ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd14m01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1104 bits (557), Expect = 0.0 Identities = 560/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120026 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119967 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119966 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 119907 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119906 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 119847 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119846 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 119787 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119786 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 119727 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119726 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 119667 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119666 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 119607 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119606 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 119547 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119546 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 119487 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 119486 aagaatgagccggcgactcat 119466 Score = 1104 bits (557), Expect = 0.0 Identities = 560/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94868 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 94927 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94928 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 94987 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94988 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 95047 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95048 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 95107 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95108 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 95167 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95168 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 95227 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95228 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 95287 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95288 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 95347 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95348 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 95407 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 95408 aagaatgagccggcgactcat 95428
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118807 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 118748 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 118747 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 118688 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118687 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 118628 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118627 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 118568 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118567 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 118508 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 118507 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 118448 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118447 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 118388 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118387 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 118328 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118327 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 118268 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 118267 aagaatgagccggcgactcat 118247
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 878 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 877 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 818 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 758 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 698 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 697 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 638 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 637 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 578 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 577 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 518 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 458 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 398 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 397 aagaatgagccggcgactcat 377
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119891 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119832 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119831 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 119772 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119771 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 119712 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119711 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 119652 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119651 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 119592 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119591 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 119532 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119531 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 119472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 119412 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119411 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 119352 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 119351 aagaatgagccggcgactcat 119331 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95265 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 95324 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95325 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 95384 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 95444 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95445 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 95504 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95505 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 95564 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95565 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 95624 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 95684 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 95744 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 95804 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 95805 aagaatgagccggcgactcat 95825
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119891 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119832 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119831 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 119772 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119771 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 119712 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119711 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 119652 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119651 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 119592 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119591 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 119532 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119531 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 119472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 119412 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119411 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 119352 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 119351 aagaatgagccggcgactcat 119331 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95265 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 95324 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95325 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 95384 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 95444 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95445 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 95504 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95505 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 95564 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95565 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 95624 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 95684 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 95744 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95745 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 95804 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 95805 aagaatgagccggcgactcat 95825
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119840 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119781 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119780 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 119721 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119720 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 119661 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119660 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 119601 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119600 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 119541 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119540 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 119481 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119480 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 119421 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119420 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 119361 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119360 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 119301 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 119300 aagaatgagccggcgactcat 119280 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95210 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 95269 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95270 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 95329 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95330 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 95389 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95390 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 95449 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95450 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 95509 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95510 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 95569 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95570 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 95629 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95630 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 95689 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95690 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 95749 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 95750 aagaatgagccggcgactcat 95770
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507843 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 31507902 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 31507903 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 31507962 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507963 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 31508022 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508023 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 31508082 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508083 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 31508142 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 31508143 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 31508202 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508203 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 31508262 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508263 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 31508322 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508323 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 31508382 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 31508383 aagaatgagccggcgactcat 31508403
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84753 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 84694 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 84693 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 84634 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84633 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 84574 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84573 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 84514 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84513 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 84454 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 84453 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 84394 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84393 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 84334 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84333 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 84274 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84273 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 84214 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 84213 aagaatgagccggcgactcat 84193
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119860 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119801 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119800 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 119741 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119740 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 119681 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119680 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 119621 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119620 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 119561 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119560 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 119501 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119500 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 119441 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119440 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 119381 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119380 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 119321 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 119320 aagaatgagccggcgactcat 119300 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95258 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 95317 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95318 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 95377 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95378 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 95437 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95438 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 95497 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95498 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 95557 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95558 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 95617 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95618 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 95677 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95678 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 95737 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95738 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 95797 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 95798 aagaatgagccggcgactcat 95818
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122307 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 122366 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122367 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 122426 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122427 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 122486 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122487 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 122546 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122547 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 122606 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 122607 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 122666 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122667 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 122726 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122727 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 122786 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122787 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 122846 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 122847 aagaatgagccggcgactcat 122867 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14032 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 14091 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14092 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 14151 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14152 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 14211 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14212 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 14271 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14272 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 14331 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 14332 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 14391 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14392 cctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 14451 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14452 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 14511 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14512 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 14571 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 14572 aagaatgagccggcgactcat 14592
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44851 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 44792 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 44791 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 44732 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44731 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 44672 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44671 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 44612 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44611 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 44552 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 44551 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 44492 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44491 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 44432 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44431 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 44372 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44371 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 44312 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 44311 aagaatgagccggcgactcat 44291 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20267 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 20326 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20327 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 20386 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20387 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 20446 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20447 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 20506 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20507 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 20566 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20567 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 20626 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20627 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 20686 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20687 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 20746 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20747 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 20806 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 20807 aagaatgagccggcgactcat 20827
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58579 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 58520 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58519 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 58460 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58459 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 58400 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58399 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 58340 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58339 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 58280 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 58279 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 58220 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58219 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 58160 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58159 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 58100 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58099 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 58040 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 58039 aagaatgagccggcgactcat 58019
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1480 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 1421 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1420 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 1361 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1360 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 1301 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1300 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 1241 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1240 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 1181 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1180 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 1121 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1120 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 1061 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 1001 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 941 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 940 aagaatgagccggcgactcat 920
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268192 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 9268251 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9268252 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 9268311 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268312 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 9268371 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268372 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 9268431 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268432 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 9268491 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9268492 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 9268551 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268552 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 9268611 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268612 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 9268671 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268672 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 9268731 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 9268732 aagaatgagccggcgactcat 9268752 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227692 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 9227751 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9227752 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 9227811 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227812 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 9227871 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227872 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 9227931 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227932 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 9227991 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9227992 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 9228051 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228052 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 9228111 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228112 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 9228171 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228172 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 9228231 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 9228232 aagaatgagccggcgactcat 9228252 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164281 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 9164340 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9164341 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 9164400 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164401 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 9164460 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164461 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 9164520 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164521 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 9164580 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9164581 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 9164640 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164641 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 9164700 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164701 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 9164760 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164761 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 9164820 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 9164821 aagaatgagccggcgactcat 9164841 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056106 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 9056165 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9056166 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 9056225 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056226 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 9056285 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056286 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 9056345 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056346 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 9056405 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9056406 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 9056465 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056466 cctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 9056525 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056526 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 9056585 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056586 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 9056645 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 9056646 aagaatgagccggcgactcat 9056666 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 407 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 466 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 467 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938177 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 19938236 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19938237 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 19938296 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938297 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 19938356 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938357 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 19938416 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938417 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 19938476 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19938477 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 19938536 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938537 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 19938596 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938597 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 19938656 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938657 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 19938716 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 19938717 aagaatgagccggcgactcat 19938737 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277254 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 10277195 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10277194 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 10277135 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277134 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 10277075 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277074 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 10277015 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277014 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 10276955 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10276954 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 10276895 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276894 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 10276835 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276834 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 10276775 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276774 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 10276715 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 10276714 aagaatgagccggcgactcat 10276694 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387044 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 10387103 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10387104 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 10387163 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 10387223 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387224 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 10387283 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387284 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 10387343 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10387344 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 10387403 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387404 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 10387463 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10387464 aagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtga 10387523 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387524 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 10387583 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 10387584 aagaatgagccggcgactcat 10387604 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 425 agtaccgtgagggaaaggtgaaaagaacccc 455 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttgtgctgctaggcgaagcggttgagtgc 278 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598359 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 31598418 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 31598419 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 31598478 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598479 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 31598538 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598539 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 31598598 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598599 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 31598658 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 31598659 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 31598718 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598719 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 31598778 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598779 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 31598838 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598839 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 31598898 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 31598899 aagaatgagccggcgactcat 31598919
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525675 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 33525734 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 33525735 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 33525794 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525795 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 33525854 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525855 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 33525914 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525915 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 33525974 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 33525975 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 33526034 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526035 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 33526094 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526095 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 33526154 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526155 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 33526214 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 33526215 aagaatgagccggcgactcat 33526235 Score = 248 bits (125), Expect = 2e-62 Identities = 131/133 (98%) Strand = Plus / Minus Query: 429 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 488 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 489 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 548 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 549 gccggcgactcat 561 ||||||||||||| Sbjct: 16677981 gccggcgactcat 16677969 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 443 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 502 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 503 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 552 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 436 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 474 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttc 33 ||||| ||||| ||||||||||||||||||||| Sbjct: 19455164 cgaggtagggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47866 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 47807 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 47806 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 47747 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47746 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 47687 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47686 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 47627 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47626 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 47567 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 47566 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 47507 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47506 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 47447 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47446 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 47387 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47386 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 47327 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 47326 aagaatgagccggcgactcat 47306
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70872 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 70931 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 70932 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 70991 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70992 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 71051 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71052 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 71111 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71112 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 71171 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 71172 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 71231 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71232 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 71291 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71292 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 71351 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71352 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 71411 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 71412 aagaatgagccggcgactcat 71432 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123690 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 123631 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123630 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 123571 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123570 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 123511 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123510 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 123451 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123450 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 123391 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 123390 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 123331 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123330 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 123271 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123270 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 123211 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123210 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 123151 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 123150 aagaatgagccggcgactcat 123130 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99147 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 99206 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99207 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 99266 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99267 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 99326 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99327 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 99386 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99387 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 99446 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99447 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 99506 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99507 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 99566 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99567 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 99626 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99627 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 99686 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 99687 aagaatgagccggcgactcat 99707
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 163 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 283 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 343 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 344 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 403 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 463 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 523 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 583 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 584 aagaatgagccggcgactcat 604
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 100 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 101 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 160 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 220 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 280 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 340 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 341 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 400 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 401 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 460 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 520 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 580 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 581 aagaatgagccggcgactcat 601
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949453 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 19949512 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19949513 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 19949572 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949573 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 19949632 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949633 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 19949692 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949693 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 19949752 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19949753 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 19949812 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949813 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 19949872 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949873 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 19949932 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949933 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 19949992 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 19949993 aagaatgagccggcgactcat 19950013 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283293 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 10283234 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10283233 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 10283174 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283173 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 10283114 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283113 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 10283054 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283053 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 10282994 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10282993 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 10282934 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282933 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 10282874 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282873 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 10282814 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282813 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 10282754 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 10282753 aagaatgagccggcgactcat 10282733 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393083 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 10393142 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10393143 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 10393202 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393203 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 10393262 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393263 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 10393322 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393323 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 10393382 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10393383 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 10393442 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393443 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 10393502 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 10393503 aagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtga 10393562 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393563 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 10393622 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 10393623 aagaatgagccggcgactcat 10393643 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 1.9 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttgtgctgctaggcgaagcggttgagtgc 278 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124407 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 124348 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124347 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 124288 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124287 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 124228 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124227 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 124168 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124167 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 124108 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 124107 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 124048 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124047 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 123988 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123987 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 123928 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123927 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 123868 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 123867 aagaatgagccggcgactcat 123847 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99824 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 99883 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 99884 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 99943 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99944 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 100003 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100004 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 100063 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100064 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 100123 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 100124 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 100183 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100184 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 100243 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100244 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 100303 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100304 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 100363 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 100364 aagaatgagccggcgactcat 100384
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119834 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119775 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119774 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 119715 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119714 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 119655 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119654 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 119595 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119594 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 119535 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119534 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 119475 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119474 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 119415 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119414 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 119355 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119354 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 119295 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 119294 aagaatgagccggcgactcat 119274 Score = 1096 bits (553), Expect = 0.0 Identities = 559/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95205 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 95264 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95265 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 95324 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95325 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 95384 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95385 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 95444 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95445 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 95504 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 95505 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 95564 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95565 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 95624 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95625 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 95684 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95685 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 95744 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 95745 aagaatgagccggcgactcat 95765
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140840 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 140899 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 140900 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 140959 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140960 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 141019 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141020 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 141079 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141080 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 141139 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 141140 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 141199 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141200 cctgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 141259 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141260 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 141319 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141320 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 141379 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 141380 aagaatgagccggcgactcat 141400
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93436 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 93495 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93496 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 93555 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93556 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 93615 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93616 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 93675 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93676 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 93735 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 93736 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 93795 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93796 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 93855 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 93856 aagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtga 93915 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93916 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 93975 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 93976 aagaatgagccggcgactcat 93996
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1088 bits (549), Expect = 0.0 Identities = 558/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27500 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 27559 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 27560 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 27619 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27620 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 27679 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27680 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 27739 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27740 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 27799 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 27800 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 27859 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27860 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 27919 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 27920 aagtagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtga 27979 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27980 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 28039 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 28040 aagaatgagccggcgactcat 28060
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1080 bits (545), Expect = 0.0 Identities = 557/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9242089 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 9242030 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9242029 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 9241970 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241969 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 9241910 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241909 tagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 9241850 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241849 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 9241790 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 9241789 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 9241730 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241729 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 9241670 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241669 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 9241610 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241609 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 9241550 Query: 541 aagaatgagccggcgactcat 561 |||||||||| |||||||||| Sbjct: 9241549 aagaatgagctggcgactcat 9241529 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 132 actgaaacatcttagtagccagaggaaaagaaag 165 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1080 bits (545), Expect = 0.0 Identities = 557/561 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53302 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 53243 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 53242 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 53183 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53182 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 53123 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53122 tagtagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 53063 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53062 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 53003 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 53002 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 52943 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52942 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 52883 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52882 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 52823 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52822 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 52763 Query: 541 aagaatgagccggcgactcat 561 |||||||||| |||||||||| Sbjct: 52762 aagaatgagctggcgactcat 52742
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1080 bits (545), Expect = 0.0 Identities = 557/561 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 61 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 120 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 301 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 360 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 481 aaccgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttg 540 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 541 aagaatgagccggcgactcat 561
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1035 bits (522), Expect = 0.0 Identities = 554/562 (98%), Gaps = 2/562 (0%) Strand = Plus / Minus Query: 1 cgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 59 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123630 cgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 123571 Query: 60 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 123570 ggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagag 123511 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123510 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 123451 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 123450 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagc 123391 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 123390 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagt 123331 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 123330 ccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaa 123272 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123271 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 123212 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123211 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 123152 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123151 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 123092 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 123091 gaagaatgagccggcgactcat 123070 Score = 1035 bits (522), Expect = 0.0 Identities = 554/562 (98%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 1 cgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 59 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99107 cgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 99166 Query: 60 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 99167 ggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagag 99226 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99227 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 99286 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 99287 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagc 99346 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 99347 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagt 99406 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 99407 ccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaa 99465 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99466 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 99525 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99526 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 99585 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99586 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 99645 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 99646 gaagaatgagccggcgactcat 99667
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1035 bits (522), Expect = 0.0 Identities = 554/562 (98%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 1 cgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 59 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5460 cgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 5519 Query: 60 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 5520 ggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagag 5579 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5580 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 5639 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5640 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagc 5699 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5700 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagt 5759 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 5760 ccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaa 5818 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5819 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 5878 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5879 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 5938 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5939 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 5998 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 5999 gaagaatgagccggcgactcat 6020
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1035 bits (522), Expect = 0.0 Identities = 554/562 (98%), Gaps = 2/562 (0%) Strand = Plus / Plus Query: 1 cgaggaag-ggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 59 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 cgaggaagaggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatcc 107 Query: 60 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 108 ggagattcccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagag 167 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 227 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 228 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagc 287 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 288 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagt 347 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 348 ccagtagccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaa 406 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 466 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 526 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 586 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 587 gaagaatgagccggcgactcat 608
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 997 bits (503), Expect = 0.0 Identities = 509/511 (99%) Strand = Plus / Plus Query: 51 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 110 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 111 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 171 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 231 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 291 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 350 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 351 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 411 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 471 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgc 480 Query: 531 gtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||| Sbjct: 481 gtgcctgttgaagaatgagccggcgactcat 511
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 981 bits (495), Expect = 0.0 Identities = 504/507 (99%) Strand = Plus / Plus Query: 55 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 114 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 235 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 295 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 354 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 355 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 415 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 475 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 480 Query: 535 ctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||| Sbjct: 481 ctgttgaagaatgagccggcgactcat 507
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 932 bits (470), Expect = 0.0 Identities = 473/474 (99%) Strand = Plus / Plus Query: 88 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 148 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 208 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 268 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 328 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 388 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 448 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 508 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 474
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 920 bits (464), Expect = 0.0 Identities = 470/472 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 45 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 104 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 164 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 224 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 284 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 344 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 345 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 404 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 464 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 465 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 918 bits (463), Expect = 0.0 Identities = 538/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139540 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 139481 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 139480 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 139422 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139421 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 139362 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139361 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 139302 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||| | |||||||||||||| | |||| Sbjct: 139301 atacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtc 139242 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 139241 cagtagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaat 139182 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139181 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 139122 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 139121 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 139062 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 139061 aaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttg 139005 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 139004 aagaatgagccggcgactcat 138984 Score = 918 bits (463), Expect = 0.0 Identities = 538/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110405 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 110464 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 110465 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 110523 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110524 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 110583 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110584 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 110643 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||| | |||||||||||||| | |||| Sbjct: 110644 atacaagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtc 110703 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 110704 cagtagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaat 110763 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110764 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 110823 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 110824 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 110883 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 110884 aaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttg 110940 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 110941 aagaatgagccggcgactcat 110961
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 918 bits (463), Expect = 0.0 Identities = 538/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127818 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 127759 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 127758 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 127700 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127699 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 127640 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127639 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 127580 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 127579 atacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 127520 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 127519 cagtagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaat 127460 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127459 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 127400 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 127399 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 127340 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 127339 aaccg---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttg 127283 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 127282 aagaatgagccggcgactcat 127262 Score = 918 bits (463), Expect = 0.0 Identities = 538/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107104 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 107163 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 107164 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 107222 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107223 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 107282 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107283 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 107342 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 107343 atacaagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 107402 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 107403 cagtagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaat 107462 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107463 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 107522 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 107523 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 107582 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107583 aaccg---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttg 107639 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 107640 aagaatgagccggcgactcat 107660
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 918 bits (463), Expect = 0.0 Identities = 538/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134177 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 134118 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 134117 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 134059 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134058 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 133999 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133998 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 133939 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| | |||| Sbjct: 133938 atacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtc 133879 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133878 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 133819 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133818 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 133759 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 133758 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 133699 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 133698 aaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttg 133642 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 133641 aagaatgagccggcgactcat 133621 Score = 918 bits (463), Expect = 0.0 Identities = 538/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103794 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103853 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 103854 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 103912 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103913 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 103972 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103973 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 104032 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| | |||| Sbjct: 104033 atacaagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtc 104092 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104093 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 104152 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104153 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104212 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 104213 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 104272 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 104273 aaccg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttg 104329 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 104330 aagaatgagccggcgactcat 104350
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 902 bits (455), Expect = 0.0 Identities = 536/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142062 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 142003 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 142002 gagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 141944 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141943 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 141884 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141883 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 141824 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||||||||| | |||||||||||||| | |||| Sbjct: 141823 atacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtc 141764 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 141763 cagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaat 141704 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141703 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcg 141644 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 141643 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 141584 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 141583 aaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttg 141527 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 141526 aagaatgagccggcgactcat 141506 Score = 902 bits (455), Expect = 0.0 Identities = 536/561 (95%), Gaps = 4/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111595 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 111654 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 111655 gagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 111713 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111714 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 111773 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111774 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 111833 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||||||||| | |||||||||||||| | |||| Sbjct: 111834 atacaagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtc 111893 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 111894 cagtaaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaat 111953 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111954 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcg 112013 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 112014 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 112073 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 112074 aaccg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttg 112130 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 112131 aagaatgagccggcgactcat 112151
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 892 bits (450), Expect = 0.0 Identities = 535/561 (95%), Gaps = 8/561 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134935 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 134876 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 134875 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 134817 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134816 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 134757 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134756 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 134697 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || |||||| |||||||||||||||| |||| Sbjct: 134696 atacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtc 134637 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 134636 cagtagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaat 134577 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134576 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 134517 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 134516 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 134457 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 134456 aaccg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttg 134404 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 134403 aagaatgagccggcgactcat 134383 Score = 892 bits (450), Expect = 0.0 Identities = 535/561 (95%), Gaps = 8/561 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105347 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 105406 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105407 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 105465 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105466 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 105525 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105526 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 105585 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || |||||| |||||||||||||||| |||| Sbjct: 105586 atacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtc 105645 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 105646 cagtagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaat 105705 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105706 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 105765 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 105766 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 105825 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 105826 aaccg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttg 105878 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 105879 aagaatgagccggcgactcat 105899
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 888 bits (448), Expect = 0.0 Identities = 535/561 (95%), Gaps = 6/561 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136545 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 136486 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 136485 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 136427 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136426 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 136367 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136366 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 136307 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 136306 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 136247 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 136246 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 136187 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136186 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 136127 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 136126 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 136067 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 136066 aaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttg 136012 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 136011 aagaatgagccggcgactcat 135991 Score = 888 bits (448), Expect = 0.0 Identities = 535/561 (95%), Gaps = 6/561 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105880 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 105939 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 105940 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 105998 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105999 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106058 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106059 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106118 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 106119 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 106178 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106179 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 106238 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106239 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 106298 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106299 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106358 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || | |||||||||||||||||||| Sbjct: 106359 aaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttg 106413 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 106414 aagaatgagccggcgactcat 106434
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 870 bits (439), Expect = 0.0 Identities = 533/561 (95%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132729 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 132670 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 132669 gagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 132611 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132610 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 132551 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132550 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 132491 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||||| Sbjct: 132490 atacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtc 132431 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132430 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 132371 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132370 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 132311 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 132310 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 132251 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 132250 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 132195 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 132194 aagaatgagccggcgactcat 132174 Score = 870 bits (439), Expect = 0.0 Identities = 533/561 (95%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104149 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 104208 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 104209 gagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 104267 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104268 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 104327 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104328 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 104387 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||||| Sbjct: 104388 atacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtc 104447 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104448 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 104507 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104508 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104567 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 104568 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 104627 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 104628 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 104683 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 104684 aagaatgagccggcgactcat 104704
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 870 bits (439), Expect = 0.0 Identities = 533/561 (95%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 132952 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 132893 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 132892 gagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 132834 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132833 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 132774 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132773 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 132714 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 132713 ataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 132654 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132653 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 132594 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132593 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 132534 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 132533 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 132474 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 132473 aaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttg 132418 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 132417 aagaatgagccggcgactcat 132397 Score = 870 bits (439), Expect = 0.0 Identities = 533/561 (95%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103812 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 103871 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 103872 gagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 103930 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103931 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 103990 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103991 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 104050 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 104051 ataaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 104110 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104111 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 104170 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104171 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104230 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 104231 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 104290 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 104291 aaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttg 104346 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 104347 aagaatgagccggcgactcat 104367
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 870 bits (439), Expect = 0.0 Identities = 533/561 (95%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132722 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 132663 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 132662 gagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 132604 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132603 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 132544 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132543 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 132484 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||||| Sbjct: 132483 atacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtc 132424 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132423 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 132364 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132363 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 132304 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 132303 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 132244 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 132243 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 132188 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 132187 aagaatgagccggcgactcat 132167 Score = 870 bits (439), Expect = 0.0 Identities = 533/561 (95%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104147 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 104206 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 104207 gagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 104265 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104266 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 104325 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104326 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 104385 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||||| Sbjct: 104386 atacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtc 104445 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104446 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 104505 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104506 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 104565 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 104566 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 104625 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 104626 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 104681 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 104682 aagaatgagccggcgactcat 104702
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 862 bits (435), Expect = 0.0 Identities = 532/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131621 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 131562 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 131561 gagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 131503 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131502 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 131443 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131442 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 131383 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||||| Sbjct: 131382 atacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtc 131323 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131322 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 131263 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131262 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 131203 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 131202 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 131143 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 131142 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 131087 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 131086 aagaatgagccggcgactcat 131066 Score = 862 bits (435), Expect = 0.0 Identities = 532/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103014 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103073 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 103074 gagattcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 103132 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103133 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 103192 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103193 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 103252 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || ||| |||||||||||||| |||||| Sbjct: 103253 atacaagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtc 103312 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103313 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 103372 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103373 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 103432 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 103433 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 103492 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 103493 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 103548 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 103549 aagaatgagccggcgactcat 103569
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 862 bits (435), Expect = 0.0 Identities = 532/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 133913 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 133854 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 133853 gagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 133795 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133794 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 133735 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133734 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 133675 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | |||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 133674 aaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 133615 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133614 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 133555 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133554 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 133495 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 133494 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 133435 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 133434 aaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttg 133379 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 133378 aagaatgagccggcgactcat 133358 Score = 862 bits (435), Expect = 0.0 Identities = 532/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 104736 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 104795 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 104796 gagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 104854 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104855 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 104914 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104915 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 104974 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | |||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 104975 aaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 105034 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105035 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 105094 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105095 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 105154 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 105155 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 105214 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 105215 aaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttg 105270 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 105271 aagaatgagccggcgactcat 105291
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 854 bits (431), Expect = 0.0 Identities = 531/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140314 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 140255 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 140254 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 140196 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140195 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 140136 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140135 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 140076 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||| || ||| |||||||||||||| | |||| Sbjct: 140075 atacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtc 140016 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 140015 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 139956 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139955 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 139896 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 139895 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 139836 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | || ||||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 139835 aaccg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttg 139780 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 139779 aagaatgagccggcgactcat 139759 Score = 854 bits (431), Expect = 0.0 Identities = 531/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109746 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 109805 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 109806 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 109864 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109865 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 109924 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109925 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 109984 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||| || ||| |||||||||||||| | |||| Sbjct: 109985 atacaagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtc 110044 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110045 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 110104 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110105 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 110164 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 110165 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 110224 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | || ||||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 110225 aaccg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttg 110280 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 110281 aagaatgagccggcgactcat 110301
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 854 bits (431), Expect = 0.0 Identities = 531/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 45 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 104 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105 gagattcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagaga 163 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 283 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | |||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 284 aaaaaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 343 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 344 cagtagccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 403 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 463 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 464 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 523 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | || |||||||||||||||||||| Sbjct: 524 aaccg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttg 579 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 580 aagaatgagccggcgactcat 600
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 854 bits (431), Expect = 0.0 Identities = 531/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 54 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || |||||| |||||||||||||| | |||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 473 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 533 aaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttg 588 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 589 aagaatgagccggcgactcat 609
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136254 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 136195 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 136194 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 136136 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136135 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 136076 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136075 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 136016 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 136015 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 135956 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135955 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 135896 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135895 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135836 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135835 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135776 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135775 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 135721 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 135720 gaagaatgagccggcgactcat 135699 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106376 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 106435 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 106436 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 106494 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106495 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106554 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106555 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106614 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 106615 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 106674 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106675 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 106734 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106735 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 106794 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 106795 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106854 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106855 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106909 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106910 gaagaatgagccggcgactcat 106931
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136892 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 136833 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 136832 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 136774 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136773 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 136714 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136713 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 136654 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 136653 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 136594 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136593 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 136534 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136533 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 136474 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 136473 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 136414 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 136413 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 136359 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 136358 gaagaatgagccggcgactcat 136337 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106665 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 106724 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 106725 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 106783 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106784 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106843 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106844 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106903 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 106904 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 106963 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106964 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 107023 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107024 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 107083 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 107084 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 107143 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 107144 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 107198 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 107199 gaagaatgagccggcgactcat 107220
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1570 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 1629 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 1630 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 1688 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1689 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 1748 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1749 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 1808 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 1809 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 1868 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1869 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 1928 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1929 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 1988 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 1989 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 2048 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 2049 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 2103 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 2104 gaagaatgagccggcgactcat 2125
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135500 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 135441 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 135440 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 135382 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135381 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135322 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135321 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135262 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 135261 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 135202 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135201 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 135142 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135141 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135082 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135081 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135022 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135021 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 134967 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 134966 gaagaatgagccggcgactcat 134945 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105536 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 105595 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105596 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 105654 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105655 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 105714 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105715 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 105774 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 105775 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 105834 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105835 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 105894 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105895 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 105954 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 105955 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106014 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106015 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106069 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106070 gaagaatgagccggcgactcat 106091
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135635 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 135576 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 135575 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 135517 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135516 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135457 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135456 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135397 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 135396 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 135337 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135336 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 135277 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135276 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135217 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135216 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135157 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135156 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 135102 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 135101 gaagaatgagccggcgactcat 135080 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105708 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 105767 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105768 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 105826 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105827 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 105886 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105887 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 105946 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 105947 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 106006 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106007 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 106066 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106067 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 106126 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 106127 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106186 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106187 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106241 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106242 gaagaatgagccggcgactcat 106263
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135633 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 135574 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 135573 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 135515 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135514 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135455 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135454 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135395 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 135394 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 135335 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135334 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 135275 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135274 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135215 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135214 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135155 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135154 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 135100 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 135099 gaagaatgagccggcgactcat 135078 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105705 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 105764 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105765 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 105823 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105824 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 105883 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105884 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 105943 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 105944 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 106003 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 106004 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 106063 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106064 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 106123 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 106124 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106183 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106184 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106238 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106239 gaagaatgagccggcgactcat 106260
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135545 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 135486 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 135485 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 135427 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135426 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135367 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135366 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135307 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 135306 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 135247 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135246 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 135187 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135186 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135127 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135126 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135067 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135066 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 135012 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 135011 gaagaatgagccggcgactcat 134990 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105583 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 105642 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105643 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 105701 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105702 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 105761 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105762 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 105821 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 105822 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 105881 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105882 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 105941 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105942 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 106001 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 106002 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106061 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106062 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106116 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106117 gaagaatgagccggcgactcat 106138
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 136252 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 136193 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 136192 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 136134 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136133 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 136074 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136073 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 136014 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 136013 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 135954 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135953 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 135894 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135893 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135834 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135833 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135774 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135773 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 135719 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 135718 gaagaatgagccggcgactcat 135697 Score = 842 bits (425), Expect = 0.0 Identities = 531/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106374 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 106433 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 106434 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 106492 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106493 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106552 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106553 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106612 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 106613 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 106672 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106673 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 106732 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106733 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 106792 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 106793 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106852 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106853 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106907 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106908 gaagaatgagccggcgactcat 106929
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 841 bits (424), Expect = 0.0 Identities = 526/558 (94%), Gaps = 4/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 47 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccg 106 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||| ||| |||||||| |||||| |||||||| ||| |||||||||||| Sbjct: 107 gagattcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagaga 165 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 166 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 225 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 226 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 285 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| ||| |||||| ||||||||||||||||||||| |||||||| |||||| | |||| Sbjct: 286 atataagtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtc 345 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 346 cagtagccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaat 405 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 465 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 466 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 525 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 526 aaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttg 582 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 583 aagaatgagccggcgact 600
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 839 bits (423), Expect = 0.0 Identities = 529/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106051 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccg 106110 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 106111 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 106169 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106170 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106229 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106230 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106289 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || ||||| |||||||||||||| | |||| Sbjct: 106290 atacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtc 106349 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106350 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 106409 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106410 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 106469 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106470 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106529 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 106530 aaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttg 106585 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 106586 aagaatgagccggcgactcat 106606 Score = 789 bits (398), Expect = 0.0 Identities = 528/564 (93%), Gaps = 8/564 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 135858 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccg 135799 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 135798 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 135740 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135680 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc- 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135679 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135620 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 ||||||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||| Sbjct: 135619 aatacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagt 135560 Query: 300 ccagtagccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtgga 358 ||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||| Sbjct: 135559 ccagtagccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtgga 135500 Query: 359 atcccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135499 atcccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgata 135440 Query: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 135439 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 135380 Query: 478 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 537 |||||||| | |||| ||||||||||||||| | | | | ||||||||||||||||| Sbjct: 135379 tgaaaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctg 135324 Query: 538 ttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||| Sbjct: 135323 ttgaagaatgagccggcgactcat 135300
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 839 bits (423), Expect = 0.0 Identities = 529/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 136134 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccg 136075 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 136074 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 136016 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136015 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135956 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135955 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135896 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || ||||| |||||||||||||| | |||| Sbjct: 135895 atacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtc 135836 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 135835 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 135776 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135775 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 135716 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135715 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135656 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 135655 aaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttg 135600 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 135599 aagaatgagccggcgactcat 135579 Score = 839 bits (423), Expect = 0.0 Identities = 529/561 (94%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 106273 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgcaaataagcgtagatccg 106332 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 106333 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 106391 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106392 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106451 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106452 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106511 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || ||||| |||||||||||||| | |||| Sbjct: 106512 atacaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtc 106571 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 106572 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 106631 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 106632 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 106691 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 106692 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 106751 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 106752 aaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttg 106807 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 106808 aagaatgagccggcgactcat 106828
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 837 bits (422), Expect = 0.0 Identities = 528/559 (94%), Gaps = 7/559 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135512 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 135453 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 135452 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 135394 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135393 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135334 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135333 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135274 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 135273 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 135214 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 135213 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 135154 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135153 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135094 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135093 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135034 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135033 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 134979 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 134978 gaagaatgagccggcgact 134960 Score = 837 bits (422), Expect = 0.0 Identities = 528/559 (94%), Gaps = 7/559 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105550 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 105609 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 105610 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 105668 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105669 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 105728 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105729 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 105788 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||||||||||| ||||| Sbjct: 105789 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagt 105848 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105849 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 105908 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105909 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 105968 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 105969 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106028 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106029 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106083 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 106084 gaagaatgagccggcgact 106102
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 835 bits (421), Expect = 0.0 Identities = 530/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 135983 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 135924 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 | ||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 135923 gggattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 135865 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135864 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 135805 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135804 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 135745 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 135744 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 135685 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135684 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 135625 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135624 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 135565 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 135564 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 135505 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 135504 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 135450 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 135449 gaagaatgagccggcgactcat 135428 Score = 835 bits (421), Expect = 0.0 Identities = 530/562 (94%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 106155 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 106214 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 | ||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 106215 gggattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 106273 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106274 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 106333 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106334 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 106393 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||||| Sbjct: 106394 atacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagt 106453 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106454 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 106513 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106514 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 106573 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 106574 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 106633 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 106634 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 106688 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 106689 gaagaatgagccggcgactcat 106710
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 833 bits (420), Expect = 0.0 Identities = 530/562 (94%), Gaps = 6/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 105 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 106 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 164 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 caacctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 224 Query: 181 tagtagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tagtagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 284 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||| Sbjct: 285 aatacaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagt 344 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 345 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 404 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagt 464 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 465 gaagtagtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatg 524 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 525 aaaccg---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctgtt 580 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 581 gaagaatgagccggcgactcat 602
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 43 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 102 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 103 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 163 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 223 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 283 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 342 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 343 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 403 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 463 tagtga 468 |||||| Sbjct: 421 tagtga 426
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 823 bits (415), Expect = 0.0 Identities = 527/561 (93%), Gaps = 5/561 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 131745 cgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccg 131686 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 131685 gagattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagaga 131627 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131626 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 131567 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131566 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 131507 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||||| Sbjct: 131506 atacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtc 131447 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131446 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 131387 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131386 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 131327 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 131326 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 131267 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | ||||| |||||||||||||||| | || | |||||||||||||||||| Sbjct: 131266 aaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttg 131211 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 131210 aagaatgagccggcgactcat 131190 Score = 823 bits (415), Expect = 0.0 Identities = 527/561 (93%), Gaps = 5/561 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 101700 cgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcagagatccg 101759 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 101760 gagattcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagaga 101818 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101819 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 101878 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101879 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 101938 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||||| Sbjct: 101939 atacaagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtc 101998 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101999 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 102058 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102059 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 102118 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 102119 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 102178 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | ||||| |||||||||||||||| | || | |||||||||||||||||| Sbjct: 102179 aaccg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttg 102234 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 102235 aagaatgagccggcgactcat 102255
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 819 bits (413), Expect = 0.0 Identities = 528/562 (93%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139458 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 139399 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 139398 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagaga 139340 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 139339 caacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 139280 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139279 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 139220 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | |||| Sbjct: 139219 ataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtc 139160 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 139159 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 139100 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139099 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 139040 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| Sbjct: 139039 aagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatga 138980 Query: 481 aaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 138979 aaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgtt 138925 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 138924 gaagaatgagccggcgactcat 138903 Score = 819 bits (413), Expect = 0.0 Identities = 528/562 (93%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 109639 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 109698 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 109699 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagaga 109757 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 109758 caacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 109817 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109818 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 109877 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | |||| Sbjct: 109878 ataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtc 109937 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 109938 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 109997 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109998 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 110057 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| Sbjct: 110058 aagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatga 110117 Query: 481 aaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 110118 aaccg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgtt 110172 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 110173 gaagaatgagccggcgactcat 110194
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 819 bits (413), Expect = 0.0 Identities = 529/562 (94%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 80 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 81 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 139 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 199 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 200 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 259 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| ||||| Sbjct: 260 atacaagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagt 318 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 319 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 378 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 438 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 439 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 498 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 499 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 553 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 554 gaagaatgagccggcgactcat 575
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 817 bits (412), Expect = 0.0 Identities = 487/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130489 cgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 130430 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 130429 gagattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagaga 130371 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130370 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 130311 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130310 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagct 130251 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 130250 atacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 130191 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130190 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 130131 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 130130 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 130071 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 130070 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 130011 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 130010 aaccg---taagctcccaagcagtgggagg 129984 Score = 817 bits (412), Expect = 0.0 Identities = 487/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101967 cgaggaggggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 102026 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 102027 gagattcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagaga 102085 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102086 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 102145 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102146 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagct 102205 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct: 102206 atacaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtc 102265 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102266 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 102325 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 102326 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 102385 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 102386 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 102445 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 102446 aaccg---taagctcccaagcagtgggagg 102472 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Minus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 129929 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 102527
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 815 bits (411), Expect = 0.0 Identities = 529/564 (93%), Gaps = 7/564 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139667 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 139608 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 139607 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 139549 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139548 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 139489 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139488 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 139429 Query: 241 atacaagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| || || ||| ||||||||||||| | ||| Sbjct: 139428 atacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagt 139369 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 139368 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 139309 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 139308 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagc 139249 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 139248 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 139189 Query: 480 aaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctg 537 |||||| | |||||||||||||||||||| || | | ||||||||||||||||| Sbjct: 139188 aaaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctg 139132 Query: 538 ttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||| Sbjct: 139131 ttgaagaatgagccggcgactcat 139108 Score = 815 bits (411), Expect = 0.0 Identities = 529/564 (93%), Gaps = 7/564 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 109632 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 109691 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 109692 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 109750 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109751 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 109810 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109811 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 109870 Query: 241 atacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| || || ||| ||||||||||||| | ||| Sbjct: 109871 atacaagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagt 109930 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 109931 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 109990 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 109991 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagc 110050 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 110051 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 110110 Query: 480 aaaccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctg 537 |||||| | |||||||||||||||||||| || | | ||||||||||||||||| Sbjct: 110111 aaaccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctg 110167 Query: 538 ttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||| Sbjct: 110168 ttgaagaatgagccggcgactcat 110191
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 809 bits (408), Expect = 0.0 Identities = 486/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 54 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| ||| Sbjct: 473 aagtactaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 533 aaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 809 bits (408), Expect = 0.0 Identities = 486/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 54 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||| ||||||||||||| ||||||||||||||||| || ||||||||||||| ||| Sbjct: 473 aagtactaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 533 aaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||| ||||||||||||||||||| | |||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcat 621
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 801 bits (404), Expect = 0.0 Identities = 482/506 (95%), Gaps = 4/506 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46302 gaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 46361 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||||||||||||||| |||||| ||||||||||||| |||||||||||||||| Sbjct: 46362 ttcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaac 46420 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 46421 ctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtagt 46480 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 244 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 46481 agcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaatac 46540 Query: 245 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 304 |||||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 46541 aagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccagt 46600 Query: 305 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 364 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46601 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 46660 Query: 365 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46661 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 46720 Query: 425 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 484 ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 46721 agtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaacc 46780 Query: 485 gtgctgagctcccaagcagtgggagg 510 | | ||||| |||||||||||||| Sbjct: 46781 g---taagctctcaagcagtgggagg 46803 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 46858
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 801 bits (404), Expect = 0.0 Identities = 485/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 54 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||| ||||||||||||| ||||||||||||||||| || ||||||||||||| ||| Sbjct: 473 aagtaataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 533 aaccg---taagctcccaagcagtgggagg 559 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatga 548 |||||| ||||||||||||||| ||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga 608
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 801 bits (404), Expect = 0.0 Identities = 485/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 54 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| ||| Sbjct: 473 aagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 533 aaccg---taagctcccaagcagtgggagg 559 Score = 42.1 bits (21), Expect = 1.9 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||| |||||||||||| || |||||||| ||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagcc-gcgactcat 620
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 801 bits (404), Expect = 0.0 Identities = 485/510 (95%), Gaps = 4/510 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 54 cgaggaagggcgtagtaagcgacgaaatgcttcggggggttgaaaataagcgtagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 473 aagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggagg 510 ||||| | |||||||||||||||||||| Sbjct: 533 aaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 39/41 (95%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||| ||||||||||||||| |||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcat 620
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 795 bits (401), Expect = 0.0 Identities = 525/562 (93%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142833 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccg 142774 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 142773 gagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 142715 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142714 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 142655 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142654 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtc 142595 Query: 241 atacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | ||| Sbjct: 142594 atacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagt 142535 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 142534 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 142475 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142474 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 142415 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 142414 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 142355 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | ||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 142354 aaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 142300 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 142299 gaagaatgagccggcgactcat 142278 Score = 795 bits (401), Expect = 0.0 Identities = 525/562 (93%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 110495 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgcagatccg 110554 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||| ||||||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 110555 gagattcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 110613 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110614 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 110673 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110674 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtc 110733 Query: 241 atacaagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagt 299 |||||||||| ||||||||||||||||| | || ||||| ||||||||||||| | ||| Sbjct: 110734 atacaagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagt 110793 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110794 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 110853 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 110854 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 110913 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 110914 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 110973 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | ||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 110974 aaaccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 111028 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 111029 gaagaatgagccggcgactcat 111050
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 793 bits (400), Expect = 0.0 Identities = 523/561 (93%), Gaps = 6/561 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4277 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 4336 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||| Sbjct: 4337 aggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagaga 4395 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4396 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 4455 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4456 tagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagca 4515 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||| ||||||||||||| | || || ||||||||||||| |||||| Sbjct: 4516 atacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtc 4575 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4576 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 4635 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4636 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 4695 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 4696 aagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatga 4755 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 4756 aaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttg 4810 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 4811 aagaatgagccggcgactcat 4831
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 793 bits (400), Expect = 0.0 Identities = 523/561 (93%), Gaps = 6/561 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23648 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 23589 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||| Sbjct: 23588 aggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagaga 23530 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23529 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 23470 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 23469 tagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagca 23410 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||| ||||||||||||| | || || ||||||||||||| |||||| Sbjct: 23409 atacaagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtc 23350 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23349 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 23290 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 23289 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 23230 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 23229 aagtagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatga 23170 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| | | | |||||||||||||||||||| Sbjct: 23169 aaccg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttg 23115 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 23114 aagaatgagccggcgactcat 23094
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 793 bits (400), Expect = 0.0 Identities = 524/561 (93%), Gaps = 7/561 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4546 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 4605 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||| Sbjct: 4606 aggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagaga 4664 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4665 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 4724 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4725 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 4784 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || || ||||||||||||| |||||| Sbjct: 4785 atacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtc 4844 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 4845 cagtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaat 4904 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4905 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 4964 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 4965 aagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatga 5024 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | ||||||||| |||||||||| | | | |||||||||||||||||||| Sbjct: 5025 aaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttg 5078 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 5079 aagaatgagccggcgactcat 5099
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 793 bits (400), Expect = 0.0 Identities = 524/561 (93%), Gaps = 7/561 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4546 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 4605 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||| Sbjct: 4606 aggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagaga 4664 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4665 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 4724 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4725 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 4784 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||| || || || ||||||||||||| |||||| Sbjct: 4785 atacaagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtc 4844 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| Sbjct: 4845 cagtagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaat 4904 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4905 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 4964 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||| ||| Sbjct: 4965 aagtagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatga 5024 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | ||||||||| |||||||||| | | | |||||||||||||||||||| Sbjct: 5025 aaccg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttg 5078 Query: 541 aagaatgagccggcgactcat 561 ||||||||||||||||||||| Sbjct: 5079 aagaatgagccggcgactcat 5099
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 791 bits (399), Expect = 0.0 Identities = 522/560 (93%), Gaps = 6/560 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 86308 cgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaatgagcatagatccg 86367 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||| ||| |||||| ||||||||||||| |||||||||||| Sbjct: 86368 gagattcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagaga 86426 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86427 caacctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccg 86486 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc- 239 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86487 tagtagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcc 86546 Query: 240 -aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 298 |||| |||| |||||||||||||||||||||||||| | ||||||||||||| | || Sbjct: 86547 caatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagag 86606 Query: 299 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 358 |||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 86607 tccagtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtgga 86666 Query: 359 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86667 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 86726 Query: 419 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 478 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 86727 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 86786 Query: 479 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 538 ||||||| | |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 86787 gaaaccg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgt 86843 Query: 539 tgaagaatgagccggcgact 558 |||||||||||||||||||| Sbjct: 86844 tgaagaatgagccggcgact 86863
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 791 bits (399), Expect = 0.0 Identities = 522/560 (93%), Gaps = 6/560 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 88394 cgaggaagggcgtggtaagcgacgaaatgcttcggggagttgaaaattagcatagatccg 88453 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 88454 gagattcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagaga 88512 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 88513 caacctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccg 88572 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88573 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 88632 Query: 241 --atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaag 298 ||| |||| |||||||||||||||||||||||||| | ||||||||||||| | || Sbjct: 88633 caatataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagag 88692 Query: 299 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 358 |||||||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||| Sbjct: 88693 tccagtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtgga 88752 Query: 359 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88753 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 88812 Query: 419 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 478 ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | Sbjct: 88813 cgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacat 88872 Query: 479 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 538 ||||||| | |||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 88873 gaaaccg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgt 88929 Query: 539 tgaagaatgagccggcgact 558 |||||||||||||||||||| Sbjct: 88930 tgaagaatgagccggcgact 88949
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 787 bits (397), Expect = 0.0 Identities = 514/549 (93%), Gaps = 7/549 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 154 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 155 gagattcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagaga 213 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 214 caacctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccg 273 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 333 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||| |||||||||||||||||||| ||||||| |||||||||||| | |||| Sbjct: 334 ataaaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtc 393 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 394 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 453 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 513 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| |||||||||||||||| ||| ||||||||||||| ||| Sbjct: 514 aagtagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatga 573 Query: 481 aaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgtt 539 ||||| | ||||||||||||| |||||| | || | ||||||||||||||||||| Sbjct: 574 aaccg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgtt 628 Query: 540 gaagaatga 548 ||||||||| Sbjct: 629 gaagaatga 637
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 787 bits (397), Expect = 0.0 Identities = 400/401 (99%) Strand = Plus / Plus Query: 161 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 221 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 281 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 340 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 341 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 401 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 461 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 401
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 783 bits (395), Expect = 0.0 Identities = 528/564 (93%), Gaps = 10/564 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| Sbjct: 1813 cgaggaagggcgtagtaatc-acgaaatgcttcggggagttgaaaataagcatagatccg 1871 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 1872 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 1930 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag-cgattccc 179 ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1931 caacctggcgaactgaaccatcttagtagccagaggaaaagaaagcaaaaggcgattccc 1990 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1991 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 2050 Query: 240 aatacaagc-gttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaa 297 ||||||||| | ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 2051 aatacaagcggccgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 2110 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2111 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 2170 Query: 358 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2171 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 2230 Query: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 2231 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 2290 Query: 478 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 537 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 2291 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 2345 Query: 538 ttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||| Sbjct: 2346 ttgaagaatgagccggcgactcat 2369
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 163 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 223 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 283 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 342 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 343 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 403 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 463 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 399
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 783 bits (395), Expect = 0.0 Identities = 398/399 (99%) Strand = Plus / Plus Query: 163 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 223 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 283 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 342 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 343 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 403 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 463 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 399
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 781 bits (394), Expect = 0.0 Identities = 523/562 (93%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 542 cgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccg 601 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 602 gagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagaga 660 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 661 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 720 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 780 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||||| Sbjct: 781 atacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtc 840 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 841 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 900 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 901 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcc 960 Query: 421 aagtagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 || ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 961 aaatagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 1020 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | ||||| |||||||||||||| || || ||||||||||||||||||| Sbjct: 1021 aaaccg---taagctctcaagcagtgggaggagacag---gctctgaccgcgtgcctgtt 1074 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 1075 gaagaatgagccggcgactcat 1096
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 781 bits (394), Expect = 0.0 Identities = 397/398 (99%) Strand = Plus / Plus Query: 164 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 224 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 284 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 343 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 344 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 404 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 464 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcat 398
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 781 bits (394), Expect = 0.0 Identities = 397/398 (99%) Strand = Plus / Plus Query: 164 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 224 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 284 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 343 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 344 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 404 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 464 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcat 401
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 777 bits (392), Expect = 0.0 Identities = 395/396 (99%) Strand = Plus / Plus Query: 166 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 226 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 286 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 345 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 346 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 406 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 466 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 526 accgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcat 396
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 771 bits (389), Expect = 0.0 Identities = 520/561 (92%), Gaps = 7/561 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 54 cgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||| ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| ||| Sbjct: 473 aagtaataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatga 532 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | ||||| |||||||||||||| || || |||||| ||||||||||||| Sbjct: 533 aaccg---taagctctcaagcagtgggaggagacag---gctctgaacgcgtgcctgttg 586 Query: 541 aagaatgagccggcgactcat 561 || |||||||||||||||||| Sbjct: 587 aaaaatgagccggcgactcat 607
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 769 bits (388), Expect = 0.0 Identities = 526/565 (93%), Gaps = 9/565 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 131825 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 131766 Query: 61 gagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 | ||||||| | |||||||||||||| |||||| ||||||||||| | ||||||||||| Sbjct: 131765 gggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagag 131707 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131706 acaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 131647 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131646 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 131587 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaa 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | | Sbjct: 131586 tatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgaga 131527 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 131526 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 131467 Query: 358 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131466 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 131407 Query: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 131406 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 131347 Query: 478 tgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcct 536 |||||||| | |||||||||||||||||||| || | || |||||||||||||||| Sbjct: 131346 tgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcct 131291 Query: 537 gttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||| Sbjct: 131290 gttgaagaatgagccggcgactcat 131266 Score = 769 bits (388), Expect = 0.0 Identities = 526/565 (93%), Gaps = 9/565 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 103569 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 103628 Query: 61 gagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 | ||||||| | |||||||||||||| |||||| ||||||||||| | ||||||||||| Sbjct: 103629 gggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagag 103687 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103688 acaacctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 103747 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103748 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 103807 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaa 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | | Sbjct: 103808 tatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgaga 103867 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 103868 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 103927 Query: 358 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103928 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 103987 Query: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 | |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 103988 gtgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 104047 Query: 478 tgaaaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcct 536 |||||||| | |||||||||||||||||||| || | || |||||||||||||||| Sbjct: 104048 tgaaaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcct 104103 Query: 537 gttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||| Sbjct: 104104 gttgaagaatgagccggcgactcat 104128
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 769 bits (388), Expect = 0.0 Identities = 525/563 (93%), Gaps = 12/563 (2%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 cgaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 205 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 206 gagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagaga 264 Query: 121 caacctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattccc 179 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 265 caacctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattccc 324 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 325 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagc 383 Query: 240 aatacaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaaag 298 ||||||||||| |||||||||||||||| || || ||| |||||||||||||| |||| Sbjct: 384 aatacaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaag 443 Query: 299 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 444 tccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgga 503 Query: 359 atcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 418 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 504 atcccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatag 563 Query: 419 cgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgt 478 ||||||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||| | Sbjct: 564 cgaagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaacat 622 Query: 479 gaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgt 538 ||||||| | |||||||||||||||||||| | | |||||||||||||||||| Sbjct: 623 gaaaccg---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcctgt 675 Query: 539 tgaagaatgagccggcgactcat 561 ||||||||||||||||||||||| Sbjct: 676 tgaagaatgagccggcgactcat 698
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 757 bits (382), Expect = 0.0 Identities = 522/567 (92%), Gaps = 10/567 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct: 128400 cgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccg 128341 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||||| Sbjct: 128340 gagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagaga 128282 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 128281 caacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccg 128222 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc- 239 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128221 tagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcg 128162 Query: 240 -----aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 128161 atacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggca 128102 Query: 295 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 354 | |||||||||||||||||||||||||||| | ||||| |||| |||||||||||||||| Sbjct: 128101 agagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacg 128042 Query: 355 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128041 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 127982 Query: 415 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 474 ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 127981 atagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaataga 127922 Query: 475 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 534 || |||||||| | |||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 127921 acatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgc 127865 Query: 535 ctgttgaagaatgagccggcgactcat 561 ||||||| ||||||||||||||||||| Sbjct: 127864 ctgttgaggaatgagccggcgactcat 127838 Score = 757 bits (382), Expect = 0.0 Identities = 522/567 (92%), Gaps = 10/567 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||| Sbjct: 95047 cgaggaagggcgtagcaatcgacgaaatgcttcggggagctgaaaacaagcatagatccg 95106 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||||| Sbjct: 95107 gagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagaga 95165 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 95166 caacctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccg 95225 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc- 239 ||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95226 tagtagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcg 95285 Query: 240 -----aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 95286 atacaaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggca 95345 Query: 295 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 354 | |||||||||||||||||||||||||||| | ||||| |||| |||||||||||||||| Sbjct: 95346 agagtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacg 95405 Query: 355 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95406 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 95465 Query: 415 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 474 ||||||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 95466 atagcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaataga 95525 Query: 475 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 534 || |||||||| | |||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 95526 acatgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgc 95582 Query: 535 ctgttgaagaatgagccggcgactcat 561 ||||||| ||||||||||||||||||| Sbjct: 95583 ctgttgaggaatgagccggcgactcat 95609
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 755 bits (381), Expect = 0.0 Identities = 520/562 (92%), Gaps = 7/562 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52640 cgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 52581 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 52580 gagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagaga 52522 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52521 taacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 52462 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 52461 tagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagca 52402 Query: 241 atacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagt 299 ||| ||| || ||||||||||||||| | | |||| ||| |||||||||||||| ||||| Sbjct: 52401 ataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagt 52342 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 52341 ccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaa 52282 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 52281 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagt 52222 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || Sbjct: 52221 taagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatg 52162 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 52161 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 52107 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 52106 gaagaatgagccggcgactcat 52085 Score = 755 bits (381), Expect = 0.0 Identities = 520/562 (92%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 37188 cgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 37247 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 37248 gagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagaga 37306 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37307 taacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 37366 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 37367 tagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagca 37426 Query: 241 atacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagt 299 ||| ||| || ||||||||||||||| | | |||| ||| |||||||||||||| ||||| Sbjct: 37427 ataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagt 37486 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 37487 ccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaa 37546 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 37547 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagt 37606 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || Sbjct: 37607 taagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatg 37666 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 37667 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 37721 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 37722 gaagaatgagccggcgactcat 37743
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 755 bits (381), Expect = 0.0 Identities = 520/562 (92%), Gaps = 7/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4116 cgaggaaggatgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 4175 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| ||||||||| |||||| ||||||||||||| |||| ||||||| Sbjct: 4176 gagattcccgaatagggcaaccttttgaactgc-tgctgaatccatgggcagacaagaga 4234 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4235 taacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 4294 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 4295 tagtagcggcgagcgaaatgggagcagcctaaaccgcgaaaacggggttgtgggagagca 4354 Query: 241 atacaagcgttgtgctgctaggcgaa-gcggttgagtgccgcaccctagatggctaaagt 299 ||| ||| || ||||||||||||||| | | |||| ||| |||||||||||||| ||||| Sbjct: 4355 ataaaagtgtcgtgctgctaggcgaacgagcttgaatgctgcaccctagatggcgaaagt 4414 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||| Sbjct: 4415 ccagtagccgaaagcatcattagcttgtgctctgacccgagtagcatgggacacgtggaa 4474 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 4475 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccgatagt 4534 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||| || Sbjct: 4535 taagtagtaccgtgagggaagggtgaaaagaacccccattggggagtgaaatagaacatg 4594 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | || | ||||||||||||||||||| Sbjct: 4595 aaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 4649 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 4650 gaagaatgagccggcgactcat 4671
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 753 bits (380), Expect = 0.0 Identities = 516/558 (92%), Gaps = 5/558 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 116163 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccg 116104 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| ||||||| Sbjct: 116103 gagattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagaga 116045 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 116044 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcg 115985 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| Sbjct: 115984 tagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagct 115926 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| |||||| Sbjct: 115925 aaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtc 115866 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 115865 cagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaat 115806 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115805 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcg 115746 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 115745 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 115686 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 115685 aaccg---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttg 115629 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 115628 aagaatgagccggcgact 115611 Score = 753 bits (380), Expect = 0.0 Identities = 516/558 (92%), Gaps = 5/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 85957 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccg 86016 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||| ||||||| |||||||| ||| |||| ||||||| Sbjct: 86017 gagattcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagaga 86075 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86076 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcg 86135 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| Sbjct: 86136 tagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagct 86194 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | ||| |||||| ||||||||||||| ||||||| | ||||||||||||| |||||| Sbjct: 86195 aaataagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtc 86254 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||| ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 86255 cagtaaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaat 86314 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86315 cccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcg 86374 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 86375 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 86434 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 86435 aaccg---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttg 86491 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 86492 aagaatgagccggcgact 86509
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 747 bits (377), Expect = 0.0 Identities = 516/559 (92%), Gaps = 5/559 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2090 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccg 2149 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||||| Sbjct: 2150 gagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagaga 2208 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2209 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 2268 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2269 tagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagca 2328 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | |||| Sbjct: 2329 aaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtc 2388 Query: 301 cagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||| || | || ||||||| |||||||||||||||||||||||||| Sbjct: 2389 cagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaa 2448 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2449 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagt 2508 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 2509 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 2568 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 2569 aaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgtt 2625 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 2626 gaagaatgagccggcgact 2644
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 747 bits (377), Expect = 0.0 Identities = 516/559 (92%), Gaps = 5/559 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 118103 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccg 118044 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||||| Sbjct: 118043 gagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagaga 117985 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117984 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 117925 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117924 tagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagca 117865 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | |||| Sbjct: 117864 aaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtc 117805 Query: 301 cagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||| || | || ||||||| |||||||||||||||||||||||||| Sbjct: 117804 cagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaa 117745 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 117744 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagt 117685 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 117684 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 117625 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 117624 aaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgtt 117568 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 117567 gaagaatgagccggcgact 117549 Score = 747 bits (377), Expect = 0.0 Identities = 516/559 (92%), Gaps = 5/559 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 89999 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatagatccg 90058 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| ||| |||||||||||| Sbjct: 90059 gagattcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagaga 90117 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90118 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccca 90177 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 90178 tagtagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagca 90237 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | |||| Sbjct: 90238 aaataagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtc 90297 Query: 301 cagtagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||| || | || ||||||| |||||||||||||||||||||||||| Sbjct: 90298 cagtagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaa 90357 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 90358 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagt 90417 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 90418 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 90477 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 90478 aaaccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgtt 90534 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 90535 gaagaatgagccggcgact 90553
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 745 bits (376), Expect = 0.0 Identities = 511/554 (92%), Gaps = 4/554 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 51 gaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagcatggatccggaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||||||| |||||||| |||||| |||||||| ||| |||| ||||||||||| Sbjct: 111 ttcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaac 169 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 170 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatagt 229 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 244 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 230 agcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaagt 289 Query: 245 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 304 | |||||||| |||||||||||| ||||| | | ||||| ||||||| | |||||||| Sbjct: 290 aggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccagt 349 Query: 305 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 364 |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 350 agccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatcccg 409 Query: 365 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 424 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 410 tgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaagt 469 Query: 425 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 484 ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 470 agtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaacc 529 Query: 485 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 544 | | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 530 g---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaaga 586 Query: 545 atgagccggcgact 558 |||||||||||||| Sbjct: 587 atgagccggcgact 600
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 737 bits (372), Expect = 0.0 Identities = 513/558 (91%), Gaps = 4/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 3936 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccg 3995 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||||| Sbjct: 3996 gagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagaga 4054 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 4055 caacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 4114 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4115 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 4174 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | |||| Sbjct: 4175 atataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtc 4234 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||| Sbjct: 4235 cagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaat 4294 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4295 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 4354 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 4355 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 4414 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 || || | |||| |||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 4415 aatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttg 4471 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 4472 aagaatgagccggcgact 4489
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 737 bits (372), Expect = 0.0 Identities = 513/558 (91%), Gaps = 4/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 30 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatagatccg 89 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||||||||||| |||||||||||| || ||||||||| Sbjct: 90 gagattcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagaga 148 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || Sbjct: 149 caacctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcg 208 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 209 tagtagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagct 268 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 | | |||| |||| ||||||||||||| ||||||| | ||||||||||||| | |||| Sbjct: 269 aaagaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtc 328 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||| |||||||||| || ||||| ||||| ||||||||| ||||||||||||||||| Sbjct: 329 cagtaaccgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaat 388 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 448 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 449 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 508 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 ||||| | |||| ||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 509 aaccg---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttg 565 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 566 aagaatgagccggcgact 583
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 737 bits (372), Expect = 0.0 Identities = 513/558 (91%), Gaps = 4/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 46 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccg 105 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||||| Sbjct: 106 gagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagaga 164 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 165 caacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 224 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 225 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 284 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | |||| Sbjct: 285 atataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtc 344 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||| Sbjct: 345 cagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaat 404 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 464 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 465 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 524 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 || || | |||| |||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 525 aatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttg 581 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 582 aagaatgagccggcgact 599
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 737 bits (372), Expect = 0.0 Identities = 513/558 (91%), Gaps = 4/558 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 151199 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccg 151140 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||||| Sbjct: 151139 gagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagaga 151081 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 151080 caacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 151021 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 151020 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 150961 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | |||| Sbjct: 150960 atataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtc 150901 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||| Sbjct: 150900 cagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaat 150841 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150840 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 150781 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 150780 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 150721 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 || || | |||| |||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 150720 aatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttg 150664 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 150663 aagaatgagccggcgact 150646 Score = 737 bits (372), Expect = 0.0 Identities = 513/558 (91%), Gaps = 4/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 117467 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccg 117526 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||||| Sbjct: 117527 gagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagaga 117585 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 117586 caacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 117645 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 117646 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 117705 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | |||| Sbjct: 117706 atataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtc 117765 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||| Sbjct: 117766 cagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaat 117825 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117826 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 117885 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 117886 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 117945 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 || || | |||| |||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 117946 aatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttg 118002 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 118003 aagaatgagccggcgact 118020
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 737 bits (372), Expect = 0.0 Identities = 513/558 (91%), Gaps = 4/558 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 46 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaagaagcatagatccg 105 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||||| |||||||| || || | |||||||| Sbjct: 106 gagattcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagaga 164 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 165 caacttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 224 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 225 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 284 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| |||||||||||||||||| ||||| ||||||| | |||||| |||||| | |||| Sbjct: 285 atataagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtc 344 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 ||||||||||||||| |||| |||| || | ||||||||||||||||||||||||||| Sbjct: 345 cagtagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaat 404 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 405 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 464 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 465 aagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatga 524 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 540 || || | |||| |||||||||| |||| ||| ||||||||||||||||||||||| Sbjct: 525 aatcg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttg 581 Query: 541 aagaatgagccggcgact 558 |||||||||||||||||| Sbjct: 582 aagaatgagccggcgact 599
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 735 bits (371), Expect = 0.0 Identities = 516/562 (91%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||| Sbjct: 47 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaataagtatggatccg 106 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| ||||||||||||||| |||||||| ||| || ||||||||| Sbjct: 107 gagattcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagaga 165 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 166 caacccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcg 225 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| Sbjct: 226 tagtagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagct 285 Query: 241 atacaa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaa 296 |||||| || ||| ||||||||||||||| ||||||| | |||||| |||||| | Sbjct: 286 atacaaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgag 345 Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 ||||||||| |||||||||| || | |||||||||| ||||||||||||||||||||||| Sbjct: 346 agtccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtg 405 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 406 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 465 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 466 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaac 525 Query: 477 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 536 |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 526 atgaaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcct 582 Query: 537 gttgaagaatgagccggcgact 558 |||||||||||||||||||||| Sbjct: 583 gttgaagaatgagccggcgact 604
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 735 bits (371), Expect = 0.0 Identities = 474/504 (94%), Gaps = 7/504 (1%) Strand = Plus / Minus Query: 59 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 118 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 119 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 179 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 239 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 297 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 358 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 478 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 537 |||||||| | |||||||||||||||||||| | || | ||||||||||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctg 39 Query: 538 ttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||| Sbjct: 38 ttgaagaatgagccggcgactcat 15
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 733 bits (370), Expect = 0.0 Identities = 482/516 (93%), Gaps = 5/516 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||| || |||||||||||||||||||||||||||||||| ||||||| Sbjct: 54 cgaggaagggcgtattaatcgacgaaatgcttcggggagttgaaaataagccgagatccg 113 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| |||||| |||||||| |||| | ||||||||||||| |||||||||||| Sbjct: 114 gagattcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagaga 172 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 173 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 232 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 233 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 292 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||| | || |||||| | ||||||||||| |||||| Sbjct: 293 atacaagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtc 352 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 353 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 412 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 472 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 480 ||||||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| ||| Sbjct: 473 aagtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatga 531 Query: 481 aaccgtgctgagctcccaagcagtgggaggggaaag 516 ||||| | ||||| |||||||||||||| ||||| Sbjct: 532 aaccg---taagctctcaagcagtgggaggagaaag 564
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 724 bits (365), Expect = 0.0 Identities = 436/456 (95%), Gaps = 4/456 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 43 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 102 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||||||||||||| |||||||||||| Sbjct: 103 gagattcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagaga 161 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 162 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 221 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 222 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 281 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| |||||||||||||||||||| || | | |||||||||||||| | |||| Sbjct: 282 atacaagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtc 341 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 342 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 401 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 402 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtg 459 Query: 421 aagtagtaccgtgagggaaaggtgaaaagaaccccc 456 ||||||||||||||||||| |||| ||||||||||| Sbjct: 460 aagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 724 bits (365), Expect = 0.0 Identities = 513/559 (91%), Gaps = 5/559 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 146513 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccg 146454 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| ||||| Sbjct: 146453 gagattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagaga 146395 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 146394 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 146335 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 146334 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 146275 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | |||| Sbjct: 146274 atataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtc 146215 Query: 301 cagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||| Sbjct: 146214 cagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaa 146155 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 146154 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 146095 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 146094 aaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatg 146035 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | ||||||||||||||||||| ||| |||| ||||||||||||||||| Sbjct: 146034 aaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgtt 145978 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 145977 gaagaatgagccggcgact 145959 Score = 724 bits (365), Expect = 0.0 Identities = 513/559 (91%), Gaps = 5/559 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||| Sbjct: 111949 cgaggaagggcgtagcaagcgacgaaatgcttcggggagctgaaaatgagcatggatccg 112008 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||| |||||||| |||| | |||||||| ||| |||||| ||||| Sbjct: 112009 gagattcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagaga 112067 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 112068 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccg 112127 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 112128 tagtagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagca 112187 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 ||| ||||||| |||||||||||||||| ||||||| | | ||||||||||| | |||| Sbjct: 112188 atataagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtc 112247 Query: 301 cagtagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaa 359 |||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||| Sbjct: 112248 cagtagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaa 112307 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 112308 tcccgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagc 112367 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 112368 aaagtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatg 112427 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | ||||||||||||||||||| ||| |||| ||||||||||||||||| Sbjct: 112428 aaaccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgtt 112484 Query: 540 gaagaatgagccggcgact 558 ||||||||||||||||||| Sbjct: 112485 gaagaatgagccggcgact 112503
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 722 bits (364), Expect = 0.0 Identities = 445/469 (94%), Gaps = 6/469 (1%) Strand = Plus / Plus Query: 94 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 153 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 154 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 214 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 272 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 273 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 332 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 333 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 393 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 452 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 453 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 512 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 || | ||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 480
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 718 bits (362), Expect = 0.0 Identities = 426/446 (95%), Gaps = 1/446 (0%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 23 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 82 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||||||||| ||||||| ||| ||||||||| |||||||||||| Sbjct: 83 gagattcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagaga 141 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 142 caacctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccg 201 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 202 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 261 Query: 241 atacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtc 300 |||||||||| ||||||||||||||||||| || ||||||||||||||| |||| Sbjct: 262 atacaagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtc 321 Query: 301 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 360 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 322 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 381 Query: 361 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 441 Query: 421 aagtagtaccgtgagggaaaggtgaa 446 ||||||||||||||||||| |||||| Sbjct: 442 aagtagtaccgtgagggaagggtgaa 467
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 716 bits (361), Expect = 0.0 Identities = 521/562 (92%), Gaps = 18/562 (3%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 687 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 628 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||| ||||||||| ||| |||| |||||||||||||| |||||||||||| Sbjct: 627 gagattcccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggcaagaga 575 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcgattccc 179 || || |||| ||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 574 ca--ct-gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcgattccc 521 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 461 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 299 |||||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||| Sbjct: 460 gatacaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagt 401 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 400 ccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaa 341 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 281 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 |||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| || Sbjct: 280 gaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatg 221 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||||||||||||||||||| | | | ||||||||||||||||||| Sbjct: 220 aaaccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgtt 165 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 164 gaagaatgagccggcgactcat 143
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 52 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 111 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 112 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 172 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 232 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 292 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 351 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 352 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 412 ccgata 417 |||||| Sbjct: 361 ccgata 366
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 2 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 61 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 123423 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 123364 Query: 62 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 121 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 123363 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 123304 Query: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123303 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 123244 Query: 182 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123243 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 123184 Query: 242 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123183 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 123124 Query: 302 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 361 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123123 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 406 bits (205), Expect = e-110 Identities = 208/209 (99%) Strand = Plus / Minus Query: 353 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||| ||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcat 122612
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 356/360 (98%) Strand = Plus / Minus Query: 2 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 61 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 12825964 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaattaagcatagatccgg 12825905 Query: 62 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 121 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825904 agattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagac 12825845 Query: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825844 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 12825785 Query: 182 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825784 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 12825725 Query: 242 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825724 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 12825665 Query: 302 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 361 ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825664 agtagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 406 bits (205), Expect = e-110 Identities = 208/209 (99%) Strand = Plus / Minus Query: 353 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||| ||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcat 12825153 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 666 bits (336), Expect = 0.0 Identities = 375/389 (96%), Gaps = 13/389 (3%) Strand = Plus / Minus Query: 178 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 238 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 358 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcat 75098 Score = 353 bits (178), Expect = 4e-94 Identities = 181/182 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75666 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 75607 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 75606 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 75547 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75546 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 75487 Query: 181 ta 182 || Sbjct: 75486 ta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 109 gcaggcaagagacaacctggcgaactgaaacatcttagta 148 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 666 bits (336), Expect = 0.0 Identities = 375/389 (96%), Gaps = 13/389 (3%) Strand = Plus / Plus Query: 178 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 238 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 358 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcat 382440 Score = 353 bits (178), Expect = 4e-94 Identities = 181/182 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381872 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 381931 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 381932 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 381991 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381992 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 382051 Query: 181 ta 182 || Sbjct: 382052 ta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 109 gcaggcaagagacaacctggcgaactgaaacatcttagta 148 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 109 gcaggcaagagacaacctggcgaactgaaacatcttagta 148 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 666 bits (336), Expect = 0.0 Identities = 375/389 (96%), Gaps = 13/389 (3%) Strand = Plus / Minus Query: 178 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 238 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 358 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcat 113189 Score = 353 bits (178), Expect = 4e-94 Identities = 181/182 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113757 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 113698 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 113697 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 113638 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113637 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 113578 Query: 181 ta 182 || Sbjct: 113577 ta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 109 gcaggcaagagacaacctggcgaactgaaacatcttagta 148 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 666 bits (336), Expect = 0.0 Identities = 375/389 (96%), Gaps = 13/389 (3%) Strand = Plus / Minus Query: 178 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 238 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 358 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcat 367871 Score = 666 bits (336), Expect = 0.0 Identities = 375/389 (96%), Gaps = 13/389 (3%) Strand = Plus / Minus Query: 178 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 238 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 297 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 358 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 533 gcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcat 184476 Score = 353 bits (178), Expect = 4e-94 Identities = 181/182 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368439 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 368380 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 368379 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 368320 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368319 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 368260 Query: 181 ta 182 || Sbjct: 368259 ta 368258 Score = 353 bits (178), Expect = 4e-94 Identities = 181/182 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 185044 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 184985 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 184984 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 184925 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184924 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 184865 Query: 181 ta 182 || Sbjct: 184864 ta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 109 gcaggcaagagacaacctggcgaactgaaacatcttagta 148 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 644 bits (325), Expect = 0.0 Identities = 507/562 (90%), Gaps = 8/562 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 cgaggaagggtgtagtaatcgacgaaatgcttcggggagttgaaaataagcatagatccg 105 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||| ||| || ||||||| | ||||| |||| |||||||| ||||| |||||| Sbjct: 106 tagattcccgaatggggtaacctttcacactgc-tgctcaatccatgggcaggaaagaga 164 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 165 caacctggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattccca 224 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 ||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 225 tagtagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagagca 284 Query: 241 atacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagt 299 ||| |||||| ||||||||||||||||| | || | || |||||||||||||| ||||| Sbjct: 285 ataaaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaagt 344 Query: 300 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 359 ||||||| | |||||||||||| || |||||||||||||||||||||| |||||| || Sbjct: 345 ccagtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtgtaa 404 Query: 360 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 419 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 405 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaatagt 464 Query: 420 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 479 ||||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||| || Sbjct: 465 aaagtagtaccgtgagggaagggtgaaaagaa-ccccattggggagtgaaatagaacatg 523 Query: 480 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 539 |||||| | |||| ||||||||||||||| | || | ||||||||||||||||||| Sbjct: 524 aaaccg---taagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgtt 578 Query: 540 gaagaatgagccggcgactcat 561 |||||||||||||||||||||| Sbjct: 579 gaagaatgagccggcgactcat 600
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 79 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 138 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 139 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 199 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 258 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 259 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 318 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 319 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 378 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 379 gaccaccttgcaaggctaaatactcctgggtg 410 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 527 bits (266), Expect = e-146 Identities = 269/270 (99%) Strand = Plus / Plus Query: 292 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 351 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 352 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 412 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 472 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 532 tgcctgttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcat 270
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 517 bits (261), Expect = e-143 Identities = 354/380 (93%), Gaps = 5/380 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 2645 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 2704 Query: 61 gagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 | ||||||| | |||||||||||||| |||||| ||||||||||| | ||||||||||| Sbjct: 2705 gggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagag 2763 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2764 acaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 2823 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2824 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 2883 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaa 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | | Sbjct: 2884 tatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgaga 2943 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 2944 gtccagtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtgg 3002 Query: 358 aatcccgtgtgaatcagcaa 377 |||||||||||||||||||| Sbjct: 3003 aatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 517 bits (261), Expect = e-143 Identities = 354/380 (93%), Gaps = 5/380 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 900 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcgtagatccg 959 Query: 61 gagattcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 | ||||||| | |||||||||||||| |||||| ||||||||||| | ||||||||||| Sbjct: 960 gggattcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagag 1018 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 179 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1019 acaacttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccc 1078 Query: 180 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1079 gtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 1138 Query: 240 aatacaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaa 297 ||||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | | Sbjct: 1139 tatacaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgaga 1198 Query: 298 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 357 ||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||| Sbjct: 1199 gtccagtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtgg 1257 Query: 358 aatcccgtgtgaatcagcaa 377 |||||||||||||||||||| Sbjct: 1258 aatcccgtgtgaatcagcaa 1277
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 507 bits (256), Expect = e-140 Identities = 480/554 (86%), Gaps = 3/554 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 143969 gaagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggaga 144028 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||||||| |||||| |||||||||||||||| || ||||| ||||||||||| Sbjct: 144029 ttcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaac 144088 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 | ||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 144089 ccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagt 144148 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 244 | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144149 aacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatga 144208 Query: 245 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 304 || | || | ||||||||||| ||||||||| |||||| |||||| | |||||||| Sbjct: 144209 gggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagt 144268 Query: 305 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 364 ||||| ||| | |||||| | |||| |||| |||||||||||||||| ||||||| Sbjct: 144269 agccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccg 144328 Query: 365 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 424 ||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 144329 tgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagc 144388 Query: 425 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 484 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 144389 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 144448 Query: 485 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 544 | ||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||| Sbjct: 144449 g---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaaga 144505 Query: 545 atgagccggcgact 558 |||||||||||||| Sbjct: 144506 atgagccggcgact 144519 Score = 507 bits (256), Expect = e-140 Identities = 480/554 (86%), Gaps = 3/554 (0%) Strand = Plus / Minus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||| |||| |||||||||||||||||||| ||||||| | ||||||||||||| Sbjct: 88882 gaagggcgtggcaaacgacgaaatgcttcggggagccgaaaataggtatagatccggaga 88823 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||||||| |||||| |||||||||||||||| || ||||| ||||||||||| Sbjct: 88822 ttcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaac 88763 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 | ||||||||||||||||||||||||| ||||| | |||||||||||||||||| |||| Sbjct: 88762 ccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctagt 88703 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatac 244 | ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88702 aacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatga 88643 Query: 245 aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagt 304 || | || | ||||||||||| ||||||||| |||||| |||||| | |||||||| Sbjct: 88642 gggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccagt 88583 Query: 305 agccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccg 364 ||||| ||| | |||||| | |||| |||| |||||||||||||||| ||||||| Sbjct: 88582 agccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatcccg 88523 Query: 365 tgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagt 424 ||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 88522 tgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaagc 88463 Query: 425 agtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaacc 484 |||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||| Sbjct: 88462 agtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaacc 88403 Query: 485 gtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaaga 544 | ||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||| Sbjct: 88402 g---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaaga 88346 Query: 545 atgagccggcgact 558 |||||||||||||| Sbjct: 88345 atgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 488 bits (246), Expect = e-134 Identities = 249/250 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 163 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 283 Query: 241 atacaagcgt 250 |||||||||| Sbjct: 284 atacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 488 bits (246), Expect = e-134 Identities = 249/250 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 103 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 163 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 223 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca 283 Query: 241 atacaagcgt 250 |||||||||| Sbjct: 284 atacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 460 bits (232), Expect = e-126 Identities = 312/336 (92%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 2 gaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccgg 61 |||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 177078 gaggaagggcgtagtaatcgacgaaatgcttcggggagttgaaaatcagcatagatccgg 177137 Query: 62 agattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagac 121 |||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| Sbjct: 177138 agattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagag 177196 Query: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 181 |||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177197 aaccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 177256 Query: 182 agtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaa 241 |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 177257 agtagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaa 177316 Query: 242 tacaagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtc 300 ||||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||| Sbjct: 177317 tacaagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtc 177376 Query: 301 cagtagccgaaagcatcactagcttatgctctgacc 336 |||||||||||||||||||||||||| ||||||||| Sbjct: 177377 cagtagccgaaagcatcactagcttaggctctgacc 177412 Score = 81.8 bits (41), Expect = 2e-12 Identities = 41/41 (100%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 177445 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagc 150 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagc 150 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 432 bits (218), Expect = e-118 Identities = 482/566 (85%), Gaps = 18/566 (3%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| Sbjct: 139223 cgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatccg 139166 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----caa 116 ||||| ||| ||| ||| |||| || ||||||| ||||||||| | || ||| Sbjct: 139165 gagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggcaa 139110 Query: 117 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 176 ||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||||||||| Sbjct: 139109 gagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgatt 139050 Query: 177 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggag 236 |||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 139049 cccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggag 138990 Query: 237 agcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 292 ||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| || Sbjct: 138989 agcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacgg 138931 Query: 293 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 352 || ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||| Sbjct: 138930 ttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggca 138871 Query: 353 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||||| Sbjct: 138870 cgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgac 138811 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 138810 cgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 138751 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 |||| |||||||| | ||||||| |||||||||||| ||| ||||||||||||||| Sbjct: 138750 gaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgt 138694 Query: 533 gcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||| Sbjct: 138693 gcctgttgaagaatgagccggcgact 138668 Score = 432 bits (218), Expect = e-118 Identities = 482/566 (85%), Gaps = 18/566 (3%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||||| ||||| ||||||||||| || | ||||||||||||||| Sbjct: 82654 cgaggaagggcgtagcaggcgac--aatgcttcgggaagccagagataagcatagatccg 82711 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg----caa 116 ||||| ||| ||| ||| |||| || ||||||| ||||||||| | || ||| Sbjct: 82712 gagatccccgaatgggttaaccccttgaactgcc----gaatccatgggatgggcggcaa 82767 Query: 117 gagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatt 176 ||||| ||| ||||||| |||||||| | ||||| | |||| |||| |||||||||||| Sbjct: 82768 gagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaagcgatt 82827 Query: 177 cccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggag 236 |||| |||||||||||||||| ||||| ||||||||||||| |||||||||||||||| Sbjct: 82828 cccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgtgggag 82887 Query: 237 agcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatgg 292 ||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || ||| || Sbjct: 82888 agcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatcccagacgg 82946 Query: 293 ctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggca 352 || ||||| ||||||| ||||| ||| ||||| ||||||||||||||||||||||||| Sbjct: 82947 ttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatggggca 83006 Query: 353 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 412 |||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||||||| Sbjct: 83007 cgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgggtgac 83066 Query: 413 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 472 |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 83067 cgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaata 83126 Query: 473 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 532 |||| |||||||| | ||||||| |||||||||||| ||| ||||||||||||||| Sbjct: 83127 gaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgaccgcgt 83183 Query: 533 gcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||| Sbjct: 83184 gcctgttgaagaatgagccggcgact 83209
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 428 bits (216), Expect = e-117 Identities = 219/220 (99%) Strand = Plus / Plus Query: 342 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 402 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 462 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 521 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcat 220
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 74 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 133 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 194 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 253 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 254 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 313 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 314 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 373 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 374 gcaaggaccaccttgcaag 392 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 1e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 401 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 460 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 461 ggtagtgaaatagaacgtgaaacc 484 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||| ||| |||||||||||||||| | |||||| |||||||| |||||| | Sbjct: 3756 cgaggaagggcatagttagcgacgaaatgcttcagagagttgcaaataagcgtagatcag 3697 Query: 61 gag 63 ||| Sbjct: 3696 gag 3694 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcat 3209
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 408 bits (206), Expect = e-111 Identities = 307/340 (90%), Gaps = 3/340 (0%) Strand = Plus / Minus Query: 219 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 278 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 279 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 338 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 339 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 399 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 458 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 459 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 518 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgact 5948 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 18 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 77 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 78 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 137 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 138 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 197 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 198 atgggagcagcctaaaccgt 217 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 171 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 230 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 231 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 289 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 290 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 349 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 350 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 409 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 410 gaccgata 417 |||||||| Sbjct: 241 gaccgata 248
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 404 bits (204), Expect = e-109 Identities = 204/204 (100%) Strand = Plus / Plus Query: 358 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 418 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 478 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 537 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 538 ttgaagaatgagccggcgactcat 561 |||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcat 204
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 391 bits (197), Expect = e-105 Identities = 251/267 (94%), Gaps = 4/267 (1%) Strand = Plus / Plus Query: 295 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 354 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 355 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 415 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 474 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 475 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 534 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 535 ctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcat 265
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 375 bits (189), Expect = e-100 Identities = 223/233 (95%), Gaps = 1/233 (0%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79724 cgaggaagggcgtagtaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 79665 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||| ||||||||||||||| |||||| |||||||| || |||||||||||||| Sbjct: 79664 aggattcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagaga 79606 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79605 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 79546 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 233 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79545 tagtagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 365 bits (184), Expect = 1e-97 Identities = 187/188 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75812 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 75871 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 75872 gagattcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagaga 75931 Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75932 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 75991 Query: 181 tagtagcg 188 |||||||| Sbjct: 75992 tagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 455 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 127 ggcgaactgaaacatcttag 146 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 280 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 339 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 340 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 399 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 400 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 459 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 460 gggtagtgaaatagaacgtgaaaccgt 486 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 337 bits (170), Expect = 2e-89 Identities = 455/540 (84%), Gaps = 15/540 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 203 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 262 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 263 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 322 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 323 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 381 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 382 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 441 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 442 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagc 501 |||||||||||||||| |||| |||||| |||||| ||||| | | ||| |||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaaac---atatgctaccaagc 536 Query: 502 agtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||| || || | |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 537 agtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcgactcat 594
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 599 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||| Sbjct: 38 gaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggaga 97 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 | ||| |||||| ||||| || |||||||||||||| || | |||||||||||||| Sbjct: 98 tgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaac 157 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 158 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 217 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgt 217 || |||||||||||||||| ||||||||||||| Sbjct: 218 agtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 291 bits (147), Expect = 1e-75 Identities = 206/225 (91%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | |||||||||||||||||||||||||||||||||||||||| Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 264 bits (133), Expect = 3e-67 Identities = 193/213 (90%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||||||||||||||||||||||||||| ||| || |||||| |||||||||| Sbjct: 51 gaagggcgtagcaagcgacgaaatgcttcggggagctgagaacaagcattgatccggaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 | ||| |||||| ||||| || |||||||||||||| || | |||||||||||||| Sbjct: 111 tgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaac 170 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 171 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 230 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgt 217 || |||||||||||||||| ||||||||||||| Sbjct: 231 agtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 289 bits (146), Expect = 5e-75 Identities = 205/224 (91%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgact 716 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||||||||||||||||||||||||| || ||| || |||||| |||||||||| Sbjct: 155 gaagggcgtagcaagcgacgaaatgcttcgggaagctgagaacaagcattgatccggaga 214 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 | ||| |||||| ||||| || |||||||||||||| || | |||||||||||||| Sbjct: 215 tgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaac 274 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 275 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 334 Query: 185 agcggcgagcgaaatgggagcagcctaaaccg 216 || |||||||||||||||| |||||||||||| Sbjct: 335 agtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 288 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 346 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 347 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 406 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 407 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 466 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 467 gaaatagaacgtgaaaccgtgctgagctcc 496 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 288 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 346 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 347 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 406 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 407 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 466 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 467 gaaatagaacgtgaaaccgtgctgagctcc 496 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 288 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 346 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 347 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 406 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 407 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 466 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 467 gaaatagaacgtgaaaccgtgctgagctcc 496 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 489 tgagctcccaagcagtgggaggggaaagtgatc 521 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 288 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 346 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 347 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 406 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 407 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 466 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 467 gaaatagaacgtgaaaccgtgctgagctcc 496 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 489 tgagctcccaagcagtgggaggggaaagtgatc 521 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 283 bits (143), Expect = 3e-73 Identities = 226/252 (89%), Gaps = 5/252 (1%) Strand = Plus / Plus Query: 310 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 369 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 370 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 429 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 430 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 489 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 490 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 549 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 550 ccggcgactcat 561 |||||||||||| Sbjct: 608 ccggcgactcat 619 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 109 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 168 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 169 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 228 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 229 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 288 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 289 a 289 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 276 bits (139), Expect = 7e-71 Identities = 204/225 (90%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | |||||||||||||||||||||||||||||||||||||||| Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 Score = 184 bits (93), Expect = 2e-43 Identities = 185/212 (87%), Gaps = 4/212 (1%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggag 63 |||||||||| |||||||||||||||| |||| |||| || |||| || ||||||||| Sbjct: 7 gaagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggag 64 Query: 64 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 123 || ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| || Sbjct: 65 atccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataa 123 Query: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcag 183 Query: 184 tagcggcgagcgaaatgggagcagcctaaacc 215 ||| |||||||||||||||| ||||||||||| Sbjct: 184 tagtggcgagcgaaatgggaacagcctaaacc 215
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434060 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 19434001 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19434000 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 19433941 Query: 121 caacctggcgaactgaaacat 141 ||||||||||||||||||||| Sbjct: 19433940 caacctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 509 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 550 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 427 taccgtgagggaaaggtgaaaagaacc 453 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51587 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 51528 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 51527 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 51468 Query: 121 caacctggcgaactgaaacat 141 ||||||||||||||||||||| Sbjct: 51467 caacctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119551 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 119492 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 119491 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 119432 Query: 121 caacctggcgaactgaaacat 141 ||||||||||||||||||||| Sbjct: 119431 caacctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 272 bits (137), Expect = 1e-69 Identities = 140/141 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6071 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 6130 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 6131 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 6190 Query: 121 caacctggcgaactgaaacat 141 ||||||||||||||||||||| Sbjct: 6191 caacctggcgaactgaaacat 6211
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 268 bits (135), Expect = 2e-68 Identities = 138/139 (99%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1591 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 1650 Query: 61 gagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagaga 120 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1651 gagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagaga 1710 Query: 121 caacctggcgaactgaaac 139 ||||||||||||||||||| Sbjct: 1711 caacctggcgaactgaaac 1729
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 256 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 315 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 316 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 375 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 376 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 435 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 436 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 495 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 496 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 555 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 556 act 558 ||| Sbjct: 599 act 601 Score = 252 bits (127), Expect = 1e-63 Identities = 208/235 (88%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 51 gaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| ||| Sbjct: 111 cccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataac 170 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 171 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 230 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 231 agcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Minus Query: 256 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 315 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 316 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 375 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 376 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 435 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 436 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 495 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 496 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 555 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 556 act 558 ||| Sbjct: 124666 act 124664 Score = 264 bits (133), Expect = 3e-67 Identities = 261/303 (86%), Gaps = 3/303 (0%) Strand = Plus / Plus Query: 256 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 315 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 316 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 375 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 376 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 435 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 436 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 495 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 496 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 555 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 556 act 558 ||| Sbjct: 95200 act 95202 Score = 252 bits (127), Expect = 1e-63 Identities = 208/235 (88%) Strand = Plus / Minus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 125214 gaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaaga 125155 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| ||| Sbjct: 125154 cccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataac 125095 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 125094 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 125035 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125034 agcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 252 bits (127), Expect = 1e-63 Identities = 208/235 (88%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||| | ||||||||||||||||||||||| || || ||||||||||||| ||| Sbjct: 94652 gaagggcgtggtaagcgacgaaatgcttcggggagctgcgaacaagcatagatccgaaga 94711 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| ||| Sbjct: 94712 cccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataac 94771 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 94772 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgagt 94831 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 239 |||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94832 agcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 598 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||| || |||||||| ||| |||| || ||| || |||||| |||||||||| Sbjct: 38 gaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggaga 97 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 | ||| |||||| |||||| || |||| | ||||||| || || | ||||||||| Sbjct: 98 tccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaac 157 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 158 ctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagt 217 Query: 185 agcggcgagcgaaatgggagcagcctaaacc 215 |||||||||||||| |||| ||| ||||||| Sbjct: 218 agcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Minus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 115064 Score = 258 bits (130), Expect = 2e-65 Identities = 201/224 (89%), Gaps = 3/224 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgact 86924 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Minus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||| || |||||||| ||| |||| || ||| || |||||| |||||||||| Sbjct: 115625 gaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggaga 115566 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 | ||| |||||| |||||| || |||| | ||||||| || || | ||||||||| Sbjct: 115565 tccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaac 115506 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 115505 ctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagt 115446 Query: 185 agcggcgagcgaaatgggagcagcctaaacc 215 |||||||||||||| |||| ||| ||||||| Sbjct: 115445 agcggcgagcgaaaggggaacagtctaaacc 115415 Score = 165 bits (83), Expect = 2e-37 Identities = 179/211 (84%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||| || |||||||| ||| |||| || ||| || |||||| |||||||||| Sbjct: 86363 gaagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggaga 86422 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 | ||| |||||| |||||| || |||| | ||||||| || || | ||||||||| Sbjct: 86423 tccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaac 86482 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 86483 ctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagt 86542 Query: 185 agcggcgagcgaaatgggagcagcctaaacc 215 |||||||||||||| |||| ||| ||||||| Sbjct: 86543 agcggcgagcgaaaggggaacagtctaaacc 86573
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 248 bits (125), Expect = 2e-62 Identities = 131/133 (98%) Strand = Plus / Minus Query: 429 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 488 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 489 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 548 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 549 gccggcgactcat 561 ||||||||||||| Sbjct: 107930 gccggcgactcat 107918
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 627 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 214 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 244 bits (123), Expect = 3e-61 Identities = 201/224 (89%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgact 588 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 175 ttcccgtagtagcggcgagcgaa 197 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 263 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 322 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 323 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 382 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 383 accttgcaaggctaaatactcctgggtgaccga 415 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 234 bits (118), Expect = 3e-58 Identities = 159/170 (93%), Gaps = 2/170 (1%) Strand = Plus / Minus Query: 1 cgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatcc 59 |||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 89836 cgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatcc 89777 Query: 60 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 ||||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 89776 ggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagag 89718 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 169 |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89717 acaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 234 bits (118), Expect = 3e-58 Identities = 159/170 (93%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaa-tgcttcggggagttgaaaataagcatagatcc 59 |||||||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 434 cgaggaagagcgtagtaagcgacgaaaatgcttcggggagttgaaaataagcgtagatcc 493 Query: 60 ggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagag 119 ||||||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||| Sbjct: 494 ggagattccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagag 552 Query: 120 acaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 169 |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 553 acaacctggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 3e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 409 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 282 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 341 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 342 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 401 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 402 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 461 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 462 gtagtgaaatagaacgtgaaa 482 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 8e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 84 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 143 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 144 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 203 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 204 gcagcctaaaccgtgaaaacggggttg 230 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcat 606
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 116 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 176 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| ||| Sbjct: 38 gaagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtaga 97 Query: 65 ttcccaaataggtcaacct 83 ||||| |||||| |||||| Sbjct: 98 ttcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 6/224 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | |||||||||||||||||||||||||||||||||||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgact 2384 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 116 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 176 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| || |||||||| ||||||||||| || ||| |||| | |||||| ||| Sbjct: 1804 gaagggcgtagtaaccgacgaaacgcttcggggagctggaaacaagctttgatccgtaga 1863 Query: 65 ttcccaaataggtcaacct 83 ||||| |||||| |||||| Sbjct: 1864 ttcccgaatagggcaacct 1882
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 230 bits (116), Expect = 4e-57 Identities = 205/234 (87%), Gaps = 3/234 (1%) Strand = Plus / Plus Query: 328 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 387 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 388 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 447 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 448 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 507 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 508 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 || ||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcat 610 Score = 186 bits (94), Expect = 5e-44 Identities = 183/210 (87%), Gaps = 2/210 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| ||||||||||| |||||||||||| ||||| | | |||||||||||| Sbjct: 51 gaagggcgtagtaagcgacgaaacgcttcggggagtcgaaaacagacgtagatccggaga 110 Query: 65 ttcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagacaa 123 ||||| ||| || |||| ||| |||||| ||||||| ||| ||| | ||||||||| Sbjct: 111 ttcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagacaa 169 Query: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 183 ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || || Sbjct: 170 cctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctgag 229 Query: 184 tagcggcgagcgaaatgggagcagcctaaa 213 ||||||||||||||||||||| |||||||| Sbjct: 230 tagcggcgagcgaaatgggagaagcctaaa 259
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 230 bits (116), Expect = 4e-57 Identities = 202/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 329 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 388 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 389 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 448 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 449 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 508 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 509 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 || || | || ||||||||||||||||||||||||||||||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgact 564 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 122 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 181 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 182 agtagcggcgagcgaaatgggagcagcctaaacc 215 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcgg 35 ||||||||||| ||||||||||| ||||||| Sbjct: 12 gaagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 230 bits (116), Expect = 4e-57 Identities = 241/282 (85%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 280 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 339 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 340 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 399 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 400 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 459 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 460 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 519 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 520 tctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcat 4648 Score = 216 bits (109), Expect = 6e-53 Identities = 185/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 4084 gaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggaga 4143 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||| || |||| || |||||| ||||||||||| || | |||||| ||| Sbjct: 4144 ttcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaac 4202 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 4203 ctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagt 4262 Query: 185 agcggcgagcgaaatgggagcagcctaaa 213 |||||||||||||||||||| |||||||| Sbjct: 4263 agcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 230 bits (116), Expect = 4e-57 Identities = 241/282 (85%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 280 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 339 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 340 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 399 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 400 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 459 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 460 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 519 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 520 tctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcat 615 Score = 208 bits (105), Expect = 1e-50 Identities = 184/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 51 gaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||| || |||| || |||||| ||||||| ||| || | |||||| ||| Sbjct: 111 ttcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaac 169 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 170 ctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagt 229 Query: 185 agcggcgagcgaaatgggagcagcctaaa 213 |||||||||||||||||||| |||||||| Sbjct: 230 agcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 230 bits (116), Expect = 4e-57 Identities = 241/282 (85%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 280 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 339 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 340 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 399 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 400 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 459 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 460 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 519 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 520 tctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcat 615 Score = 216 bits (109), Expect = 6e-53 Identities = 185/209 (88%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| |||||||||||||||||||||||| ||||| | ||||||||||||||| Sbjct: 51 gaagggcgtagtaagcgacgaaatgcttcggggagtcgaaaacaggcatagatccggaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| ||| || |||| || |||||| ||||||||||| || | |||||| ||| Sbjct: 111 ttcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaac 169 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 170 ctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgagt 229 Query: 185 agcggcgagcgaaatgggagcagcctaaa 213 |||||||||||||||||||| |||||||| Sbjct: 230 agcggcgagcgaaatgggagaagcctaaa 258
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 228 bits (115), Expect = 2e-56 Identities = 198/224 (88%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgact 594 Score = 145 bits (73), Expect = 2e-31 Identities = 166/197 (84%) Strand = Plus / Plus Query: 20 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 79 |||||| | ||| ||||||| || || ||||| | ||||||||||||||| ||| || || Sbjct: 53 cgacgatacgctccggggagctggaagtaagcttcgatccggagattcccgaatggggca 112 Query: 80 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 139 |||| ||| |||||||||| ||| ||||| |||| |||| || |||||||||| Sbjct: 113 acctcaaggactccctgctgaattcataggcagggtagaggaaacccggtgaactgaaac 172 Query: 140 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 199 |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 173 atcttagtagccggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaac 232 Query: 200 gggagcagcctaaaccg 216 |||| |||||||||||| Sbjct: 233 gggaccagcctaaaccg 249
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 477 gtgaaa 482 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 581
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||| ||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 ag 204 || Sbjct: 245 ag 246 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 477 gtgaaa 482 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 581
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 1e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 agcagcctaa 212 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 216 bits (109), Expect = 6e-53 Identities = 199/226 (88%), Gaps = 6/226 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 453 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactc 559 | | |||||||||||||||||||||||||||||||||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactc 575 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaac 214 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 212 bits (107), Expect = 9e-52 Identities = 196/225 (87%), Gaps = 3/225 (1%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | |||| ||||||||||||||||||||||||||||||||||| Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 170 bits (86), Expect = 3e-39 Identities = 183/213 (85%), Gaps = 3/213 (1%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| ||||||||||||||||||| | || || ||| || | ||||||| Sbjct: 454 gaagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaacccggaga 511 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| |||||| |||||| | ||||||| |||||||| ||| || | |||||||||| Sbjct: 512 ttcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaac 570 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 |||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| Sbjct: 571 ctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttagt 630 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgt 217 || ||||||||||| |||| ||||||||||||| Sbjct: 631 agtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 212 bits (107), Expect = 9e-52 Identities = 196/224 (87%), Gaps = 5/224 (2%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 515 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 175 ttcccgtagtagcggcgagcgaaatggga 203 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 9e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccg 485 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 20 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 79 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 80 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 139 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 140 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 199 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 200 gggagcagcctaaacc 215 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 297 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 356 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 357 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 416 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 417 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 476 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 477 gtgaaa 482 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 24 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 82 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 83 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 142 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 143 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 202 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 203 ag 204 || Sbjct: 245 ag 246 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 521 ctctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 |||||||||||||| || |||||||||||||||| |||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcat 582
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 208 bits (105), Expect = 1e-50 Identities = 201/233 (86%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| ||||||||||||||||||||||| || || ||| ||||||||| ||| Sbjct: 51 gaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtatagatccgaaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| |||||| |||||| || ||| |||| ||| ||| | |||| ||||| ||| Sbjct: 111 ttcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaac 170 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 || | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||| Sbjct: 171 ctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagt 230 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 || ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 231 agtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 339 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 398 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 399 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 458 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 459 tgggtagtgaaatagaacgtgaaacc 484 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgact 601
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 111 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 170 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 171 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 215 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 194 cgaaatgggagcagcctaaacc 215 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 454 cc 455 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 113 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 172 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 173 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 525 gaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgact 595 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 1 cgaggaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccg 60 ||||||||||||| | | ||||||||||||||||||||||| ||| | || ||||||| Sbjct: 47 cgaggaagggcgtggttaccgacgaaatgcttcggggagttggaaagaggctgagatccg 106 Query: 61 gagat 65 ||||| Sbjct: 107 gagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 339 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 398 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 399 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 458 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 459 tgggtagtgaaatagaacgtgaaacc 484 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 172 bits (87), Expect = 8e-40 Identities = 195/231 (84%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| ||||||||||||||||||||||| || || ||| ||| ||||| ||| Sbjct: 1818 gaagggcgtagtaagcgacgaaatgcttcggggagctgcgaacaagtataaatccgaaga 1877 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| |||||| ||||| || ||| |||| |||| || | |||| ||||| ||| Sbjct: 1878 ttcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaac 1937 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 || | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||| Sbjct: 1938 ctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagt 1997 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 235 || ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1998 agtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 194 cgaaatgggagcagcctaaacc 215 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgact 780
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 190 cgagcgaaatgggagcagcctaaac 214 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 194 cgaaatgggagcagcctaaacc 215 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgact 628
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 198 bits (100), Expect = 1e-47 Identities = 197/226 (87%), Gaps = 10/226 (4%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 512 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | || | |||||||||||||||||||||||||||||||||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgact 653 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgact 151772 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgact 42431
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgact 669 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 6e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 190 cgagcgaaatgggagcagcctaaac 214 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgact 615 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgact 603
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgact 688
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 196 bits (99), Expect = 5e-47 Identities = 199/225 (88%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 453 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| | |||||||||||||||||||||||||||||||||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 455 ccagtgggtagtgaaatagaacgtgaaacc 484 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589 Score = 69.9 bits (35), Expect = 9e-09 Identities = 68/79 (86%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||| | || |||||||| ||||||||||| || ||| ||||| |||||||||| Sbjct: 30 gaagggcgtggaaaccgacgaaacgcttcggggagctggaaacaagcaatgatccggaga 89 Query: 65 ttcccaaataggtcaacct 83 ||||| |||||| |||||| Sbjct: 90 ttcccgaatagggcaacct 108
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 443 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 502 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 503 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 552 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 339 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 398 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 399 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 458 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 459 tgggtagtgaaatagaacgtgaaacc 484 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 192 bits (97), Expect = 9e-46 Identities = 199/233 (85%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| |||||||||||||||| |||||| || || ||| ||||||||| ||| Sbjct: 3085 gaagggcgtagtaagcgacgaaatgctttggggagctgcgaacaagtatagatccgaaga 3144 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| |||||| |||||| || ||| |||| ||| ||| |||| ||||| ||| Sbjct: 3145 ttcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaac 3204 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 || | ||||||||||||||||||||| ||||||| | |||||||||||||||||| |||| Sbjct: 3205 ctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttagt 3264 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 237 || ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3265 agtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgact 3635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 194 bits (98), Expect = 2e-46 Identities = 190/220 (86%), Gaps = 3/220 (1%) Strand = Plus / Plus Query: 339 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 398 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 399 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 458 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 459 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 518 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 519 atctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | || ||||||||||||||||||||||||||||||||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgact 601 Score = 188 bits (95), Expect = 1e-44 Identities = 197/231 (85%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| |||||||||||||||||||||| || || ||||||| ||||| ||| Sbjct: 51 gaagggcgtagtcagcgacgaaatgcttcggggagctgcgaacaagcataaatccgaaga 110 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| |||||| ||||| || ||| |||| |||| || | |||| ||||| ||| Sbjct: 111 ttcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaac 170 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 || | ||||||||||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 171 ctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcagt 230 Query: 185 agcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 235 || ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 231 agtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 455 ccagtgggtagtgaaatagaacgtgaaacc 484 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 5e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 20 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 79 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 80 acct 83 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 338 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 397 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 398 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 457 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 458 gtgggtagtgaaatagaacgtgaaaccgt 486 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 531 gtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgact 218
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 395 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 511 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 512 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 194 cgaa 197 |||| Sbjct: 238 cgaa 241
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 395 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 511 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 512 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 603 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 194 cgaa 197 |||| Sbjct: 219 cgaa 222
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 453 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 513 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 514 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 192 bits (97), Expect = 9e-46 Identities = 197/227 (86%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 395 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 511 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 512 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | | | | |||||||||||||||||||||||||||||||||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgact 622 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 134 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 193 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 194 cgaa 197 |||| Sbjct: 238 cgaa 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 69.9 bits (35), Expect = 9e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgact 612 Score = 46.1 bits (23), Expect = 0.12 Identities = 47/55 (85%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 83 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 3e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||| |||||||||||||||||||||||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgact 620
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 188 bits (95), Expect = 1e-44 Identities = 190/221 (85%), Gaps = 3/221 (1%) Strand = Plus / Plus Query: 338 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 397 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 398 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 457 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 458 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 517 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 518 gatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | ||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgact 218
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 512 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 188 bits (95), Expect = 1e-44 Identities = 195/226 (86%), Gaps = 8/226 (3%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 512 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| || |||||||||||||| ||||||||||||||||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgact 606 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 510 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 510 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 116 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 176 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 116 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 176 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgact 122020 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||||||| |||||||| || ||||||| || || |||| |||||||||| Sbjct: 171468 gaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggaga 171409 Query: 65 ttcccaaataggtcaacct 83 ||||| |||||| |||||| Sbjct: 171408 ttcccgaatagggcaacct 171390 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||||||| |||||||| || ||||||| || || |||| |||||||||| Sbjct: 121458 gaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggaga 121517 Query: 65 ttcccaaataggtcaacct 83 ||||| |||||| |||||| Sbjct: 121518 ttcccgaatagggcaacct 121536
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Minus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 453 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 454 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 512 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 || ||||||||||||||||||||||||||||||||||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 155618 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 12/226 (5%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 453 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 454 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 512 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 513 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 || ||||||||||||||||||||||||||||||||||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgact 78274 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 215 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 215 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 88 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 156227 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 156168 Query: 89 a 89 | Sbjct: 156167 a 156167 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 88 ||||||||||| || || |||||| |||||| |||| ||| |||||| |||||| |||| Sbjct: 77665 gcttcggggagctggtaacaagcatcgatccgaagatccccgaatagggcaacctcttaa 77724 Query: 89 a 89 | Sbjct: 77725 a 77725
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 5e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 510 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 116 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 176 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgact 611 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 |||||||||||||| |||||||| || ||||||| || || |||| |||||||||| Sbjct: 49 gaagggcgtagcaaccgacgaaaccctccggggagctggaagcaagctctgatccggaga 108 Query: 65 ttcccaaataggtcaacct 83 ||||| |||||| |||||| Sbjct: 109 ttcccgaatagggcaacct 127
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 453 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 454 cccagtgggtagtgaaatagaacgtgaaaccgt 486 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 8e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgt 486 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 159 bits (80), Expect = 1e-35 Identities = 179/212 (84%) Strand = Plus / Plus Query: 5 gaagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggaga 64 ||||||||||| | |||||| | ||||||||||| || || |||| | |||||| ||| Sbjct: 38 gaagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaaga 97 Query: 65 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 124 ||||| |||||| ||||||| || ||| |||| ||||| ||| |||| |||||||||| Sbjct: 98 ttcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaac 157 Query: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 184 | |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| |||| Sbjct: 158 ccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagt 217 Query: 185 agcggcgagcgaaatgggagcagcctaaaccg 216 || ||||||||||| |||| ||| |||||||| Sbjct: 218 agtggcgagcgaaaagggatcagtctaaaccg 249 Score = 73.8 bits (37), Expect = 5e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||||||||||||||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgact 592
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 178 bits (90), Expect = 1e-41 Identities = 198/228 (86%), Gaps = 12/228 (5%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 453 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 454 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 510 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 511 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 558 | ||| || |||||||||||||||||||||||||||||||||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgact 602 Score = 113 bits (57), Expect = 6e-22 Identities = 160/193 (82%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 23 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 82 ||||| ||||||||||| || || |||||| |||||| |||| ||| |||||| ||||| Sbjct: 49 cgaaacgcttcggggagctggcaacaagcatcgatccgaagatccccgaatagggcaacc 108 Query: 83 tttta-aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 141 | ||| ||||||| |||||| ||| | || |||| |||| ||||| |||||||| Sbjct: 109 tcttagaactgcccactgaattcataggtgggtcagaggcaactcagcgaattgaaacat 168 Query: 142 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 201 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 169 cttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagcggcgagcggaatgg 228 Query: 202 gagcagcctaaac 214 || |||||||||| Sbjct: 229 gaacagcctaaac 241
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 455 ccagtgggtagtgaaatagaacgtgaaacc 484 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 88 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 89 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 148 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 149 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 208 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 209 ctaaacc 215 ||||||| Sbjct: 253 ctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 455 ccagtgggtagtgaaatagaacgtgaaacc 484 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 130 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 189 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 190 cgagcgaaatgggagcagcctaaacc 215 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 455 ccagtgggtagtgaaatagaacgtgaaacc 484 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 29 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 88 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 89 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 148 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 149 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 208 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 209 ctaaacc 215 ||||||| Sbjct: 253 ctaaacc 259 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||||||||||||||||||||||||||||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgact 617
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 338 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 397 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 398 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 457 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 458 gtgggtagtgaaatagaacgtgaaaccgt 486 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 522 tctgaccgcgtgcctgttgaagaatgagccggcga 556 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 455 ccagt-gggtagtgaaatagaacgtgaaaccgt 486 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 115 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 174 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 175 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 216 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||||||| ||||||||||||||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgact 748
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 5e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 131 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 190 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 191 gagcgaaatgggagcagcctaaacc 215 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgact 439
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtg 487 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 128 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 187 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 188 ggcgagcgaaatgggagcagcctaaacc 215 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 524 tgaccgcgtgcctgttgaagaatgagccggcgact 558 |||||| |||||||||||||||||||||||||||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgact 452
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 176 bits (89), Expect = 5e-41 Identities = 194/225 (86%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 335 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 394 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 395 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 454 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 455 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 514 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 515 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgact 558 ||| | || ||||||||||||||||||||||||||||||||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgact 784 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 116 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 176 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 215 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 454 c 454 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 589 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 257 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 306 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 393 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 394 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 453 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 454 c 454 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 121 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 180 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 181 tagtagcggcgagcgaaatgggagcagcctaaaccg 216 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 523 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 561 ||||||||||||||||||||||||||||||||||||||| Sbjct: 564 ctgaccgcgtgcctgttgaagaatgagccggcgactcat 602 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Plus Query: 257 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 306 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,958,654 Number of Sequences: 3902068 Number of extensions: 3958654 Number of successful extensions: 119109 Number of sequences better than 10.0: 26617 Number of HSP's better than 10.0 without gapping: 26445 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74974 Number of HSP's gapped (non-prelim): 42180 length of query: 561 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 538 effective length of database: 17,143,297,704 effective search space: 9223094164752 effective search space used: 9223094164752 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
