 134481 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 134480 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa-- 134426 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134425 --atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 134378 Score = 944 bits (476), Expect = 0.0 Identities = 563/590 (95%), Gaps = 8/590 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 105323 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 105382 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 105383 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 105441 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105442 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 105501 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105502 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 105561 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 105562 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagt 105621 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||||| |||||||||||||||||||||||||||||| | ||| ||| Sbjct: 105622 gctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaacc 105681 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105682 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 105741 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105742 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 105801 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| |||||||||||||||||||||| ||| Sbjct: 105802 atcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggaggagaa-- 105856 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105857 --atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 105904
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 942 bits (475), Expect = 0.0 Identities = 478/479 (99%) Strand = Plus / Plus Query: 117 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 176 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 177 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 236 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 237 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 296 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 297 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 356 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 357 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 417 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 477 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 536 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 537 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 479
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 940 bits (474), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 136569 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 136510 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 136509 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tg 136451 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136450 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 136391 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136390 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 136331 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 136330 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 136271 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 136270 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 136211 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136210 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 136151 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 136150 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 136091 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 136090 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccag 136034 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136033 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135986 Score = 940 bits (474), Expect = 0.0 Identities = 563/590 (95%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 105856 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 105915 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 105916 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc-tg 105974 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105975 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106034 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106035 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106094 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 106095 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 106154 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 106155 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 106214 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106215 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 106274 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 106275 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 106334 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || Sbjct: 106335 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccag 106391 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106392 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106439
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 922 bits (465), Expect = 0.0 Identities = 561/590 (95%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 132753 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 132694 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 132693 gagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tg 132635 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132634 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 132575 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132574 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 132515 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 132514 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaat 132455 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132454 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacc 132395 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132394 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 132335 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 132334 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 132275 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 132274 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 132218 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132217 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 132169 Score = 922 bits (465), Expect = 0.0 Identities = 561/590 (95%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 104125 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 104184 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 104185 gagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tg 104243 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104244 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 104303 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104304 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 104363 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 104364 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaat 104423 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104424 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacc 104483 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104484 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 104543 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104544 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 104603 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 104604 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 104660 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104661 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 104709
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 922 bits (465), Expect = 0.0 Identities = 561/590 (95%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 132976 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 132917 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 132916 gagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tg 132858 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132857 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 132798 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132797 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 132738 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| Sbjct: 132737 tgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagt 132678 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 132677 gccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacc 132618 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132617 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 132558 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 132557 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 132498 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132497 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccc 132442 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132441 tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 132392 Score = 922 bits (465), Expect = 0.0 Identities = 561/590 (95%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 103788 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 103847 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 103848 gagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tg 103906 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103907 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 103966 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103967 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 104026 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| Sbjct: 104027 tgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtggagt 104086 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 104087 gccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacc 104146 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104147 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 104206 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104207 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 104266 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104267 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccc 104322 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 104372
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 922 bits (465), Expect = 0.0 Identities = 561/590 (95%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 132746 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 132687 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 132686 gagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tg 132628 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132627 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 132568 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132567 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 132508 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 132507 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaat 132448 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132447 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacc 132388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132387 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 132328 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 132327 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 132268 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 132267 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 132211 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132210 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 132162 Score = 922 bits (465), Expect = 0.0 Identities = 561/590 (95%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 104123 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 104182 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 104183 gagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tg 104241 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104242 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 104301 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104302 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 104361 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 104362 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaat 104421 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104422 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacc 104481 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 104541 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 104542 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 104601 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 104602 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 104658 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104659 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 104707
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 914 bits (461), Expect = 0.0 Identities = 560/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 131645 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 131586 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 131585 gagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tg 131527 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131526 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 131467 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131466 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 131407 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 131406 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaat 131347 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131346 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacc 131287 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131286 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 131227 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131226 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 131167 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 131166 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 131110 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131109 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 131061 Score = 914 bits (461), Expect = 0.0 Identities = 560/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 102990 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 103049 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 103050 gagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc-tg 103108 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103109 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 103168 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103169 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 103228 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 103229 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtagaat 103288 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 103289 gctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacc 103348 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103349 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 103408 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 103409 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 103468 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 103469 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 103525 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103526 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 103574
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 914 bits (461), Expect = 0.0 Identities = 560/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 133937 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 133878 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 133877 gagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tg 133819 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133818 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 133759 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133758 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 133699 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||| Sbjct: 133698 tgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagt 133639 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 133638 gccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacc 133579 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133578 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 133519 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 133518 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 133459 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133458 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccc 133403 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133402 tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 133353 Score = 914 bits (461), Expect = 0.0 Identities = 560/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 104712 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 104771 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 104772 gagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tg 104830 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104831 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 104890 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104891 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 104950 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||| Sbjct: 104951 tgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagt 105010 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 105011 gccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacc 105070 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105071 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 105130 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 105131 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 105190 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105191 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccc 105246 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105247 tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 105296
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 906 bits (457), Expect = 0.0 Identities = 559/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 140338 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 140279 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 140278 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 140220 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140219 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 140160 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140159 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 140100 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 140099 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaat 140040 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 140039 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 139980 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139979 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 139920 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139919 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 139860 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | | Sbjct: 139859 atcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acg 139804 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139803 ggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 139754 Score = 906 bits (457), Expect = 0.0 Identities = 559/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 109722 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 109781 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 109782 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 109840 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109841 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 109900 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109901 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 109960 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 109961 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcggaat 110020 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 110021 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 110080 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110081 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 110140 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110141 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 110200 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | || ||||||||||||||||| | | | Sbjct: 110201 atcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-acg 110256 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110257 ggggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 110306
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 906 bits (457), Expect = 0.0 Identities = 559/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 21 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 81 gagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc-tg 139 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 199 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||| | |||||| |||||||||||||||||||| |||| Sbjct: 260 tgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtggagt 319 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||| Sbjct: 320 gccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctgacc 379 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 439 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 440 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 499 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 500 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-ccc 555 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 tgggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 605
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 906 bits (457), Expect = 0.0 Identities = 559/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 90 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 329 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 509 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcccg 565 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 566 -gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 614
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 136278 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 136219 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 136218 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 136160 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136159 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 136100 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136099 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 136040 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136039 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 135980 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135979 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 135920 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135919 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135860 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135859 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135800 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135799 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135743 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135742 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135694 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 106352 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 106411 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 106412 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 106470 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106471 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106530 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106531 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106590 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106591 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 106650 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106651 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 106710 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106711 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106770 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106771 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106830 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106831 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106887 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106888 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106936
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 136916 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 136857 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 136856 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 136798 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136797 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 136738 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136737 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 136678 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 136677 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 136618 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 136617 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 136558 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136557 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 136498 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 136497 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 136438 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 136437 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 136381 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136380 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 136332 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 106641 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 106700 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 106701 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 106759 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106760 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106819 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106820 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106879 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 106880 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 106939 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 106940 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 106999 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107000 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 107059 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107060 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 107119 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 107120 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 107176 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107177 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 107225
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 1546 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 1605 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 1606 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 1664 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1665 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 1724 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1725 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 1784 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 1785 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 1844 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1845 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 1904 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1905 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 1964 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1965 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 2024 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 2025 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 2081 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2082 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 2130
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 135524 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 135465 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 135464 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 135406 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135405 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135346 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135345 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135286 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135285 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 135226 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 135225 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 135166 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135106 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135105 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135046 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135045 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 134989 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134988 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 134940 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 105512 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 105571 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 105572 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 105630 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105631 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 105690 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105691 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 105750 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105751 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 105810 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 105811 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 105870 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105871 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105930 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105931 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 105990 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 105991 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106047 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106048 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106096
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 135659 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 135600 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 135599 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 135541 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135481 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135480 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135421 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135420 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 135361 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 135360 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 135301 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135300 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135241 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135240 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135181 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135180 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135124 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135123 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135075 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 105684 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 105743 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 105744 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 105802 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105803 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 105862 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105863 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 105922 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105923 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 105982 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 105983 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 106042 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106043 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106102 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106103 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106162 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106163 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106219 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106268
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 135657 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 135598 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 135597 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 135539 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135538 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135479 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135478 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135419 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135418 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 135359 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 135358 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 135299 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135298 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135239 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135238 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135179 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135178 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135122 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135121 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135073 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 105681 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 105740 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 105741 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 105799 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105800 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 105859 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105860 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 105919 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105920 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 105979 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 105980 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 106039 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106040 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106099 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106100 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106159 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106160 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106216 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106217 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106265
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 135569 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 135510 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 135509 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 135451 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135450 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135391 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135390 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135331 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135330 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 135271 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 135270 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 135211 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135210 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135151 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135150 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135091 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135090 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135034 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135033 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 134985 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 105559 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 105618 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 105619 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 105677 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105678 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 105737 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105738 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 105797 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105798 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 105857 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 105858 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 105917 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105918 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105977 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105978 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106037 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106038 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106094 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106095 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106143
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 136276 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 136217 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 136216 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 136158 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136157 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 136098 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136097 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 136038 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136037 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 135978 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135977 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 135918 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135917 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135858 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135857 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135798 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135797 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135741 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135740 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135692 Score = 894 bits (451), Expect = 0.0 Identities = 559/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 106350 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 106409 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 106410 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 106468 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106528 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106529 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106588 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106589 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 106648 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106649 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 106708 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106709 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106768 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106769 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106828 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106829 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106885 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106886 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106934
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 890 bits (449), Expect = 0.0 Identities = 557/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 106027 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 106086 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 106087 gagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 106145 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106146 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106205 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106206 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106265 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 106266 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagt 106325 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 106326 gttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 106385 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106386 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 106445 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 106446 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 106505 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | Sbjct: 106506 atcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acg 106561 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106562 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106611 Score = 841 bits (424), Expect = 0.0 Identities = 556/593 (93%), Gaps = 8/593 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 135882 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 135823 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 135822 gagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 135764 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135763 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135704 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135703 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135644 Query: 246 tgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttgag 304 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || ||| Sbjct: 135643 tgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtggag 135584 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctctga 363 || |||||||||||||| | |||||||||||||||||||||||||||||| | | |||| Sbjct: 135583 tgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccctga 135524 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 135523 cccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaagg 135464 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 135463 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 135404 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 135403 cccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag- 135348 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135347 acgaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135295
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 890 bits (449), Expect = 0.0 Identities = 557/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 136158 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 136099 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 136098 gagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 136040 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136039 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135980 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135979 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135920 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 135919 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagt 135860 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 135859 gttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 135800 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135799 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 135740 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 135739 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 135680 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | Sbjct: 135679 atcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acg 135624 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135623 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135574 Score = 890 bits (449), Expect = 0.0 Identities = 557/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 106249 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 106308 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 106309 gagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 106367 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106368 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106427 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106428 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106487 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||| Sbjct: 106488 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtggagt 106547 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 106548 gttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 106607 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106608 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 106667 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 106668 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 106727 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | | Sbjct: 106728 atcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-acg 106783 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106784 aggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106833
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 886 bits (447), Expect = 0.0 Identities = 554/588 (94%), Gaps = 4/588 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| || Sbjct: 83 gagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc-tg 141 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 201 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 202 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 261 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||| Sbjct: 262 tgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttgagt 321 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| ||| Sbjct: 322 cccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaacc 381 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 441 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 501 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 502 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatc 558 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 559 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 606
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 886 bits (447), Expect = 0.0 Identities = 558/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 136007 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 135948 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| || Sbjct: 135947 gagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tg 135889 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135888 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135829 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135828 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135769 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135768 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 135709 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135708 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 135649 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135648 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135589 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135588 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135529 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135528 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135472 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 135423 Score = 886 bits (447), Expect = 0.0 Identities = 558/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 106131 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 106190 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| || Sbjct: 106191 gagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc-tg 106249 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106250 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 106309 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106310 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 106369 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106370 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaa 106429 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106430 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgac 106489 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106490 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 106549 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106550 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106609 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106610 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106666 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106667 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 106715
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 886 bits (447), Expect = 0.0 Identities = 558/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 135536 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 135477 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 135476 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 135418 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135417 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 135358 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135357 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 135298 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 135297 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 135238 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 135237 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 135178 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135177 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 135118 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135117 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 135058 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 135057 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 135001 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 135000 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggca 134952 Score = 886 bits (447), Expect = 0.0 Identities = 558/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 105526 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 105585 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 105586 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 105644 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105645 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 105704 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105705 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 105764 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct: 105765 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaa 105824 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 105825 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctgac 105884 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105885 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 105944 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105945 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 106004 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 106005 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 106061 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 106062 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggca 106110
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 884 bits (446), Expect = 0.0 Identities = 558/591 (94%), Gaps = 6/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 81 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 82 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141 ctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccagagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 201 aaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaacc 260 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 261 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgaag 320 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 321 tgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctgac 380 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 440 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 441 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacccc 500 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 501 caccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcct 557 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 607
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 874 bits (441), Expect = 0.0 Identities = 555/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 131769 ggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggg 131710 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | || Sbjct: 131709 gagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tg 131651 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131650 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 131591 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131590 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 131531 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 131530 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagt 131471 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131470 gcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacc 131411 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131410 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 131351 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131350 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 131291 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | Sbjct: 131290 atcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggacc 131234 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131233 aga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 131185 Score = 874 bits (441), Expect = 0.0 Identities = 555/590 (94%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 101676 ggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggg 101735 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | || Sbjct: 101736 gagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc-tg 101794 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101795 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 101854 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101855 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 101914 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 101915 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtggagt 101974 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 101975 gcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacc 102034 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102035 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 102094 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 102095 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 102154 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | ||||| |||||||||||||||| | Sbjct: 102155 atcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagggggacc 102211 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102212 aga-ccctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 102260
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 870 bits (439), Expect = 0.0 Identities = 556/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 139482 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 139423 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 139422 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tg 139364 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 139363 ctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggagg 139304 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139303 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 139244 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 139243 tgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagt 139184 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 139183 gccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacc 139124 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139123 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 139064 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 139063 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 139004 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaa 544 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 139003 gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccca 138947 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138946 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 138898 Score = 870 bits (439), Expect = 0.0 Identities = 556/591 (94%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 109615 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 109674 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 109675 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tg 109733 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 109734 ctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggagg 109793 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109794 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 109853 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 109854 tgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagt 109913 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 109914 gccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacc 109973 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109974 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 110033 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 110034 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 110093 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaa 544 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 110094 gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccca 110150 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 110199
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 866 bits (437), Expect = 0.0 Identities = 557/593 (93%), Gaps = 7/593 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 139691 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 139632 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 139631 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tg 139573 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139572 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 139513 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139512 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 139453 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 139452 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaa 139393 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 139392 tgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgac 139333 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139332 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 139273 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139272 aaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 139213 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga-- 542 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 139212 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagact 139156 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139155 actaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 139103 Score = 866 bits (437), Expect = 0.0 Identities = 557/593 (93%), Gaps = 7/593 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 109608 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 109667 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 109668 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tg 109726 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109727 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 109786 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109787 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 109846 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gag 304 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 109847 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcgaa 109906 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 109907 tgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgac 109966 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109967 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 110026 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110027 aaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 110086 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga-- 542 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 110087 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagact 110143 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110144 actaggactctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 110196
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 862 bits (435), Expect = 0.0 Identities = 553/587 (94%), Gaps = 8/587 (1%) Strand = Plus / Plus Query: 10 gatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 69 ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1 gatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggggagt 60 Query: 70 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 129 ||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||||| Sbjct: 61 tgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgctga 119 Query: 130 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 189 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 179 Query: 190 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 239 Query: 250 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtgcc 308 |||||||||||||||||||||||||||||| ||||||||||||||||| | ||| ||| Sbjct: 240 aacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatgct 299 Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 300 gcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgacccga 358 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 359 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 418 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 419 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 478 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | || | Sbjct: 479 ggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccaggg- 534 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 580
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 858 bits (433), Expect = 0.0 Identities = 510/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggg 130454 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | || Sbjct: 130453 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tg 130395 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130394 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 130335 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130334 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 130275 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| Sbjct: 130274 tgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagt 130215 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 130214 gccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacc 130155 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130154 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 130095 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 130094 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 130035 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130034 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 858 bits (433), Expect = 0.0 Identities = 510/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagagacgaggaggggcgtagtaagcgacgaaatgcttcggg 102002 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | || Sbjct: 102003 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac-tg 102061 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102062 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 102121 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102122 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 102181 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||| Sbjct: 102182 tgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtggagt 102241 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 102242 gccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctgacc 102301 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102302 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 102361 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 102362 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccccc 102421 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102422 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Minus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 129926 Score = 87.7 bits (44), Expect = 4e-14 Identities = 44/44 (100%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 102530
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 850 bits (429), Expect = 0.0 Identities = 509/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 90 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 329 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 509 atcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 850 bits (429), Expect = 0.0 Identities = 509/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 90 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 329 gctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 509 atccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||| ||||||||||||||||||| | ||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggca 626
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 844 bits (426), Expect = 0.0 Identities = 551/590 (93%), Gaps = 6/590 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 4312 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 4313 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 4371 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4372 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 4431 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4432 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 4491 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || | Sbjct: 4492 tgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaat 4551 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4552 gttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacc 4611 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4612 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 4671 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4672 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccct 4731 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 4732 gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgg 4788 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4789 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 4836
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 844 bits (426), Expect = 0.0 Identities = 551/590 (93%), Gaps = 6/590 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 23613 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 23612 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 23554 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23553 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 23494 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 23493 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 23434 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || | Sbjct: 23433 tgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcgaat 23374 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23373 gttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacc 23314 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23313 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 23254 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23253 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccct 23194 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 23193 gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagctgg 23137 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23136 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 23089
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 844 bits (426), Expect = 0.0 Identities = 552/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 4581 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 4582 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 4640 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 4700 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4701 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 4760 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 4761 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaat 4820 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4821 gttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacc 4880 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4881 cgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 4940 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4941 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccct 5000 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | | Sbjct: 5001 ggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgg 5056 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5057 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 5104
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 844 bits (426), Expect = 0.0 Identities = 552/590 (93%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 4581 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 4582 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 4640 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4641 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 4700 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4701 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 4760 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | Sbjct: 4761 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcgaat 4820 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4821 gttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctgacc 4880 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4881 cgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 4940 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4941 aatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccct 5000 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | ||||||||| |||||||||| | | Sbjct: 5001 ggcggggagtgaaatagaacatgaaaccg---taagctcccaa-cagtgggaggagctgg 5056 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5057 gg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 5104
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 842 bits (425), Expect = 0.0 Identities = 508/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagagacgaagaagggcgtattaatcgacgaaatgcttcggg 46333 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 46334 gagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc-tg 46392 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46393 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagagg 46452 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 46453 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 46512 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 46513 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 46572 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 46573 accgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctgacc 46632 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46633 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 46692 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 46693 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 46752 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | ||| ||||||||||||| |||||||| | ||||| |||||||||||||| Sbjct: 46753 atcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggagg 46803 Score = 91.7 bits (46), Expect = 2e-15 Identities = 46/46 (100%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 46863
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 842 bits (425), Expect = 0.0 Identities = 508/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 90 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 329 gctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 509 atccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatga 577 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 842 bits (425), Expect = 0.0 Identities = 508/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 90 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 329 gctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 509 atcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 48.1 bits (24), Expect = 0.033 Identities = 40/44 (90%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| |||||||||||| || |||||||| |||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcatagg 623
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 842 bits (425), Expect = 0.0 Identities = 508/534 (95%), Gaps = 4/534 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 | ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 90 gggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||||| Sbjct: 329 gctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 509 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 63.9 bits (32), Expect = 6e-07 Identities = 42/44 (95%), Gaps = 1/44 (2%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| ||||||||||||||| ||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcatagg 623
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 841 bits (424), Expect = 0.0 Identities = 552/592 (93%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| Sbjct: 86284 ggtggatacctaggcacccagagacgaggaagggcgtggtaagcgacgaaatgcttcggg 86343 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| || Sbjct: 86344 gagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc-tg 86402 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86403 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 86462 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 86463 aatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaaccg 86522 Query: 246 tgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggttga 303 ||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||| Sbjct: 86523 tgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggttga 86582 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| | Sbjct: 86583 gtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaa 86642 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86643 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 86702 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86703 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 86762 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 86763 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaa 86819 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86820 ttagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 86871
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 841 bits (424), Expect = 0.0 Identities = 552/592 (93%), Gaps = 6/592 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| Sbjct: 88370 ggtggatacctaggcacccagagacgaggaagggcgtggtaagcgacgaaatgcttcggg 88429 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| || Sbjct: 88430 gagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc-tg 88488 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 88489 ctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagagg 88548 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88549 aatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 88608 Query: 246 tgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggttga 303 |||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||| Sbjct: 88609 tgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggttga 88668 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 || | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| | Sbjct: 88669 gtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctctaa 88728 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88729 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 88788 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88789 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 88848 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 88849 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaaaa 88905 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 88906 ttagatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 88957
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 839 bits (423), Expect = 0.0 Identities = 549/587 (93%), Gaps = 7/587 (1%) Strand = Plus / Minus Query: 10 gatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 69 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 142794 Query: 70 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 129 ||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||| Sbjct: 142793 tgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctga 142735 Query: 130 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 189 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142734 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 142675 Query: 190 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142674 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 142615 Query: 250 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgcc 308 |||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 142614 aacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgct 142555 Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 142554 gcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccga 142495 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 142494 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 142435 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142434 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 142375 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 142374 ggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg- 142319 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 142273 Score = 839 bits (423), Expect = 0.0 Identities = 549/587 (93%), Gaps = 7/587 (1%) Strand = Plus / Plus Query: 10 gatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagt 69 ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggagt 110534 Query: 70 tgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctga 129 ||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||||| Sbjct: 110535 tgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgctga 110593 Query: 130 atccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 189 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110594 atccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaa 110653 Query: 190 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110654 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 110713 Query: 250 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtgcc 308 |||||||||||||||||| |||||||||| ||||||||||||||||| | || ||||| Sbjct: 110714 aacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtgct 110773 Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 110774 gcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgacccga 110833 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110834 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaaat 110893 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110894 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 110953 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | || | Sbjct: 110954 ggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagccaggg- 111009 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 -ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 111055
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 835 bits (421), Expect = 0.0 Identities = 556/593 (93%), Gaps = 10/593 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || | ||||||||||||||| Sbjct: 1789 ggtggatacctaggcacccagagacgaggaagggcgtagtaatc-acgaaatgcttcggg 1847 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 1848 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 1906 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1907 ctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccagagg 1966 Query: 186 aaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1967 aaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 2026 Query: 245 gtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggttg 302 ||||||||||||||||||||||||||||||||| | ||||||||||||||||| | | Sbjct: 2027 gtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcccg 2086 Query: 303 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 2087 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 2146 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2147 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 2206 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2207 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 2266 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2267 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 2323 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2324 caggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 2374
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 833 bits (420), Expect = 0.0 Identities = 551/591 (93%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 518 ggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggg 577 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | || Sbjct: 578 gagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tg 636 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 696 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 756 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 757 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagt 816 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 817 gcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacc 876 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 877 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 936 Query: 426 aatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 937 aatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacccc 996 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || | Sbjct: 997 catcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggagaca 1053 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1054 g---gctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 1101
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 829 bits (418), Expect = 0.0 Identities = 537/573 (93%), Gaps = 7/573 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 130 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| || Sbjct: 131 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc-tg 189 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 190 ctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccggagg 249 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 250 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 309 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| Sbjct: 310 tgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaagt 369 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 370 gccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacc 429 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 489 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 490 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccc 549 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggaaa 544 ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | | Sbjct: 550 gtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagccca 606 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatga 577 | | |||||||||||||||||||||||||||| Sbjct: 607 ggg--ctctgaccgcgtgcctgttgaagaatga 637
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 72 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 131 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 132 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 192 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 252 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 312 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 371 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 372 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 432 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 492 tagtga 497 |||||| Sbjct: 421 tagtga 426
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 821 bits (414), Expect = 0.0 Identities = 554/594 (93%), Gaps = 9/594 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 131790 Query: 66 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 124 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 131789 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 131731 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 131730 gctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 131671 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131670 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 131611 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 131610 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 131551 Query: 305 --tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 131550 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 131491 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131490 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 131431 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 131430 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 131371 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gg 541 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 131370 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagg 131314 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131313 ctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 131261 Score = 821 bits (414), Expect = 0.0 Identities = 554/594 (93%), Gaps = 9/594 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 103604 Query: 66 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 124 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 103605 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 103663 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||| | |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 103664 gctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccagag 103723 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103724 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 103783 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 103784 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 103843 Query: 305 --tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 103844 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 103903 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103904 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 103963 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 103964 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 104023 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-gg 541 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| || Sbjct: 104024 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagg 104080 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104081 ctcggga-ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 104133
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 821 bits (414), Expect = 0.0 Identities = 553/592 (93%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct: 122 ggtggatacctaggcacccagagacgaggaagggcgtagtaatcgacgaaatgcttcggg 181 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| || Sbjct: 182 gagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tg 240 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccagag 184 ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 241 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccagag 300 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 360 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggttga 303 ||||||||||| ||||||||||||||||||||||| |||||||||||||||| || || Sbjct: 361 gtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgcccga 419 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 479 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 480 cccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaaggc 539 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 540 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-cc 598 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 599 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggcca- 654 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 655 ---gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 703
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 815 bits (411), Expect = 0.0 Identities = 544/586 (92%), Gaps = 7/586 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | || Sbjct: 90 gagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 329 gcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccccc 508 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| || || Sbjct: 509 atcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagacag 565 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||| ||||||||||||||| ||||||||||||||||||| Sbjct: 566 ---gctctgaacgcgtgcctgttgaaaaatgagccggcgactcata 608
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 807 bits (407), Expect = 0.0 Identities = 548/591 (92%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| Sbjct: 52664 ggtggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggg 52605 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| || Sbjct: 52604 gagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tg 52546 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 52545 ctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagagg 52486 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 52485 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccg 52426 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgag 304 |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 52425 cgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaa 52366 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 52365 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgac 52306 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52305 ccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 52246 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 52245 aaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccc 52186 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || |||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 52185 cattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 52129 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52128 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 52080 Score = 807 bits (407), Expect = 0.0 Identities = 548/591 (92%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| Sbjct: 37164 ggtggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggg 37223 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| || Sbjct: 37224 gagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tg 37282 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 37283 ctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagagg 37342 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 37343 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccg 37402 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgag 304 |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 37403 cgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaa 37462 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 37463 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgac 37522 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37523 ccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 37582 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 37583 aaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccc 37642 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || |||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 37643 cattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 37699 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37700 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 37748
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 807 bits (407), Expect = 0.0 Identities = 548/591 (92%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||| Sbjct: 4092 ggtggatacctaggcacccagagacgaggaaggatgtagtaatcgacgaaatgcttcggg 4151 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| || Sbjct: 4152 gagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc-tg 4210 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4211 ctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccagagg 4270 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4271 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaaccg 4330 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttgag 304 |||||||||||||||||||||||||| ||| || ||||||||||||||| | | |||| Sbjct: 4331 cgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttgaa 4390 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 4391 tgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctgac 4450 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4451 ccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 4510 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 4511 aaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacccc 4570 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || |||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 4571 cattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca 4627 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4628 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 4676
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 803 bits (405), Expect = 0.0 Identities = 546/590 (92%), Gaps = 5/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 116187 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 116128 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 116127 gagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tg 116069 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116068 ctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagagg 116009 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 116008 aaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccg 115949 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| Sbjct: 115948 tgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagt 115890 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| ||| Sbjct: 115889 cctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacc 115830 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 115829 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggcta 115770 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115769 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 115710 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 115709 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatt 115653 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 115652 gaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 115603 Score = 803 bits (405), Expect = 0.0 Identities = 546/590 (92%), Gaps = 5/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 85933 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 85992 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| || Sbjct: 85993 gagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc-tg 86051 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86052 ctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagagg 86111 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct: 86112 aaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaaccg 86171 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||||| Sbjct: 86172 tgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttgagt 86230 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| ||| Sbjct: 86231 cctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaacc 86290 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86291 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggcta 86350 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86351 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 86410 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 86411 atcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatt 86467 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 86468 gaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 86517
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 801 bits (404), Expect = 0.0 Identities = 549/596 (92%), Gaps = 10/596 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 128424 ggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcggg 128365 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 128364 gagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 128306 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128305 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 128246 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 128245 aaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccg 128186 Query: 246 tgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcgg 299 |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 128185 tgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcgg 128126 Query: 300 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 359 |||||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||| Sbjct: 128125 ttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgct 128066 Query: 360 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 419 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128065 ctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 128006 Query: 420 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 479 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 128005 aggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaaga 127946 Query: 480 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 127945 acccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 127889 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||| ||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 127888 agaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggca 127833 Score = 801 bits (404), Expect = 0.0 Identities = 549/596 (92%), Gaps = 10/596 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 95023 ggtggatacctaggcactcagagacgaggaagggcgtagcaatcgacgaaatgcttcggg 95082 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 95083 gagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 95141 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95142 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 95201 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 95202 aaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaaccg 95261 Query: 246 tgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagcgg 299 |||||||||||||||||| |||| ||||||||| ||||||||||||||||||||| Sbjct: 95262 tgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagcgg 95321 Query: 300 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 359 |||||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||| Sbjct: 95322 ttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacgct 95381 Query: 360 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 419 || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95382 ctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 95441 Query: 420 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 479 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 95442 aggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaaga 95501 Query: 480 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 95502 acccccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 95558 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||| ||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct: 95559 agaattggatctctgaccgcatgcctgttgaggaatgagccggcgactcataggca 95614
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 797 bits (402), Expect = 0.0 Identities = 405/406 (99%) Strand = Plus / Plus Query: 190 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 250 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 309 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 310 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 369 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 370 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 430 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 490 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 406
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 793 bits (400), Expect = 0.0 Identities = 544/589 (92%), Gaps = 5/589 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 2125 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 2126 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 2184 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2185 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 2244 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 2245 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccg 2304 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| Sbjct: 2305 tgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagt 2364 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgac 364 | ||||||||||||| | |||||||||||||||||||| || | || ||||||| || Sbjct: 2365 cctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaac 2424 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2425 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 2484 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2485 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 2544 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 2545 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 2601 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2602 cgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 2650
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 793 bits (400), Expect = 0.0 Identities = 403/404 (99%) Strand = Plus / Plus Query: 192 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 252 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 312 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 371 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 372 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 432 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 492 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 404
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 793 bits (400), Expect = 0.0 Identities = 403/404 (99%) Strand = Plus / Plus Query: 192 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 252 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 312 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 371 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 372 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 432 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 492 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 404
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 793 bits (400), Expect = 0.0 Identities = 544/589 (92%), Gaps = 5/589 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 118068 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 118067 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 118009 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118008 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 117949 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 117948 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccg 117889 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| Sbjct: 117888 tgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagt 117829 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgac 364 | ||||||||||||| | |||||||||||||||||||| || | || ||||||| || Sbjct: 117828 cctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaac 117769 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 117768 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 117709 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117708 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 117649 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 117648 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 117592 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 117591 cgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 117543 Score = 793 bits (400), Expect = 0.0 Identities = 544/589 (92%), Gaps = 5/589 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 90034 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 90035 gagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 90093 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90094 ctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 90153 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 90154 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaaccg 90213 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||||| Sbjct: 90214 tgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttgagt 90273 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctgac 364 | ||||||||||||| | |||||||||||||||||||| || | || ||||||| || Sbjct: 90274 cctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctctaac 90333 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 90334 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggct 90393 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 90394 aaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacccc 90453 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 90454 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaat 90510 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 90511 cgaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 90559
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 791 bits (399), Expect = 0.0 Identities = 542/588 (92%), Gaps = 4/588 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 83 gagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc-tg 141 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142 ctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccagagg 201 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 202 aaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaaccg 261 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| | Sbjct: 262 tgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttgaat 321 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| ||| Sbjct: 322 cctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaacc 381 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 382 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggcta 441 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 501 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| ||| Sbjct: 502 ataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagaatc 558 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 559 gaatctctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 606
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 791 bits (399), Expect = 0.0 Identities = 402/403 (99%) Strand = Plus / Plus Query: 193 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 253 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 313 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 372 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 373 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 433 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 493 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 403
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 791 bits (399), Expect = 0.0 Identities = 402/403 (99%) Strand = Plus / Plus Query: 193 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 253 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 313 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 372 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 373 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 433 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 493 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 406
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 787 bits (397), Expect = 0.0 Identities = 543/590 (92%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3912 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 3971 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 3972 gagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 4030 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4031 ctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagagg 4090 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 4091 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 4150 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 4151 tgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 4210 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||| |||||| | ||||||||||||||||||| |||| |||| || | ||| Sbjct: 4211 tctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacc 4270 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4271 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 4330 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4331 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 4390 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 4391 atcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatc 4447 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 4448 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 4497
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 787 bits (397), Expect = 0.0 Identities = 543/590 (92%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| || Sbjct: 66 gagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc-tg 124 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||| || |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 125 ctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccggagg 184 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 185 aagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaaccg 244 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||| |||| | | |||| |||| ||||||||||||| ||||||| Sbjct: 245 tgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttgagt 304 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| ||| Sbjct: 305 cctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaacc 364 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365 cgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 424 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 484 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| |||||||| | |||| ||||||||||||||| ||| Sbjct: 485 atcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggagaatc 541 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 542 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 591
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 787 bits (397), Expect = 0.0 Identities = 400/401 (99%) Strand = Plus / Plus Query: 195 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 255 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 315 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 374 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 375 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 435 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 494 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 495 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 554 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 555 accgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggca 401
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 787 bits (397), Expect = 0.0 Identities = 543/590 (92%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 81 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 82 gagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141 ctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 201 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 260 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 261 tgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 320 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||| |||||| | ||||||||||||||||||| |||| |||| || | ||| Sbjct: 321 tctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacc 380 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 440 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 500 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 501 atcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatc 557 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 558 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 607
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 787 bits (397), Expect = 0.0 Identities = 543/590 (92%), Gaps = 4/590 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 151223 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 151164 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 151163 gagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 151105 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 151104 ctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagagg 151045 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 151044 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 150985 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 150984 tgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 150925 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||| |||||| | ||||||||||||||||||| |||| |||| || | ||| Sbjct: 150924 tctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacc 150865 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150864 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 150805 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150804 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 150745 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 150744 atcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatc 150688 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 150687 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 150638 Score = 787 bits (397), Expect = 0.0 Identities = 543/590 (92%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117443 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 117502 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 117503 gagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 117561 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117562 ctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagagg 117621 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 117622 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 117681 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 117682 tgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 117741 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||| |||||| | ||||||||||||||||||| |||| |||| || | ||| Sbjct: 117742 tctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacc 117801 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117802 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 117861 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117862 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 117921 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 117922 atcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatc 117978 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 117979 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 118028
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 787 bits (397), Expect = 0.0 Identities = 543/590 (92%), Gaps = 4/590 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 81 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| || Sbjct: 82 gagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc-tg 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | |||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141 ctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccagagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 201 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 260 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| Sbjct: 261 tgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttgagt 320 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 | |||||| |||||| | ||||||||||||||||||| |||| |||| || | ||| Sbjct: 321 tctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaacc 380 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 440 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 500 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||||||| ||||| || | |||| |||||||||| |||| ||| Sbjct: 501 atcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgagaggagaatc 557 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 558 ggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 607
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 785 bits (396), Expect = 0.0 Identities = 546/594 (91%), Gaps = 8/594 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| || Sbjct: 83 gagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc-tg 141 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| || |||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 142 ctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccggagg 201 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 202 aaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaaccg 261 Query: 246 tgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcggtt 301 |||||||||||||||||| |||| |||||| || ||| ||||||||||||||| ||| Sbjct: 262 tgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcagtt 321 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 |||| | |||||| |||||| | ||||||||| |||||||||| || | |||||||||| Sbjct: 322 gagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgctct 381 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 441 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 501 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 502 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 558 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 559 aatcggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 612
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 775 bits (391), Expect = 0.0 Identities = 505/540 (93%), Gaps = 5/540 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagagacgaggaagggcgtattaatcgacgaaatgcttcggg 89 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | || Sbjct: 90 gagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc-tg 148 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 ctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 208 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 268 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||| ||||||||||||||| | || |||| Sbjct: 269 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtggagt 328 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || | ||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 329 gcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctgacc 388 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 448 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 449 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-cccc 507 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 | ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| ||||| Sbjct: 508 atcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagaaag 564
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 773 bits (390), Expect = 0.0 Identities = 543/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 146537 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 146478 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | || Sbjct: 146477 gagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tg 146419 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146418 ctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagagg 146359 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 146358 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 146299 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 146298 tgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagt 146239 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgac 364 | | ||||||||||| | |||||||||||||||||||||||| || |||||||| || Sbjct: 146238 cctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaac 146179 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 146178 ccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggct 146119 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 146118 aaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccc 146059 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 | ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 146058 cgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaat 146002 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 146001 cggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 145951 Score = 773 bits (390), Expect = 0.0 Identities = 543/591 (91%), Gaps = 5/591 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111925 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 111984 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | || Sbjct: 111985 gagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac-tg 112043 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112044 ctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccagagg 112103 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 112104 aagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaaccg 112163 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 ||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 112164 tgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttgagt 112223 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctgac 364 | | ||||||||||| | |||||||||||||||||||||||| || |||||||| || Sbjct: 112224 cctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctccaac 112283 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 112284 ccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaaggct 112343 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112344 aaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacccc 112403 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 | ||| ||||||||||||| |||||||| | ||||||||||||||||||| ||| Sbjct: 112404 cgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagaat 112460 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 112461 cggatccctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 112511
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 767 bits (387), Expect = 0.0 Identities = 549/591 (92%), Gaps = 18/591 (3%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 711 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 652 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| ||| Sbjct: 651 gagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-ctg 598 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||||||||||| |||||||||||||| || |||| ||| ||||||||||||||||||| Sbjct: 597 ctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccagagg 545 Query: 186 aaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 aaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 485 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||| Sbjct: 484 gtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtggag 425 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||| Sbjct: 424 tgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctgac 365 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 305 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 304 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccc 245 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 244 catcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagccc 188 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 g-gggctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 138
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 759 bits (383), Expect = 0.0 Identities = 456/477 (95%), Gaps = 4/477 (0%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggggag 81 Query: 69 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 128 |||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||||| Sbjct: 82 ttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgctg 140 Query: 129 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 188 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 aatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 200 Query: 189 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 201 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtga 260 Query: 249 aaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgcc 308 ||||||||||||||||||||||||||||||| |||||||||||||||||||| || | | Sbjct: 261 aaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaatact 320 Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 321 gcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgacccga 380 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 440 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 ||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 441 actac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 755 bits (381), Expect = 0.0 Identities = 447/468 (95%), Gaps = 1/468 (0%) Strand = Plus / Plus Query: 8 tggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcgggga 67 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcgggga 60 Query: 68 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 61 gttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgcc 119 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 120 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagaggaa 179 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 239 Query: 248 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 307 |||||||||||||||||||||||||||||||| ||||||||||||||||||| || | Sbjct: 240 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaacac 299 Query: 308 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 367 |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct: 300 cgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacccg 359 Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 419 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 475 ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 420 tactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 745 bits (376), Expect = 0.0 Identities = 479/509 (94%), Gaps = 7/509 (1%) Strand = Plus / Minus Query: 88 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 147 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 148 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 208 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 268 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 326 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 387 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 446 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 447 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 506 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 507 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 566 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 567 ttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcataggca 10
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 731 bits (369), Expect = 0.0 Identities = 450/474 (94%), Gaps = 6/474 (1%) Strand = Plus / Plus Query: 123 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 182 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 183 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 243 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 301 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 302 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 361 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 362 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 422 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 481 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 482 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 485
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 710 bits (358), Expect = 0.0 Identities = 378/385 (98%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 123448 ggtggatacctaggtacccagagatgaggaagggcgtagcaagcgacgaaatgcttcggg 123389 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 123388 gagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 123329 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123328 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 123269 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123268 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 123209 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123208 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 123149 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 123148 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccc 123089 Query: 366 cgagtagcatggggcacgtggaatc 390 ||||||||||||||||||||||||| Sbjct: 123088 cgagtagcatggggcacgtggaatc 123064 Score = 416 bits (210), Expect = e-113 Identities = 213/214 (99%) Strand = Plus / Minus Query: 382 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||| |||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggca 122607
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 710 bits (358), Expect = 0.0 Identities = 378/385 (98%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 12825989 ggtggatacctaggtacccagagatgaggaagggcgtagcaagcgacgaaatgcttcggg 12825930 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 12825929 gagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 12825870 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825869 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 12825810 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825809 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 12825750 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825749 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 12825690 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 12825689 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgccc 12825630 Query: 366 cgagtagcatggggcacgtggaatc 390 ||||||||||||||||||||||||| Sbjct: 12825629 cgagtagcatggggcacgtggaatc 12825605 Score = 416 bits (210), Expect = e-113 Identities = 213/214 (99%) Strand = Plus / Minus Query: 382 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||| |||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggca 12825148 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 81 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 140 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 141 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 200 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 201 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 261 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 320 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 321 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 380 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 381 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 441 ccgata 446 |||||| Sbjct: 361 ccgata 366
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 696 bits (351), Expect = 0.0 Identities = 535/591 (90%), Gaps = 8/591 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagagacgaggaagggtgtagtaatcgacgaaatgcttcggg 81 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| || Sbjct: 82 gagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc-tg 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 || |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 ctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccagagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 201 aaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaaccg 260 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttgag 304 |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || | Sbjct: 261 cgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagcttaaa 320 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgac 364 || |||||||||||||| |||||||||||| | |||||||||||| || |||||||| Sbjct: 321 tgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctgac 380 Query: 365 ccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggct 424 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 381 ccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaaggct 440 Query: 425 aaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| ||| Sbjct: 441 aaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-ccc 499 Query: 485 cagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaa 544 || |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | | Sbjct: 500 cattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagcca 556 Query: 545 gtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 ggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 605
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 676 bits (341), Expect = 0.0 Identities = 380/394 (96%), Gaps = 13/394 (3%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggca 75093 Score = 394 bits (199), Expect = e-106 Identities = 204/206 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 75690 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 75631 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 75630 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 75571 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75570 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 75511 Query: 186 aaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||| Sbjct: 75510 aaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 676 bits (341), Expect = 0.0 Identities = 380/394 (96%), Gaps = 13/394 (3%) Strand = Plus / Plus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggca 382445 Score = 394 bits (199), Expect = e-106 Identities = 204/206 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 381848 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 381907 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 381908 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 381967 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381968 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 382027 Query: 186 aaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||| Sbjct: 382028 aaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 676 bits (341), Expect = 0.0 Identities = 380/394 (96%), Gaps = 13/394 (3%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggca 113184 Score = 394 bits (199), Expect = e-106 Identities = 204/206 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 113781 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 113722 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 113721 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 113662 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113661 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 113602 Query: 186 aaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||| Sbjct: 113601 aaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 676 bits (341), Expect = 0.0 Identities = 380/394 (96%), Gaps = 13/394 (3%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggca 367866 Score = 676 bits (341), Expect = 0.0 Identities = 380/394 (96%), Gaps = 13/394 (3%) Strand = Plus / Minus Query: 207 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 267 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 327 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 386 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 387 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 441 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 442 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 502 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 561 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 562 gcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggca 184471 Score = 394 bits (199), Expect = e-106 Identities = 204/206 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 368463 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 368404 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 368403 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 368344 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368343 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 368284 Query: 186 aaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||| Sbjct: 368283 aaaagaaagcaaaagcgattcccgta 368258 Score = 394 bits (199), Expect = e-106 Identities = 204/206 (99%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 185068 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 185009 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 185008 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 184949 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184948 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 184889 Query: 186 aaaagaaagcaaaagcgattcccgta 211 |||||||||||||||||||||||||| Sbjct: 184888 aaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagta 177 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 108 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 167 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 168 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 228 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 288 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 347 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 348 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 407 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 408 gaccaccttgcaaggctaaatactcctgggtg 439 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 559 bits (282), Expect = e-156 Identities = 377/404 (93%), Gaps = 5/404 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 2680 Query: 66 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 124 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 2681 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 2739 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 2740 gctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagag 2799 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2800 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 2859 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 2860 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 2919 Query: 305 --tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| |||||||||||||| | |||||||||||||||||||||||| ||||| |||||| Sbjct: 2920 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctg 2978 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 406 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2979 acccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 559 bits (282), Expect = e-156 Identities = 377/404 (93%), Gaps = 5/404 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 935 Query: 66 gagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgcct 124 ||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| | Sbjct: 936 gagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc-t 994 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 995 gctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccagag 1054 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 1114 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 |||||||||||||||||||||||| ||||||| || ||||||||||||||||| | ||| Sbjct: 1115 gtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcagag 1174 Query: 305 --tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 362 ||| |||||||||||||| | |||||||||||||||||||||||| ||||| |||||| Sbjct: 1175 aatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctctg 1233 Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 406 ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1234 acccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 549 bits (277), Expect = e-153 Identities = 506/582 (86%), Gaps = 3/582 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 143941 ggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaaatgcttcggg 144000 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||| | |||||||||||||||||| ||||||| |||||| |||||||||| Sbjct: 144001 gagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcctg 144060 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || ||||| |||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 144061 ctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggagg 144120 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 | | |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||| Sbjct: 144121 aggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccg 144180 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||| ||||||||||||||||| || || | || | ||||||||||| ||||||| Sbjct: 144181 tgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagt 144240 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||| |||||| | ||||||||||||| ||| | |||||| | |||| ||| Sbjct: 144241 gctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacc 144300 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 | |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| Sbjct: 144301 caagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggcta 144360 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 144361 aatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaaccccc 144420 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 ||| ||||||||||||| |||||||| ||||||||||||||||||||| ||| | Sbjct: 144421 gtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatg 144477 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 144478 agatctctaaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 549 bits (277), Expect = e-153 Identities = 506/582 (86%), Gaps = 3/582 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 88910 ggtggatacctaggcacccagagacgaagaagggcgtggcaaacgacgaaatgcttcggg 88851 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||||||| | |||||||||||||||||| ||||||| |||||| |||||||||| Sbjct: 88850 gagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcctg 88791 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || ||||| |||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 88790 ctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccggagg 88731 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 | | |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||||| Sbjct: 88730 aggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaaccg 88671 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 305 |||| ||||||||||||||||| || || | || | ||||||||||| ||||||| Sbjct: 88670 tgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttgagt 88611 Query: 306 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 365 || |||||| |||||| | ||||||||||||| ||| | |||||| | |||| ||| Sbjct: 88610 gctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaacc 88551 Query: 366 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 425 | |||||||||||||||| |||||||||||||||||| |||||||||||| ||||||| Sbjct: 88550 caagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggcta 88491 Query: 426 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 485 |||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 88490 aatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaaccccc 88431 Query: 486 agtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaag 545 ||| ||||||||||||| |||||||| ||||||||||||||||||||| ||| | Sbjct: 88430 gtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtgggaggagaatg 88374 Query: 546 tgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 88373 agatctctaaccgcgtgcctgttgaagaatgagccggcgact 88332
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 537 bits (271), Expect = e-149 Identities = 274/275 (99%) Strand = Plus / Plus Query: 321 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 380 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 381 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 440 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 441 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 501 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 561 tgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggca 275
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 521 bits (263), Expect = e-145 Identities = 271/274 (98%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 139 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 199 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgt 279 |||||||||||||||||||||||||||||||||| Sbjct: 260 tgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 521 bits (263), Expect = e-145 Identities = 271/274 (98%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 79 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 80 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 139 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 199 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 259 Query: 246 tgaaaacggggttgtgggagagcaatacaagcgt 279 |||||||||||||||||||||||||||||||||| Sbjct: 260 tgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 498 bits (251), Expect = e-137 Identities = 336/362 (92%), Gaps = 2/362 (0%) Strand = Plus / Plus Query: 5 gggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcgg 64 |||||||||||||||||||||| || |||||||||||||| || |||||||||||||||| Sbjct: 177052 gggtggatacctaggcacccagagaggaggaagggcgtagtaatcgacgaaatgcttcgg 177111 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 |||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| | Sbjct: 177112 ggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc-t 177170 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||||| |||||||||||| |||| |||||||||||| |||||||||||||||| Sbjct: 177171 gctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccagag 177230 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 177231 gaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaacc 177290 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttga 303 ||||||||||||||||||||||||||||||||||| |||| |||||||||||| | || Sbjct: 177291 gtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccga 177350 Query: 304 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 363 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 177351 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctga 177410 Query: 364 cc 365 || Sbjct: 177411 cc 177412 Score = 91.7 bits (46), Expect = 2e-15 Identities = 46/46 (100%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 177450 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagc 179 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagc 179 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 472 bits (238), Expect = e-130 Identities = 510/597 (85%), Gaps = 18/597 (3%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| Sbjct: 139247 ggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac--aatgcttcggg 139190 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139189 aagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc-- 139132 Query: 126 ctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcca 181 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 139131 --gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagccg 139074 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 139073 ggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaa 139014 Query: 242 accgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagc 297 |||||| ||||||||||||||||||| ||| ||| ||||||||| |||| ||||| Sbjct: 139013 accgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagc 138955 Query: 298 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 357 ||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| | Sbjct: 138954 ggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttacg 138895 Query: 358 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 417 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 138894 ctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcg 138835 Query: 418 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 477 ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138834 taaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 138775 Query: 478 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 537 ||||||||| ||| ||||||||||||| |||||||| | ||||||| |||||||||| Sbjct: 138774 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtggga 138718 Query: 538 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 594 || ||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138717 ggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggc 138661 Score = 472 bits (238), Expect = e-130 Identities = 510/597 (85%), Gaps = 18/597 (3%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||| Sbjct: 82630 ggtggatacctaggcacccaaagacgaggaagggcgtagcaggcgac--aatgcttcggg 82687 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82688 aagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc-- 82745 Query: 126 ctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagcca 181 ||||||||| | || |||||||| ||| ||||||| |||||||| | ||||| Sbjct: 82746 --gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagccg 82803 Query: 182 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 | |||| |||| |||||||||||||||| |||||||||||||||| ||||| ||||||| Sbjct: 82804 ggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcctaa 82863 Query: 242 accgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaagc 297 |||||| ||||||||||||||||||| ||| ||| ||||||||| |||| ||||| Sbjct: 82864 accgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaagc 82922 Query: 298 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 357 ||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| | Sbjct: 82923 ggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggcttacg 82982 Query: 358 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 417 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 82983 ctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacctcg 83042 Query: 418 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 477 ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 83043 taaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaa 83102 Query: 478 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 537 ||||||||| ||| ||||||||||||| |||||||| | ||||||| |||||||||| Sbjct: 83103 gaacccccatcggggagtgaaatagaacatgaaaccg---taagctcccgagcagtggga 83159 Query: 538 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggc 594 || ||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 83160 ggagaattggatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggc 83216
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 438 bits (221), Expect = e-120 Identities = 224/225 (99%) Strand = Plus / Plus Query: 371 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 431 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 491 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 550 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 225
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 416 bits (210), Expect = e-113 Identities = 314/348 (90%), Gaps = 3/348 (0%) Strand = Plus / Minus Query: 248 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 307 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 308 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 367 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 488 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 547 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 548 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggca 5940 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 47 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 106 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 107 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 166 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 167 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 226 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 227 atgggagcagcctaaaccgt 246 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 416 bits (210), Expect = e-113 Identities = 246/257 (95%), Gaps = 1/257 (0%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 79689 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| || Sbjct: 79688 gagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc-tg 79630 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79629 ctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 79570 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 79569 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaaccg 79510 Query: 246 tgaaaacggggttgtgg 262 ||||||||||||||||| Sbjct: 79509 tgaaaacggggttgtgg 79493
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 414 bits (209), Expect = e-112 Identities = 209/209 (100%) Strand = Plus / Plus Query: 387 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 447 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 507 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 567 ttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggca 209
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 103 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 162 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 223 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 282 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 283 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 342 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 343 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 402 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 403 gcaaggaccaccttgcaag 421 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||| | Sbjct: 3780 ggtggatacctatgcacccagagacgaggaagggcatagttagcgacgaaatgcttcaga 3721 Query: 66 gagttgaaaataagcatagatccggag 92 |||||| |||||||| |||||| |||| Sbjct: 3720 gagttgcaaataagcgtagatcaggag 3694 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 430 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 489 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 490 ggtagtgaaatagaacgtgaaacc 513 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||| ||| ||||||||||||||| ||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggca 3204
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 406 bits (205), Expect = e-110 Identities = 210/212 (99%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 75788 ggtggatacctaggcacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 75847 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75848 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 75907 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75908 cggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 75967 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcg 217 |||||||||||||||||||||||||||||||| Sbjct: 75968 aaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 484 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 156 ggcgaactgaaacatcttag 175 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 200 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 259 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 260 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 318 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 319 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 378 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 379 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 438 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 439 gaccgata 446 |||||||| Sbjct: 241 gaccgata 248
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 400 bits (202), Expect = e-108 Identities = 256/272 (94%), Gaps = 4/272 (1%) Strand = Plus / Plus Query: 324 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 383 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 384 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 444 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 503 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 504 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 563 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 564 ctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggca 270
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 363 bits (183), Expect = 4e-97 Identities = 494/588 (84%), Gaps = 15/588 (2%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| || || ||||||| || || || ||||||||| ||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgctttggg 80 Query: 66 gagttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 ||||| |||| ||| ||||||||||||||||||| ||||||| ||||||| |||||| | Sbjct: 81 gagttaaaaaataaacatagatccggagattcccgaataggtaaaccttt--aactgc-t 137 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 ||| | |||||| |||| ||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 138 gcttattccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagag 195 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||| |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| | Sbjct: 196 gaaaataaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatc 255 Query: 245 gtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgag 304 | |||| ||||||| || ||||||| ||| || || |||||| || || || ||| Sbjct: 256 gctaaaatggggttgggg---agcaataaaagtattttgttgctagacggagtagtggag 312 Query: 305 tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga- 363 | | | ||||||||||| | |||||||||| |||| |||| ||||||||||| | | Sbjct: 313 ttctgaaccctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaa 372 Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| || |||||||||||||||||||||||||||||||||| ||||| Sbjct: 373 cccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggc 432 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||| Sbjct: 433 taaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 492 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| |||| |||||| |||||| ||||| | | ||| ||||||||||||||| || Sbjct: 493 ccattggggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagac 549 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 || | |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 550 aggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcata 595
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 489 gggtagtgaaatagaacgtgaaaccgt 515 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 305 bits (154), Expect = 9e-80 Identities = 219/241 (90%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 83 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 142 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 202 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 203 aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 262 Query: 246 t 246 | Sbjct: 263 t 263 Score = 299 bits (151), Expect = 5e-78 Identities = 213/233 (91%), Gaps = 3/233 (1%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 620
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 301 bits (152), Expect = 1e-78 Identities = 160/163 (98%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1567 ggtggatacctaggtacccagagacgaggaagggcgtagcaagcgacgaaatgcttcggg 1626 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1627 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctg 1686 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaac 168 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1687 ctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 299 bits (151), Expect = 5e-78 Identities = 213/233 (91%), Gaps = 3/233 (1%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 607 Score = 293 bits (148), Expect = 3e-76 Identities = 217/241 (90%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 69 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 70 gagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 129 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 189 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 190 aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 249 Query: 246 t 246 | Sbjct: 250 t 250
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 297 bits (150), Expect = 2e-77 Identities = 212/232 (91%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 724 Score = 295 bits (149), Expect = 8e-77 Identities = 217/240 (90%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagagacgaagaagggcgtagcaagcgacgaaatgcttcggg 186 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 || ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 187 aagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcctg 246 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 ctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 306 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||| Sbjct: 307 aaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 293 bits (148), Expect = 3e-76 Identities = 234/263 (88%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | || Sbjct: 83 gagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttg 142 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 143 ctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagagg 202 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 203 aaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccg 262 Query: 246 tgaaaacggggttgtgggagagc 268 |||| ||||||||||||||||| Sbjct: 263 cgaaagcggggttgtgggagagc 285 Score = 272 bits (137), Expect = 1e-69 Identities = 268/311 (86%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 285 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 344 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 345 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 404 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 405 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 464 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 524 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 525 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 584 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 585 actcataggca 595 ||| ||||||| Sbjct: 599 acttataggca 609
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 293 bits (148), Expect = 3e-76 Identities = 234/263 (88%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||| Sbjct: 125242 ggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggg 125183 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | || Sbjct: 125182 gagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttg 125123 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 125122 ctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagagg 125063 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 125062 aaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccg 125003 Query: 246 tgaaaacggggttgtgggagagc 268 |||| ||||||||||||||||| Sbjct: 125002 cgaaagcggggttgtgggagagc 124980 Score = 293 bits (148), Expect = 3e-76 Identities = 234/263 (88%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| ||||||||| | |||||||||||||||||||| Sbjct: 94624 ggtggatacctaggcacccagagacgaagaagggcgtggtaagcgacgaaatgcttcggg 94683 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | || Sbjct: 94684 gagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactacttg 94743 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 94744 ctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccagagg 94803 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 94804 aaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaaccg 94863 Query: 246 tgaaaacggggttgtgggagagc 268 |||| ||||||||||||||||| Sbjct: 94864 cgaaagcggggttgtgggagagc 94886 Score = 272 bits (137), Expect = 1e-69 Identities = 268/311 (86%), Gaps = 3/311 (0%) Strand = Plus / Minus Query: 285 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 344 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 345 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 404 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 405 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 464 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 524 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 525 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 584 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 585 actcataggca 595 ||| ||||||| Sbjct: 124666 acttataggca 124656 Score = 272 bits (137), Expect = 1e-69 Identities = 268/311 (86%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 285 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 344 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 345 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 404 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 405 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 464 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 465 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 524 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 525 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 584 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 585 actcataggca 595 ||| ||||||| Sbjct: 95200 acttataggca 95210
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 518 tgagctcccaagcagtgggaggggaaagtgatc 550 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 317 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 375 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 376 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 435 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 436 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 495 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 496 gaaatagaacgtgaaaccgtgctgagctcc 525 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 518 tgagctcccaagcagtgggaggggaaagtgatc 550 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 285 bits (144), Expect = 8e-74 Identities = 227/253 (89%), Gaps = 5/253 (1%) Strand = Plus / Plus Query: 339 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 398 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 399 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 458 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 459 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 518 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 519 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 578 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 579 ccggcgactcata 591 ||||||||||||| Sbjct: 608 ccggcgactcata 620 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 138 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 197 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 198 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 257 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 258 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 317 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 318 a 318 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 8e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 34 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 92 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 93 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 152 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 153 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 212 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 213 tagcggcgagcgaaatgggagcagcctaaacc 244 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434061 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 19434002 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 19434001 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 19433942 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 19433941 acaacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 538 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 579 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 456 taccgtgagggaaaggtgaaaagaacc 482 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51588 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 51529 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 51528 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 51469 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 51468 acaacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Minus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119552 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 119493 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 119492 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 119433 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 119432 acaacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 274 bits (138), Expect = 3e-70 Identities = 141/142 (99%) Strand = Plus / Plus Query: 29 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 acgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 6129 Query: 89 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 148 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 6130 ggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagag 6189 Query: 149 acaacctggcgaactgaaacat 170 |||||||||||||||||||||| Sbjct: 6190 acaacctggcgaactgaaacat 6211
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 268 bits (135), Expect = 2e-68 Identities = 181/194 (93%), Gaps = 2/194 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaa-tgcttcgg 64 |||||||||| |||||||||| |||||||||| |||||| ||||||||||| |||||||| Sbjct: 89860 ggtggataccaaggcacccagagacgaggaagagcgtagtaagcgacgaaaatgcttcgg 89801 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 |||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 89800 ggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc-t 89742 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89741 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 89682 Query: 185 gaaaagaaagcaaa 198 |||||||||||||| Sbjct: 89681 gaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 268 bits (135), Expect = 2e-68 Identities = 181/194 (93%), Gaps = 2/194 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaa-tgcttcgg 64 |||||||||| |||||||||| |||||||||| |||||| ||||||||||| |||||||| Sbjct: 410 ggtggataccaaggcacccagagacgaggaagagcgtagtaagcgacgaaaatgcttcgg 469 Query: 65 ggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcct 124 |||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| | Sbjct: 470 ggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc-t 528 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 529 gctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccagag 588 Query: 185 gaaaagaaagcaaa 198 |||||||||||||| Sbjct: 589 gaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 438 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 8e-68 Identities = 208/232 (89%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggca 606 Score = 186 bits (94), Expect = 6e-44 Identities = 202/239 (84%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| ||||||||| |||| ||||| |||||||||| || |||||||| ||| |||| Sbjct: 10 ggyggagacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccggg 69 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | | Sbjct: 70 aagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccg 129 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | ||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 130 ctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagagg 189 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 190 aaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 266 bits (134), Expect = 8e-68 Identities = 208/232 (89%), Gaps = 3/232 (1%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggca 115056 Score = 266 bits (134), Expect = 8e-68 Identities = 208/232 (89%), Gaps = 3/232 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggca 86932 Score = 198 bits (100), Expect = 1e-47 Identities = 204/239 (85%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| |||| ||||| |||||||||| || |||||||| ||| |||| Sbjct: 115653 ggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccggg 115594 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | | Sbjct: 115593 aagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccg 115534 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | ||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 115533 ctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagagg 115474 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115473 aaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 198 bits (100), Expect = 1e-47 Identities = 204/239 (85%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| |||| ||||| |||||||||| || |||||||| ||| |||| Sbjct: 86335 ggtggatacctaggcatccagagacgacgaagggcgtactaatcgacgaaacgctccggg 86394 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | | Sbjct: 86395 aagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctccg 86454 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| || || | ||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 86455 ctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccagagg 86514 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86515 aaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 258 bits (130), Expect = 2e-65 Identities = 136/138 (98%) Strand = Plus / Minus Query: 458 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 517 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 518 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 577 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 578 gccggcgactcataggca 595 |||||||||||||||||| Sbjct: 107930 gccggcgactcataggca 107913
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 248 bits (125), Expect = 2e-62 Identities = 206/230 (89%), Gaps = 6/230 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 | ||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 633 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 248 bits (125), Expect = 2e-62 Identities = 206/230 (89%), Gaps = 6/230 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 594 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 204 ttcccgtagtagcggcgagcgaa 226 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 242 bits (122), Expect = 1e-60 Identities = 226/261 (86%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| Sbjct: 83 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctg 142 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 143 taaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 202 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| Sbjct: 203 aataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccg 262 Query: 246 tgaaaacggggttgtgggaga 266 ||||| ||||||||||||||| Sbjct: 263 tgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 488 tgggtagtgaaatagaacgtgaaacc 513 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 609
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 242 bits (122), Expect = 1e-60 Identities = 209/237 (88%), Gaps = 1/237 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| || ||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 4056 ggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 4115 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| | Sbjct: 4116 gagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-g 4174 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||| || | |||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 4175 ctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagagg 4234 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4235 aaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 240 bits (121), Expect = 4e-60 Identities = 246/287 (85%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggca 4653
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 242 bits (122), Expect = 1e-60 Identities = 209/237 (88%), Gaps = 1/237 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| || ||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| | Sbjct: 83 gagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-g 141 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||||||| || | |||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 142 ctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccagagg 201 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 202 aaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 240 bits (121), Expect = 4e-60 Identities = 246/287 (85%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggca 620
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 292 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 351 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 352 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 411 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 412 accttgcaaggctaaatactcctgggtgaccga 444 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 240 bits (121), Expect = 4e-60 Identities = 246/287 (85%), Gaps = 3/287 (1%) Strand = Plus / Plus Query: 309 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 368 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 369 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 428 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 429 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 488 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 489 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 548 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 549 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggca 620 Score = 234 bits (118), Expect = 3e-58 Identities = 208/237 (87%), Gaps = 1/237 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| || ||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 |||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| | Sbjct: 83 gagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc-g 141 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| || | |||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 142 ctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccagagg 201 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 |||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 202 aaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 238 bits (120), Expect = 2e-59 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 623 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 99.6 bits (50), Expect = 1e-17 Identities = 92/107 (85%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggg 69 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 70 gagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 238 bits (120), Expect = 2e-59 Identities = 205/232 (88%), Gaps = 6/232 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | | | |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 2392 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 111 bits (56), Expect = 3e-21 Identities = 94/107 (87%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| ||||||||||| || |||||||| |||||||| Sbjct: 1776 ggtggatacctaggcacccagagacgatgaagggcgtagtaaccgacgaaacgcttcggg 1835 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1836 gagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 238 bits (120), Expect = 2e-59 Identities = 209/238 (87%), Gaps = 3/238 (1%) Strand = Plus / Plus Query: 358 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 417 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 418 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 477 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 478 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 537 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 538 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 || || | || ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 572 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 151 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 210 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 211 agtagcggcgagcgaaatgggagcagcctaaacc 244 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 54.0 bits (27), Expect = 5e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 23 ccagngacgaggaagggcgtagcaagcgacgaaatgcttcgg 64 |||| ||||| ||||||||||| ||||||||||| ||||||| Sbjct: 1 ccagagacgaagaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 234 bits (118), Expect = 3e-58 Identities = 207/236 (87%), Gaps = 3/236 (1%) Strand = Plus / Plus Query: 357 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 416 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 417 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 476 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 477 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 536 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 537 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatag 592 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatag 612 Score = 212 bits (107), Expect = 1e-51 Identities = 207/238 (86%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||| || ||| ||||| ||||||||||| ||||||||||| |||||||| Sbjct: 23 ggtggatacctaggtactcagagacgaagaagggcgtagtaagcgacgaaacgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct-tttaaactgcct 124 |||| ||||| | | ||||||||||||||||| ||| || |||| ||| |||||| Sbjct: 83 gagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgcc- 141 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| |||||| Sbjct: 142 gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccagag 201 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 242 ||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 202 gaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 311 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 370 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 371 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 430 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 431 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 490 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 491 gtagtgaaatagaacgtgaaa 511 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 196 bits (99), Expect = 6e-47 Identities = 218/254 (85%), Gaps = 3/254 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| || || ||||||| || || || ||||||||||||| Sbjct: 21 ggtggatacctaggcacccagggatgaagaagggcataataattgatgaaatgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||| ||| Sbjct: 81 gagttaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactg-ctg 139 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 || | |||||| |||| ||| ||| ||||||| |||||||| ||||||||||| |||||| Sbjct: 140 cttattccatg-gcagacaaaaga-aacctggtgaactgaatcatcttagtagacagagg 197 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| |||||||||| ||| || |||||| |||||| |||| |||| |||||||||||| Sbjct: 198 aaaataaagcaaaagttattaccatagtagtggcgagtgaaaagggaacagcctaaaccg 257 Query: 246 tgaaaacggggttg 259 |||| ||||||| Sbjct: 258 ctaaaatggggttg 271 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 ||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcata 607
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 176 bits (89), Expect = 5e-41 Identities = 202/240 (84%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||||| || ||||| ||||||||| | | |||||| | ||| |||| Sbjct: 10 ggtggatacctaggcacctagagacgaagaagggcgtcactaccgacgatacgctccggg 69 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||||| | ||||||||||||||| ||| || |||||| ||| |||| Sbjct: 70 gagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccctg 129 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| ||||| |||| |||| || |||||||||||||||||||||| |||| Sbjct: 130 ctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccggagg 189 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||||| Sbjct: 190 aaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaaccg 249
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 226 bits (114), Expect = 7e-56 Identities = 224/261 (85%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||| ||| Sbjct: 3057 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgctttggg 3116 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| |||| Sbjct: 3117 gagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacctg 3176 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 3177 taaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 3236 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| Sbjct: 3237 aataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccg 3296 Query: 246 tgaaaacggggttgtgggaga 266 ||||| ||||||||||||||| Sbjct: 3297 tgaaagcggggttgtgggaga 3317 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 488 tgggtagtgaaatagaacgtgaaacc 513 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 3643
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 222 bits (112), Expect = 1e-54 Identities = 222/259 (85%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| |||| ||||| ||||||||||| ||||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagagacgaagaagggcgtagtcagcgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 83 gagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacctg 142 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 143 tagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 202 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||||| Sbjct: 203 aaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaaccg 262 Query: 246 tgaaaacggggttgtggga 264 |||| ||||||||||||| Sbjct: 263 cgaaagcggggttgtggga 281 Score = 202 bits (102), Expect = 9e-49 Identities = 197/228 (86%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 488 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 547 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 548 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | || ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggca 609
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 165 bits (83), Expect = 2e-37 Identities = 200/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | ||| ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggtcgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 506 gtgaaa 511 ||||| Sbjct: 503 atgaaa 508 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||| ||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 193/226 (85%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 233 || |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 506 gtgaaa 511 ||||| Sbjct: 503 atgaaa 508 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 165 bits (83), Expect = 2e-37 Identities = 200/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| |||||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggcgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 149 bits (75), Expect = 1e-32 Identities = 198/234 (84%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||| ||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctagacacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 199/234 (85%), Gaps = 4/234 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 241 || |||||||||| |||||| |||||| ||||| ||||| |||| || ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 482 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 588 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 150 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 209 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 210 tagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 214 bits (108), Expect = 2e-52 Identities = 164/183 (89%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||| || |||||||| |||||||| Sbjct: 724 ggtggatacctaggcacccagagacgaagaagggcgtactaaccgacgaaacgcttcggg 783 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| |||| Sbjct: 784 gagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcctg 843 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 ctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccagagg 903 Query: 186 aaa 188 ||| Sbjct: 904 aaa 906
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 1e-51 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 188 bits (95), Expect = 1e-44 Identities = 206/241 (85%), Gaps = 3/241 (1%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||| |||| || |||| ||||||||||| ||||||||||||||||||| Sbjct: 426 ggtggatacctagacacctagaaacgatgaagggcgtagaaagcgacgaaatgcttcggt 485 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 | || || ||| || | |||||||||||| |||||| |||||| | ||||||| || Sbjct: 486 taactgcgaacaag--taaacccggagattcccgaatagggcaacctgt-aaactgcttg 542 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||||| ||| || | |||||||||||||| ||||||||||||||||||| ||||||| Sbjct: 543 ctgaattcataggcgagtaagagacaacctggtgaactgaaacatcttagtaaccagagg 602 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || |||||||||||||||||||| |||||| ||||||||||| |||| |||||||||||| Sbjct: 603 aacagaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaaccg 662 Query: 246 t 246 | Sbjct: 663 t 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 1e-51 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 544 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 204 ttcccgtagtagcggcgagcgaaatggga 232 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccg 514 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 49 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 108 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 109 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 168 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 169 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 228 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 229 gggagcagcctaaacc 244 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 326 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 385 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 386 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 445 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 446 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 505 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 506 gtgaaa 511 ||||| Sbjct: 504 atgaaa 509 Score = 157 bits (79), Expect = 5e-35 Identities = 193/226 (85%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 |||||||||||||||||| | || ||||||| || || || |||||||||||||||| Sbjct: 24 ggatacctaggcacccagggttgaagaagggcataataattgatgaaatgcttcggggag 83 Query: 69 ttgaaaa-taagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 127 || |||| ||| ||||||||||||||||||| ||||||| ||||||| ||||||| |||| Sbjct: 84 ttaaaaaataaacatagatccggagattcccgaataggtaaacctttaaaactgc-tgct 142 Query: 128 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 187 | |||||| | || ||||||| |||| || ||||||||||||||||||| ||||||||| Sbjct: 143 tattccatg-gaagacaagaga-aacccggtgaactgaaacatcttagtatccagaggaa 200 Query: 188 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggag 233 || |||||||||| |||||| |||||| ||||| ||||| ||||| Sbjct: 201 aataaagcaaaagttattcccatagtagtggcgaacgaaaagggag 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 550 ctctgaccgcgtgcctgttgaagaatgagccggcgactcata 591 |||||||||||||| || |||||||||||||||| ||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 155 bits (78), Expect = 2e-34 Identities = 198/239 (82%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| |||||||| | | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgaagaagggcgcaaataccggcgaaacgcttcggg 62 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || ||| ||| | |||||| |||| ||| |||||| |||||| | ||| ||| Sbjct: 63 gagctggcaatgagctttgatccgaagatccccgaatagggcaacctctagcactacctc 122 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 | ||| ||| | |||||||||| |||| || |||||||||||||| ||||||| |||| Sbjct: 123 cataattcatagggaggcaagagagaacccggtgaactgaaacatctaagtagccggagg 182 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 183 aaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 223 cgaaatgggagcagcctaaacc 244 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcgact 587 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/107 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| |||||||| || | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgatgaagggcgcagataccggcgaaacgcttcggg 62 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 63 gagctggcaacaagctttgatccgaagatccccgaatagggcaacct 109
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 206 bits (104), Expect = 6e-50 Identities = 220/259 (84%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| |||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagagacgaagaagggcgtagtaagcgacgaaatgcttcggg 1849 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| |||| Sbjct: 1850 gagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacctg 1909 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||||| Sbjct: 1910 tataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctagagg 1969 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 || | |||||||||||||||||| |||||| ||||||||||| |||| | |||||||||| Sbjct: 1970 aataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaaccg 2029 Query: 246 tgaaaacggggttgtggga 264 | ||| ||||||||||||| Sbjct: 2030 ttaaagcggggttgtggga 2048 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 368 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 427 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 428 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 487 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 488 tgggtagtgaaatagaacgtgaaacc 513 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 202 bits (102), Expect = 9e-49 Identities = 202/232 (87%), Gaps = 10/232 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 541 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 | | || | |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 659 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/63 (84%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| |||||||| || | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgaagaagggcgcagataccggcgaaacgcttcggg 62 Query: 66 gag 68 ||| Sbjct: 63 gag 65
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 363 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 422 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 423 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 483 cc 484 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 142 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 201 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 202 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 83.8 bits (42), Expect = 6e-13 Identities = 77/89 (86%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||||||||||||| | || ||||||||||||||| | | ||||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagagacgaggaagggcgtggttaccgacgaaatgcttcggg 82 Query: 66 gagttgaaaataagcatagatccggagat 94 |||||| ||| | || |||||||||||| Sbjct: 83 gagttggaaagaggctgagatccggagat 111 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 554 gaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||||||||||||||||||||||||||||||| ||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggca 603
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 223 cgaaatgggagcagcctaaacc 244 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 786 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/36 (88%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcg 41 || ||| |||||||||||||| ||||| |||||||| Sbjct: 3 ggyggagacctaggcacccagagacgatgaagggcg 38
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 219 cgagcgaaatgggagcagcctaaac 243 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 621 Score = 63.9 bits (32), Expect = 6e-07 Identities = 88/107 (82%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 81 gagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 675 Score = 63.9 bits (32), Expect = 6e-07 Identities = 88/107 (82%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 81 gagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 223 cgaaatgggagcagcctaaacc 244 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Minus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 151766 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 42437 Score = 56.0 bits (28), Expect = 1e-04 Identities = 87/107 (81%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 152360 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 152301 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 152300 gagctggcaacaagctttgatccgaagattcccgaatagggcaacct 152254 Score = 56.0 bits (28), Expect = 1e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 41843 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 41902 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 41903 gagctggcaacaagctttgatccgaagattcccgaatagggcaacct 41949
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 675 Score = 63.9 bits (32), Expect = 6e-07 Identities = 88/107 (82%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 81 gagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 219 cgagcgaaatgggagcagcctaaac 243 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 621 Score = 63.9 bits (32), Expect = 6e-07 Identities = 88/107 (82%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 81 gagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 609 Score = 56.0 bits (28), Expect = 1e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 15 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 74 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 75 gagctggcaacaagctttgatccgaagattcccgaatagggcaacct 121
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 694 Score = 56.0 bits (28), Expect = 1e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 100 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 159 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 160 gagctggcaacaagctttgatccgaagattcccgaatagggcaacct 206
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 367 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 426 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 427 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 486 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 487 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 546 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 547 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 6e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 141 bits (71), Expect = 3e-30 Identities = 197/240 (82%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| |||||||| || | || ||| | ||| |||| Sbjct: 3 ggyggagacctaggcacccagagacgatgaagggcgcagataccggcgatacgctccggg 62 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || |||| | ||||||||||| ||| |||||| ||||| || |||| ||| Sbjct: 63 gagctggcaacaagctttgatccggagatccccgaatagggcaaccacttgaactaccta 122 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||| ||| ||| ||||| ||||| || ||| |||||||||||||||||| |||| Sbjct: 123 tataattcatagttaggtaagaggcaacccggtgaattgaaacatcttagtagccggagg 182 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 183 aaaagaaagcaaaagcgattcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 97.6 bits (49), Expect = 4e-17 Identities = 87/100 (87%) Strand = Plus / Plus Query: 13 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 72 |||||||||||||| ||||| ||||||||| | || |||||||| ||||||||||| || Sbjct: 9 acctaggcacccagagacgatgaagggcgtggaaaccgacgaaacgcttcggggagctgg 68 Query: 73 aaataagcatagatccggagattcccaaataggtcaacct 112 ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 69 aaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 472 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 531 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 532 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 581 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/104 (86%), Gaps = 1/104 (0%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 ||||||||||||||| || ||||| ||||||||| | || |||||||| ||||||||||| Sbjct: 24815 ggatacctaggcacctagagacgatgaagggcgtgg-aaccgacgaaacgcttcggggag 24873 Query: 69 ttgaaaataagcatagatccggagattcccaaataggtcaacct 112 || ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 24874 ctggaaacaagcaatgatccggagattcccgaatagggcaacct 24917 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 367 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 426 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 427 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 486 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 487 gtgggtagtgaaatagaacgtgaaaccgt 515 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 560 gtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 424 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 540 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 115 bits (58), Expect = 2e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||||| |||||| | Sbjct: 21 ggtggagacctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcgag 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || |||| | |||||| |||| ||| |||||| |||||| | ||||| || Sbjct: 81 gagctggcaacaagctttgatccgaagatccccgaatagggcaacctgtaaaacttccaa 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 | |||| ||| | || ||||| ||||| | ||| ||||||||||||||||| |||| Sbjct: 141 cagaattcatatgttggaaagaggcaacccagtgaattgaaacatcttagtagctggagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 226 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 201 aaaagaaagcaaacgcgattcccgtagtagcggcgagcgaa 241
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 192 bits (97), Expect = 9e-46 Identities = 200/232 (86%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 541 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||| || |||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagg 612 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 13 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 72 |||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 87 Query: 73 aaataagcatagatccggagattcccaaataggtcaacct 112 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 88 caacaagctttgatccgaagatccccgaatagggcaacct 127
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 424 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 540 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 163 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 222 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 223 cgaa 226 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 542 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 543 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 424 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 482 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 540 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 541 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 587 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 115 bits (58), Expect = 2e-22 Identities = 180/221 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||||| |||||| | Sbjct: 21 ggtggagacctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcgag 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || |||| | |||||| |||| ||| |||||| |||||| | ||||| || Sbjct: 81 gagctggcaacaagctttgatccgaagatccccgaatagggcaacctgtaaaacttccaa 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 | |||| ||| | || ||||| ||||| | ||| ||||||||||||||||| |||| Sbjct: 141 cagaattcatatgttggaaagaggcaacccagtgaattgaaacatcttagtagctggagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 226 ||||||||||||| ||||||||||||||||||||||||||| Sbjct: 201 aaaagaaagcaaacgcgattcccgtagtagcggcgagcgaa 241
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 192 bits (97), Expect = 9e-46 Identities = 200/232 (86%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 541 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||| || |||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagg 612 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261 Score = 50.1 bits (25), Expect = 0.008 Identities = 81/100 (81%) Strand = Plus / Plus Query: 13 acctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggagttga 72 |||||||||| ||| ||||| |||||||| || | || ||||| ||||||||||| || Sbjct: 28 acctaggcactcagagacgatgaagggcgcagataccggcgaaacgcttcggggagctgg 87 Query: 73 aaataagcatagatccggagattcccaaataggtcaacct 112 || |||| | |||||| |||| ||| |||||| |||||| Sbjct: 88 caacaagctttgatccgaagatccccgaatagggcaacct 127
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 190 bits (96), Expect = 4e-45 Identities = 200/232 (86%), Gaps = 12/232 (5%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 483 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 || ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 155612 Score = 190 bits (96), Expect = 4e-45 Identities = 200/232 (86%), Gaps = 12/232 (5%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 483 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 541 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 542 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 || ||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 78280 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 60.0 bits (30), Expect = 9e-06 Identities = 92/113 (81%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 156279 ggtggagacctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggg 156220 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 118 ||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 156219 gagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 156167 Score = 60.0 bits (30), Expect = 9e-06 Identities = 92/113 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 77613 ggtggagacctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggg 77672 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaa 118 ||| || || |||||| |||||| |||| ||| |||||| |||||| ||||| Sbjct: 77673 gagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaaa 77725
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttatagg 618 Score = 60.0 bits (30), Expect = 9e-06 Identities = 87/107 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 3 ggyggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 62 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 63 gagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||| |||||||||||||||||||||||||||||| ||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttatagg 626 Score = 56.0 bits (28), Expect = 1e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgaagaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| | |||||| |||||||| |||||| |||||| Sbjct: 81 gagctggcaacaagctttgatccgaagattcccgaatagggcaacct 127
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 188 bits (95), Expect = 1e-44 Identities = 205/240 (85%), Gaps = 2/240 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||| ||| ||||| ||||||||| | || | ||||||||||||||| Sbjct: 10 ggyggagacctaggcactcagagacgaagaagggcgtggaaaccaacgaaatgcttcggg 69 Query: 66 gagttgaaaataagc-atagatccggagattcccaaataggtcaaccttttaaactgcct 124 ||| || ||| |||| ||| |||||||||||||| |||||| |||||| || ||| ||| Sbjct: 70 gagctggaaacaagctata-atccggagattcccgaatagggcaacctcttgtactacct 128 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 ||||| ||| ||| ||||||||||| || ||| |||||||||||||||||| ||| Sbjct: 129 attgaattcatagataggaaagagacaacccggtgaattgaaacatcttagtagccggag 188 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 248 Score = 153 bits (77), Expect = 8e-34 Identities = 135/153 (88%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 377 cccgagtagcatgggacacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 436 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 482 |||||||||||| |||||| |||||||| |||||||| |||||||||||| ||||||||| Sbjct: 437 taaatactcctgagtgaccaatagcgaaatagtaccgcgagggaaaggtgaaaaagaacc 496 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgt 515 || ||| ||||||| ||||| ||||||||| Sbjct: 497 cctgtaggggagtgaaaaagaacatgaaaccgt 529 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatag 592 ||||||||| ||||||||||||||||||||||||| |||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatag 605
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 95.6 bits (48), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||||||| |||||||| || |||| Sbjct: 171496 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 171437 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171436 gagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 95.6 bits (48), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||||||| |||||||| || |||| Sbjct: 121430 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 121489 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121490 gagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 539 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 95.6 bits (48), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||| |||||||||||||| |||||||| || |||| Sbjct: 21 ggtggatacctaggcacccagagacgaagaagggcgtagcaaccgacgaaaccctccggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 ||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 81 gagctggaagcaagctctgatccggagattcccgaatagggcaacct 127 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 482 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 483 cccagtgggtagtgaaatagaacgtgaaaccgt 515 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 151 bits (76), Expect = 3e-33 Identities = 201/241 (83%), Gaps = 2/241 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||| ||| ||||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcactcagagacgatgaagggcgtggtaaccgacgaaacgcttcggg 69 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || | | ||| | |||||| |||||||| |||||| |||||| || ||| | | Sbjct: 70 gagctggatacgagctttgatccgaagattcccgaatagggcaacctcttggactcctta 129 Query: 126 ctgaatccatgagc-aggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 ||||| ||| ||| | | |||||| |||| || ||| ||||||||||||||| || ||| Sbjct: 130 gtgaattcat-agctaagaaagagataacccggtgaattgaaacatcttagtaaccggag 188 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 189 gaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaatgggaacagcctaaacc 248 Query: 245 g 245 | Sbjct: 249 g 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 482 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 483 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 539 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 540 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 123 bits (62), Expect = 7e-25 Identities = 195/239 (81%), Gaps = 1/239 (0%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| ||||||||||| | ||||| |||||||| || | || ||||| |||||||| Sbjct: 3 ggyggagacctaggcacctaaagacgatgaagggcgcagataccggcgaaacgcttcggg 62 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacctttta-aactgcct 124 ||| || || |||||| |||||| |||| ||| |||||| |||||| ||| ||||||| Sbjct: 63 gagctggcaacaagcatcgatccgaagatccccgaatagggcaacctcttagaactgccc 122 Query: 125 gctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagag 184 |||||| ||| | || |||| |||| ||||| ||||||||||||||||| || Sbjct: 123 actgaattcataggtgggtcagaggcaactcagcgaattgaaacatcttagtagctgaag 182 Query: 185 gaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 243 |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| Sbjct: 183 gaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgt 515 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 170 bits (86), Expect = 3e-39 Identities = 199/237 (83%) Strand = Plus / Plus Query: 9 ggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggggag 68 ||||||||||| || ||| | ||| ||||||||||| | |||||| | ||||||||||| Sbjct: 13 ggatacctagggactcagagtcgatgaagggcgtagttaccgacgatacgcttcggggag 72 Query: 69 ttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctg 128 || || |||| | |||||| |||||||| |||||| ||||||| || ||| |||| || Sbjct: 73 ctggaatcaagctttgatccgaagattcccgaatagggcaaccttatatacttcctgttg 132 Query: 129 aatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaa 188 ||| ||| |||| ||||||||||| |||||| |||||||||||||||||| | ||||| Sbjct: 133 aattcatagacaggtaagagacaacccggcgaattgaaacatcttagtagccggtggaaa 192 Query: 189 agaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 |||||||||| ||||||||| |||||| ||||||||||| |||| ||| |||||||| Sbjct: 193 agaaagcaaacgcgattcccttagtagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 600
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 180 bits (91), Expect = 3e-42 Identities = 199/231 (86%), Gaps = 8/231 (3%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 543 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 544 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 ||| | || ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttatagg 790 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 145 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 204 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 205 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 111 bits (56), Expect = 3e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 81 gagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactaccta 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| |||| Sbjct: 141 tataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 201 aaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 623
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 159 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 218 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 219 cgagcgaaatgggagcagcctaaacc 244 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgact 587 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>gb|AF141148.1|AF141148 Vigna unguiculata clone VU53KNF3-2 16S ribsomal RNA gene; partial sequence, tRNA-Ile gene; complete sequence, and 18S ribosomal RNA gene; partial sequence; chloroplast genes for chloroplast products Length = 387 Score = 178 bits (90), Expect = 1e-41 Identities = 121/129 (93%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 136 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 77 Query: 66 gagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcct 124 ||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| || Sbjct: 76 gagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-ct 18 Query: 125 gctgaatcc 133 ||||||||| Sbjct: 17 gctgaatcc 9
>gb|AF142335.1|AF142335 Vigna vexillata clone TVBA27 putative ribosomal RNA genomic sequence Length = 383 Score = 178 bits (90), Expect = 1e-41 Identities = 121/129 (93%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 130 ggtggatacctaggcacccagagacgaggaagggcgtagtaagcgacgaaatgcttcggg 71 Query: 66 gagttgaaaataagcatagatccggagattccc-aaataggtcaaccttttaaactgcct 124 ||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||| || Sbjct: 70 gagttgaaaataagcgtagatccggagattcccgatataggtcaacctttcgaactg-ct 12 Query: 125 gctgaatcc 133 ||||||||| Sbjct: 11 gctgaatcc 3
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 484 ccagtgggtagtgaaatagaacgtgaaacc 513 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 111 bits (56), Expect = 3e-21 Identities = 193/239 (80%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 |||||| |||||||||| ||| ||||| |||||||| || | || ||| | |||||||| Sbjct: 21 ggtggagacctaggcactcagagacgatgaagggcgcagataccggcgatacgcttcggg 80 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 125 ||| || || |||| | ||||||||||||||| |||||| |||||| | ||||| ||| Sbjct: 81 gagctggcaacaagctttgatccggagattcccgaatagggcaacctataaaactaccta 140 Query: 126 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 185 ||| ||| ||| ||||| ||||| | |||||||||||||| |||||| |||| Sbjct: 141 tataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagtagctggagg 200 Query: 186 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 244 ||||||||||||| |||||||||||||||| ||||| |||| |||| |||||||||| Sbjct: 201 aaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagcctaaacc 259 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 552 ctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 623
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 367 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 426 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 427 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 486 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 487 gtgggtagtgaaatagaacgtgaaaccgt 515 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 551 tctgaccgcgtgcctgttgaagaatgagccggcga 585 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 484 ccagt-gggtagtgaaatagaacgtgaaaccgt 515 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 144 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 203 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 204 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 245 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 1e-10 Identities = 89/107 (83%) Strand = Plus / Plus Query: 6 ggtggatacctaggcacccagngacgaggaagggcgtagcaagcgacgaaatgcttcggg 65 || ||| |||||||||||||| ||||| ||||||||| | || |||||||| |||||||| Sbjct: 10 ggyggagacctaggcacccagagacgaagaagggcgtggaaaccgacgaaacgcttcggg 69 Query: 66 gagttgaaaataagcatagatccggagattcccaaataggtcaacct 112 || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 70 aagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgact 587 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 160 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 219 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 220 gagcgaaatgggagcagcctaaacc 244 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 593 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 364 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 423 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 424 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 483 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 484 ccagtgggtagtgaaatagaacgtgaaaccgtg 516 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 157 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 216 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 217 ggcgagcgaaatgggagcagcctaaacc 244 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 553 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 595 |||||| |||||||||||||||||||||||||||| ||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggca 460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,039,388 Number of Sequences: 3902068 Number of extensions: 4039388 Number of successful extensions: 120614 Number of sequences better than 10.0: 26620 Number of HSP's better than 10.0 without gapping: 26447 Number of HSP's successfully gapped in prelim test: 208 Number of HSP's that attempted gapping in prelim test: 76325 Number of HSP's gapped (non-prelim): 42293 length of query: 595 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 572 effective length of database: 17,143,297,704 effective search space: 9805966286688 effective search space used: 9805966286688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
