Clone Name	basd14l19
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	SPAST_MOUSE (Q9QYY8) Spastin	158	1e-38
2	SPAST_HUMAN (Q9UBP0) Spastin	158	1e-38
3	ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein...	156	4e-38
4	ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1	154	2e-37
5	ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1	154	2e-37
6	ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1	154	2e-37
7	MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC ...	150	2e-36
8	ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein...	149	6e-36
9	KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like ...	148	1e-35
10	KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-lik...	148	1e-35
11	KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3...	147	2e-35
12	KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-lik...	146	5e-35
13	MSP1_CAEEL (P54815) Protein MSP1 homolog	145	8e-35
14	MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)	143	3e-34
15	KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3...	142	5e-34
16	SAP1_YEAST (P39955) Protein SAP1	139	6e-33
17	KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3...	136	4e-32
18	KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (E...	136	4e-32
19	TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-bind...	136	5e-32
20	KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC ...	135	7e-32
21	KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (E...	135	1e-31
22	VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants	134	2e-31
23	VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ...	127	2e-29
24	CDCH_HALSA (Q9HPF0) Protein cdcH	122	8e-28
25	VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)	122	1e-27
26	VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)	120	4e-27
27	CDAT_PLAF7 (P46468) Putative cell division cycle ATPase	119	5e-27
28	VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a	119	5e-27
29	VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) ...	119	5e-27
30	VAT_THEAC (O05209) VCP-like ATPase	115	7e-26
31	Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297	115	9e-26
32	PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso...	114	3e-25
33	Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156	113	4e-25
34	CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48	111	1e-24
35	TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER...	111	2e-24
36	TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER...	111	2e-24
37	TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T...	111	2e-24
38	TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T...	111	2e-24
39	CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h...	110	2e-24
40	CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog	110	3e-24
41	TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T...	109	7e-24
42	CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val...	109	7e-24
43	CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ...	109	7e-24
44	CDC48_YEAST (P25694) Cell division control protein 48	108	1e-23
45	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	107	2e-23
46	CD48A_ARATH (P54609) Cell division control protein 48 homolog A ...	107	2e-23
47	SAV_SULAC (Q07590) SAV protein	107	2e-23
48	PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso...	106	4e-23
49	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	104	2e-22
50	PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteaso...	104	2e-22
51	PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteaso...	104	2e-22
52	PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteaso...	103	3e-22
53	TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h...	102	6e-22
54	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	102	8e-22
55	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	102	8e-22
56	TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h...	102	8e-22
57	RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7	102	1e-21
58	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	101	1e-21
59	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	101	1e-21
60	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	101	1e-21
61	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	101	1e-21
62	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	101	1e-21
63	PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso...	101	1e-21
64	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	100	3e-21
65	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	100	3e-21
66	PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso...	100	3e-21
67	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	100	5e-21
68	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	99	9e-21
69	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	99	1e-20
70	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	98	2e-20
71	CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C ...	98	2e-20
72	PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A	98	2e-20
73	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	98	2e-20
74	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	97	3e-20
75	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	97	3e-20
76	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	97	3e-20
77	PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteaso...	97	3e-20
78	PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteaso...	97	4e-20
79	FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2...	97	4e-20
80	PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteaso...	96	6e-20
81	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	96	6e-20
82	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	96	6e-20
83	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	96	8e-20
84	NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl...	96	8e-20
85	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	96	8e-20
86	PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin...	96	8e-20
87	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	96	1e-19
88	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	96	1e-19
89	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	96	1e-19
90	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	96	1e-19
91	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	96	1e-19
92	PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteaso...	95	1e-19
93	PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S1...	94	2e-19
94	PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso...	94	2e-19
95	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	94	2e-19
96	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	94	2e-19
97	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	94	3e-19
98	NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl...	94	4e-19
99	PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteaso...	94	4e-19
100	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	94	4e-19
101	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	93	5e-19
102	PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteaso...	93	5e-19
103	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	93	5e-19
104	PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ...	93	6e-19
105	PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog	93	6e-19
106	AFG2_YEAST (P32794) Protein AFG2	93	6e-19
107	FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2...	92	8e-19
108	FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2...	92	8e-19
109	PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxi...	92	8e-19
110	PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)	92	8e-19
111	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	92	1e-18
112	PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B	92	1e-18
113	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	92	1e-18
114	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	91	2e-18
115	PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ...	91	2e-18
116	PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4	91	2e-18
117	PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote...	91	2e-18
118	PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote...	91	2e-18
119	PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote...	91	2e-18
120	PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ...	91	2e-18
121	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	91	2e-18
122	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	91	3e-18
123	PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	91	3e-18
124	PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ...	90	4e-18
125	PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-bindi...	90	5e-18
126	PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)...	90	5e-18
127	PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)...	90	5e-18
128	PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-b...	90	5e-18
129	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	90	5e-18
130	PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4	89	7e-18
131	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	89	7e-18
132	PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Prote...	89	7e-18
133	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	89	1e-17
134	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	89	1e-17
135	PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase ...	89	1e-17
136	PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-bindi...	89	1e-17
137	PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-bin...	89	1e-17
138	PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-bin...	88	2e-17
139	PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (T...	88	2e-17
140	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	88	2e-17
141	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	88	2e-17
142	PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)	87	3e-17
143	PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S prote...	87	4e-17
144	PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S prote...	87	4e-17
145	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	87	5e-17
146	PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog ...	87	5e-17
147	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	87	5e-17
148	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	86	6e-17
149	PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote...	86	6e-17
150	PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (P...	86	6e-17
151	PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)	86	6e-17
152	PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog	86	6e-17
153	PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S prote...	86	1e-16
154	PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S prote...	86	1e-16
155	PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 pro...	85	1e-16
156	PRS8_DROME (O18413) 26S protease regulatory subunit 8	85	1e-16
157	PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease sub...	85	1e-16
158	PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Pro...	85	2e-16
159	PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (P...	85	2e-16
160	PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (P...	85	2e-16
161	PRS2_METJA (Q58889) Putative 26S protease regulatory subunit hom...	85	2e-16
162	PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome ...	85	2e-16
163	PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome ...	85	2e-16
164	PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasom...	85	2e-16
165	PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasom...	85	2e-16
166	PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasom...	85	2e-16
167	PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homo...	84	2e-16
168	PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (P...	84	2e-16
169	PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	84	3e-16
170	PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (T...	84	4e-16
171	PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7	84	4e-16
172	PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog ...	83	5e-16
173	PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog	83	5e-16
174	PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (P...	83	5e-16
175	CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ...	83	7e-16
176	PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (S...	83	7e-16
177	PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot...	82	9e-16
178	PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot...	82	9e-16
179	PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot...	82	9e-16
180	PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi...	82	1e-15
181	PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)	82	1e-15
182	PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)	82	1e-15
183	PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-bindi...	82	1e-15
184	TBP7_YEAST (P40340) TAT-binding homolog 7	82	1e-15
185	ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2	82	1e-15
186	PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)	82	1e-15
187	PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)	81	2e-15
188	PRS2_METTM (P42811) Putative 26S protease regulatory subunit hom...	81	2e-15
189	ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2	81	3e-15
190	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	80	3e-15
191	PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	80	4e-15
192	PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog ...	80	4e-15
193	PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (T...	80	4e-15
194	PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxiso...	80	4e-15
195	PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C...	80	6e-15
196	PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog	80	6e-15
197	ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2	80	6e-15
198	PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxi...	79	7e-15
199	PRS2_METTH (O27092) Putative 26S protease regulatory subunit hom...	79	7e-15
200	PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)	79	1e-14
201	TBP7_CAEEL (P54816) TAT-binding homolog 7	78	2e-14
202	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	77	5e-14
203	PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (...	76	6e-14
204	PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	76	6e-14
205	PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog	76	8e-14
206	PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-b...	75	1e-13
207	NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	75	2e-13
208	NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	75	2e-13
209	NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	75	2e-13
210	PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)	74	4e-13
211	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	71	2e-12
212	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	71	3e-12
213	NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleim...	70	3e-12
214	PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) ...	70	4e-12
215	NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	69	1e-11
216	NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular...	68	2e-11
217	Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL	66	8e-11
218	SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog	65	1e-10
219	NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleim...	65	2e-10
220	SEC18_YEAST (P18759) Vesicular-fusion protein SEC18	65	2e-10
221	SEC18_CANAL (P34732) Vesicular-fusion protein SEC18	63	5e-10
222	YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)	61	3e-09
223	Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c	59	8e-09
224	Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175	59	8e-09
225	Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316	59	1e-08
226	YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)	57	4e-08
227	YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)	55	1e-07
228	YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46	50	4e-06
229	FTSH_CHLVU (P56369) Cell division protein ftsH homolog	50	4e-06
230	PCH2_YEAST (P38126) Pachytene checkpoint protein 2	46	9e-05
231	AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)	42	0.001
232	CLPB_RALSO (Q8XZR0) Chaperone clpB	40	0.006
233	CLPB_CHRVO (Q7NWN7) Chaperone clpB	39	0.008
234	CLPA_ECOLI (P0ABH9) ATP-dependent Clp protease ATP-binding subun...	39	0.011
235	CLPA_ECOL6 (P0ABI0) ATP-dependent Clp protease ATP-binding subun...	39	0.011
236	CLPA_ECO57 (P0ABI1) ATP-dependent Clp protease ATP-binding subun...	39	0.011
237	CLPB_XANCP (Q8P6A0) Chaperone clpB	39	0.011
238	CLPB_XANAC (Q8PHQ4) Chaperone clpB	39	0.011
239	CLPB_BORPA (Q7W9E6) Chaperone clpB	39	0.014
240	CLPB_BORBR (Q7WHB6) Chaperone clpB	39	0.014
241	CLPB_PASMU (Q9CKC0) Chaperone clpB	38	0.019
242	CLPB_CAMJE (Q9PI02) Chaperone clpB	38	0.019
243	CLPB_NEIMB (Q9JYQ8) Chaperone clpB	38	0.024
244	CLPB_NEIMA (Q9JTP9) Chaperone clpB	38	0.024
245	CLPB_BORPE (Q7VYV6) Chaperone clpB	38	0.024
246	CLPB_NITEU (Q82SD8) Chaperone clpB	38	0.024
247	CLPB_XYLFA (Q9PGC1) Chaperone clpB	37	0.032
248	CLPB_XYLFT (Q87AX8) Chaperone clpB	37	0.042
249	CLPB_VIBPA (Q87S63) Chaperone clpB	36	0.071
250	CLPB_WOLPM (Q73IE4) Chaperone clpB	36	0.071
251	CLPB_HAEDU (Q7VNH1) Chaperone clpB	36	0.071
252	CLPB2_STRAW (Q826F2) Chaperone clpB 2	36	0.071
253	CLPB_DEIRA (Q9RVI3) Chaperone clpB	36	0.071
254	CLPB_BLOFL (Q7VQF3) Chaperone clpB	36	0.093
255	HSLU_THEMA (Q9WYZ2) ATP-dependent hsl protease ATP-binding subun...	35	0.12
256	CLPB_WOLSU (Q7M9X4) Chaperone clpB	35	0.12
257	CLPB_VIBCH (Q9KU18) Chaperone clpB	35	0.12
258	CLPB_SHEON (Q8EBE6) Chaperone clpB	35	0.12
259	CLPB_TREDE (Q73K92) Chaperone clpB	35	0.12
260	CLPB_COXBU (Q83F55) Chaperone clpB	35	0.12
261	CLPB_PARUW (Q6MD97) Chaperone clpB	35	0.12
262	CLPB_AQUAE (O67588) Chaperone clpB	35	0.12
263	CLPB_TREPA (O83110) Chaperone clpB	35	0.12
264	CLPB_HELPY (P71404) Chaperone clpB	35	0.16
265	CLPB_HELPJ (Q9ZMH1) Chaperone clpB	35	0.16
266	CLPB_PSESM (Q889C2) Chaperone clpB	35	0.16
267	CLPB_GEOSL (Q74FF1) Chaperone clpB	35	0.16
268	ERD1_ARATH (P42762) ERD1 protein, chloroplast precursor	35	0.21
269	CLPB_PHOPR (Q6LMY0) Chaperone clpB	35	0.21
270	CLPB_VIBVY (Q7MNK1) Chaperone clpB	34	0.27
271	CLPB_VIBVU (Q8DEV2) Chaperone clpB	34	0.27
272	CLPB_CAUCR (Q9A9T4) Chaperone clpB	34	0.27
273	HLYB_TREHY (Q54316) Hemolysin B	34	0.27
274	CLPB_BRUSU (Q7CEG6) Chaperone clpB	34	0.27
275	CLPA_BRANA (P46523) ATP-dependent Clp protease ATP-binding subun...	34	0.27
276	CLPB_PROMP (Q7V2A3) Chaperone clpB	34	0.27
277	CLPB_HAEIN (P44403) Chaperone clpB	34	0.35
278	CLPB_PSEPK (Q88Q71) Chaperone clpB	34	0.35
279	CLPB_HELHP (Q7VJY3) Chaperone clpB	33	0.46
280	CLPB_RHIME (Q92MK7) Chaperone clpB	33	0.46
281	CLPB_PSEAE (Q9HVN5) Chaperone clpB	33	0.46
282	CLPB_BRUME (Q8YJ91) Chaperone clpB	33	0.46
283	CLPB_CHLTR (O84115) Chaperone clpB	33	0.46
284	CLPB_CHLMU (Q9PKS5) Chaperone clpB	33	0.46
285	CLPB_CHLCV (Q822Q4) Chaperone clpB	33	0.60
286	CLPAB_LYCES (P31542) ATP-dependent Clp protease ATP-binding subu...	33	0.60
287	CLPB_PORGI (Q7MVE7) Chaperone clpB	33	0.60
288	CLPB_BACNO (P17422) Chaperone clpB	33	0.79
289	CLPB_YERPE (Q74X11) Chaperone clpB	32	1.0
290	CLPB_SHIFL (Q7UBW5) Chaperone clpB	32	1.0
291	CLPB_SALTY (Q7CQ01) Chaperone clpB	32	1.0
292	CLPB_SALTI (Q7AMH5) Chaperone clpB	32	1.0
293	CLPB_ECOLI (P63284) Chaperone clpB (Heat-shock protein F84.1)	32	1.0
294	CLPB_ECOL6 (P63286) Chaperone clpB	32	1.0
295	CLPB_ECO57 (P63285) Chaperone clpB	32	1.0
296	CLPB_BDEBA (Q6MIV0) Chaperone clpB	32	1.0
297	CLPB_RHOPA (Q6N1H2) Chaperone clpB	32	1.0
298	CLPB_AGRT5 (Q7CU92) Chaperone clpB	32	1.0
299	CLPB_PHOLL (Q7N788) Chaperone clpB	32	1.3
300	CLPB_RHILO (Q98G96) Chaperone clpB	32	1.3
301	CLPAA_LYCES (P31541) ATP-dependent Clp protease ATP-binding subu...	32	1.3
302	CLPB_CHLPN (Q7AJA9) Chaperone clpB	32	1.8
303	CLPB_LEPIN (Q8F509) Chaperone clpB	32	1.8
304	CLPB_LEPIC (Q72QU2) Chaperone clpB	32	1.8
305	CLPC_PEA (P35100) ATP-dependent Clp protease ATP-binding subunit...	31	2.3
306	CLPB_PLEBO (O87444) Chaperone clpB	31	2.3
307	CLPB1_SYNEL (Q8DJ40) Chaperone clpB 1	31	2.3
308	HSP78_YEAST (P33416) Heat shock protein 78, mitochondrial precursor	31	3.0
309	HSLU_LEPIN (Q8F3Q5) ATP-dependent hsl protease ATP-binding subun...	31	3.0
310	HSLU_LEPIC (Q72RY7) ATP-dependent hsl protease ATP-binding subun...	31	3.0
311	SYA_BORPE (Q7VXE1) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-...	31	3.0
312	CLPB1_SYNP7 (P53533) Chaperone clpB 1	31	3.0
313	CLS_SHIFL (Q83RM8) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	30	3.9
314	CLS_ECOLI (P0A6H8) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	30	3.9
315	CLS_ECOL6 (P0A6H9) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	30	3.9
316	CLS_ECO57 (Q8XCC6) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	30	3.9
317	BIR1F_MOUSE (Q9JIB6) Baculoviral IAP repeat-containing protein 1...	30	3.9
318	CLPB_BRAJA (Q89UL2) Chaperone clpB	30	3.9
319	BIR1G_MOUSE (Q9JIB3) Baculoviral IAP repeat-containing protein 1...	30	3.9
320	CLPL_LACLA (Q06716) ATP-dependent protease ATP-binding subunit clpL	30	3.9
321	CLS_SALTY (P63798) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	30	5.1
322	CLS_SALTI (P63799) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli...	30	5.1
323	CLPB_CLOTE (Q898C7) Chaperone clpB	30	5.1
324	CLPB_YEREN (Q9F746) Chaperone clpB	30	6.7
325	TETO_STRPN (P72533) Tetracycline resistance protein tetO (Tet(O))	29	8.7
326	CLPC_MYCTU (P0A522) Probable ATP-dependent Clp protease ATP-bind...	29	8.7
327	CLPC_MYCLE (P24428) Probable ATP-dependent Clp protease ATP-bind...	29	8.7
328	CLPC_MYCBO (P0A523) Probable ATP-dependent Clp protease ATP-bind...	29	8.7

---

>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score =  158 bits (400), Expect = 1e-38
 Identities = 82/167 (49%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A ++ A+F N+S +++TSK+ GE EK VRALF++A ++ P+IIF+DEVDS+L +R R GE
Sbjct: 394 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER-REGE 452

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           H+A R++K EF+  +DG+ S   +R+LV+ ATNRP +LDEA++RRF +R+ V LP +E+R
Sbjct: 453 HDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 512

Query: 363 ELILRTVLSKEKVD-KDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            L+L+ +L K+       E  +LA MT+GYSGSDL  L   AA  P+
Sbjct: 513 LLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 559

---

>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score =  158 bits (400), Expect = 1e-38
 Identities = 82/167 (49%), Positives = 121/167 (72%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A ++ A+F N+S +++TSK+ GE EK VRALF++A ++ P+IIF+DEVDS+L +R R GE
Sbjct: 396 AAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCER-REGE 454

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           H+A R++K EF+  +DG+ S   +R+LV+ ATNRP +LDEA++RRF +R+ V LP +E+R
Sbjct: 455 HDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVSLPNEETR 514

Query: 363 ELILRTVLSKEKVD-KDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            L+L+ +L K+       E  +LA MT+GYSGSDL  L   AA  P+
Sbjct: 515 LLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPI 561

---

>ATD1A_BRARE (Q7ZZ25) ATPase family AAA domain-containing protein 1-A|
          Length = 380

 Score =  156 bits (395), Expect = 4e-38
 Identities = 80/162 (49%), Positives = 106/162 (65%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A  +G  FIN+  ST+T KW+GE +K   A+FSLA K+ P IIF+DE+DS L  R+   +
Sbjct: 150 AKASGCRFINLQASTLTDKWYGESQKLTAAVFSLAVKIQPCIIFLDEIDSFLRNRSSM-D 208

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HEA   +K +FMS WDG+ +    +++V+ ATNRP D+D AI+RR      VGLP    R
Sbjct: 209 HEATAMMKAQFMSLWDGLDTGENSQVMVMGATNRPQDVDAAILRRMPTAFHVGLPNAAQR 268

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           E ILR +LS E +   I  KE+A+ +EGYSGSDLK LC  AA
Sbjct: 269 EEILRLILSGENLSNAINLKEIASQSEGYSGSDLKELCRDAA 310

---

>ATAD1_RAT (Q505J9) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score =  154 bits (389), Expect = 2e-37
 Identities = 76/162 (46%), Positives = 108/162 (66%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +AG  FIN+  ST+T KW+GE +K   A+FSLA K+ P+IIF+DE+DS L  R+   +
Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SD 205

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HEA   +K +FMS WDG+ +    +++V+ ATNRP DLD AI+RR   R  +  P  + R
Sbjct: 206 HEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQR 265

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           E IL+ +L  E VD+ ++  E+A  T+G+SGSDLK +C  AA
Sbjct: 266 EAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAA 307

---

>ATAD1_MOUSE (Q9D5T0) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score =  154 bits (389), Expect = 2e-37
 Identities = 76/162 (46%), Positives = 108/162 (66%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +AG  FIN+  ST+T KW+GE +K   A+FSLA K+ P+IIF+DE+DS L  R+   +
Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SD 205

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HEA   +K +FMS WDG+ +    +++V+ ATNRP DLD AI+RR   R  +  P  + R
Sbjct: 206 HEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQR 265

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           E IL+ +L  E VD+ ++  E+A  T+G+SGSDLK +C  AA
Sbjct: 266 EAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAA 307

---

>ATAD1_HUMAN (Q8NBU5) ATPase family AAA domain-containing protein 1|
          Length = 361

 Score =  154 bits (389), Expect = 2e-37
 Identities = 76/162 (46%), Positives = 108/162 (66%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +AG  FIN+  ST+T KW+GE +K   A+FSLA K+ P+IIF+DE+DS L  R+   +
Sbjct: 147 AKEAGCRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SD 205

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HEA   +K +FMS WDG+ +    +++V+ ATNRP DLD AI+RR   R  +  P  + R
Sbjct: 206 HEATAMMKAQFMSLWDGLDTDHSCQVIVMGATNRPQDLDSAIMRRMPTRFHINQPALKQR 265

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           E IL+ +L  E VD+ ++  E+A  T+G+SGSDLK +C  AA
Sbjct: 266 EAILKLILKNENVDRHVDLLEVAQETDGFSGSDLKEMCRDAA 307

---

>MEI1_CAEEL (P34808) Meiotic spindle formation protein mei-1 (EC 3.6.4.3)|
           (Katanin ATPase-containing subunit)
          Length = 472

 Score =  150 bits (380), Expect = 2e-36
 Identities = 75/163 (46%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A+++ ++F  VS + ++SKW G+ EK VR LF LA   AP+IIF+DE+D++ GQR   GE
Sbjct: 247 ASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGE 306

Query: 183 HEAMRKIKNEFMSHWDGILSK-SGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQES 359
           HEA R++K+EF+   DG  +K    R+ VLAATN P++LDEA+ RRFE+RI + LP  ++
Sbjct: 307 HEASRRVKSEFLVQMDGSQNKFDSRRVFVLAATNIPWELDEALRRRFEKRIFIPLPDIDA 366

Query: 360 RELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           R+ ++   +       +I Y +LA  TEG+SG+D+ +LC TAA
Sbjct: 367 RKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAA 409

---

>ATD1B_BRARE (Q503W7) ATPase family AAA domain-containing protein 1-B|
          Length = 362

 Score =  149 bits (376), Expect = 6e-36
 Identities = 73/162 (45%), Positives = 106/162 (65%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +AG  FIN+  ST+T KW+GE +K   A+FSLA K+ P+IIF+DE+DS L  R+   +
Sbjct: 151 AKEAGFRFINLQPSTLTDKWYGESQKLAAAVFSLAIKLQPSIIFIDEIDSFLRNRSS-SD 209

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HEA   +K +FMS WDG+ +    +++++ ATNRP DLD AI+RR   R  +  P    R
Sbjct: 210 HEATAMMKAQFMSLWDGLDTDYNCQVIIMGATNRPQDLDSAILRRMPTRFHINQPNVRQR 269

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + IL+ +L  E V+  +E  E+A  T+G+SGSDL+ +C  AA
Sbjct: 270 KDILKLILENENVESAVELSEIAKQTDGFSGSDLREMCRDAA 311

---

>KATL1_RAT (Q5XIK7) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score =  148 bits (374), Expect = 1e-35
 Identities = 75/167 (44%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A + G +F NVS ST+TSK+ GE EK VR LF +A   APT IF+DE+DS+  +R    E
Sbjct: 260 ATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDE 319

Query: 183 HEAMRKIKNEFMSHWDGI-----LSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K+E +   DG+          + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 320 HEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 379

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           T + R  +L+  L + ++D DI  +++A  TEGYSG+D+ N+C  A+
Sbjct: 380 TAKGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDAS 426

---

>KATL1_MOUSE (Q8K0T4) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 488

 Score =  148 bits (373), Expect = 1e-35
 Identities = 74/167 (44%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A + G +F NVS ST+TSK+ GE EK VR LF +A   APT IF+DE+DS+  +R    E
Sbjct: 260 ATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDE 319

Query: 183 HEAMRKIKNEFMSHWDGI-----LSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K+E +   DG+          + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 320 HEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 379

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           T + R  +L+  L + ++D D+  +++A  TEGYSG+D+ N+C  A+
Sbjct: 380 TAKGRAELLKISLREVELDPDVHLEDIADKTEGYSGADITNICRDAS 426

---

>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase)
           (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3
           protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein)
           (AtAAA1)
          Length = 523

 Score =  147 bits (371), Expect = 2e-35
 Identities = 75/168 (44%), Positives = 109/168 (64%), Gaps = 6/168 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A + G +F NVS +T+ SKW GE E+ VR LF LA   AP+ IF+DE+DS+   R   GE
Sbjct: 293 ATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNSRGGSGE 352

Query: 183 HEAMRKIKNEFMSHWDGI----LSKSGER--ILVLAATNRPFDLDEAIIRRFERRIMVGL 344
           HE+ R++K+E +   DG+     ++ G R  ++VLAATN P+D+DEA+ RR E+RI + L
Sbjct: 353 HESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPL 412

Query: 345 PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           P  ESR+ ++   L   +V  D+  +++A  TEGYSG DL N+C  A+
Sbjct: 413 PDFESRKALININLRTVEVASDVNIEDVARRTEGYSGDDLTNVCRDAS 460

---

>KATL1_HUMAN (Q9BW62) Katanin p60 ATPase-containing subunit A-like 1 (EC|
           3.6.4.3) (Katanin p60 subunit A-like 1) (p60
           katanin-like 1)
          Length = 490

 Score =  146 bits (368), Expect = 5e-35
 Identities = 74/167 (44%), Positives = 110/167 (65%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A + G +F NVS ST+TSK+ GE EK VR LF +A   APT IF+DE+DS+  +R    E
Sbjct: 262 ATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSDE 321

Query: 183 HEAMRKIKNEFMSHWDGI-----LSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K+E +   DG+          + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 322 HEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 381

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           T + R  +L+  L + ++D DI+ +++A   EGYSG+D+ N+C  A+
Sbjct: 382 TAKGRAELLKINLREVELDPDIQLEDIAEKIEGYSGADITNVCRDAS 428

---

>MSP1_CAEEL (P54815) Protein MSP1 homolog|
          Length = 342

 Score =  145 bits (366), Expect = 8e-35
 Identities = 73/158 (46%), Positives = 102/158 (64%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A  AG  FIN+ +S +T KW+GE +K   A+FS+A K  PTIIF+DE+DS L  R +  +
Sbjct: 138 ARAAGCRFINLQVSNLTDKWYGESQKLAAAVFSVAQKFQPTIIFIDEIDSFLRDR-QSHD 196

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HE+   +K +FM+ WDG  S SG++I+V+ ATNRP D+D AI+RR   R  V +P  + R
Sbjct: 197 HESTAMMKAQFMTLWDGF-SSSGDQIIVMGATNRPRDVDAAILRRMTARFQVPVPNAKQR 255

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
             IL  +L  EK++  +   E+A   EG SGSDLK +C
Sbjct: 256 SQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVC 293

---

>MSP1_YEAST (P28737) Protein MSP1 (TAT-binding homolog 4)|
          Length = 362

 Score =  143 bits (361), Expect = 3e-34
 Identities = 74/163 (45%), Positives = 110/163 (67%), Gaps = 1/163 (0%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A ++GA+FI++ MS+I  KW+GE  K V A+FSLA K+ P IIF+DE+DS L +R+   +
Sbjct: 147 AKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDSFLRERSST-D 205

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           HE    +K EFM+ WDG+L+    R++++ ATNR  D+D+A +RR  +R +V LP  + R
Sbjct: 206 HEVTATLKAEFMTLWDGLLNNG--RVMIIGATNRINDIDDAFLRRLPKRFLVSLPGSDQR 263

Query: 363 ELILRTVLSKEKVDKD-IEYKELATMTEGYSGSDLKNLCVTAA 488
             IL  +L   K+D+D  + + +A  T+G+SGSDLK LC  AA
Sbjct: 264 YKILSVLLKDTKLDEDEFDLQLIADNTKGFSGSDLKELCREAA 306

---

>KTNA1_STRPU (O61577) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin)
          Length = 516

 Score =  142 bits (359), Expect = 5e-34
 Identities = 72/167 (43%), Positives = 109/167 (65%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A + G +F NVS +++TSK+ GE EK VR LF +A   AP+ IF+DE+DS+  +R    E
Sbjct: 288 ATECGTTFFNVSSASLTSKYHGESEKLVRLLFEMARFYAPSTIFIDEIDSICSKRGTGSE 347

Query: 183 HEAMRKIKNEFMSHWDGIL-----SKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K+E +   DG+       +S + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 348 HEASRRVKSELLIQMDGVSGPSAGEESSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 407

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
             + RE +LR  L +  +  DI+ K +A   +GYSG+D+ N+C  A+
Sbjct: 408 EIDGREQLLRINLKEVPLADDIDLKSIAEKMDGYSGADITNVCRDAS 454

---

>SAP1_YEAST (P39955) Protein SAP1|
          Length = 897

 Score =  139 bits (350), Expect = 6e-33
 Identities = 76/185 (41%), Positives = 116/185 (62%), Gaps = 19/185 (10%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A ++ ++F ++S S++TSK+ GE EK VRALF++A K++P+IIFVDE+DS++G R    E
Sbjct: 659  ATESHSTFFSISASSLTSKYLGESEKLVRALFAIAKKLSPSIIFVDEIDSIMGSRNNENE 718

Query: 183  HEAMRKIKNEFMSHWDGILS------------------KSGERILVLAATNRPFDLDEAI 308
            +E+ R+IKNEF+  W  + S                  +   R+LVLAATN P+ +DEA 
Sbjct: 719  NESSRRIKNEFLVQWSSLSSAAAGSNKSNTNNSDTNGDEDDTRVLVLAATNLPWSIDEAA 778

Query: 309  IRRFERRIMVGLPTQESRELILRTVLSKEK-VDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             RRF RR  + LP  ++R +  + +LS +K    + ++ EL  +TEGYSGSD+ +L   A
Sbjct: 779  RRRFVRRQYIPLPEDQTRHVQFKKLLSHQKHTLTESDFDELVKITEGYSGSDITSLAKDA 838

Query: 486  AYRPV 500
            A  P+
Sbjct: 839  AMGPL 843

---

>KTNA1_XENLA (Q9PUL2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)|
           (Katanin p60 subunit) (p60 katanin) (Fragment)
          Length = 486

 Score =  136 bits (343), Expect = 4e-32
 Identities = 71/167 (42%), Positives = 107/167 (64%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +   +F N+S ST+TSK+ GE EK VR LF +A   APT IF+DE+DS+  +R    E
Sbjct: 260 ATECKTTFFNISSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEE 319

Query: 183 HEAMRKIKNEFMSHWDGILSKS-----GERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K E +   DG+   S      + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 320 HEASRRVKAELLVQMDGVGGASENEDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 379

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + + RE +LR  L + ++  D+  + +A   +GYSG+D+ N+C  A+
Sbjct: 380 SAKGREELLRINLKELELADDVNIECIAENMDGYSGADITNVCRDAS 426

---

>KTNA1_HUMAN (O75449) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score =  136 bits (343), Expect = 4e-32
 Identities = 71/167 (42%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +   +F NVS ST+TSK+ GE EK VR LF +A   +P  IF+DE+DS+  +R    E
Sbjct: 263 ATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEE 322

Query: 183 HEAMRKIKNEFMSHWDGILSKS-----GERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K E +   DG+   S      + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 323 HEASRRVKAELLVQMDGVGGTSENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 382

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + + RE +LR  L + ++  D++   +A   EGYSG+D+ N+C  A+
Sbjct: 383 SAKGREELLRISLRELELADDVDLASIAENMEGYSGADITNVCRDAS 429

---

>TBP6_YEAST (P40328) Probable 26S protease subunit YTA6 (TAT-binding homolog 6)|
          Length = 754

 Score =  136 bits (342), Expect = 5e-32
 Identities = 73/177 (41%), Positives = 116/177 (65%), Gaps = 11/177 (6%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A ++ ++F +VS S++ SK+ GE EK VRALF +A K++P+IIF+DE+DSML  R+   E
Sbjct: 525  ATESNSTFFSVSASSLLSKYLGESEKLVRALFYMAKKLSPSIIFIDEIDSMLTARSD-NE 583

Query: 183  HEAMRKIKNEFMSHWDGILSKSGE----------RILVLAATNRPFDLDEAIIRRFERRI 332
            +E+ R+IK E +  W  + S + +          R+LVL ATN P+ +D+A  RRF R++
Sbjct: 584  NESSRRIKTELLIQWSSLSSATAQSEDRNNTLDSRVLVLGATNLPWAIDDAARRRFSRKL 643

Query: 333  MVGLPTQESRELILRTVLSKEKVD-KDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             + LP  E+R   L+ +++K+K   +D++Y+ +  MTEG+SGSDL +L   AA  P+
Sbjct: 644  YIPLPDYETRLYHLKRLMAKQKNSLQDLDYELITEMTEGFSGSDLTSLAKEAAMEPI 700

---

>KTNA1_RAT (Q6E0V2) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin)
          Length = 491

 Score =  135 bits (341), Expect = 7e-32
 Identities = 71/167 (42%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +   +F NVS ST+TSK+ GE EK VR LF +A   +P  IF+DE+DS+  +R    E
Sbjct: 263 ATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEE 322

Query: 183 HEAMRKIKNEFMSHWDGILSKS-----GERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K E +   DG+   S      + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 323 HEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 382

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + + RE +LR  L + ++  D+    +A   EGYSG+D+ N+C  A+
Sbjct: 383 SAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDAS 429

---

>KTNA1_MOUSE (Q9WV86) Katanin p60 ATPase-containing subunit A1 (EC 3.6.4.3)|
           (Katanin p60 subunit A1) (p60 katanin) (Lipotransin)
          Length = 491

 Score =  135 bits (339), Expect = 1e-31
 Identities = 71/167 (42%), Positives = 105/167 (62%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +   +F NVS ST+TSK+ GE EK VR LF +A   +P  IF+DE+DS+  +R    E
Sbjct: 263 ATECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICSRRGTSEE 322

Query: 183 HEAMRKIKNEFMSHWDGILSKS-----GERILVLAATNRPFDLDEAIIRRFERRIMVGLP 347
           HEA R++K E +   DG+   S      + ++VLAATN P+D+DEA+ RR E+RI + LP
Sbjct: 323 HEASRRMKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRRRLEKRIYIPLP 382

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + + RE +LR  L + ++  D+    +A   EGYSG+D+ N+C  A+
Sbjct: 383 SAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDAS 429

---

>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score =  134 bits (337), Expect = 2e-31
 Identities = 74/169 (43%), Positives = 108/169 (63%), Gaps = 3/169 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +AG++F ++S S + SKW GE E+ VR LF +A +  P+IIF+DE+DS+ G R+  GE
Sbjct: 183 ATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDSLCGSRSE-GE 241

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
            E+ R+IK EF+   +G+  K    +LVL ATN P+ LD AI RRFE+RI + LP   +R
Sbjct: 242 SESSRRIKTEFLVQMNGV-GKDESGVLVLGATNIPWTLDSAIRRRFEKRIYIPLPNAHAR 300

Query: 363 ELILRTVLSKEKVDKDI---EYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             +    L+  K+  ++   ++KELA MT+GYSGSD+  +   A   PV
Sbjct: 301 ARMFE--LNVGKIPSELTSQDFKELAKMTDGYSGSDISIVVRDAIMEPV 347

---

>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score =  127 bits (319), Expect = 2e-29
 Identities = 74/173 (42%), Positives = 104/173 (60%), Gaps = 7/173 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +A ++F +VS S + SKW GE EK V+ LF++A +  P+IIF+DEVD++ G R   GE
Sbjct: 187 ATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGE-GE 245

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
            EA R+IK E +   +G+     + +LVL ATN P+ LD AI RRFERRI + LP   +R
Sbjct: 246 SEASRRIKTELLVQMNGV-GNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAAR 304

Query: 363 ELILR-------TVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             +          VL+KE      +Y+ L  MTEGYSGSD+  +   A  +P+
Sbjct: 305 TTMFEINVGDTPCVLTKE------DYRTLGAMTEGYSGSDIAVVVKDALMQPI 351

---

>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score =  122 bits (306), Expect = 8e-28
 Identities = 67/164 (40%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI+V    + SKW GE EK +R  F  A +VAPT+IF DE+DS+   R + G 
Sbjct: 517  ANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGG 576

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            +    ++ N+ ++  DG+  +  E ++V+AATNRP  +D A+IR  RF+R + VG P  E
Sbjct: 577  NNVSERVVNQLLTELDGL--EEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIE 634

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
             RE IL+       +  D+  +ELA   +GY GSDL N+   AA
Sbjct: 635  GREQILKIHTQDTPLAADVSLRELAERADGYVGSDLANIAREAA 678



 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 57/166 (34%), Positives = 97/166 (58%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+  ASF +++   I SK++GE E+ +R +F  A   +P+IIF+DE+DS+  +R     
Sbjct: 244 ANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDV-T 302

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R++  + ++  DG+  +   +++V+AATNR   +D A+ R  RF+R I +G+P + 
Sbjct: 303 GEVERRVVAQLLTMMDGLEGRG--QVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEI 360

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYR 494
            RE IL+       +  D+    LA  T G+ G+D+++L   AA R
Sbjct: 361 GREEILKIHTRGMPLSDDVNLSTLADDTHGFVGADIESLSKEAAMR 406

---

>VPS4B_MOUSE (P46467) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score =  122 bits (305), Expect = 1e-27
 Identities = 69/162 (42%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMR 197
           ++F ++S S + SKW GE EK V+ LF LA +  P+IIF+DE+DS+ G R+   E EA R
Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAAR 252

Query: 198 KIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESRELILR 377
           +IK EF+    G+     + ILVL ATN P+ LD AI RRFE+RI + LP   +R  + R
Sbjct: 253 RIKTEFLVQMQGV-GVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEAHARAAMFR 311

Query: 378 TVL-SKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             L S +    + +++EL   T+GYSG+D+  +   A  +PV
Sbjct: 312 LHLGSTQNSLTEADFQELGRKTDGYSGADISIIVRDALMQPV 353

---

>VPS4B_HUMAN (O75351) Vacuolar sorting protein 4b (SKD1 protein)|
          Length = 444

 Score =  120 bits (300), Expect = 4e-27
 Identities = 67/162 (41%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMR 197
           ++F ++S S + SKW GE EK V+ LF LA +  P+IIF+DE+DS+ G R+   E EA R
Sbjct: 194 STFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSRSE-NESEAAR 252

Query: 198 KIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESRELILR 377
           +IK EF+    G+     + ILVL ATN P+ LD AI RRFE+RI + LP   +R  + +
Sbjct: 253 RIKTEFLVQMQGV-GVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFK 311

Query: 378 TVL-SKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             L + +    + +++EL   T+GYSG+D+  +   A  +PV
Sbjct: 312 LHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPV 353

---

>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase|
          Length = 1229

 Score =  119 bits (299), Expect = 5e-27
 Identities = 63/163 (38%), Positives = 101/163 (61%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI+V    + + WFGE E NVR LF  A   +P IIF DE+DS+  +R     
Sbjct: 989  ANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTN 1048

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            ++A  ++ N+ ++  DGI  K  + I ++AATNRP  LD+A+ R  R ++ I + LP  +
Sbjct: 1049 NDASDRVINQILTEIDGINEK--KTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLK 1106

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            SR  I + +L    +++D++  ++A  TEG+SG+D+ NLC +A
Sbjct: 1107 SRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGADITNLCQSA 1149



 Score =  107 bits (268), Expect = 2e-23
 Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN++ A    ++   I SK  GE E+ +R +F  A++  P IIF+DE+DS+  +R++   
Sbjct: 582  ANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSK-SN 640

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            +E  +++ ++ ++  DG+  K    +LVLAATNRP  +D A+ R  RF+R I + +P ++
Sbjct: 641  NELEKRVVSQLLTLMDGL--KKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQ 698

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
             R  IL T   K K+D D+  +++A    GY G+DL  LC  AA
Sbjct: 699  GRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGADLAQLCFEAA 742

---

>VPS4A_MOUSE (Q8VEJ9) Vacuolar sorting protein 4a|
          Length = 437

 Score =  119 bits (299), Expect = 5e-27
 Identities = 71/162 (43%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMR 197
           ++F +VS S + SKW GE EK V+ LF LA +  P+IIF+DEVDS+ G R    E EA R
Sbjct: 187 STFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAAR 245

Query: 198 KIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESRELILR 377
           +IK EF+    G+   + +  LVL ATN P+ LD AI RRFE+RI + LP + +R  + R
Sbjct: 246 RIKTEFLVQMQGV-GNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFR 304

Query: 378 TVLSKEKVD-KDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             L     +  D    ELA  TEGYSG+D+  +   +  +PV
Sbjct: 305 LHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPV 346

---

>VPS4A_HUMAN (Q9UN37) Vacuolar sorting protein 4a (SKD2 protein) (hVPS4)|
           (VPS4-1)
          Length = 437

 Score =  119 bits (299), Expect = 5e-27
 Identities = 71/162 (43%), Positives = 97/162 (59%), Gaps = 1/162 (0%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMR 197
           ++F +VS S + SKW GE EK V+ LF LA +  P+IIF+DEVDS+ G R    E EA R
Sbjct: 187 STFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNE-NESEAAR 245

Query: 198 KIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESRELILR 377
           +IK EF+    G+   + +  LVL ATN P+ LD AI RRFE+RI + LP + +R  + R
Sbjct: 246 RIKTEFLVQMQGV-GNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARAQMFR 304

Query: 378 TVLSKEKVD-KDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             L     +  D    ELA  TEGYSG+D+  +   +  +PV
Sbjct: 305 LHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPV 346

---

>VAT_THEAC (O05209) VCP-like ATPase|
          Length = 745

 Score =  115 bits (289), Expect = 7e-26
 Identities = 63/169 (37%), Positives = 102/169 (60%), Gaps = 5/169 (2%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A ++ A+FI++    + SKW GE EK +R +F  A +VAP I+F+DE+DS+  +R    +
Sbjct: 522  ATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSD 581

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                 +I N+ ++  DGI   +G  ++V+ ATNRP  +D A++R  RF++ I +  P +E
Sbjct: 582  SGVTERIVNQLLTSLDGIEVMNG--VVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKE 639

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA---AYR 494
            +R  IL+       +  D++  ++A  TEGY G+DL+NLC  A   AYR
Sbjct: 640  ARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYR 688



 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 56/164 (34%), Positives = 99/164 (60%), Gaps = 7/164 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN++GA+F++++   I SK++G+ E+ +R +FS A + AP+IIF+DE+DS+  +R    +
Sbjct: 245 ANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV-Q 303

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R++  + ++  DG+  K    ++V+ ATNR   +D A+ R  RF+R I +G+P + 
Sbjct: 304 GEVERRVVAQLLTLMDGM--KERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRN 361

Query: 357 SRELIL-----RTVLSKEKVDKDIEYKELATMTEGYSGSDLKNL 473
            R+ IL        L   + +K+   +E+A  T G+ G+DL  L
Sbjct: 362 GRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAAL 405

---

>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score =  115 bits (288), Expect = 9e-26
 Identities = 60/160 (37%), Positives = 101/160 (63%), Gaps = 2/160 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN++ A+FI+V    + SKW GE EK+VR +F  A +VAP +IF DE+DS+  +R   G+
Sbjct: 510 ANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRGGIGD 569

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                ++ ++ ++  DG+  +  + ++V+AATNRP  +D A++R  R ER I +  P ++
Sbjct: 570 SHVTERVVSQLLTELDGL--EELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKK 627

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
           +R  I +  L  + +  D+  +ELA  TEGYSG+D++ +C
Sbjct: 628 ARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVC 667



 Score =  111 bits (278), Expect = 1e-24
 Identities = 63/164 (38%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+  A FI +S   I SK++GE E+ +R +F  A + AP+IIF+DE+DS+  +R     
Sbjct: 237 ANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEV-T 295

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R++  + ++  DG+ ++    ++V+AATNRP  +D A+ R  RF+R I +G+P +E
Sbjct: 296 GEVERRVVAQLLALMDGLEARGD--VIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKE 353

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R+ IL     K  + +D++ +ELA +T G+ G+DL+ LC  AA
Sbjct: 354 GRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAA 397

---

>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 392

 Score =  114 bits (284), Expect = 3e-25
 Identities = 68/168 (40%), Positives = 101/168 (60%), Gaps = 5/168 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA---R 173
           A ++ A+FI V  S    K+ GE  + VR +F LA + AP+I+F+DE+D++  +R     
Sbjct: 189 ATESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT 248

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            GE E  R +  + ++  DG   K  + + ++AATNR   LD A++R  RF+R I V LP
Sbjct: 249 SGEREIQRTLM-QLLAEIDGF--KPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLP 305

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAY 491
             E R+ I R  L K K D +I Y  LA+MTEG+SG+++KN+C  A Y
Sbjct: 306 NFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGY 353

---

>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156|
          Length = 903

 Score =  113 bits (283), Expect = 4e-25
 Identities = 63/164 (38%), Positives = 102/164 (62%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN++GA+FI+V    I SKW GE EK +R +F  A + AP IIF DE+D++  +R R   
Sbjct: 507 ANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLS 566

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                K+ N+ ++  DG+  +  + ++V+AATNRP  +D A++R  R +R I+V +P ++
Sbjct: 567 SAVTDKVVNQLLTELDGM--EEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEK 624

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           +R  I +       + +D+  +ELA  TEGY+G+D++ LC  AA
Sbjct: 625 ARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAA 668



 Score =  108 bits (270), Expect = 1e-23
 Identities = 63/166 (37%), Positives = 103/166 (62%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+AGA+F  ++   I SK+ GE E+N+R +F  A + AP+IIF+DE+D++  +R     
Sbjct: 234 ANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDE-AT 292

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R++  + ++  DG+  K   +++V+ ATNRP  LD A+ R  RF+R I++G+P +E
Sbjct: 293 GEVERRLVAQLLTLMDGL--KGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDRE 350

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYR 494
            R+ IL+       + +D++   LA +T G+ G+DL  LC  AA R
Sbjct: 351 GRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMR 396

---

>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score =  111 bits (278), Expect = 1e-24
 Identities = 61/158 (38%), Positives = 97/158 (61%), Gaps = 3/158 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR-ARCG 179
            AN+  A+FI+V    + S WFGE E NVR +F  A   AP ++F+DE+DS+   R A  G
Sbjct: 552  ANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASAG 611

Query: 180  EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
            +     ++ N+ ++  DG+ SK  + + V+ ATNRP  +D A++R  R ++ I V LP +
Sbjct: 612  DSGGGDRVVNQLLTEMDGVNSK--KNVFVIGATNRPDQIDPALMRPGRLDQLIYVPLPDE 669

Query: 354  ESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLK 467
            E+R  IL+T L    V +D++ + +A  T G+SG+DL+
Sbjct: 670  EARFSILQTQLRHTPVAEDVDLRAVAKATHGFSGADLE 707



 Score =  111 bits (277), Expect = 2e-24
 Identities = 64/168 (38%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K +P IIF+DE+DS+  +R +   
Sbjct: 279 ANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNG 338

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R++ ++ ++  DG+ ++S   ++V+AATNRP  +D A+ R  RF+R + VG+P   
Sbjct: 339 -EVERRVVSQLLTLMDGMKARSN--VVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  ILR      K+  D++ +++A  T GY GSDL +LC  AA + +
Sbjct: 396 GRLEILRIHTKNMKLADDVDLEQIAAETHGYVGSDLASLCSEAAMQQI 443

---

>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  111 bits (277), Expect = 2e-24
 Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A + AP ++F DE+DS+   +AR G 
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI--AKARGGN 588

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D AI+R  R ++ I + L
Sbjct: 589  IGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 646

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            P ++SR  IL+  L K  V KD++ + LA MT G+SG+DL  +C  A
Sbjct: 647  PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 693



 Score =  103 bits (257), Expect = 4e-22
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP IIF+DE+D++  +R +   
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-H 316

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  K    ++V+AATNRP  +D A+ R  RF+R + +G+P   
Sbjct: 317 GEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  IL+      K+  D++ +++A  T G+ G+DL  LC  AA + +
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

---

>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  111 bits (277), Expect = 2e-24
 Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A + AP ++F DE+DS+   +AR G 
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI--AKARGGN 588

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D AI+R  R ++ I + L
Sbjct: 589  IGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 646

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            P ++SR  IL+  L K  V KD++ + LA MT G+SG+DL  +C  A
Sbjct: 647  PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 693



 Score =  103 bits (257), Expect = 4e-22
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP IIF+DE+D++  +R +   
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-H 316

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  K    ++V+AATNRP  +D A+ R  RF+R + +G+P   
Sbjct: 317 GEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  IL+      K+  D++ +++A  T G+ G+DL  LC  AA + +
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

---

>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  111 bits (277), Expect = 2e-24
 Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A + AP ++F DE+DS+   +AR G 
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI--AKARGGN 588

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D AI+R  R ++ I + L
Sbjct: 589  IGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 646

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            P ++SR  IL+  L K  V KD++ + LA MT G+SG+DL  +C  A
Sbjct: 647  PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 693



 Score =  103 bits (257), Expect = 4e-22
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP IIF+DE+D++  +R +   
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-H 316

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  K    ++V+AATNRP  +D A+ R  RF+R + +G+P   
Sbjct: 317 GEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  IL+      K+  D++ +++A  T G+ G+DL  LC  AA + +
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

---

>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit) (Valosin-containing protein)
            (VCP)
          Length = 805

 Score =  111 bits (277), Expect = 2e-24
 Identities = 63/167 (37%), Positives = 101/167 (60%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A + AP ++F DE+DS+   +AR G 
Sbjct: 531  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI--AKARGGN 588

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D AI+R  R ++ I + L
Sbjct: 589  IGDGGGAADRVINQILTEMDGMSTK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 646

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            P ++SR  IL+  L K  V KD++ + LA MT G+SG+DL  +C  A
Sbjct: 647  PDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRA 693



 Score =  103 bits (257), Expect = 4e-22
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP IIF+DE+D++  +R +   
Sbjct: 258 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-H 316

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  K    ++V+AATNRP  +D A+ R  RF+R + +G+P   
Sbjct: 317 GEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 374

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  IL+      K+  D++ +++A  T G+ G+DL  LC  AA + +
Sbjct: 375 GRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAALQAI 422

---

>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
            (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score =  110 bits (276), Expect = 2e-24
 Identities = 58/162 (35%), Positives = 98/162 (60%), Gaps = 4/162 (2%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
            AN+  A+FI++    + + WFGE E NVR +F  A + AP ++F DE+DS+  QR     
Sbjct: 536  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSVG 595

Query: 177  GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + LP 
Sbjct: 596  DAGGAADRVLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653

Query: 351  QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
            +ESR  I ++ L K  V KD++ + LA  T+G+SG+D+  +C
Sbjct: 654  EESRYQIFKSCLRKSPVAKDVDLRALAKYTQGFSGADITEIC 695



 Score =  107 bits (267), Expect = 3e-23
 Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP+IIF+DE+DS+  +R +   
Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-H 321

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P + 
Sbjct: 322 GEVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 379

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  +LR      K+ +D++ + ++  T GY G+DL  LC  AA
Sbjct: 380 GRLEVLRIHTKNMKLAEDVDLERVSKDTHGYVGADLAALCTEAA 423

---

>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score =  110 bits (275), Expect = 3e-24
 Identities = 59/165 (35%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI+V    + + WFGE E NVR +F  A + AP ++F DE+DS+  QR     
Sbjct: 536  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSSG 595

Query: 183  HE--AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + LP 
Sbjct: 596  DAGGAADRVLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653

Query: 351  QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++SR  I +  L K  + KDI+ + LA  T+G+SG+D+  +C  A
Sbjct: 654  EDSRHQIFKACLRKSPLSKDIDLRALAKHTQGFSGADVTEICQRA 698



 Score =  103 bits (258), Expect = 3e-22
 Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP+IIF+DE+DS+  +R +   
Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-H 321

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P + 
Sbjct: 322 GEVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  +L       K+ ++++ + ++  T GY G+DL  LC  AA
Sbjct: 380 GRLEVLGIHTKNMKLAEEVDLERISKDTHGYVGADLAALCTEAA 423

---

>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase) (15S|
            Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score =  109 bits (272), Expect = 7e-24
 Identities = 63/167 (37%), Positives = 99/167 (59%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A + AP ++F DE+DS+   +AR G 
Sbjct: 532  ANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSI--AKARGGN 589

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+  K  + + ++ ATNRP  +D AI+R  R ++ I + L
Sbjct: 590  IGDGGGAADRVINQILTEMDGMSIK--KNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 647

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            P ++SR  IL+  L K  V KD++   LA MT G+SG+DL  +C  A
Sbjct: 648  PDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNGFSGADLTEICQRA 694



 Score =  104 bits (260), Expect = 2e-22
 Identities = 61/168 (36%), Positives = 97/168 (57%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP IIF+DE+D++  +R +   
Sbjct: 259 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-H 317

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  K    ++V+AATNRP  +D A+ R  RF+R + +G+P   
Sbjct: 318 GEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  IL+      K+  D++ +++A  T G+ G+DL  LC  AA + +
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLEQVANETHGHVGADLAALCSEAALQAI 423

---

>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score =  109 bits (272), Expect = 7e-24
 Identities = 64/164 (39%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP+IIF+DE+DS+  +R +   
Sbjct: 263 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-H 321

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P + 
Sbjct: 322 GEVERRIVSQLLTLMDGL--KSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPDEV 379

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  +LR      K+  D++ + +A  T GY G+DL  LC  AA
Sbjct: 380 GRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCTEAA 423



 Score =  108 bits (269), Expect = 1e-23
 Identities = 57/165 (34%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
            AN+  A+FI+V    + + WFGE E NVR +F  A + AP ++F DE+DS+  QR     
Sbjct: 536  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVG 595

Query: 177  GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + LP 
Sbjct: 596  DAGGAADRVLNQLLTEMDGMSAK--KTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPD 653

Query: 351  QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++SR  I +  L K  + K+++ + LA  T+G+SG+D+  +C  A
Sbjct: 654  EDSRHQIFKACLRKSPIAKNVDLRALARHTQGFSGADITEICQRA 698

---

>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
            (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score =  109 bits (272), Expect = 7e-24
 Identities = 59/165 (35%), Positives = 97/165 (58%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI+V    + + WFGE E NVR +F  A + AP ++F DE+DS+  QR     
Sbjct: 535  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSAG 594

Query: 183  HE--AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + LP 
Sbjct: 595  DAGGAADRVLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPD 652

Query: 351  QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++SR  I +  L K  V KD++   LA  T+G+SG+D+  +C  A
Sbjct: 653  EDSRLNIFKACLRKSPVAKDVDVTALAKYTQGFSGADITEICQRA 697



 Score =  107 bits (268), Expect = 2e-23
 Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP+IIF+DE+DS+  +R +   
Sbjct: 262 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-N 320

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P + 
Sbjct: 321 GEVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  +LR      K+ +D++ + ++  T GY G+DL  LC  AA
Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAA 422

---

>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score =  108 bits (270), Expect = 1e-23
 Identities = 61/168 (36%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   + SK  GE E N+R  F  A K AP IIF+DE+DS+  +R +   
Sbjct: 269 ANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDKTNG 328

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R++ ++ ++  DG+ ++S   ++V+AATNRP  +D A+ R  RF+R + +G+P   
Sbjct: 329 -EVERRVVSQLLTLMDGMKARSN--VVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  +LR      K+  D++ + LA  T GY G+D+ +LC  AA + +
Sbjct: 386 GRLEVLRIHTKNMKLADDVDLEALAAETHGYVGADIASLCSEAAMQQI 433



 Score =  101 bits (252), Expect = 1e-21
 Identities = 60/168 (35%), Positives = 97/168 (57%), Gaps = 6/168 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +  A+FI+V    + S W+GE E N+R +F  A   APT++F+DE+DS+   +AR G 
Sbjct: 542  ATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSI--AKARGGS 599

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+ +K  + + V+ ATNRP  +D AI+R  R ++ I V L
Sbjct: 600  LGDAGGASDRVVNQLLTEMDGMNAK--KNVFVIGATNRPDQIDPAILRPGRLDQLIYVPL 657

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            P + +R  IL   L K  ++  +E   +A  T+G+SG+DL  +   AA
Sbjct: 658  PDENARLSILNAQLRKTPLEPGLELTAIAKATQGFSGADLLYIVQRAA 705

---

>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score =  107 bits (268), Expect = 2e-23
 Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--- 173
           A +AG  F  +S S     + G     VR LF  A K AP I+F+DE+D++   RA    
Sbjct: 228 AGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAF 287

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G ++   +  N+ ++  DG  S +G  ++VLAATNRP  LD A++R  RF+R+++V  P
Sbjct: 288 MGGNDEREQTLNQLLTEMDGF-SAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRP 346

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
               R  IL     K K+DK++E K +AT T G++G+DL NL   AA
Sbjct: 347 DLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAA 393

---

>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score =  107 bits (268), Expect = 2e-23
 Identities = 58/166 (34%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI+V    + + WFGE E NVR +F  A + AP ++F DE+DS+  QR     
Sbjct: 535  ANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGSG 594

Query: 183  HE---AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             +   A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + LP
Sbjct: 595  GDGGGAADRVLNQLLTEMDGMNAK--KTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLP 652

Query: 348  TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             ++SR  I +  L K  + KD++   LA  T+G+SG+D+  +C  A
Sbjct: 653  DEDSRLNIFKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRA 698



 Score =  107 bits (268), Expect = 2e-23
 Identities = 63/164 (38%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F  A K AP+IIF+DE+DS+  +R +   
Sbjct: 262 ANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKREKT-N 320

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  KS   ++V+ ATNRP  +D A+ R  RF+R I +G+P + 
Sbjct: 321 GEVERRIVSQLLTLMDGL--KSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPDEI 378

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  +LR      K+ +D++ + ++  T GY G+DL  LC  AA
Sbjct: 379 GRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTEAA 422

---

>SAV_SULAC (Q07590) SAV protein|
          Length = 780

 Score =  107 bits (268), Expect = 2e-23
 Identities = 60/159 (37%), Positives = 96/159 (60%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A ++GA+FI V    I SKW GE EK +R +F  A + APT+IF DE+DS+   R    +
Sbjct: 542  ATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTD 601

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                 +I N+ ++  DGI+  +  +++++AATNRP  LD A++R  RF+R I V  P + 
Sbjct: 602  SGVTERIVNQLLAEMDGIVPLN--KVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKT 659

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNL 473
            +R  IL+       + +D+  +++A   EGY+G+DL+ L
Sbjct: 660  ARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEAL 698



 Score =  101 bits (251), Expect = 2e-21
 Identities = 61/164 (37%), Positives = 97/164 (59%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA FI V+   I SK++GE E+ +R +F  A + AP+IIF+DE+D++  +R     
Sbjct: 267 ANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDV-T 325

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  +++  + ++  DGI  K   R++V+ ATNRP  +D A+ R  RF+R I +  P  +
Sbjct: 326 GEVEKRVVAQLLTLMDGI--KGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R+ IL+       +  D++  +LA MT GY+G+DL  L   AA
Sbjct: 384 GRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGADLAALAKEAA 427

---

>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 393

 Score =  106 bits (265), Expect = 4e-23
 Identities = 65/171 (38%), Positives = 101/171 (59%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A ++ A FI+V  S    K+ GE  + VR LF +A + AP+IIF+DE+D++  +R     
Sbjct: 189 ATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT 248

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            GE E  R +  + ++  DG      + + ++AATNR   LD A++R  RF+R I V LP
Sbjct: 249 SGEREIQRTLM-QLLAELDGF--DPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLP 305

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             + R  I    L K K++ +I  + L+ +TEG+SG+D+KN+CV AAY  +
Sbjct: 306 DFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAI 356

---

>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score =  104 bits (260), Expect = 2e-22
 Identities = 64/166 (38%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP +IF+DE+D++  QR     
Sbjct: 205 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLG 264

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG     G  ++V+AATNRP  LD A+ R  RF+R+++VGLP 
Sbjct: 265 GGHDEREQTLNQMLVEMDGFSGNDG--VIVIAATNRPDVLDPALTRPGRFDRQVVVGLPD 322

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + RE IL+  + K  V +D++   LA  T GYSG+DL NL   AA
Sbjct: 323 VKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA 368

---

>PSMR_METMA (Q8PY58) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 420

 Score =  104 bits (259), Expect = 2e-22
 Identities = 63/165 (38%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+   A+FI V  S +  K+ G+  K VR +F +A K AP+IIF+DE+DS+  +R     
Sbjct: 214 AHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETT 273

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   + ++  DG   +  + I ++AATNRP  LD AI+R  RF+R + V +P 
Sbjct: 274 GADREVQRTLMQLLAEMDGFDKR--KNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPG 331

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            E+R  IL+    K  + +DI++K+LA  TEG SG+DLK +   A
Sbjct: 332 IEARGKILKIHCEKMTLAEDIDFKKLAKATEGMSGADLKAIATEA 376

---

>PSMR_ARCFU (O28303) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 398

 Score =  104 bits (259), Expect = 2e-22
 Identities = 66/166 (39%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           AN   A+FI V  S    K+ GE  + VR +F LA + AP+IIF+DE+D++  +R     
Sbjct: 196 ANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKEKAPSIIFIDELDAIAARRTNSDT 255

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + ++  DG   +    + V+ ATNR   LD AI+R  RF+R I V LP
Sbjct: 256 SGDREVQRTMM-QLLAELDGFDPRGD--VKVIGATNRIDILDPAILRPGRFDRIIEVPLP 312

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           T E R  I +    K K+ +D+++KELA +TEG SG+D+K +C  A
Sbjct: 313 TFEGRIQIFKIHTRKMKLAEDVDFKELARITEGASGADIKAICTEA 358

---

>PSMR_METAC (Q8TI88) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 421

 Score =  103 bits (258), Expect = 3e-22
 Identities = 63/165 (38%), Positives = 98/165 (59%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+   A+FI V  S +  K+ G+  K VR +F +A K AP+IIF+DE+DS+  +R     
Sbjct: 214 AHRTNATFIRVVGSELVQKYIGDGSKLVREIFEMARKKAPSIIFIDELDSIAARRLNETT 273

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   + ++  DG   +  + I ++AATNRP  LD AI+R  RF+R + V +P 
Sbjct: 274 GADREVQRTLMQLLAEMDGFDKR--KNIRIIAATNRPDVLDPAILRPGRFDRLVHVPMPG 331

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            E+R  IL+    K  +  DI++K+LA +TEG SG+DLK +   A
Sbjct: 332 IEARGKILKIHCGKMTLAGDIDFKKLAKVTEGMSGADLKAIATEA 376

---

>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
            (p97/CDC48 homolog 1)
          Length = 809

 Score =  102 bits (255), Expect = 6e-22
 Identities = 58/166 (34%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A   AP ++F DE+DS+   R     
Sbjct: 538  ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAG 597

Query: 183  HE---AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             +   A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + LP
Sbjct: 598  GDGGGASDRVINQVLTEMDGMNAK--KNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPLP 655

Query: 348  TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             + SR  IL+  L K  + KD++   LA  T G+SG+DL  +C  A
Sbjct: 656  DEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRA 701



 Score =  100 bits (248), Expect = 4e-21
 Identities = 57/168 (33%), Positives = 96/168 (57%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ G+ F  ++   + SK  GE E N+R  F    K  P I+F+DE+D++  +R +   
Sbjct: 265 ANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREKT-N 323

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  R+I ++ ++  DG+  +S   ++V+AATNRP  +D A+ R  RF+R I +G+P   
Sbjct: 324 GEVERRIVSQLLTLMDGVKGRS--NLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 381

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  ILR      K+  D++ +++A    G+ G+DL +LC  AA + +
Sbjct: 382 GRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQI 429

---

>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score =  102 bits (254), Expect = 8e-22
 Identities = 62/166 (37%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F ++S S     + G     VR LF  A K AP IIF+DE+D++  QR     
Sbjct: 220 AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLG 279

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG  +  G  I+++AATNR   LD A++R  RF+R+I V  P 
Sbjct: 280 GGHDEREQTLNQLLVEMDGFSANEG--IIIIAATNRADILDPALLRPGRFDRQIQVNRPD 337

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE +L+     + ++ D+  K +AT T G+SG+DL+NL   AA
Sbjct: 338 VNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLLNEAA 383

---

>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score =  102 bits (254), Expect = 8e-22
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F ++S S     + G     VR LF  A K AP+IIF+DE+D++  QR     
Sbjct: 247 AGEAGVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAVGRQRGAGLG 306

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ +   DG     G  ++V+AATNR   LD A++R  RF+R+++VG P 
Sbjct: 307 GGNDEREQTLNQLLVEMDGF-QDDGNSVIVIAATNRSDVLDPALLRPGRFDRKVLVGAPD 365

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + RE +L+     + +  D++   +AT T GY G+DL+N+   AA
Sbjct: 366 VKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGADLENVLNEAA 411

---

>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score =  102 bits (254), Expect = 8e-22
 Identities = 58/168 (34%), Positives = 99/168 (58%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+ GA F  ++   I SK  GE E N+R  F+   K +P I+F+DE+D++  +R +   
Sbjct: 264 ANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK-AH 322

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E  ++I ++ ++  DG+  K+   ++V+AATNRP  +D A+ R  RF+R I +G+P   
Sbjct: 323 GEVEKRIVSQLLTLMDGL--KTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            R  ILR      K+ +D++ +++A    G+ G+DL +LC  AA + +
Sbjct: 381 GRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQI 428



 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 58/167 (34%), Positives = 95/167 (56%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+  A+FI++    + + WFGE E NVR +F  A   AP ++F DE+DS+   +AR G 
Sbjct: 537  ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSI--AKARGGS 594

Query: 183  ----HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                  A  ++ N+ ++  DG+ +K  + + ++ ATNRP  +D A++R  R ++ I + L
Sbjct: 595  VGDAGGAADRVINQVLTEMDGMNAK--KNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL 652

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            P + SR  I +  L K  +  D++   LA  T G+SG+DL  +C  A
Sbjct: 653  PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRA 699

---

>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score =  102 bits (253), Expect = 1e-21
 Identities = 59/166 (35%), Positives = 99/166 (59%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +    FI++S  ++ S   GE EK +R LF  A  +AP ++F DE+D++  +R    +
Sbjct: 260 AGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGGAQ 319

Query: 183 HEAMRKIKNEFMSHWDGILSK--SGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
            E  R+I  + ++  D +  +  +G+ ++++ ATNRP  LD A+ R  RF+R I + +P 
Sbjct: 320 REMERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLNVPN 379

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + SR  IL+ +    K+D  I++ +LA +T G+ G+DLK L VTAA
Sbjct: 380 EVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFVGADLKAL-VTAA 424



 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 47/163 (28%), Positives = 93/163 (57%), Gaps = 6/163 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN++ A+FI++    + +K+ GE E+++R +F+ A    P +IF DE+D+++ +R     
Sbjct: 588  ANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRR-DTSL 646

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
             E+  ++ N  ++  DG+  + G  I V+ ATNRP  +D A++R  R ++ + + LP  E
Sbjct: 647  SESSSRVVNTLLTELDGLNDRRG--IFVIGATNRPDMIDPAMLRPGRLDKSLFIELPNTE 704

Query: 357  SRELILRTVLSKE--KVDKDIEYKELA--TMTEGYSGSDLKNL 473
             +  I++T+       +  D++++E+        +SG+DL  L
Sbjct: 705  EKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSGADLAAL 747

---

>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   +  E I+V+AATNRP  LD A++R  RF+R+++VGLP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  + +  +  DI+   +A  T G+SG+DL NL   AA
Sbjct: 324 VRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369

---

>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   +  E I+V+AATNRP  LD A++R  RF+R+++VGLP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  + +  +  DI+   +A  T G+SG+DL NL   AA
Sbjct: 324 VRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369

---

>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   +  E I+V+AATNRP  LD A++R  RF+R+++VGLP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  + +  +  DI+   +A  T G+SG+DL NL   AA
Sbjct: 324 VRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAA 369

---

>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   +  E I+V+AATNRP  LD A++R  RF+R+++VGLP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  + +  +  DI+   +A  T G+SG+DL NL   AA
Sbjct: 324 VRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369

---

>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score =  101 bits (252), Expect = 1e-21
 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   +  E I+V+AATNRP  LD A++R  RF+R+++VGLP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGF--EGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  + +  +  DI+   +A  T G+SG+DL NL   AA
Sbjct: 324 VRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAA 369

---

>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score =  101 bits (252), Expect = 1e-21
 Identities = 62/166 (37%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--- 173
           AN A A+FI ++   +  K+ GE  + VR LF LA + AP+IIF+DE+D++  +R R   
Sbjct: 234 ANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDAT 293

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + ++  DG      + I V+AATNR   LD A++R  RF+R I + LP
Sbjct: 294 SGDREVQRTL-TQLLAEMDGF--DPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLP 350

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            +E R  I +       + +D++ ++LA +TEG SG+D+K +C  A
Sbjct: 351 DEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEA 396

---

>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  100 bits (249), Expect = 3e-21
 Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA--RC 176
           A +AG  F ++S S     + G     VR+LF  A K AP IIF+DE+D++  QR     
Sbjct: 241 AGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLG 300

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ +   DG   +  E I+V+AATNR   LD A++R  RF+R+++VG P 
Sbjct: 301 GGNDEREQTLNQLLIEMDGF--EGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPD 358

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + RE IL+     + + +D++ K +A  T G+ G+DL+N+   AA
Sbjct: 359 VKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAA 404

---

>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score =  100 bits (249), Expect = 3e-21
 Identities = 60/166 (36%), Positives = 95/166 (57%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA--RC 176
           A +AG  F ++S S     + G     VR+LF  A K AP IIF+DE+D++  QR     
Sbjct: 241 AGEAGVPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLG 300

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ +   DG   +  E I+V+AATNR   LD A++R  RF+R+++VG P 
Sbjct: 301 GGNDEREQTLNQLLIEMDGF--EGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPD 358

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + RE IL+     + + +D++ K +A  T G+ G+DL+N+   AA
Sbjct: 359 VKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAA 404

---

>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 410

 Score =  100 bits (249), Expect = 3e-21
 Identities = 59/166 (35%), Positives = 100/166 (60%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--- 173
           A++  A+FI +  S    K+ GE  + VR +F LA + +P+IIF+DE+D++  +R +   
Sbjct: 206 AHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKRLKSST 265

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + ++  DG  S+    + ++AATNRP  LD A++R  RF+R I V LP
Sbjct: 266 SGDREVQRTLM-QLLAELDGFESRG--NVGIVAATNRPDILDPALLRPGRFDRFIEVPLP 322

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++ R  IL+   S   + ++++ + LA +T+G SG+DLK +C  A
Sbjct: 323 NEDGRREILKIHTSGMALAEEVDIELLARITDGASGADLKAICTEA 368

---

>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 99.8 bits (247), Expect = 5e-21
 Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A A F ++S S     + G     VR LF  A + AP I+F+DE+D++  QR     
Sbjct: 225 AGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQRGVGIG 284

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    +G  ++V+AATNR   LD A++R  RF+R+IMV LP 
Sbjct: 285 GGNDEREQTLNQLLTEMDGFSGDTG--VIVVAATNRIDVLDSALLRPGRFDRQIMVSLPN 342

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL+    K+K+ KD+  + +A  T G+SG+DL NL   AA
Sbjct: 343 INGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAA 388

---

>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F + + S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 304 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMG 363

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    SG  ++VLAATNRP  LD A++R  RF+R++ V  P 
Sbjct: 364 GGNDEREQTINQLLTEMDGFSGNSG--VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 421

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL+     + + KD++Y+++A  T G++G+DL+NL   AA
Sbjct: 422 VAGRVQILKVHSRGKAIGKDVDYEKVARRTPGFTGADLQNLMNEAA 467

---

>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 98.6 bits (244), Expect = 1e-20
 Identities = 60/166 (36%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F ++S S     + G     VR LF  A K AP +IF+DE+D++  QR     
Sbjct: 215 AGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEIDAVGRQRGAGLG 274

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG  +  G  I+++AATNR   LD A++R  RF+R+I V  P 
Sbjct: 275 GGHDEREQTLNQLLVEMDGFSANEG--IIIIAATNRADILDPALLRPGRFDRQITVDRPD 332

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE +L+     + +D+ +  K +A  T G+SG+DL+NL   AA
Sbjct: 333 VIGREAVLKVHARNKPLDETVNLKSIAMRTPGFSGADLENLLNEAA 378

---

>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  + K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG     G  I+++AATNRP  LD A++R  RF+R+++V LP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGFDGNEG--IILIAATNRPDVLDPALLRPGRFDRQVIVALPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  + K  + KD++   +A  T G+SG+DL NL   AA
Sbjct: 324 IRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAA 369

---

>CD48C_ARATH (Q9SS94) Cell division control protein 48 homolog C (AtCDC48c)|
          Length = 820

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 57/176 (32%), Positives = 99/176 (56%), Gaps = 10/176 (5%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+AG  F  +S + + S   G  E+N+R LFS A + AP+I+F+DE+D+ +G +    +
Sbjct: 288 ANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDA-IGSKRENQQ 346

Query: 183 HEAMRKIKNEFMSHWDGILSKSGER--------ILVLAATNRPFDLDEAIIR--RFERRI 332
            E  ++I  + ++  DG  +K  +         +LV+ ATNRP  LD A+ R  RFE  I
Sbjct: 347 REMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRSGRFETEI 406

Query: 333 MVGLPTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            +  P +++R  IL  V  K +++   + K +A +T G+ G+DL+++   A  + +
Sbjct: 407 ALTAPDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFVGADLESVAYLAGRKAI 462



 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN+AGA+F+++  + + +K+ GE E  +R LF  A   AP +IF DEVD++   R + G 
Sbjct: 583  ANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGKEGA 642

Query: 183  HEAMRKIKNEFMSHWDGILSKSGER--ILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
               + ++ N+F+   DG     GER  + V+ ATNRP  +D A +R  RF   + V LP 
Sbjct: 643  W-VVERLLNQFLVELDG-----GERRNVYVIGATNRPDVVDPAFLRPGRFGNLLYVPLPN 696

Query: 351  QESRELILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTAAYRPV 500
             + R  IL+ +  K+ +D  ++   +A    EG+SG+DL +L   A ++ V
Sbjct: 697  ADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQKATFQAV 747

---

>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 60/166 (36%), Positives = 99/166 (59%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A  + A+F+ ++   +   + G+  K VR  F+LA + +P IIF+DE+D++  +R    +
Sbjct: 240 AAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDAIGTKRFDSEK 299

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG    S +R+ V+AATNR   LD A++R  R +R++   LP
Sbjct: 300 AGDREVQRTML-ELLNQLDGF--SSDDRVKVIAATNRVDTLDPALLRSGRLDRKLEFPLP 356

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            +E+R  ILR    K  +D DI ++ELA  T+ Y+G+ LK++CV A
Sbjct: 357 NEEARVGILRIHSRKMAIDDDINWEELARSTDEYNGAMLKSVCVEA 402

---

>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score = 97.8 bits (242), Expect = 2e-20
 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F + + S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 307 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMG 366

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    SG  ++VLAATNRP  LD A++R  RF+R++ V  P 
Sbjct: 367 GGNDEREQTINQLLTEMDGFSGNSG--VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 424

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL+     + + KD++++++A  T GY+G+DL+NL   AA
Sbjct: 425 VAGRIKILQVHSRGKALTKDVDFEKIARRTPGYTGADLQNLMNEAA 470

---

>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 97.4 bits (241), Expect = 3e-20
 Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA--RC 176
           A +AG  F ++S S     + G     VR LF  A + AP ++F+DE+D++  QR     
Sbjct: 265 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFIDEIDAVGRQRGVGYG 324

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    SG  I+V+AATNRP  LD A++R  RF+R++ V  P 
Sbjct: 325 GGNDEREQTLNQLLTEMDGFEGNSG--IIVIAATNRPDVLDLALLRPGRFDRQVTVDYPD 382

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + RELIL      +K+ ++++   +A  T G++G+DL N+   AA
Sbjct: 383 VQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTGADLANVLNEAA 428

---

>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 62/167 (37%), Positives = 92/167 (55%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   FI+VS S     + G     VR LF  A K AP IIF+DE+D++   R     
Sbjct: 209 AGEAHVPFISVSGSDFVEMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPV 268

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G H+   +  N+ +   DG  +  G  I+V+AATNRP  LD A++R  RF+R+I +  P
Sbjct: 269 GGGHDEREQTLNQLLVEMDGFDTSDG--IIVIAATNRPDILDPALLRPGRFDRQIFIPKP 326

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
               R  IL+     +K+ KD++ + +A  T G++G+DL+NL   AA
Sbjct: 327 DVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAA 373

---

>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S+    + G   K VR +F  A K+AP IIF+DE+D++   R     
Sbjct: 266 AGEANVPFFFISASSFVELYVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSRGSGIG 325

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ +   DGI   +G  IL++ ATNR   LD A++R  RF+R I VGLP 
Sbjct: 326 GGNDEREQTLNQILVEMDGINENAG--ILIMGATNRTDVLDPALLRPGRFDRIITVGLPD 383

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNL 473
            + RE IL+     +++ K+I++ ++A  T GYSG+ L+N+
Sbjct: 384 IKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENV 424

---

>PSMR_METJA (Q58576) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 430

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +  A+FI V  S +  K+ GE    V+ +F LA + AP+IIF+DE+D++  +R     
Sbjct: 225 ATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALT 284

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + ++  DG  ++    + ++ ATNRP  LD AI+R  RF+R I V  P
Sbjct: 285 GGDREVQRTLM-QLLAEMDGFDARGD--VKIIGATNRPDILDPAILRPGRFDRIIEVPAP 341

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            ++ R  IL+    K  + +D+  +E+A MTEG  G++LK +C  A    +
Sbjct: 342 DEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAI 392

---

>PSMR_AERPE (Q9YAC7) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 409

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 61/171 (35%), Positives = 99/171 (57%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A +  A+FI V  S + +K+ GE  + VR +F LA + AP+I+F+DE+D++  +R     
Sbjct: 194 AGETEATFIRVVGSELVNKFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT 253

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + ++  DG      + + V+AATNR   +D A++R  RF+R I V LP
Sbjct: 254 SGDREVQRTML-QLLAELDGF--DPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLP 310

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
           +   R  IL     K K+  D++ + +A +TEG+SG+DLK + V A Y  +
Sbjct: 311 SLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAI 361

---

>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 638

 Score = 96.7 bits (239), Expect = 4e-20
 Identities = 58/167 (34%), Positives = 97/167 (58%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A +A   F ++  S+    + G     VR LF +A K AP+IIF+DE+D++   RA  G 
Sbjct: 230 AGEASVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIGKSRAAGGM 289

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
              ++   +  N+ ++  DG  S++   ++VLAATNRP  LD A++R  RF+R+++V  P
Sbjct: 290 ISGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALLRPGRFDRQVLVDKP 348

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
             + R  IL+  +   K+  D++ +E+A +T G +G+DL N+   AA
Sbjct: 349 DFKGRVEILKVHIKPVKLANDVDLQEIAKLTAGLAGADLANIINEAA 395

---

>PSMR_PYRHO (O57940) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 65/166 (39%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A++  A+FI V  S +  K+ GE  + V  LF LA + APTIIF+DE+D++  +R     
Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            GE E  R +  + ++  DG   +    + V+AATNRP  LD A++R  RF+R I V LP
Sbjct: 255 GGEREVNRTLM-QLLAEMDGFDPRG--NVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 311

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  IL+    + K+ K ++ + +A MTEG SG+DLK +   A
Sbjct: 312 DFEGRLEILKVHTRRMKL-KGVDLRAIAEMTEGASGADLKAIATEA 356

---

>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 59/166 (35%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  A K AP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG     G  ++++AATNRP  LD A++R  RF+R+++V LP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGFDGNEG--VILIAATNRPDVLDPALLRPGRFDRQVIVALPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R+ IL+  + K  + +D++   +A  T G+SG+DL NL   AA
Sbjct: 324 VRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAA 369

---

>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F ++S S     + G     VR LF  A + AP +IF+DE+D++  QR     
Sbjct: 226 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIG 285

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    +G  I+++AATNRP  LD A++R  RF+R++MV  P 
Sbjct: 286 GGNDEREQTLNQLLTEMDGFEGNTG--IIIIAATNRPDVLDSALMRPGRFDRQVMVDAPD 343

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R+ IL      +K+  ++    +A  T G+SG+DL NL   AA
Sbjct: 344 YSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAA 389

---

>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F   + S       G   K VR LF+ A K AP IIF+DE+DS+  +R R   
Sbjct: 285 AGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVEL 344

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
             +  + +  N+ ++  DG  S++G  ++V+AATNR   LD+A++R  RF+R I + LP 
Sbjct: 345 SSYSVVEQTLNQLLAEMDGFTSRTG--VVVMAATNRLDVLDDALLRPGRFDRHIQINLPD 402

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNL 473
            + RE IL+     + +   I   ++A  T G+SG+ L+N+
Sbjct: 403 IKEREGILKVHAENKNLSSKISLLDVAKRTPGFSGAQLENV 443

---

>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 59/165 (35%), Positives = 94/165 (56%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +     + V+   I S   GE E+ +R LF  A   AP IIF+DE+D++  +R     
Sbjct: 319 AGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR-EVAS 377

Query: 183 HEAMRKIKNEFMSHWDGILSKSGE-RILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
            +  R+I  + ++  D + + +   R+LV+ ATNRP  LD A+ R  RF+R I +G+P +
Sbjct: 378 KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDE 437

Query: 354 ESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            SRE IL+T+  K ++ +  ++  LA +T G+ G+DL  LC  AA
Sbjct: 438 ASRERILQTLCRKLRLPQAFDFCHLAHLTPGFVGADLMALCREAA 482



 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 55/164 (33%), Positives = 97/164 (59%), Gaps = 7/164 (4%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN++G +FI+V    + + + GE E+ VR +F  A   AP +IF DEVD++  +R+   E
Sbjct: 636  ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD-RE 694

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
              A  ++ N+ ++  DG+  ++ +++ ++AATNRP  +D AI+R  R ++ + VGLP   
Sbjct: 695  TGASVRVVNQLLTEMDGL--EARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 752

Query: 357  SRELILRTVL---SKEKVDKDIEYKELA--TMTEGYSGSDLKNL 473
             R  IL+T+    +K  +D D+  + +A     + Y+G+DL  L
Sbjct: 753  DRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSAL 796

---

>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 8/170 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +A   FI VS S     + G     VR LF+LA K AP I+F+DE+D++  +R R   
Sbjct: 362 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 421

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G         N+ +   DG    +   +++LA TNRP  LD A++R  RF+R+I +G P 
Sbjct: 422 GGQSEQENTLNQLLVEMDGF--NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD 479

Query: 351 QESRELILRTVLSKEKVDKDIE----YKELATMTEGYSGSDLKNLCVTAA 488
            + R  I +  L   K+D  +E     ++LA++T G+SG+D+ N+C  AA
Sbjct: 480 IKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAA 529

---

>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 95.9 bits (237), Expect = 8e-20
 Identities = 62/166 (37%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A    A+F+ ++   +   + GE  K VR  F+LA + APTIIF+DE+D++  +R    +
Sbjct: 236 AAQTNATFLKLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEK 295

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG    S +R+ VLAATNR   LD A++R  R +R+I   LP
Sbjct: 296 SGDREVQRTML-ELLNQLDGF--SSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLP 352

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +++SR  IL+    K   D DI ++ELA  T+ ++G+ LK + V A
Sbjct: 353 SEDSRAQILQIHSRKMTTDDDINWQELARSTDEFNGAQLKAVTVEA 398

---

>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 58/164 (35%), Positives = 91/164 (55%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           + +A   F+  S S+      G     +R LF+ A + +P ++F+DE+DS+ G R     
Sbjct: 220 SGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSPH 279

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
           H    +  N+ ++  DG  SK G  I+VL ATN+   LD+A++R  RF+ +I V  PT E
Sbjct: 280 HPFANQTINQLLAEMDGFQSKEG--IIVLGATNQAEVLDKALLRPGRFDVQIHVSPPTYE 337

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  +L   L K K   +I+ ++LA  T GY+G+D++NL   AA
Sbjct: 338 GRIALLNLYLKKVKTGSNIDIEKLAHGTVGYTGADIQNLVNQAA 381

---

>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 60/166 (36%), Positives = 90/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F  +S S     + G     VR +F  + KVAP IIF+DE+D++  QR     
Sbjct: 206 AGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGAGLG 265

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG     G  I+++AATNRP  LD A++R  RF+R+I V LP 
Sbjct: 266 GGHDEREQTLNQMLVEMDGFDGNEG--IILIAATNRPDVLDPALLRPGRFDRQIFVALPD 323

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE I++  + K  +  +++   +A  T G+SG+DL NL   AA
Sbjct: 324 IRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAA 369

---

>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 8/170 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +A   FI VS S     + G     VR LF+LA K AP I+F+DE+D++  +R R   
Sbjct: 361 AGEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNF 420

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G         N+ +   DG    +   +++LA TNRP  LD A++R  RF+R+I +G P 
Sbjct: 421 GGQSEQENTLNQLLVEMDGF--NTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPD 478

Query: 351 QESRELILRTVLSKEKVD----KDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + R  I +  L   K+D    KD   ++LA++T G+SG+D+ N+C  AA
Sbjct: 479 IKGRASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAA 528

---

>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F   + S       G   K VR LF+ A K AP IIF+DE+DS+  +R R   
Sbjct: 282 AGEAGVPFFQSTGSGFEDMLVGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVEL 341

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
             +  + +  N+ ++  DG  S++G  ++V+AATNR   LD+A++R  RF+R I + LP 
Sbjct: 342 SSYSVVEQTLNQLLAEMDGFTSRTG--VVVMAATNRLDVLDDALLRPGRFDRHIQINLPD 399

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNL 473
            + RE IL+     + +   I   ++A  T G+SG+ L+N+
Sbjct: 400 IKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENV 440

---

>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 58/166 (34%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F + + S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 316 AGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMG 375

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    SG  ++VLAATNRP  LD A++R  RF+R++ V  P 
Sbjct: 376 GGNDEREQTINQLLTEMDGFSGNSG--VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 433

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL+     + + KD+++ ++A  T G++G+DL+NL   AA
Sbjct: 434 VAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMNEAA 479

---

>PSMR_PYRAB (Q9V287) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 399

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 64/166 (38%), Positives = 97/166 (58%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A++  A+FI V  S +  K+ GE  + V  LF LA + APTIIF+DE+D++  +R     
Sbjct: 195 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 254

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            GE E  R +  + ++  DG   +    + V+AATNRP  LD A++R  RF+R I V LP
Sbjct: 255 GGEREVNRTLM-QLLAEMDGFDPRG--NVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 311

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  IL+    + K+ K+++ + +A +TEG SG+DLK +   A
Sbjct: 312 DFEGRLEILKVHTRRMKL-KNVDLRVIAEITEGASGADLKAIATEA 356

---

>PRS10_CAEEL (O17071) Probable 26S protease regulatory subunit S10B (Proteasome|
           regulatory particle ATPase-like protein 4)
          Length = 406

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 56/166 (33%), Positives = 98/166 (59%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A+    +F+ V  S I  K+ GE  + +R +F+ A    P I+F+DE+D++ G+R   G 
Sbjct: 205 ASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGT 264

Query: 183 HEAMRKIKN---EFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             A R+I+    E ++  DG  S    ++ V+ ATNRP  LD A++R  R +R+I +GLP
Sbjct: 265 -SADREIQRTLMELLNQLDGFDSLG--KVKVIMATNRPDTLDPALLRPGRLDRKIEIGLP 321

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++SR  IL+   +K     +I+++ +  +++G+S +DL+N+C  A
Sbjct: 322 NEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEA 367

---

>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +  ASF+ V  S +  K+ GE  K VR +F LA + +P IIF+DE+D++  +R     
Sbjct: 203 AYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKRTESLT 262

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + ++  DG  S+    + ++AATNRP  LD AI+R  RF+R I + +P
Sbjct: 263 GGDREVQRTLM-QLLAEMDGFDSRGD--VKIIAATNRPDILDPAILRPGRFDRIIEISMP 319

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++ R  IL+    K  + K ++ +E+A + E   G+DLK +C  A
Sbjct: 320 DEDGRLEILKIHTEKMNL-KGVDLREVAKIAENMVGADLKAVCTEA 364

---

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F + + S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 307 AGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGLG 366

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    SG  ++VLAATNRP  LD A++R  RF+R++ V  P 
Sbjct: 367 GGNDEREQTINQLLTEMDGFSGNSG--VIVLAATNRPDVLDSALLRPGRFDRQVTVDRPD 424

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL+     + + KD+++ ++A  T G++G DL+NL   AA
Sbjct: 425 VAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAA 470

---

>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +A   FI V+ S     + G     VR +F++A K AP I+F+DE+D++  +R R   
Sbjct: 228 AGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHL 287

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G         N+ +   DG    S   ++VLA TNRP  LD A+ R  RF+R+I +G P 
Sbjct: 288 GGQSEQENTLNQMLVEMDGF--NSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGPPD 345

Query: 351 QESRELILRTVLSKEKVD----KDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + R  I +  L   K+D    KD   ++LA +T G++G+D+ N+C  AA
Sbjct: 346 IKGRSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAA 395

---

>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score = 94.0 bits (232), Expect = 3e-19
 Identities = 57/166 (34%), Positives = 92/166 (55%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +AG  F + + S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 284 AGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEIDAVGRQRGAGLG 343

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    SG  ++VLAATNRP  LD A++R  +F+R++ V  P 
Sbjct: 344 GGNDEREQTINQLLTEMDGFSGNSG--VIVLAATNRPDVLDSALLRPGKFDRQVTVDRPD 401

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL+     + + KD+++ ++A  T G++G+DL+NL   AA
Sbjct: 402 VAGRVRILQVHSRGKALAKDVDFDKIARRTPGFTGADLQNLMNEAA 447

---

>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 855

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +     + V+   I S   GE E+ +R LF  A   AP I+F+DE+D++  +R     
Sbjct: 318 AGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKR-EVAS 376

Query: 183 HEAMRKIKNEFMSHWDGILSKSGE-RILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
            +  R+I  + ++  D + + +   R+LV+ ATNRP  LD A+ R  RF+R + +G+P +
Sbjct: 377 KDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDE 436

Query: 354 ESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            +RE IL+T+  K ++ +   +  LA +T G+ G+DL  LC  AA
Sbjct: 437 AARERILQTLCRKLRLPETFNFCHLAHLTPGFVGADLMALCREAA 481



 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 56/164 (34%), Positives = 97/164 (59%), Gaps = 7/164 (4%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            AN++G +FI+V    + + + GE E+ VR +F  A   AP +IF DEVD++  +R+   E
Sbjct: 635  ANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSD-RE 693

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
              A  ++ N+ ++  DG+  ++ +++ +LAATNRP  +D AI+R  R ++ + VGLP   
Sbjct: 694  TGASVRVVNQLLTEMDGL--ETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPA 751

Query: 357  SRELILRTVL---SKEKVDKDIEYKELAT--MTEGYSGSDLKNL 473
             R  IL+T+    +K  +D+D+  + +A       Y+G+DL  L
Sbjct: 752  DRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTAL 795

---

>PSMR_PYRKO (Q5JHS5) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 397

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 64/166 (38%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A+FI V  S +  K+ GE  + V  LF LA + APTIIF+DE+D++  +R     
Sbjct: 193 ANHVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETT 252

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            GE E  R +  + ++  DG   +    + V+AATNRP  LD A++R  RF+R I V LP
Sbjct: 253 GGEREVNRTLM-QLLAEMDGFDPRG--NVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 309

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             + R  IL+    K  + K ++ + +A +TEG SG+DLK +   A
Sbjct: 310 DYQGRLEILKVHTRKMNL-KGVDLRVIAEITEGASGADLKAIATEA 354

---

>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +A   F   S S     + G     +R LF  A   AP +IF+DE+DS+ G+R     
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
           H   R+  N+ ++  DG   K  E ++++ ATN P  LD A+IR  RF+ ++ V  P  +
Sbjct: 395 HPYSRQTINQLLAEMDGF--KPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVK 452

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYR 494
            R  IL+  L+K K DK ++ + +A  T G+SG++L+NL   AA +
Sbjct: 453 GRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALK 498

---

>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F ++S S     + G     VR LF  A + AP ++F+DE+D++  QR     
Sbjct: 208 AGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAGIG 267

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    +G  ++V+AATNR   LD A++R  RF+R+IMV +P 
Sbjct: 268 GGNDEREQTLNQLLTEMDGFEGNTG--VIVIAATNRVDVLDAALLRPGRFDRQIMVSMPD 325

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            +SR  IL+   +++K+   +  + +A  T G++G+DL NL   AA
Sbjct: 326 VKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAA 371

---

>PSMR_PYRFU (Q8U4H3) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 396

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 63/166 (37%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           A++  A+FI V  S +  K+ GE  + V  LF LA + APTIIF+DE+D++  +R     
Sbjct: 192 AHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRLDETT 251

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            GE E  R +  + ++  DG   +    + V+AATNRP  LD A++R  RF+R I V LP
Sbjct: 252 GGEREVNRTLM-QLLAEMDGFDPRG--NVKVIAATNRPDILDPALLRPGRFDRLIEVPLP 308

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  IL+    + K+ + ++ + +A +TEG SG+DLK +   A
Sbjct: 309 DFEGRLEILKVHTRRMKL-RGVDLRLIAELTEGASGADLKAIATEA 353

---

>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F ++S S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 215 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAVGRQRGAGLG 274

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    +G  I+++AATNRP  LD A++R  RF+R+++V  P 
Sbjct: 275 GGNDEREQTLNQLLTEMDGFEGNTG--IIIVAATNRPDVLDSALMRPGRFDRQVVVDRPD 332

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL      + + +D++  ++A  T G++G+DL NL   AA
Sbjct: 333 YAGRREILNVHARGKTLSQDVDLDKIARRTPGFTGADLSNLLNEAA 378

---

>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 61/166 (36%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A    A+F+ ++   +   + G+  K VR  F LA + AP IIF+DE+D++  +R     
Sbjct: 226 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAIGTKRFDSEV 285

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG    S ERI V+AATNR   LD A++R  R +R+I    P
Sbjct: 286 SGDREVQRTML-ELLNQLDGF--SSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 342

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           T+E+R  IL+    K  V  D+ ++ELA  T+ ++G+ LK +CV A
Sbjct: 343 TEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEA 388

---

>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 61/166 (36%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A+FI V  S +  K+ GE  + VR LF +A      IIF DE+D++ G R     
Sbjct: 234 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAIGGARFDDGA 293

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I VL ATNRP  LDEA++R  R +R++  GLP
Sbjct: 294 GGDNEVQRTML-ELITQLDGFDPRG--NIKVLFATNRPNTLDEALMRPGRIDRKVEFGLP 350

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  ILR       +DKDI ++ +A +    +G++L+++C  A
Sbjct: 351 DLEGRAHILRIHAKSMAIDKDIRWELIARLCPSQTGAELRSVCTEA 396

---

>AFG2_YEAST (P32794) Protein AFG2|
          Length = 780

 Score = 92.8 bits (229), Expect = 6e-19
 Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 6/164 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN + A  + ++  +I SK+ GE E  +R +F+ A K  P+IIF+DE+DS+   RA    
Sbjct: 300 ANTSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDDS 359

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
            E   ++    ++  DG+   +  +++V+AATNRP  +D A+ R  RF++ + +G+P  +
Sbjct: 360 GEVESRVVATLLTLMDGM--GAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIPDVD 417

Query: 357 SRELILRTVLSKEKVDKDI----EYKELATMTEGYSGSDLKNLC 476
           +R  IL    S+   D+ +      K +A+ T GY G+DL  LC
Sbjct: 418 ARFDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALC 461



 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 56/164 (34%), Positives = 91/164 (55%), Gaps = 3/164 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A ++G +F+ V    I +K+ GE E+ +R +F  A   AP+IIF DE+D++   R     
Sbjct: 571  ATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRDG-SS 629

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
              A   +    ++  DG+    G  ++++AATNRP ++D A++R  R +R I VG P   
Sbjct: 630  TSAANHVLTSLLNEIDGVEELKG--VVIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVN 687

Query: 357  SRELILRTVLSKEKVDKD-IEYKELATMTEGYSGSDLKNLCVTA 485
            +R  IL+    K   ++  ++  ELA  TEGYSG+++  LC  A
Sbjct: 688  ARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQEA 731

---

>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A +A   F ++  S+    + G     VR LF  A K AP+IIF+DE+D++   RA  G 
Sbjct: 224 AGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGV 283

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
              ++   +  N+ ++  DG  S++   ++VLAATNRP  LD A++R  RF+R+++V  P
Sbjct: 284 VSGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALMRPGRFDRQVLVDKP 342

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
               R  IL+  +   K+  D+  +E+A +T G +G+DL N+   AA
Sbjct: 343 DFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAA 389

---

>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 632

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 5/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A +A   F ++  S+    + G     VR LF  A K AP+IIF+DE+D++   RA  G 
Sbjct: 224 AGEAHVPFFSMGGSSFIEMFVGLGASRVRDLFETAKKQAPSIIFIDEIDAIGKSRAAGGM 283

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
              ++   +  N+ ++  DG  S++   ++VLAATNRP  LD A++R  RF+R+++V  P
Sbjct: 284 ISGNDEREQTLNQLLAEMDGFGSENAP-VIVLAATNRPEILDPALMRPGRFDRQVLVDKP 342

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
               R  IL+  +   K+  D+  +E+A +T G +G+DL N+   AA
Sbjct: 343 DFNGRVEILKVHIKGVKLANDVNLQEVAKLTAGLAGADLANIINEAA 389

---

>PEX1_YEAST (P24004) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1043

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/177 (32%), Positives = 97/177 (54%), Gaps = 11/177 (6%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A   G +FI+V    I +K+ G  E+N+R LF  A  V P I+F DE DS+  +R     
Sbjct: 752  AQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGH-DS 810

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                 ++ N+ ++  DG     G  + +LAAT+RP  +D A++R  R ++ ++  +PT+ 
Sbjct: 811  TGVTDRVVNQLLTQMDGAEGLDG--VYILAATSRPDLIDSALLRPGRLDKSVICNIPTES 868

Query: 357  SRELILRTVL-SKEK--------VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             R  IL+ ++ SK+K        ++K+ + K +A  T G+SG+DL+ LC  A  + V
Sbjct: 869  ERLDILQAIVNSKDKDTGQKKFALEKNADLKLIAEKTAGFSGADLQGLCYNAYLKSV 925

---

>PEX6_CANGA (Q6FW67) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1017

 Score = 92.4 bits (228), Expect = 8e-19
 Identities = 58/166 (34%), Positives = 93/166 (56%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P +IF DEVDS+  +R   G+
Sbjct: 772  ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVAPKRGNQGD 831

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-PT 350
                M +I ++ ++  DG +S  G+ + ++ ATNRP  LDEA++R  RF++ I +G+  T
Sbjct: 832  SGGVMDRIVSQLLAELDG-MSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLIYLGIADT 890

Query: 351  QESRELILRTVLSKEKVDKDIEYKELAT-MTEGYSGSDLKNLCVTA 485
            +E +  I+R +  K KV  DI + EL +     Y+G+D   LC  A
Sbjct: 891  REKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDA 936

---

>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 57/166 (34%), Positives = 90/166 (54%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +A   F   S S     + G     +R LF  A   AP +IF+DE+DS+ G+R     
Sbjct: 393 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 452

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
           H   R+  N+ ++  DG   K  E ++++ ATN P  LD A+IR  RF+ ++ V  P  +
Sbjct: 453 HPYSRQTINQLLAEMDGF--KPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVK 510

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYR 494
            R  IL+  L+K K D+ ++ + +A  T G+SG++L+NL   AA +
Sbjct: 511 GRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALK 556

---

>PRS6B_CAEEL (P46502) Probable 26S protease regulatory subunit 6B|
          Length = 414

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A +  ASFI V  S    K+ GE  + VR +F LA + +P+IIF+DE+D++  +R  A+ 
Sbjct: 216 AANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQT 275

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 276 GADREVQRILLELLNQMDGF--DQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPD 333

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
           +  + L+  TV S+  +  D++ ++     +  SG+D+ ++C  A  + V
Sbjct: 334 RRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAV 383

---

>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F ++S S     + G     VR LF  A   AP I+F+DE+D++  QR     
Sbjct: 227 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQRGTGVG 286

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    +G  ++V+AATNR   LD A++R  RF+R++ V +P 
Sbjct: 287 GGNDEREQTLNQLLTEMDGFEGNTG--VIVIAATNRADILDSALLRPGRFDRQVSVDVPD 344

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  IL      +K++  +  + +A  T G+SG+DL NL   AA
Sbjct: 345 FRGRLAILEVHAKNKKMESKVSLETIARRTPGFSGADLANLLNEAA 390

---

>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 58/165 (35%), Positives = 90/165 (54%), Gaps = 3/165 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-G 179
           A +A   F  +S S     + G     VR LF  A + AP IIF+DE+D++   R     
Sbjct: 195 AGEASVPFFRISGSDFIEMFVGIGASRVRDLFKQAREKAPGIIFIDELDAIGKSRLNAIH 254

Query: 180 EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
            ++   +  N+ +   DG  + +G  +++LAATNRP  LD A++R  RF+R++ V  P  
Sbjct: 255 SNDEREQTLNQLLVEMDGFDNTTG--LILLAATNRPDVLDPALLRPGRFDRQVCVDRPDL 312

Query: 354 ESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           + RE ILR      K+  +++ K +A +T GYSG+DL N+   AA
Sbjct: 313 KGREAILRIHAQNVKLAPEVDLKAVARITGGYSGADLANVVNEAA 357

---

>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A    A+F+ ++   +   + G+  K VR  F LA + +P IIF+DE+D++  +R     
Sbjct: 225 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 284

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG    S +RI V+AATNR   LD A++R  R +R+I    P
Sbjct: 285 SGDREVQRTML-ELLNQLDGF--SSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 341

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           T+E+R  IL+    K  V+ D+ ++ELA  T+ ++G+ LK +CV A
Sbjct: 342 TEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEA 387

---

>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 91.3 bits (225), Expect = 2e-18
 Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 5/168 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A   G +F+ V  S I  K+ GE  + +R +F  A +  P +IF+DE+D++ G+R   G 
Sbjct: 187 AASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGT 246

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             + E  R +  E ++  DG       +I++  ATNRP  LD A++R  R +R+I + LP
Sbjct: 247 SADREIQRTLM-ELLNQMDGFDYLGQTKIIM--ATNRPDTLDPALLRPGRLDRKIEIPLP 303

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAY 491
            +  R  IL+  L K     +I+Y+ L  +T+G +G+DL+N+   A +
Sbjct: 304 NEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGF 351

---

>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 53/166 (31%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A+    +F+ V  S+I  K+ GE  + +R +F+ A    P IIF+DE+D++ G+R   G 
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             + E  R +  E ++  DG    +  R+ ++ ATNRP  LD A++R  R +R+I + LP
Sbjct: 248 SADREIQRTLM-ELLNQMDGF--DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            +++R  IL+          +I+Y+ +  +++G++G+DL+N+C  A
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350

---

>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 53/166 (31%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A+    +F+ V  S+I  K+ GE  + +R +F+ A    P IIF+DE+D++ G+R   G 
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             + E  R +  E ++  DG    +  R+ ++ ATNRP  LD A++R  R +R+I + LP
Sbjct: 248 SADREIQRTLM-ELLNQMDGF--DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            +++R  IL+          +I+Y+ +  +++G++G+DL+N+C  A
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350

---

>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 53/166 (31%), Positives = 96/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG- 179
           A+    +F+ V  S+I  K+ GE  + +R +F+ A    P IIF+DE+D++ G+R   G 
Sbjct: 188 ASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGT 247

Query: 180 --EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
             + E  R +  E ++  DG    +  R+ ++ ATNRP  LD A++R  R +R+I + LP
Sbjct: 248 SADREIQRTLM-ELLNQMDGF--DTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLP 304

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            +++R  IL+          +I+Y+ +  +++G++G+DL+N+C  A
Sbjct: 305 NEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEA 350

---

>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A    A+F+ ++   +   + G+  K VR  F LA + +P IIF+DE+D++  +R     
Sbjct: 231 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKSPCIIFIDEIDAIGTKRFDSEV 290

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG    S ERI V+AATNR   LD A++R  R +R+I    P
Sbjct: 291 SGDREVQRTML-ELLNQLDGF--SSDERIKVIAATNRADILDPALMRSGRLDRKIEFPHP 347

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           ++E+R  IL+    K  V+ D+ ++ELA  T+ ++G+ LK +CV A
Sbjct: 348 SEEARARILQIHSRKMNVNPDVNFEELARSTDDFNGAQLKAVCVEA 393

---

>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F ++S S     + G     VR LF  A + +P I+F+DE+D++  QR     
Sbjct: 227 AGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQRGTGIG 286

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG    +G  I+++AATNR   LD A++R  RF+R++ V +P 
Sbjct: 287 GGNDEREQTLNQLLTEMDGFEGNTG--IIIIAATNRVDVLDAALLRPGRFDRQVTVDVPD 344

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + R  IL      +K+D  I  + +A  T G+SG+DL NL   AA
Sbjct: 345 VKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAA 390

---

>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           AN+A   F +V+ S     + G     VR LF  A++ AP I+F+DE+D++  +R     
Sbjct: 240 ANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVG 299

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ ++  DG     G  ++V+ ATNR   LD A++R  RF+R++ V LP 
Sbjct: 300 GGNDEREQTLNQLLTEMDGFKENKG--VIVVGATNRADILDAALLRPGRFDRQVTVNLPD 357

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           +  R  IL+     + + +D+   +LA  T G+SG+DL NL   AA
Sbjct: 358 RLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAA 403

---

>PEX6_YEAST (P33760) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS8)
          Length = 1030

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 55/166 (33%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A +  P +IF DE+DS+  +R   G+
Sbjct: 786  ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKRGNQGD 845

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
                M +I ++ ++  DG +S   + + V+ ATNRP  LDEA++R  RF++ + +G+P  
Sbjct: 846  SGGVMDRIVSQLLAELDG-MSTDADGVFVIGATNRPDLLDEALLRPGRFDKLLYLGIPDT 904

Query: 354  ESREL-ILRTVLSKEKVDKDIEYKELATMTE-GYSGSDLKNLCVTA 485
            ++++L IL  +  K  +D D++  ELA +    Y+G+D   LC  A
Sbjct: 905  DTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTGADFYALCSDA 950

---

>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 90.1 bits (222), Expect = 4e-18
 Identities = 59/166 (35%), Positives = 95/166 (57%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A    A+F+ ++   +   + G+  K VR  F LA + +P IIF+DE+D++  +R     
Sbjct: 221 AAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAIGTKRFDSEV 280

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG    S +RI V+AATNR   LD A++R  R +R+I    P
Sbjct: 281 SGDREVQRTML-ELLNQLDGF--SSDDRIKVIAATNRADILDPALMRSGRLDRKIEFPHP 337

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           T+E+R  IL+    K  V+ D+ ++ELA  T+ ++G+ LK +CV A
Sbjct: 338 TEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEA 383

---

>PRS6B_RAT (Q63570) 26S protease regulatory subunit 6B (TAT-binding protein 7)|
           (TBP-7)
          Length = 418

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A+   A+FI V  S    K+ GE  + VR +F LA + AP IIF+DE+D++  +R  A+ 
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 280 GADREVQRILLELLNQMDGF--DQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 337

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
           +  + LI  T+ SK  + ++++ ++     +  SG+D+ ++C
Sbjct: 338 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSIC 379

---

>PRS6B_MOUSE (P54775) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7) (CIP21)
          Length = 418

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A+   A+FI V  S    K+ GE  + VR +F LA + AP IIF+DE+D++  +R  A+ 
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 280 GADREVQRILLELLNQMDGF--DQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 337

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
           +  + LI  T+ SK  + ++++ ++     +  SG+D+ ++C
Sbjct: 338 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSIC 379

---

>PRS6B_HUMAN (P43686) 26S protease regulatory subunit 6B (MIP224)|
           (MB67-interacting protein) (TAT-binding protein 7)
           (TBP-7)
          Length = 418

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 52/162 (32%), Positives = 90/162 (55%), Gaps = 4/162 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A+   A+FI V  S    K+ GE  + VR +F LA + AP IIF+DE+D++  +R  A+ 
Sbjct: 220 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQT 279

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 280 GADREVQRILLELLNQMDGF--DQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 337

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
           +  + LI  T+ SK  + ++++ ++     +  SG+D+ ++C
Sbjct: 338 RRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSIC 379

---

>PR6AB_XENLA (O42586) 26S protease regulatory subunit 6A-B (TAT-binding protein|
           10) (TBP-10)
          Length = 404

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 55/161 (34%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---ARCGEHE 188
           A+F+ ++   +   + G+  K VR  FSLA + AP+IIF+DE+D++  +R    + G+ E
Sbjct: 211 ATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDAIGNKRFDSEKAGDRE 270

Query: 189 AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESR 362
             R +  E ++  DG    +  ++ V+AATNR   LD A++R  R +R+I   +P +E+R
Sbjct: 271 VQRTML-ELLNQLDGFQPTT--QVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 327

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             I++    K  V  D+ Y+ELA  T+ ++G+  K +CV A
Sbjct: 328 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 368

---

>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 57/166 (34%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +A   F   S S     + G     +R LF  A   AP +IF+DE+DS+ G+R     
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPM 394

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
           H   R+   + ++  DG   K  E ++++ ATN P  LD A+IR  RF+ ++ V  P  +
Sbjct: 395 HPYSRQTIIQLLAEMDGF--KPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVK 452

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYR 494
            R  IL+  L+K K DK ++ + +A  T G+SG++L+NL   AA +
Sbjct: 453 GRTEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALK 498

---

>PRS4_CAEEL (O16368) Probable 26S protease regulatory subunit 4|
          Length = 443

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 53/165 (32%), Positives = 93/165 (56%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ +  S +  K+ G+  K VR LF +A + AP+I+F+DE+D++  +R  +  
Sbjct: 243 ANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNS 302

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + VL ATNR   LD A+IR  R +R+I   LP 
Sbjct: 303 GGEREIQRTMLELLNQLDGFDSRGD--VKVLMATNRIESLDPALIRPGRIDRKIEFPLPD 360

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           ++++  I +   S+  + K++  +E  T  +  SG+D+K +C  A
Sbjct: 361 EKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEA 405

---

>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F  +S S     + G     VR LF  A + +P IIFVDE+D++  QR     
Sbjct: 217 AGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGTGLG 276

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   ++G  ++++AATNRP  LD A++R  RF+R+I V  P 
Sbjct: 277 GGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRFDRQIPVSNPD 334

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  +LR     + +  D +   LA  T G +G+DL N+   AA
Sbjct: 335 LAGRRAVLRVHSKGKPIADDADLDGLAKRTVGMTGADLANVVNEAA 380

---

>PSMR1_HALSA (Q9HNP9) Proteasome-activating nucleotidase 1 (Proteasome|
           regulatory subunit 1)
          Length = 411

 Score = 89.4 bits (220), Expect = 7e-18
 Identities = 61/166 (36%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA---R 173
           AN   ASFI ++ S +  K+ GE  + VR LF LA +  P IIF+DE+D++  +R     
Sbjct: 207 ANQTDASFIKMAGSELVRKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT 266

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + +S  DG   +   RI  +AATNR   LD AI+R  RF+R I V  P
Sbjct: 267 SGDAEVQRTMM-QLLSEMDGFDERGDIRI--IAATNRFDMLDSAILRPGRFDRLIEVPNP 323

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             ++RE IL     +  V   +++ +LA  T  +SG+ L +L   A
Sbjct: 324 NPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEA 369

---

>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F  +S S     + G     VR LF  A + +P IIFVDE+D++  QR     
Sbjct: 217 AGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLG 276

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   ++G  ++++AATNRP  LD A++R  RF+R+I V  P 
Sbjct: 277 GGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRFDRQIPVSNPD 334

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  +LR     + +  D +   LA  T G +G+DL N+   AA
Sbjct: 335 LAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAA 380

---

>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 58/166 (34%), Positives = 87/166 (52%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A +AG  F  +S S     + G     VR LF  A + +P IIFVDE+D++  QR     
Sbjct: 217 AGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLG 276

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG   ++G  ++++AATNRP  LD A++R  RF+R+I V  P 
Sbjct: 277 GGHDEREQTLNQLLVEMDGFGDRAG--VILIAATNRPDILDPALLRPGRFDRQIPVSNPD 334

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              R  +LR     + +  D +   LA  T G +G+DL N+   AA
Sbjct: 335 LAGRRAVLRVHSKGKPMAADADLDGLAKRTVGMTGADLANVINEAA 380

---

>PRS6B_MANSE (P46507) 26S protease regulatory subunit 6B (ATPase MS73)|
          Length = 415

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A+   A+FI V  S    K+ GE  + VR +F LA + +P IIF+DE+D++  +R  A+ 
Sbjct: 217 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQT 276

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 277 GADREVQRILLELLNQMDGF--DQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 334

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
           +  + LI  T+ +K  + ++++ +E     +  SG+D+  +C  A    V
Sbjct: 335 RRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAV 384

---

>PRS6A_RAT (Q63569) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Spermatogenic cell/sperm-associated TAT-binding
           protein homolog SATA)
          Length = 439

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---ARCGEHE 188
           A+F+ ++   +   + G+  K VR  F+LA + AP+IIF+DE+D++  +R    + G+ E
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 305

Query: 189 AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESR 362
             R +  E ++  DG   +   ++ V+AATNR   LD A++R  R +R+I   +P +E+R
Sbjct: 306 VQRTML-ELLNQLDGF--QPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             I++    K  V  D+ Y+ELA  T+ ++G+  K +CV A
Sbjct: 363 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 403

---

>PRS6A_HUMAN (P17980) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1) (Proteasome subunit P50)
          Length = 439

 Score = 88.6 bits (218), Expect = 1e-17
 Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---ARCGEHE 188
           A+F+ ++   +   + G+  K VR  F+LA + AP+IIF+DE+D++  +R    + G+ E
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 305

Query: 189 AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESR 362
             R +  E ++  DG   +   ++ V+AATNR   LD A++R  R +R+I   +P +E+R
Sbjct: 306 VQRTML-ELLNQLDGF--QPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 362

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             I++    K  V  D+ Y+ELA  T+ ++G+  K +CV A
Sbjct: 363 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEA 403

---

>PRS6A_MOUSE (O88685) 26S protease regulatory subunit 6A (TAT-binding protein 1)|
           (TBP-1)
          Length = 442

 Score = 88.2 bits (217), Expect = 2e-17
 Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 5/161 (3%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---ARCGEHE 188
           A+F+ ++   +   + G+  K VR  F+LA + AP+IIF+DE+D++  +R    + G+ E
Sbjct: 249 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 308

Query: 189 AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESR 362
             R +  E ++  DG   +   ++ V+AATNR   LD A++R  R +R+I   +P +E+R
Sbjct: 309 VQRTML-ELLNQLDGF--QPNTQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 365

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             I++    K  V  D+ Y+ELA  T+ ++G+  K +CV A
Sbjct: 366 ARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQSKAVCVEA 406

---

>PRS4_ORYSA (P46466) 26S protease regulatory subunit 4 homolog (TAT-binding|
           protein homolog 2)
          Length = 448

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 53/165 (32%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  K VR LF +A +++P+I+F+DE+D++  +R  A  
Sbjct: 248 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGTKRYDAHS 307

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 308 GGEREIQRTMLELLNQLDGFDSRGD--VKVILATNRIESLDPALLRPGRIDRKIEFPLPD 365

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            ++R  I +   SK  +  D+  +E     + +SG+D+K +C  A
Sbjct: 366 IKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEA 410

---

>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A +A   F ++S S     + G     VR +F    + AP IIF+DE+D++   R     
Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ +   DG   ++ E ++++AATNRP  LD A++R  RF+R+I V  P 
Sbjct: 269 GGNDEREQTLNQMLVEMDGF--EANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPD 326

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  L K K +  +  + +A  T G+SG++L NL   AA
Sbjct: 327 INGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAA 372

---

>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 56/166 (33%), Positives = 89/166 (53%), Gaps = 4/166 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A +A   F ++S S     + G     VR +F    + AP IIF+DE+D++   R     
Sbjct: 209 AGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMG 268

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G ++   +  N+ +   DG   ++ E ++++AATNRP  LD A++R  RF+R+I V  P 
Sbjct: 269 GGNDEREQTLNQMLVEMDGF--EANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPD 326

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
              RE IL+  L K K +  +  + +A  T G+SG++L NL   AA
Sbjct: 327 INGREQILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAA 372

---

>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1021

 Score = 87.4 bits (215), Expect = 3e-17
 Identities = 57/166 (34%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P +IF DE+DS+  +R   G+
Sbjct: 777  ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGD 836

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-PT 350
                M +I ++ ++  DG LS  G+ + V+ ATNRP  LDEA++R  RF++ + +G+  T
Sbjct: 837  SGGVMDRIVSQLLAELDG-LSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDT 895

Query: 351  QESRELILRTVLSKEKVDKDIEYKELATMTE-GYSGSDLKNLCVTA 485
             E +  ILR +  K  +D D+   +LA      Y+G+D   LC  A
Sbjct: 896  NEKQANILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDA 941

---

>PRS7_ARATH (Q9SSB5) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1a) (Regulatory
           particle triple-A ATPase subunit 1a)
          Length = 426

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      I+F DEVD++ G R     
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG  ++    I VL ATNRP  LD A++R  R +R++  GLP
Sbjct: 283 GGDNEVQRTML-EIVNQLDGFDARG--NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             ESR  I +        ++DI ++ LA +    +G+D++++C  A
Sbjct: 340 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385

---

>PRS7_PRUPE (O64982) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 425

 Score = 87.0 bits (214), Expect = 4e-17
 Identities = 58/166 (34%), Positives = 89/166 (53%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      I+F DEVD++ G R     
Sbjct: 222 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 281

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG  ++    I VL ATNRP  LD A++R  R +R++  GLP
Sbjct: 282 GGDNEVQRTML-EIVNQLDGFDARG--NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 338

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             ESR  I +        ++DI ++ LA +    +G+D++++C  A
Sbjct: 339 DLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 384

---

>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 58/169 (34%), Positives = 88/169 (52%), Gaps = 7/169 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--- 173
           A +AG  F  VS S     + G     VR LF  A + AP+I+F+DE+D++   R +   
Sbjct: 402 AGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEIDAIGKARQKGNF 461

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G ++      N+ +   DG      + ++VLA TNRP  LD+A++R  RF+R I +  P
Sbjct: 462 SGANDERENTLNQMLVEMDGF--TPADHVVVLAGTNRPDILDKALLRPGRFDRHINIDKP 519

Query: 348 TQESRELILRTVLSKEKVDKDI--EYKELATMTEGYSGSDLKNLCVTAA 488
             E R+ I    L   K+  +I      LA +T G+SG+D+ N+C  AA
Sbjct: 520 ELEGRKAIFAVHLHHLKLAGEIFDLKNRLAALTPGFSGADIANVCNEAA 568

---

>PRS6B_DICDI (P34123) 26S protease regulatory subunit 6B homolog (TAT-binding|
           protein homolog 2)
          Length = 403

 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 50/170 (29%), Positives = 93/170 (54%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A+   A+FI V  S    K+ GE  + VR +F LA + +P IIF+DE+D++  +R  A+ 
Sbjct: 205 AHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQT 264

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 265 GADREVQRILMELLNQMDGF--DVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPD 322

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
           +  + LI + + SK  +  +++ ++  +  +  SG++++++C  A    +
Sbjct: 323 RRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAI 372

---

>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 86.7 bits (213), Expect = 5e-17
 Identities = 58/166 (34%), Positives = 86/166 (51%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +A   F + + S       G+  + VR LF  A   AP IIF+DE+DS+  +R     
Sbjct: 255 AGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSVGSKRVSNSI 314

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
           H    +  N+ +S  DG     G  I+V+AATNR  DLD+A++R  RF+ R+ V  P   
Sbjct: 315 HPYANQTINQLLSEMDGFTRNEG--IIVIAATNRVDDLDKALLRPGRFDVRVTVPKPDLA 372

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYR 494
            R  I    LSK      I+ K LA  + G++G+D++N+   AA +
Sbjct: 373 GRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALK 418

---

>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 57/174 (32%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR----A 170
           A +A   F++VS S     + G     VR LF+ A  +AP+IIF+DE+D++  +R    A
Sbjct: 342 AGEANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEIDAIGKERGKGGA 401

Query: 171 RCGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
             G ++      N+ +   DG    + ++++VLA TNRP  LD A++R  RF+R I +  
Sbjct: 402 LGGANDEREATLNQLLVEMDGF--TTSDQVVVLAGTNRPDVLDNALMRPGRFDRHIQIDS 459

Query: 345 PTQESRELILRTVLSKEKVDKDIE------YKELATMTEGYSGSDLKNLCVTAA 488
           P    R+ I    L +  +D  +         +LAT+T G++G+D+ N C  AA
Sbjct: 460 PDVNGRQQIYLVHLKRLNLDPLLTDDMNNLSGKLATLTPGFTGADIANACNEAA 513

---

>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 60/166 (36%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA---R 173
           A+   ASFI ++ S +  K+ GE  K VR LF +A    P ++F+DE+D++  +R     
Sbjct: 204 ASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARDHEPAVVFIDEIDAIASKRTDSKT 263

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  + +S  DG   +   RI  +AATNR   LD AI+R  RF+R I V  P
Sbjct: 264 SGDAEVQRTMM-QLLSEMDGFDERGDIRI--IAATNRFDMLDRAILRPGRFDRLIEVPHP 320

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
               RE I R       V   +++ ELA  T   SG+D+K +C  A
Sbjct: 321 NVGGREKIFRIHTRAMNVADSVDFGELAADTGDLSGADVKAICTEA 366

---

>PRS8_SCHPO (P41836) 26S protease regulatory subunit 8 homolog (Protein let1)|
          Length = 403

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRA---- 170
           A+     FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R+    
Sbjct: 200 AHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSDSSG 259

Query: 171 RCGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
             G+ E  R +  E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    
Sbjct: 260 GSGDSEVQRTML-ELLNQLDGF--EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPP 316

Query: 345 PTQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           P+ E+R  ILR       + + I+ K +A    G SG++LK +C  A
Sbjct: 317 PSAEARAEILRIHSRSMNLTRGIDLKSIAEKMNGASGAELKGVCTEA 363

---

>PRS4_DROME (P48601) 26S protease regulatory subunit 4 (P26s4)|
          Length = 439

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  K VR LF +A + AP+I+F+DE+D++  +R  +  
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNS 298

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + V+ ATNR   LD A+IR  R +R+I   LP 
Sbjct: 299 GGEREIQRTMLELLNQLDGFDSRGD--VKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 356

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           ++++  I     S+  + +D+   EL    +  SG+D+K +C  A
Sbjct: 357 EKTKRRIFTIHTSRMTLAEDVNLSELIMAKDDLSGADIKAICTEA 401

---

>PRS6B_ENCCU (Q8SQI9) 26S protease regulatory subunit 6B homolog|
          Length = 387

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 51/165 (30%), Positives = 88/165 (53%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+FI V+ S    K+ GE  + VR +F LA + AP+I+F+DEVDS+  +R  A  
Sbjct: 189 ANHTKATFIRVNGSEFVQKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDAST 248

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                ++++  E ++  DG        + V+ ATNR   +D A++R  R +R+I   LP 
Sbjct: 249 SADREVQRVLIELLNQMDGF--DPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPD 306

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +  + L+   + SK  ++  ++ + L    E  S +D+ ++C  A
Sbjct: 307 RRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEA 351

---

>PRS7_SPIOL (Q41365) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      I+F DEVD++ G R     
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG  ++    I VL ATNRP  LD A++R  R +R++  GLP
Sbjct: 283 GGDNEVQRTML-EIVNQLDGFDARG--NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I +        ++DI ++ LA +    +G+D++++C  A
Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385

---

>PRS7_ORYSA (Q9FXT9) 26S protease regulatory subunit 7 (26S proteasome subunit|
           7) (26S proteasome AAA-ATPase subunit RPT1) (Regulatory
           particle triple-A ATPase subunit 1)
          Length = 426

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      I+F DEVD++ G R     
Sbjct: 223 ANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGV 282

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG  ++    I VL ATNRP  LD A++R  R +R++  GLP
Sbjct: 283 GGDNEVQRTML-EIVNQLDGFDARG--NIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP 339

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I +        ++DI ++ LA +    +G+D++++C  A
Sbjct: 340 DLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEA 385

---

>PRS8_MANSE (P54814) 26S protease regulatory subunit 8 (18-56 protein)|
          Length = 402

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R   G 
Sbjct: 200 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 259

Query: 183 --HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 260 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPN 317

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 318 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 362

---

>PRS8_DROME (O18413) 26S protease regulatory subunit 8|
          Length = 405

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R   G 
Sbjct: 203 AHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS 262

Query: 183 --HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
                +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 263 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPN 320

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 321 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 365

---

>PRS10_YEAST (P53549) 26S protease subunit RPT4 (26S protease subunit SUG2)|
           (Proteasomal cap subunit)
          Length = 437

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 54/163 (33%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
 Frame = +3

Query: 15  GASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCG---EH 185
           GA+FI    S I  K+ GE  + +R +F+ A +  P IIF+DEVD++ G+R   G   + 
Sbjct: 240 GANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADR 299

Query: 186 EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQES 359
           E  R +  E ++  DG  +    +I++  ATNRP  LD A++R  R +R++ + LP +  
Sbjct: 300 EIQRTLM-ELLTQMDGFDNLGQTKIIM--ATNRPDTLDPALLRPGRLDRKVEIPLPNEAG 356

Query: 360 RELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           R  I +   +K K   + +++    M++G++G+D++N C T A
Sbjct: 357 RLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRN-CATEA 398

---

>PRS4_RAT (P62193) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  K VR LF +A + AP+I+F+DE+D++  +R  +  
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + V+ ATNR   LD A+IR  R +R+I   LP 
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGD--VKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +++++ I +   S+  +  D+   +L    +  SG+D+K +C  A
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402

---

>PRS4_MOUSE (P62192) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  K VR LF +A + AP+I+F+DE+D++  +R  +  
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + V+ ATNR   LD A+IR  R +R+I   LP 
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGD--VKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +++++ I +   S+  +  D+   +L    +  SG+D+K +C  A
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402

---

>PRS4_HUMAN (P62191) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  K VR LF +A + AP+I+F+DE+D++  +R  +  
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNS 299

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + V+ ATNR   LD A+IR  R +R+I   LP 
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGD--VKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +++++ I +   S+  +  D+   +L    +  SG+D+K +C  A
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEA 402

---

>PRS2_METJA (Q58889) Putative 26S protease regulatory subunit homolog MJ1494|
          Length = 371

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 51/155 (32%), Positives = 78/155 (50%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +  +SFI V    +  +  G+  K +R L+  A++ AP I+F+DE+D++   R     
Sbjct: 175 ATETNSSFILVKAPELIGEHVGDASKMIRELYQRASESAPCIVFIDELDAIGLSREYQSL 234

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
              + ++ N  ++  DGI  K  E ++ +AATN P  LD AI  RFE  I   LP  E R
Sbjct: 235 RGDVSEVVNALLTELDGI--KENEGVVTIAATNNPAMLDPAIRSRFEEEIEFKLPNDEER 292

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLK 467
             I+     K  +      KE    T+G+SG D+K
Sbjct: 293 LKIMELYAKKMPLPVKANLKEFVEKTKGFSGRDIK 327

---

>PRS8_RAT (P62198) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R     
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 264 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 322 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 366

---

>PRS8_PIG (P62197) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (TAT-binding
           protein homolog 10) (TBP10)
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R     
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 264 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 322 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 366

---

>PRS8_MOUSE (P62196) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (mSUG1)
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R     
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 264 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 322 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 366

---

>PRS8_HUMAN (P62195) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5) (Thyroid
           hormone receptor-interacting protein 1) (TRIP1)
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R     
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 264 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 322 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 366

---

>PRS8_BOVIN (P62194) 26S protease regulatory subunit 8 (Proteasome subunit p45)|
           (p45/SUG) (Proteasome 26S subunit ATPase 5)
          Length = 406

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 55/165 (33%), Positives = 92/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R     
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGS 263

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 264 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 322 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 366

---

>PRS8_XENLA (P46470) 26S protease regulatory subunit 8 (SUG1 homolog) (xSUG1)|
          Length = 461

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--C 176
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS +G R     
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS-IGSRLEGGS 257

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   ++ + I V+ ATNR   LD A++R  R +R+I    P 
Sbjct: 258 GGDSEVQRTMLELLNQLDGF--EATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 315

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +E+R  IL+    K  + + I  +++A +  G SG+++K +C  A
Sbjct: 316 EEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEA 360

---

>PRS4_CHICK (Q90732) 26S protease regulatory subunit 4 (P26s4) (Proteasome 26S|
           subunit ATPase 1)
          Length = 440

 Score = 84.3 bits (207), Expect = 2e-16
 Identities = 52/165 (31%), Positives = 91/165 (55%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  K VR LF +A +  P+I+F+DE+D++  +R  +  
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKRYDSNS 299

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG  S+    + V+ ATNR   LD A+IR  R +R+I   LP 
Sbjct: 300 GGEREIQRTMLELLNQLDGFDSRGD--VKVIMATNRIETLDPALIRPGRIDRKIEFPLPD 357

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +++++ I +   S+  +  D+   EL    +  SG+D+K +C  A
Sbjct: 358 EKTKKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEA 402

---

>PEX6_YARLI (P36966) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAY4)
          Length = 1024

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 49/160 (30%), Positives = 89/160 (55%), Gaps = 5/160 (3%)
 Frame = +3

Query: 21   SFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEH-EAMR 197
            +F +V    + + + GE E NVR +F  A    P ++F DE+DS+  QR   G+    M 
Sbjct: 779  NFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPQRGNQGDSGGVMD 838

Query: 198  KIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-PTQESREL 368
            +I ++ ++  DG+ +  GE + V+ ATNRP  LDEA++R  RF++ + +G+  T E ++ 
Sbjct: 839  RIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRFDKMLYLGISDTHEKQQT 898

Query: 369  ILRTVLSKEKVDKDIEYKELATMTE-GYSGSDLKNLCVTA 485
            I+  +  K ++  D+  + ++      ++G+D   LC  A
Sbjct: 899  IMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDA 938



 Score = 40.4 bits (93), Expect = 0.004
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 12/178 (6%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A   G S   +S   +      +    +RA    A   +P ++ +  ++S+  +  + G+
Sbjct: 491  AAQCGISVFEISCFGLIGDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLESIAKKSDQDGK 550

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
             E    I ++ +   D +   SG  +L+ A +N P  + EAI  RF+  I +G+P++  R
Sbjct: 551  DEG---IVSKLV---DVLADYSGHGVLLAATSNDPDKISEAIRSRFQFEIEIGVPSEPQR 604

Query: 363  ELILRTVLSKE------------KVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
              I  + L+K              +  D+  + LA  + G +  DL  +  T   R +
Sbjct: 605  RQIF-SHLTKSGPGGDSIRNAPISLRSDVSVENLALQSAGLTPPDLTAIVQTTRLRAI 661

---

>PRS8_NAEFO (Q25544) 26S protease regulatory subunit 8 homolog (TAT-binding|
           protein homolog)
          Length = 414

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 55/166 (33%), Positives = 92/166 (55%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A+    +FI VS S +  K+ GE  K VR LF +A + AP+IIF+DE+DS+   R   G+
Sbjct: 211 AHHTDCTFIRVSGSELVQKYIGEGSKMVRELFVMAREHAPSIIFMDEIDSIGSTRTEGGK 270

Query: 183 ---HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
                 +++   E ++  DG   +S + I ++ ATNR   LD A++R  R +R+I    P
Sbjct: 271 GGGDSEVQRTMLELLNQLDGF--ESTQNIKIIMATNRIDILDPALLRPGRIDRKIEFPNP 328

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            + +R  IL+    +  + + I  +++A+M  G SG+++K  C  A
Sbjct: 329 NELARLDILKIHSRRMNLTRGINLRKIASMLGGASGAEIKATCTEA 374

---

>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 83.6 bits (205), Expect = 4e-16
 Identities = 56/166 (33%), Positives = 88/166 (53%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      +IF DE+D++ G R    +
Sbjct: 232 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAVGGARFDDGQ 291

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I VL ATNRP  LD A++R  R +R++   LP
Sbjct: 292 GGDNEVQRTML-ELINQLDGFDPRG--NIKVLMATNRPDTLDPALMRPGRLDRKVEFALP 348

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
               R  IL+    +  V++DI Y  LA +    +G++++++C  A
Sbjct: 349 DLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEA 394

---

>PRS6B_ARATH (Q9SEI4) 26S protease regulatory subunit 6B homolog (26S proteasome|
           AAA-ATPase subunit RPT3) (Regulatory particle triple-A
           ATPase subunit 3)
          Length = 408

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+FI V  S    K+ GE  + VR +F LA + AP IIF+DEVD++   R  A+ 
Sbjct: 210 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 269

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 270 GADREVQRILMELLNQMDGF--DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 327

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
           +  + L+ +   SK  +  +++ ++  +  +  S +++  +C  A    V
Sbjct: 328 RRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAV 377

---

>PRS6B_ASPNG (P78578) 26S protease regulatory subunit 6B homolog|
          Length = 423

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 55/171 (32%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   ASFI V+ S    K+ GE  + VR +F +A + +P IIF+DE+D++  +R  A+ 
Sbjct: 221 ANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQT 280

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRI-MVGLP 347
           G    +++I  E ++  DG   +    + V+ ATNR   LD A++R  R +R+I    L 
Sbjct: 281 GADREVQRILLELLNQMDGF--EQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLR 338

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            +  R LI  T+ SK  +  +++   L    E  SG+ +  +   A  R V
Sbjct: 339 DRRERRLIFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAV 389

---

>PRS4_SCHPO (P36612) 26S protease regulatory subunit 4 homolog (Protein mts2)|
          Length = 448

 Score = 83.2 bits (204), Expect = 5e-16
 Identities = 51/159 (32%), Positives = 89/159 (55%), Gaps = 4/159 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ V  S +  K+ G+  + VR LF+ A + +P+I+F+DE+D++  +R  A+ 
Sbjct: 246 ANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKRYDAQS 305

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG    S   I V+ ATNR  DLD A+IR  R +R+I+   P 
Sbjct: 306 GAEREIQRTMLELLNQLDG-FDTSQRDIKVIMATNRISDLDPALIRPGRIDRKILFENPD 364

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLK 467
           + ++  I     SK  + +D+  +EL    +  SG+++K
Sbjct: 365 EATKRKIFTIHTSKMNLGEDVNLEELIQCKDDLSGAEIK 403

---

>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 53/163 (32%), Positives = 89/163 (54%), Gaps = 5/163 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSML---GQRAR 173
           AN A ASF ++S + + S + GE E  +R  F  A   +P+IIF DE D +    G  + 
Sbjct: 341 ANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLASPSIIFFDEADVVACKRGDESS 400

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
                   ++ +  ++  DG+    G  ILVLAATNRP+ +D A++R  RF+  + V  P
Sbjct: 401 SNSSTVGERLLSTLLTEMDGLEEAKG--ILVLAATNRPYAIDAALMRPGRFDLVLYVPPP 458

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
             E+R  IL+       +  D++ +++A  T+ ++G++L+ LC
Sbjct: 459 DLEARFEILQVHTRNMTLGDDVDLRKIAEETDLFTGAELEGLC 501



 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 50/163 (30%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
 Frame = +3

Query: 9   DAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVA----PTIIFVDEVDSMLGQRARC 176
           +  A  I +S  ++     GE EK +R  F+ A+  A    P++IF+DE+D +  +R   
Sbjct: 79  ECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDAR 138

Query: 177 GEHEAMRKIKNEFMSHWDGIL-SKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            E +   +I ++  +  D    S S  R++V+A+TNR   +D A+ R  RF+  + V  P
Sbjct: 139 REQDV--RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALVEVSTP 196

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLC 476
            +E R  IL+    K  +D  ++ + +A    GY G+DL+ LC
Sbjct: 197 NEEDRLKILQLYTKKVNLDPSVDLQAIAISCNGYVGADLEALC 239

---

>PRS8_YEAST (Q01939) 26S protease regulatory subunit 8 homolog (SUG1 protein)|
           (CIM3 protein) (TAT-binding protein TBY1)
          Length = 405

 Score = 82.8 bits (203), Expect = 7e-16
 Identities = 56/166 (33%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRAR--- 173
           A+     FI VS + +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R     
Sbjct: 203 AHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTRVEGSG 262

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G+ E  R +  E ++  DG   ++ + I ++ ATNR   LD A++R  R +R+I    P
Sbjct: 263 GGDSEVQRTML-ELLNQLDGF--ETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPPP 319

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
           +  +R  ILR    K  + + I  +++A    G SG+D+K +C  A
Sbjct: 320 SVAARAEILRIHSRKMNLTRGINLRKVAEKMNGCSGADVKGVCTEA 365

---

>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      +IF DE+D++ G R     
Sbjct: 230 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 289

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I VL ATNRP  LD A++R  R +R+I   LP
Sbjct: 290 GGDNEVQRTML-ELINQLDGFDPRG--NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 346

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I +       V++DI ++ LA +    +G++++++C  A
Sbjct: 347 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 392

---

>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      +IF DE+D++ G R     
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I VL ATNRP  LD A++R  R +R+I   LP
Sbjct: 289 GGDNEVQRTML-ELINQLDGFDPRG--NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I +       V++DI ++ LA +    +G++++++C  A
Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 391

---

>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 82.4 bits (202), Expect = 9e-16
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      +IF DE+D++ G R     
Sbjct: 229 ANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I VL ATNRP  LD A++R  R +R+I   LP
Sbjct: 289 GGDNEVQRTML-ELINQLDGFDPRG--NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I +       V++DI ++ LA +    +G++++++C  A
Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 391

---

>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A   G +FI++    I +K+ G  E++VR LF  A    P I+F DE DS+  +R     
Sbjct: 854  AAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDST 913

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                R + N+ ++  DG     G  + VLAAT+RP  +D A++R  R ++ ++  +P  +
Sbjct: 914  GVTDRVV-NQMLTQMDGAEGLDG--VYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFD 970

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
             R  IL++V     V K +    +A    G+SG+DL+ L   A  + V
Sbjct: 971  DRLDILQSVTRNMNVSKSVNLSSVAGECSGFSGADLQALAYNAYLKAV 1018



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
 Frame = +3

Query: 57  KWFGEDEKNVRALF----SLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSH 224
           K   E   N+R +F    S  +  AP+++ ++++DS++       +    R++   F+S 
Sbjct: 554 KIMSESYNNLRGIFEDIFSEVSWKAPSLLILEDLDSLIPAEQEHSDSSQSRQLSEYFISK 613

Query: 225 WDGILSKSGERILVLAATNRPFDLDEAII--RRFERRIMVGLPTQESRELILRTVLSKEK 398
                      I +LA++     L+  I      E    +  P +E+R+ IL++ L    
Sbjct: 614 LSA--QTINRDITILASSKSKESLNSLIFTTHLIEHDFQLRAPDKEARKQILQSYLDTLN 671

Query: 399 V--DKDIEYKELATMTEGYSGSDLKNLC 476
           V   +      +A  TEGY   DLK LC
Sbjct: 672 VFCSEGELLNNIAVETEGYLPKDLKVLC 699

---

>PEX6_SCHPO (O13764) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 948

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 47/166 (28%), Positives = 91/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +    F+++    + + + GE E NVR +F  A   +P +IF DE+DS+   R    +
Sbjct: 709  ATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSSD 768

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-PT 350
                M ++ ++ ++  D I   + + + V+ ATNRP  LD +++R  RF++ + +G+  +
Sbjct: 769  SGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINKS 828

Query: 351  QESRELILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTA 485
            +ES+  +LR +    K+D+ I+  E+A      ++G+D+  LC  A
Sbjct: 829  EESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDA 874

---

>PEX6_PICAN (Q9UVU5) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1135

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 52/167 (31%), Positives = 93/167 (55%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P +IF DE+DS+  +R   G+
Sbjct: 867  ATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGD 926

Query: 183  H-EAMRKIKNEFMSHWDGIL-SKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-P 347
                M +I ++ ++  DG+  ++ G+ + V+ ATNRP  LDEA++R  RF++ + +G+  
Sbjct: 927  SGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGIAD 986

Query: 348  TQESRELILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTA 485
            T E +  I++ +  K ++D  ++   +A T    Y+G+D   LC  A
Sbjct: 987  THEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSDA 1033



 Score = 32.3 bits (72), Expect = 1.0
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
 Frame = +3

Query: 261 LVLAATNRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEKV-DK-------DIE 416
           + + +TN    + E I  +F+  I + +PT+  R+LIL  +L   K  DK       D+ 
Sbjct: 668 IFIGSTNDADAISELIRSKFKFDISINVPTEPERKLILTDLLDDMKTKDKTPVVLRPDVS 727

Query: 417 YKELATMTEGYSGSDLKNL 473
              LA  + G + +DL ++
Sbjct: 728 LDTLALQSAGLTANDLVSI 746

---

>PRS8_DICDI (P34124) 26S protease regulatory subunit 8 (TAT-binding protein|
           homolog 10) (Fragment)
          Length = 389

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A+    +FI VS S +  K+ GE  + VR LF +A + AP+IIF+DE+DS+   R   G 
Sbjct: 186 AHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESGS 245

Query: 183 ---HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
                 +++   E ++  DG   +S + I VL  TNR   LD A++R  R +R+I    P
Sbjct: 246 GGGDSEVQRTMLELLNQLDGF--ESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNP 303

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
               R  IL+    K  + + I  K+++    G SG++LK +C  A
Sbjct: 304 GDAGRLDILKIHSRKMNLTRGINLKKISDKMNGASGAELKAVCTEA 349

---

>TBP7_YEAST (P40340) TAT-binding homolog 7|
          Length = 1379

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 53/150 (35%), Positives = 84/150 (56%), Gaps = 3/150 (2%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHW 227
           I SKW GE E+ +R LF  A K  P+IIF DE+D +   R+   + +    I +  ++  
Sbjct: 488 ILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVRS-SKQEQIHASIVSTLLALM 546

Query: 228 DGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKV 401
           DG+ ++   +++V+ ATNRP  +D A+ R  RF+R     LP  ++R  IL+    K   
Sbjct: 547 DGMDNRG--QVIVIGATNRPDAVDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSS 604

Query: 402 DKDIEY-KELATMTEGYSGSDLKNLCVTAA 488
                +  +LA +T+GY G+DL++LC  AA
Sbjct: 605 PLSTNFIDKLAFLTKGYGGADLRSLCTEAA 634

---

>ATAD2_HUMAN (Q6PL18) ATPase family AAA domain-containing protein 2|
          Length = 1390

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDG 233
           SKW GE E+ +R LF  A ++ P+IIF DE+D +   R+   + +    I +  ++  DG
Sbjct: 503 SKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRS-SRQDQIHSSIVSTLLALMDG 561

Query: 234 ILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKVDK 407
           + S+    I+V+ ATNR   +D A+ R  RF+R  +  LP +E+R+ IL+ + +++   K
Sbjct: 562 LDSRG--EIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILK-IHTRDWNPK 618

Query: 408 DIE--YKELATMTEGYSGSDLKNLCVTAA 488
            ++   +ELA    GY G+D+K++C  AA
Sbjct: 619 PLDTFLEELAENCVGYCGADIKSICAEAA 647

---

>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 56/166 (33%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A FI V  S +  K+ GE  + VR LF +A      +IF DE+D++ G R     
Sbjct: 229 ANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGA 288

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I VL ATNRP  LD A++R  R +R+I   LP
Sbjct: 289 GGDNEVQRTML-ELINQLDGFDPRG--NIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP 345

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I +       V++DI ++ LA +    +G++++++C  A
Sbjct: 346 DLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEA 391

---

>PEX6_KLULA (Q6CPV1) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1000

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 51/166 (30%), Positives = 92/166 (55%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A++   +F +V    + + + GE E NVR +F  A    P +IF DE+DS+  +R   G+
Sbjct: 756  ASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGD 815

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-PT 350
                M +I ++ ++  DG +S  G+ + V+ ATNRP  LDEA++R  RF++ + +G+  T
Sbjct: 816  SGGVMDRIVSQLLAELDG-MSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGISDT 874

Query: 351  QESRELILRTVLSKEKVDKDIEYKELATMTE-GYSGSDLKNLCVTA 485
             + +  I++ +  K  ++  I+  ++A      Y+G+D   LC  A
Sbjct: 875  DKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDA 920

---

>PRS2_METTM (P42811) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 46/162 (28%), Positives = 81/162 (50%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+       +  +++  +  G+  + +  L+ LA+K AP++IF+DE+D++   R     
Sbjct: 178 ANELRVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRFQSL 237

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
              + ++ N  ++  DGI    G  ++ + ATN P  LD AI  RFE  I   LP  + R
Sbjct: 238 RGDVSEVVNALLTEMDGINQNWG--VVTIGATNNPELLDNAIRSRFEEEIEFKLPGDDER 295

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            ++L   +    +D D    +L  +T+G SG D+K   +  A
Sbjct: 296 RMMLEKYIETMPLDVDFSVDKLVKLTKGMSGRDIKERVLKTA 337

---

>ATAD2_PONPY (Q5RDX4) ATPase family AAA domain-containing protein 2|
          Length = 1091

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 52/149 (34%), Positives = 88/149 (59%), Gaps = 4/149 (2%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDG 233
           SKW GE E+ +R LF  A ++ P+IIF DE+D +   R+   + +    I +  ++  DG
Sbjct: 334 SKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLAPVRS-SRQDQIHSSIVSTLLALMDG 392

Query: 234 ILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKVDK 407
           + S+    I+V+ ATNR   +D A+ R  RF+R  +  LP +E+R+ IL+ + +++   K
Sbjct: 393 LDSRG--EIVVIGATNRLDAIDPALRRPGRFDREFLFSLPDKEARKEILK-IHTRDWNPK 449

Query: 408 DIE--YKELATMTEGYSGSDLKNLCVTAA 488
            ++   +ELA    GY G+D+K++C  AA
Sbjct: 450 PLDTFLEELAENCVGYRGADIKSICAEAA 478

---

>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A +AG  F  +S S     + G   K +R LF+ A   AP IIF+DE+D++ G+R    +
Sbjct: 335 AGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELDAIGGKRNPKDQ 394

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
             A + + N+ +   DG    SG  I+++ ATN P  LD+A+ R  RF++ + V LP   
Sbjct: 395 AYAKQTL-NQLLVELDGFSQTSG--IIIIGATNFPEALDKALTRPGRFDKVVNVDLPDVR 451

Query: 357 SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            R  IL+  + K  +  +++   +A  T G SG++L NL   AA
Sbjct: 452 GRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQAA 495

---

>PEX6_MOUSE (Q99LC9) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 981

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F++V    + + + G+ E+NVR +F+ A   AP IIF DE+DS+   R R G+
Sbjct: 759  ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGD 818

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
                M ++ ++ ++  DG+   S + + V+ ATNRP  LD A++R  RF++ + VG    
Sbjct: 819  SGGVMDRVVSQLLAELDGL--HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 876

Query: 354  ESREL-ILRTVLSKEKVDKDIEYKE-LATMTEGYSGSDLKNLCVTA 485
             + +L +L  +  K K++  +     L       +G+DL +LC  A
Sbjct: 877  RASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCSDA 922

---

>PRS6B_YEAST (P33298) 26S protease regulatory subunit 6B homolog (YNT1 protein)|
           (TAT-binding homolog 2)
          Length = 428

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+FI V+ S    K+ GE  + VR +F LA + AP+IIF+DEVDS+  +R  A+ 
Sbjct: 227 ANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQT 286

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRI-MVGLP 347
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I    L 
Sbjct: 287 GSDREVQRILIELLTQMDGF--DQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLR 344

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            +  R LI  T+ SK  +  + +   L    +  SG+ +  +   A  R V
Sbjct: 345 DRRERRLIFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAV 395

---

>PRS4_YEAST (P40327) 26S protease regulatory subunit 4 homolog (TAT-binding|
           homolog 5)
          Length = 437

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 47/165 (28%), Positives = 90/165 (54%), Gaps = 4/165 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+F+ +  S +  K+ G+  +  R +F +A + AP+I+F+DE+D++  +R  +  
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKRYDSNS 296

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++   E ++  DG   +    + V+ ATN+   LD A+IR  R +R+I+   P 
Sbjct: 297 GGEREIQRTMLELLNQLDGFDDRGD--VKVIMATNKIETLDPALIRPGRIDRKILFENPD 354

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             +++ IL    SK  + +D+  + L T  +  SG+D++ +C  A
Sbjct: 355 LSTKKKILGIHTSKMNLSEDVNLETLVTTKDDLSGADIQAMCTEA 399

---

>PEX6_RAT (P54777) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 978

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F++V    + + + G+ E+NVR +F+ A   AP IIF DE+DS+   R R G+
Sbjct: 756  ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGD 815

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
                M ++ ++ ++  DG+   S + + V+ ATNRP  LD A++R  RF++ + VG    
Sbjct: 816  SGGVMDRVVSQLLAELDGL--HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGASED 873

Query: 354  ESREL-ILRTVLSKEKVDKDIEYKE-LATMTEGYSGSDLKNLCVTA 485
             + +L +L  +  K K++  +     L       +G+DL +LC  A
Sbjct: 874  RASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCSDA 919

---

>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---AR 173
           AN   A+FI V  S +  K+ GE  + VR LF +A      IIF DE+D++ G R     
Sbjct: 264 ANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGARFDDGA 323

Query: 174 CGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
            G++E  R +  E ++  DG   +    I V+ ATNRP  LD A++R  R +R++   LP
Sbjct: 324 GGDNEVQRTML-ELITQLDGFDPRG--NIKVMFATNRPNTLDPALLRPGRIDRKVEFSLP 380

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
             E R  I R       V++ I ++ ++ +    +G++L+++C  A
Sbjct: 381 DLEGRANIFRIHSKSMSVERGIRWELISRLCPNSTGAELRSVCTEA 426

---

>PRS6B_SOLTU (P54778) 26S protease regulatory subunit 6B homolog|
          Length = 413

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 50/170 (29%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           A+   A+FI V  S    K+ GE  + VR +F LA + AP IIF+DEVD++   R  A+ 
Sbjct: 215 AHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 274

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G    +++I  E ++  DG        + V+ ATNR   LD A++R  R +R+I   LP 
Sbjct: 275 GADREVQRILMELLNQMDGF--DQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 332

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
           +  + L+ +   +K  +  +++ ++  +  +  S +++  +C  A    V
Sbjct: 333 RRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAV 382

---

>ATAD2_MOUSE (Q8CDM1) ATPase family AAA domain-containing protein 2|
          Length = 1040

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 52/149 (34%), Positives = 86/149 (57%), Gaps = 4/149 (2%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDG 233
           SKW GE E+ +R LF  A ++ P IIF DE+D +   R+   + +    I +  ++  DG
Sbjct: 158 SKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLAPVRS-SRQDQIHSSIVSTLLALMDG 216

Query: 234 ILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKVDK 407
           + S+    I+V+ ATNR   +D A+ R  RF+R  +  LP + +R+ IL+ + +++   K
Sbjct: 217 LDSRG--EIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKNARKEILK-IHTRDWNPK 273

Query: 408 --DIEYKELATMTEGYSGSDLKNLCVTAA 488
             D+  +ELA    GY G+D+K++C  AA
Sbjct: 274 PVDMFLEELAEHCVGYCGADIKSICAEAA 302

---

>PEX6_HUMAN (Q13608) Peroxisome assembly factor 2 (PAF-2) (Peroxisomal-type|
            ATPase 1) (Peroxin-6) (Peroxisomal biogenesis factor 6)
          Length = 980

 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F++V    + + + G+ E+NVR +F+ A   AP IIF DE+DS+   R R G+
Sbjct: 758  ATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGD 817

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
                M ++ ++ ++  DG+   S + + V+ ATNRP  LD A++R  RF++ + VG    
Sbjct: 818  SGGVMDRVVSQLLAELDGL--HSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANED 875

Query: 354  ESREL-ILRTVLSKEKVDKDIE-YKELATMTEGYSGSDLKNLCVTA 485
             + +L +L  +  K K++  +     L       +G+DL +LC  A
Sbjct: 876  RASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDA 921

---

>PRS2_METTH (O27092) Putative 26S protease regulatory subunit homolog MTH1011|
          Length = 372

 Score = 79.3 bits (194), Expect = 7e-15
 Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+       +  +++  +  G+  + +  L+ LA+K AP++IF+DE+D++   R     
Sbjct: 178 ANELKVPLYLIKATSLIGEHVGDGARQIHELYELASKTAPSVIFIDEMDAIGLDRRYQSL 237

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
              + ++ N  ++  DGI    G  ++ + ATN P  LD+AI  RFE  I   LP  E R
Sbjct: 238 RGDVSEVVNALLTEMDGINQNWG--VVTIGATNNPELLDKAIRSRFEEEIEFKLPDDEER 295

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKN-LCVTAAYRPV 500
           +L+L   +    +  D    +L  +T   SG D+K+ +  TA +R +
Sbjct: 296 KLMLEKYIETMPLKVDFPVDKLVKLTREMSGRDIKDRVLKTALHRAI 342

---

>PEX6_DEBHA (Q6BS73) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1198

 Score = 78.6 bits (192), Expect = 1e-14
 Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P +IF DE+DS+  +R   G+
Sbjct: 893  ATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRGNQGD 952

Query: 183  H-EAMRKIKNEFMSHWDGI---LSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                M +I ++ ++  DG+       G+ + V+ ATNRP  LDEA++R  RF++ + +G+
Sbjct: 953  SGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGI 1012

Query: 345  -PTQESRELILRTVLSKEKVDKDIEYKELATMTE-GYSGSDLKNLC 476
              T E +  IL  +  K K+  +++  E+A      ++G+D   LC
Sbjct: 1013 SDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFTGADFYALC 1058

---

>TBP7_CAEEL (P54816) TAT-binding homolog 7|
          Length = 1242

 Score = 78.2 bits (191), Expect = 2e-14
 Identities = 56/148 (37%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDG 233
           SKW GE E+ +R LF  A  + P+IIF DE+D +   R+   + +    I +  ++  DG
Sbjct: 468 SKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVRS-SKQDQIHASIVSTLLALMDG 526

Query: 234 ILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKVDK 407
            L   GE ++V+ ATNR   LD A+ R  RF+R +   LP   +R  IL    SK + +K
Sbjct: 527 -LDGRGE-VVVIGATNRLDTLDPALRRPGRFDRELRFSLPDLNARRQILDIHTSKWEENK 584

Query: 408 DI--EYKELATMTEGYSGSDLKNLCVTA 485
            I      +A  T GY G+DLK LC  A
Sbjct: 585 PIPETLDAIAERTSGYCGADLKFLCTEA 612

---

>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 76.6 bits (187), Expect = 5e-14
 Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
 Frame = +3

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPT 350
           G H+   +  N+ +   DG     G  ++V+AATNRP  LD A+ R  RF+R+++VGLP 
Sbjct: 11  GGHDEREQTLNQMLVEMDGFSGNDG--VIVIAATNRPDVLDPALTRPGRFDRQVVVGLPD 68

Query: 351 QESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
            + RE IL+  + K  V +D++   LA  T GYSG+DL NL   AA
Sbjct: 69  VKGREQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAA 114

---

>PEX1_HUMAN (O43933) Peroxisome biogenesis factor 1 (Peroxin-1) (Peroxisome|
            biogenesis disorder protein 1)
          Length = 1283

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A ++  +FI+V    + SK+ G  E+ VR +F  A    P I+F DE +S+  +R     
Sbjct: 895  ARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNT 954

Query: 183  HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                R + N+ ++  DG+    G  + VLAAT+RP  +D A++R  R ++ +    P Q 
Sbjct: 955  GVTDRVV-NQLLTQLDGVEGLQG--VYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQV 1011

Query: 357  SRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
            SR  IL  +     +  D++ + +A++T+ ++G+DLK L   A
Sbjct: 1012 SRLEILNVLSDSLPLADDVDLQHVASVTDSFTGADLKALLYNA 1054

---

>PEX6_PICPA (P33289) Peroxisomal biogenesis factor 6 (Peroxin-6) (Peroxisome|
            biosynthesis protein PAS5)
          Length = 1165

 Score = 76.3 bits (186), Expect = 6e-14
 Identities = 49/167 (29%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P ++F DE+DS+  +R   G+
Sbjct: 873  ATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDAKPCVVFFDELDSVAPKRGNQGD 932

Query: 183  HE-AMRKIKNEFMSHWDGIL-SKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL-P 347
             E  M +I ++ ++  DG+     G+ + V+ ATNRP  LDEA++R  RF++ + +G+  
Sbjct: 933  SEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPDLLDEALLRPGRFDKMLYLGVSD 992

Query: 348  TQESRELILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTA 485
            T E +  I+  +  K  +   ++  ++A +    ++G+D   LC  A
Sbjct: 993  THEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGADFYALCSDA 1039



 Score = 37.4 bits (85), Expect = 0.032
 Identities = 27/109 (24%), Positives = 57/109 (52%)
 Frame = +3

Query: 120 PTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLD 299
           P I+F+  ++++  +  +  +     KI NE +   D   +K G  +L +A+TN   +L 
Sbjct: 625 PLIVFIKHIEALTKKSEQQQKDSLAVKI-NELI---DEYTAKPG--VLFVASTNDSDNLS 678

Query: 300 EAIIRRFERRIMVGLPTQESRELILRTVLSKEKVDKDIEYKELATMTEG 446
           + +  +F+  I++G+P+++ R LI + ++       D + K    +TEG
Sbjct: 679 DELRAKFKFEIVLGVPSEQERTLIFKYLI-------DFDQKTTPKVTEG 720

---

>PRS6B_SCHPO (O74894) 26S protease regulatory subunit 6B homolog|
          Length = 389

 Score = 75.9 bits (185), Expect = 8e-14
 Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 5/159 (3%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR--ARC 176
           AN   A+FI V  S    K+ GE  + VR +F +A + AP IIF+DE+D++  +R  A+ 
Sbjct: 189 ANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQT 248

Query: 177 GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRI-MVGLP 347
           G    +++I  E ++  DG     G  + V+ ATNR   LD A++R  R +R+I      
Sbjct: 249 GADREVQRILIELLTQMDGF--DQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYR 306

Query: 348 TQESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDL 464
            +  R L+ +T+ +K  +  +++        +  SG+ +
Sbjct: 307 DRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQI 345

---

>PR6AA_XENLA (O42587) 26S protease regulatory subunit 6A-A (TAT-binding protein|
           6) (TBP-6)
          Length = 405

 Score = 75.1 bits (183), Expect = 1e-13
 Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 5/143 (3%)
 Frame = +3

Query: 18  ASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQR---ARCGEHE 188
           A+F+ ++   +   + G+  K VR  F+LA + AP+IIF+DE+D++  +R    + G+ E
Sbjct: 230 ATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDRE 289

Query: 189 AMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESR 362
             R +  E ++  DG   +   ++ V+AATNR   LD A++R  R +R+I   +P +E+R
Sbjct: 290 VQRTML-ELLNQLDGF--QPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEAR 346

Query: 363 ELILRTVLSKEKVDKDIEYKELA 431
             I++    K  V  D+ Y+ELA
Sbjct: 347 ARIMQIHSRKMNVSPDVNYEELA 369

---

>NSF_MOUSE (P46460) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein) (SKD2 protein)
          Length = 744

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 15/157 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFS--------LAAKVAPTIIFVDEVDSMLGQR-ARCGEHEAMRK 200
           I +K+ GE E N+R LF+        L A     II  DE+D++  QR +  G       
Sbjct: 290 ILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT 349

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ +S  DG+  +    ILV+  TNRP  +DEA++R  R E ++ +GLP ++ R  IL
Sbjct: 350 VVNQLLSKIDGV--EQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407

Query: 375 RTVLSKEK----VDKDIEYKELATMTEGYSGSDLKNL 473
               ++ +    +  D++ KELA  T+ +SG++L+ L
Sbjct: 408 HIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444

---

>NSF_HUMAN (P46459) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 15/157 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFS--------LAAKVAPTIIFVDEVDSMLGQR-ARCGEHEAMRK 200
           I +K+ GE E N+R LF+        L A     II  DE+D++  QR +  G       
Sbjct: 290 ILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT 349

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ +S  DG+  +    ILV+  TNRP  +DEA++R  R E ++ +GLP ++ R  IL
Sbjct: 350 VVNQLLSKIDGV--EQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407

Query: 375 RTVLSKEK----VDKDIEYKELATMTEGYSGSDLKNL 473
               ++ +    +  D++ KELA  T+ +SG++L+ L
Sbjct: 408 HIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444

---

>NSF_CRIGR (P18708) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 744

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 52/157 (33%), Positives = 85/157 (54%), Gaps = 15/157 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFS--------LAAKVAPTIIFVDEVDSMLGQR-ARCGEHEAMRK 200
           I +K+ GE E N+R LF+        L A     II  DE+D++  QR +  G       
Sbjct: 290 ILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDT 349

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ +S  DG+  +    ILV+  TNRP  +DEA++R  R E ++ +GLP ++ R  IL
Sbjct: 350 VVNQLLSKIDGV--EQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEKGRLQIL 407

Query: 375 RTVLSKEK----VDKDIEYKELATMTEGYSGSDLKNL 473
               ++ +    +  D++ KELA  T+ +SG++L+ L
Sbjct: 408 HIHTARMRGHQLLSADVDIKELAVETKNFSGAELEGL 444

---

>PEX6_PENCH (Q9HG03) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1459

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 51/175 (29%), Positives = 89/175 (50%), Gaps = 9/175 (5%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P ++F DE+DS+  +R   G+
Sbjct: 1084 ATEFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGD 1143

Query: 183  H-EAMRKIKNEFMSHWDGILSKSGER----ILVLAATNRPFDLDEAIIR--RFERRIMVG 341
                M +I ++ ++  DG+    GE     + V+ ATNRP  LD A++R  RF++ + +G
Sbjct: 1144 SGGVMDRIVSQLLAELDGM--NGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLG 1201

Query: 342  L-PTQESRELILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTAAYRPV 500
            +  T   +  IL  +  K  +  D+    +A  +   Y+G+DL  LC  A  + +
Sbjct: 1202 VSDTHRKQATILEALTRKFALHPDVSLDRVAEQLPLTYTGADLYALCSDAMLKAI 1256

---

>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P ++F DE+DS+  +R   G+
Sbjct: 1045 ATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGD 1104

Query: 183  H-EAMRKIKNEFMSHWDGIL--SKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL- 344
                M +I ++ ++  DG+      G  + V+ ATNRP  LD A++R  RF++ + +G+ 
Sbjct: 1105 SGGVMDRIVSQLLAELDGMSGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVS 1164

Query: 345  PTQESRELILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTAAYRPV 500
             T + +  I+  +  K  +   +  + +A  +   Y+G+D   LC  A  + V
Sbjct: 1165 DTHDKQVTIMEALTRKFTLHPTVSLRSVAERLPFTYTGADFYALCSDAMLKAV 1217

---

>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 51/169 (30%), Positives = 89/169 (52%), Gaps = 7/169 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-- 176
           A +A   F+ ++         G     VR+LF  A   AP I+++DE+D++  +R+    
Sbjct: 363 ATEAQVPFLAMAGPEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKKRSTTMS 422

Query: 177 -GEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
              +    +  N+ +   DG+   + + ++VLA+TNR   LD A++R  R +R + + LP
Sbjct: 423 GFSNTEEEQTLNQLLVEMDGM--GTTDHVIVLASTNRADILDGALMRPGRLDRHVFIDLP 480

Query: 348 T-QESRELILRTVLSKEKVDKDIEYKE-LATMTEGYSGSDLKNLCVTAA 488
           T QE RE+  + + S +       Y + LA +T G+SG+D+ N+C  AA
Sbjct: 481 TLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNEAA 529

---

>NSF1_DROME (P46461) Vesicular-fusion protein Nsf1 (N-ethylmaleimide-sensitive|
           fusion protein 1) (NEM-sensitive fusion protein 1)
           (dNsf-1) (Protein comatose)
          Length = 745

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 49/157 (31%), Positives = 85/157 (54%), Gaps = 15/157 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLAA----KVAPT----IIFVDEVDSMLGQRARCGEHEAMRK- 200
           I  K+ GE E NVR LF+ A     ++ P     II  DE+D++  QR     +  +   
Sbjct: 290 ILDKYVGESEANVRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHDT 349

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ ++  DG+   +   ILV+  TNR   +DEA++R  R E ++ + LP ++ R  IL
Sbjct: 350 VVNQLLTKIDGVDQLNN--ILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQIL 407

Query: 375 RTVLSK----EKVDKDIEYKELATMTEGYSGSDLKNL 473
                +     K++ D++ KE+A +T+ +SG++L+ L
Sbjct: 408 NIHTKRMREFNKINDDVDNKEIAALTKNFSGAELEGL 444

---

>PEX6_GLOLA (Q9C1E9) Peroxisomal biogenesis factor 6 (Peroxin-6) (ClaPEX6)|
          Length = 1388

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 48/173 (27%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
 Frame = +3

Query: 3    ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
            A +   +F +V    + + + GE E NVR +F  A    P ++F DE+DS+  +R   G+
Sbjct: 1048 ATEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGD 1107

Query: 183  H-EAMRKIKNEFMSHWDGIL--SKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLP 347
                M +I ++ ++  DG+     +   + V+ ATNRP  LD A++R  RF++ + +G+ 
Sbjct: 1108 SGGVMDRIVSQLLAELDGMSGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVS 1167

Query: 348  TQESREL-ILRTVLSKEKVDKDIEYKELA-TMTEGYSGSDLKNLCVTAAYRPV 500
                ++L IL  +  K  +   +    +A  +   Y+G+D   LC  A  + V
Sbjct: 1168 DTHDKQLKILEALTRKFTLHPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAV 1220



 Score = 30.4 bits (67), Expect = 3.9
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 264  VLAATNRPFD-LDEAIIRRFERRIMVGLPTQESRELILRTVLSKE--KVDKDIEYKELAT 434
            VL AT    D + + +   F   + VG P +  RE ILRT++      +D +++   +A 
Sbjct: 852  VLVATTSDVDKVPDGVRGLFSHELEVGAPDEAEREGILRTIVEDRGINLDPEVDLNGIAL 911

Query: 435  MTEGYSGSDL 464
             T      DL
Sbjct: 912  KTAALVAGDL 921

---

>NSF_ARATH (Q9M0Y8) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
          Length = 742

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLAAKVAPT--------IIFVDEVDSMLGQRARCGEHEAMR-K 200
           + SK+ GE EKNVR LF+ A +   T        +I  DE+D++   R    +   +   
Sbjct: 287 VLSKFVGETEKNVRDLFADAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDS 346

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           I N+ ++  DG+  ++   +L++  TNR   LDEA++R  R E ++ + LP +  R  IL
Sbjct: 347 IVNQLLTKIDGV--EALNNVLLIGMTNRKDLLDEALLRPGRLEVQVEISLPDEAGRLQIL 404

Query: 375 RTVLSKEKVDK----DIEYKELATMTEGYSGSDLKNLCVTA 485
           +   +K K +     DI  +ELA  T+ YSG++L+ +  +A
Sbjct: 405 QIHTNKMKENSFLGTDINLQELAARTKNYSGAELEGVVKSA 445

---

>NSF_CAEEL (Q94392) Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion|
           protein NSF) (N-ethylmaleimide sensitive fusion protein)
           (NEM-sensitive fusion protein)
          Length = 824

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 49/157 (31%), Positives = 83/157 (52%), Gaps = 15/157 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLA--------AKVAPTIIFVDEVDSMLGQR-ARCGEHEAMRK 200
           I  K+ GE E NVR LF+ A        A     II  DE+D++  QR +  G       
Sbjct: 367 ILDKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHDT 426

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ +S  DG+  +    ILV+  TNR   +DEA++R  R E ++ V LP +  R  IL
Sbjct: 427 VVNQLLSKMDGV--EQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEVSLPDETGRLQIL 484

Query: 375 RTVLSK----EKVDKDIEYKELATMTEGYSGSDLKNL 473
           +   ++     K+D +++ ++++  T+ +SG++L+ L
Sbjct: 485 KIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGL 521

---

>Y4KL_RHISN (P55530) Hypothetical 37.6 kDa AAA-family ATPase y4kL|
          Length = 330

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 45/161 (27%), Positives = 72/161 (44%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           A + G     V +  + S + GE   N+R  F  A K  P ++F DE D++   R   GE
Sbjct: 139 AAELGLPLFRVKLDRLISSYLGETATNIRKTFEFARK-QPCVLFFDEFDALARTRDDSGE 197

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESR 362
           H  +R++ N  +   D +  K      ++AATN    LD AI RRF+  +    P     
Sbjct: 198 HNELRRVVNSLLLFIDNMQPKG----FLIAATNLDRSLDAAIWRRFDEVLWFDRPEAAMI 253

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
              L+  L  + V    +    +   EGYS ++++ +C  A
Sbjct: 254 GRFLK--LKFKNVPVAFDPARNSAALEGYSFAEIERVCTQA 292

---

>SEC18_SCHPO (Q9P7Q4) Vesicular-fusion protein SEC18 homolog|
          Length = 792

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 47/162 (29%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLAAKVAPT--------IIFVDEVDSMLGQRARCGEHEAMR-K 200
           I +K+ G+ E+NVR LF+ A +            II  DE+D++  +R   G    +  +
Sbjct: 341 ILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKRGSSGGDTGVGDQ 400

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ ++  DG+   +   ILV+  TNR   +DEA++R  R E  + + LP +  R  IL
Sbjct: 401 VVNQLLAKMDGVDQLNN--ILVIGMTNRKDMIDEALLRPGRLEVHMEISLPDEHGRLQIL 458

Query: 375 RTVLSKEK----VDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           +   S+      ++ D++ +ELA++T+ +SG+++  L  +A+
Sbjct: 459 KIHTSRMASNGILENDVDMEELASLTKNFSGAEIAGLIKSAS 500

---

>NSF2_DROME (P54351) Vesicular-fusion protein Nsf2 (N-ethylmaleimide-sensitive|
           fusion protein 2) (NEM-sensitive fusion protein 2)
           (dNsf-2)
          Length = 752

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 46/157 (29%), Positives = 82/157 (52%), Gaps = 15/157 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLAA----KVAPT----IIFVDEVDSMLGQRARCGEHEAMRK- 200
           I  K+ GE E N+R LF+ A     ++ P     II  DE+D++   R     +  +   
Sbjct: 295 ILDKYVGESEANIRRLFAEAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHDT 354

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ ++  DG+  +    ILV+  TNR   +DEA++R  R E ++ + LP ++ R  IL
Sbjct: 355 VVNQLLAKIDGV--EQLNNILVIGMTNRRDMIDEALLRPGRLEVQMEISLPNEQGRVQIL 412

Query: 375 ----RTVLSKEKVDKDIEYKELATMTEGYSGSDLKNL 473
               + +    K+  D++  E+A  T+ +SG++L+ L
Sbjct: 413 NIHTKRMRDFNKIASDVDNNEIAAKTKNFSGAELEGL 449

---

>SEC18_YEAST (P18759) Vesicular-fusion protein SEC18|
          Length = 758

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 46/162 (28%), Positives = 85/162 (52%), Gaps = 15/162 (9%)
 Frame = +3

Query: 48  ITSKWFGEDEKNVRALFSLAA--------KVAPTIIFVDEVDSMLGQRARCGEHEAMR-K 200
           I SK+ G  E+N+R LF  A         + +  II  DE+DS+  QR   G+   +   
Sbjct: 311 ILSKYVGSSEENIRNLFKDAEAEYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGVGDN 370

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESR---- 362
           + N+ ++  DG+   +   ILV+  TNR   +D A++R  RFE ++ + LP ++ R    
Sbjct: 371 VVNQLLAKMDGVDQLNN--ILVIGMTNRKDLIDSALLRPGRFEVQVEIHLPDEKGRLQIF 428

Query: 363 ELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAA 488
           ++  + +     +  D+   ELA +T+ +SG++++ L  +A+
Sbjct: 429 DIQTKKMRENNMMSDDVNLAELAALTKNFSGAEIEGLVKSAS 470

---

>SEC18_CANAL (P34732) Vesicular-fusion protein SEC18|
          Length = 794

 Score = 63.2 bits (152), Expect = 5e-10
 Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 17/161 (10%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPT--------IIFVDEVDSMLGQRARCGEHEAMR---K 200
           SK+ G  E+N+R LF  A              +I  DE+DS+  QR   G+ +       
Sbjct: 349 SKYVGASEENIRNLFKDAEAEYKLKGEDSDLHVIIFDELDSVFKQRGS-GKSDGTGVGDN 407

Query: 201 IKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELIL 374
           + N+ +S  DG+   +   ILV+  TNR   +D A++R  RFE +I + LP ++ R+ I 
Sbjct: 408 VVNQLLSKMDGVDQLNN--ILVIGMTNRLDLIDTALLRPGRFEIQIEISLPDEKGRKDIF 465

Query: 375 ----RTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTA 485
               + +     +  D+ + EL+T+T+ ++G++++ LC +A
Sbjct: 466 LIHTKKLTENGILSSDVNFDELSTLTKNFTGAEIEGLCNSA 506

---

>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
 Frame = +3

Query: 66  GEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWDGILSK 245
           GE E  +R +  +A  ++P I+++DE+D         G+     ++   F+S W   LS+
Sbjct: 301 GESESRLRQMIDVAETLSPCILWIDEMDKAFSNNDSRGDSGTSNRVLATFIS-W---LSE 356

Query: 246 SGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKVD--KDI 413
             + + V+A  N    L   IIR  RF+    + LP  E R+ I +  + + + +  K  
Sbjct: 357 KTKPVFVVATANNVDLLPLEIIRKGRFDEIFFLDLPELEERKEIFKIHIQEFRPNSWKLF 416

Query: 414 EYKELATMTEGYSGSDLKNLCVTAAYR 494
           +YK+LA ++E +SG++++   + A Y+
Sbjct: 417 DYKKLAQLSESFSGAEIRQSIIEAMYQ 443

---

>Y2139_MYCBO (P63346) Putative AAA-family ATPase Mb2139c|
          Length = 609

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVA----PTIIFVDEVDSMLGQRA 170
           A++A + F+N+    + +K+ GE E+++R +F  A + A    P I+F DE+DS+   R 
Sbjct: 322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRG 381

Query: 171 RCGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                +    +  + +S  DG+  +  E ++V+ A+NR   +D AI+R  R + +I +  
Sbjct: 382 TGVSSDVETTVVPQLLSEIDGV--EGLENVIVIGASNREDMIDPAILRPGRLDVKIKIER 439

Query: 345 PTQESRELILRTVLSK 392
           P  E+ + I    L++
Sbjct: 440 PDAEAAQDIYSKYLTE 455

---

>Y2115_MYCTU (P63345) Putative AAA-family ATPase Rv2115c/MT2175|
          Length = 609

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 38/136 (27%), Positives = 73/136 (53%), Gaps = 6/136 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVA----PTIIFVDEVDSMLGQRA 170
           A++A + F+N+    + +K+ GE E+++R +F  A + A    P I+F DE+DS+   R 
Sbjct: 322 AHEAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRG 381

Query: 171 RCGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                +    +  + +S  DG+  +  E ++V+ A+NR   +D AI+R  R + +I +  
Sbjct: 382 TGVSSDVETTVVPQLLSEIDGV--EGLENVIVIGASNREDMIDPAILRPGRLDVKIKIER 439

Query: 345 PTQESRELILRTVLSK 392
           P  E+ + I    L++
Sbjct: 440 PDAEAAQDIYSKYLTE 455

---

>Y1316_MYCLE (P46509) Putative AAA-family ATPase ML1316|
          Length = 609

 Score = 58.9 bits (141), Expect = 1e-08
 Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVA----PTIIFVDEVDSMLGQRA 170
           A +A + F+N+    + +K+ GE E+++R +F  A + A    P I+F DE+DS+   R 
Sbjct: 322 AREAKSYFLNIKGPELLNKFVGETERHIRLIFQRAREKASEGTPVIVFFDEMDSIFRTRG 381

Query: 171 RCGEHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGL 344
                +    +  + +S  DG+  +  E ++V+ A+NR   +D AI+R  R + +I +  
Sbjct: 382 TGVSSDVETTVVPQLLSEIDGV--EGLENVIVIGASNREDMIDPAILRPGRLDVKIKIER 439

Query: 345 PTQESRELILRTVLSK 392
           P  E+ + I    L++
Sbjct: 440 PDAEAAQDIYSKYLTE 455

---

>YCF46_PORPU (P51189) Hypothetical 56.0 kDa protein ycf46 (ORF491)|
          Length = 491

 Score = 57.0 bits (136), Expect = 4e-08
 Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AND     + + +  +     GE E  +R + ++A  ++P ++++DE+D         G+
Sbjct: 280 ANDWTLPLLRLDIGKLFGGLVGESESRMREMVTIAEGLSPCVLWIDEIDKAFSNLYSQGD 339

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
                ++   F++ W   LS+    + V+A  N   +L   ++R  RF+    + LP  E
Sbjct: 340 SGTSARVFGTFIT-W---LSEKTTPVFVVATANTIQNLPSEMLRKGRFDEIFFLDLPNNE 395

Query: 357 SRELILRTVLS--KEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAY 491
            RELI +  L+  + K  ++   K+L+ +   +SG++++   V + +
Sbjct: 396 ERELIFQIHLARIRPKSWQNYNIKQLSLLCNKFSGAEIEQAIVESMH 442

---

>YCF2_MESVI (Q9MUP8) Protein ycf2 (RF2)|
          Length = 890

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 23/178 (12%)
 Frame = +3

Query: 9   DAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEH- 185
           +A   ++ V  S    +  G     V  LF     ++P I+++DE+DS+  +R    +  
Sbjct: 401 EAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQL 460

Query: 186 EAMRKIKN-------------------EFMSHWDGILSKSGERILVLAATNRPFDLDEAI 308
           E ++ I +                   +F+ + DG   K    ++++ ATNR   LD+AI
Sbjct: 461 EQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGY--KKRNDLIIIGATNRIETLDDAI 518

Query: 309 IR--RFERRIMVGLPTQESRELILRTVLSKEKVDKDIEYKE-LATMTEGYSGSDLKNL 473
           +R  RF+R+I+   P  E R+ ILR  L   K   D   K  +A  + G +G DL+ L
Sbjct: 519 MRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMMAERSIGLNGCDLRLL 576

---

>YCF46_GUITH (O78439) Hypothetical 57.8 kDa protein ycf46|
          Length = 506

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 36/159 (22%), Positives = 72/159 (45%), Gaps = 4/159 (2%)
 Frame = +3

Query: 3   ANDAGASFINVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGE 182
           AN+     + + +  +     GE E  VR +   A  ++P I+++DE+D          +
Sbjct: 296 ANEWNLPLLKLDVGRLFGGIIGESEARVRQMIQFAETISPCILWIDEIDKAFTGSNFNND 355

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQE 356
               +++   F++ W   LS+    + V+A  N    L   ++R  RF+    +GLP  +
Sbjct: 356 SGTTKRVFGTFIT-W---LSEKKSPVFVVATANNIDSLPPELLRKGRFDEVFFIGLPDLK 411

Query: 357 SRELILRTVLSK--EKVDKDIEYKELATMTEGYSGSDLK 467
            RE I +  L K   K     + + L+  +  +SG++++
Sbjct: 412 ERECIFKVHLKKIRPKSWSTYDTEILSAQSNRFSGAEIE 450

---

>FTSH_CHLVU (P56369) Cell division protein ftsH homolog|
          Length = 1720

 Score = 50.4 bits (119), Expect = 4e-06
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
 Frame = +3

Query: 180  EHEAMRKIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQ 353
            ++E    + ++ +   DGI  ++G  +++  ATNRP  LD A++R  RF++ + VGLP Q
Sbjct: 1147 QNEKQVSLLSQLLIELDGIQGRNG--VVIFGATNRPEVLDPALLRPGRFDKIVKVGLPAQ 1204

Query: 354  ESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRPV 500
            + R  IL+         K + +      T G++ +DL  L   +A + +
Sbjct: 1205 KKRVEILQFYGQTLGYQKTMPWAYFGERTVGFTAADLATLMNESALKAI 1253



 Score = 29.6 bits (65), Expect = 6.7
 Identities = 10/30 (33%), Positives = 23/30 (76%)
 Frame = +3

Query: 84   VRALFSLAAKVAPTIIFVDEVDSMLGQRAR 173
            ++ +F  A ++AP I+F+DE+D++  +R++
Sbjct: 1054 LQLVFQEARQLAPCIVFIDEIDTLSSKRSQ 1083

---

>PCH2_YEAST (P38126) Pachytene checkpoint protein 2|
          Length = 536

 Score = 45.8 bits (107), Expect = 9e-05
 Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
 Frame = +3

Query: 27  INVSMSTITSKWFGEDEKNVRALFSLAAKVAPT--------IIFVDEVDSMLGQRARCGE 182
           I +S + I SKWFGE  KN+  +F    ++            + +DEV+++   R     
Sbjct: 353 IELSCARIFSKWFGESSKNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSS 412

Query: 183 HEAMR---KIKNEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQ 353
                   ++ N  ++  D +  K     L LA +N    LD+A + R +    VG PT 
Sbjct: 413 RNESTDGIRVVNTLLTQLDRL--KKYHNFLALATSNLLDSLDDAFVDRADGVFYVGNPTA 470

Query: 354 ESRELILRTVLSK 392
           E    IL+  + +
Sbjct: 471 EGILHILKVCIEE 483

---

>AFG31_HUMAN (O43931) AFG3-like protein 1 (EC 3.4.24.-) (Fragment)|
          Length = 69

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
 Frame = +3

Query: 258 ILVLAATNRPFDLDEAIIR--RFERRIMVGLPTQESRELILRTVLSKEKVD----KDIEY 419
           ++VLA TNRP  LD A++R  RF R+I  G P  + R  I +  L   K+D    KD   
Sbjct: 1   VVVLAGTNRPDVLDPALMRPGRFHRQIYTGPPYIKGRSSIFKVHLRPLKLDKSLNKDTLA 60

Query: 420 KELATMTEG 446
           ++LA +T G
Sbjct: 61  RKLAVLTPG 69

---

>CLPB_RALSO (Q8XZR0) Chaperone clpB|
          Length = 862

 Score = 39.7 bits (91), Expect = 0.006
 Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+ + +A +   TI+F+DE+ +M+G     G  +A   +K        
Sbjct: 248 AKYRGEFEERLKAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPAL----- 302

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ +++V  P+ E+   ILR +  K +
Sbjct: 303 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVLVDEPSVEATIAILRGLQEKYE 357

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + ++L +  +T  + P
Sbjct: 358 LHHGVEITDPAIV----AAAELSHRYITDRFLP 386

---

>CLPB_CHRVO (Q7NWN7) Chaperone clpB|
          Length = 859

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+ + L+     T+IF+DE+ +++G     G  +A   +K        
Sbjct: 249 AKYRGEFEERLKAVLNDLSKDDGQTLIFIDEIHTLVGAGKADGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ +++VG P+ E    ILR +  K +
Sbjct: 304 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVLVGEPSVEDTIAILRGLQEKYE 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   ++  + A +    + ++L    +T  + P
Sbjct: 359 IHHGVDITDPAIV----AAAELSQRYITDRFLP 387

---

>CLPA_ECOLI (P0ABH9) ATP-dependent Clp protease ATP-binding subunit clpA|
          Length = 758

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-GEHEAMRKIKNEFMSHWD 230
           +K+ G+ EK  +AL     +   +I+F+DE+ +++G  A   G+ +A   IK        
Sbjct: 257 TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP------- 309

Query: 231 GILSKSGERILVLAAT-----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKE 395
             L  SG +I V+ +T     +  F+ D A+ RRF+ +I +  P+ E    I+  +  K 
Sbjct: 310 --LLSSG-KIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKPKY 365

Query: 396 KVDKDIEY 419
           +   D+ Y
Sbjct: 366 EAHHDVRY 373

---

>CLPA_ECOL6 (P0ABI0) ATP-dependent Clp protease ATP-binding subunit clpA|
          Length = 758

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-GEHEAMRKIKNEFMSHWD 230
           +K+ G+ EK  +AL     +   +I+F+DE+ +++G  A   G+ +A   IK        
Sbjct: 257 TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP------- 309

Query: 231 GILSKSGERILVLAAT-----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKE 395
             L  SG +I V+ +T     +  F+ D A+ RRF+ +I +  P+ E    I+  +  K 
Sbjct: 310 --LLSSG-KIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKPKY 365

Query: 396 KVDKDIEY 419
           +   D+ Y
Sbjct: 366 EAHHDVRY 373

---

>CLPA_ECO57 (P0ABI1) ATP-dependent Clp protease ATP-binding subunit clpA|
          Length = 758

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 35/128 (27%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARC-GEHEAMRKIKNEFMSHWD 230
           +K+ G+ EK  +AL     +   +I+F+DE+ +++G  A   G+ +A   IK        
Sbjct: 257 TKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKP------- 309

Query: 231 GILSKSGERILVLAAT-----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKE 395
             L  SG +I V+ +T     +  F+ D A+ RRF+ +I +  P+ E    I+  +  K 
Sbjct: 310 --LLSSG-KIRVIGSTTYQEFSNIFEKDRALARRFQ-KIDITEPSIEETVQIINGLKPKY 365

Query: 396 KVDKDIEY 419
           +   D+ Y
Sbjct: 366 EAHHDVRY 373

---

>CLPB_XANCP (Q8P6A0) Chaperone clpB|
          Length = 861

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+ S L+      I+F+DE+ +M+G     G  +A   +K        
Sbjct: 249 AKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ ++ VG PT E    ILR +  +  
Sbjct: 304 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVFVGEPTVEDTIAILRGLKERYA 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           V   +E  + A +    + + L N  +T    P
Sbjct: 359 VHHGVEITDPAIV----AAATLSNRYITDRQLP 387

---

>CLPB_XANAC (Q8PHQ4) Chaperone clpB|
          Length = 861

 Score = 38.9 bits (89), Expect = 0.011
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+ S L+      I+F+DE+ +M+G     G  +A   +K        
Sbjct: 249 AKFRGEFEERLKAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ ++ VG PT E    ILR +  +  
Sbjct: 304 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVFVGEPTVEDTIAILRGLKERYA 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           V   +E  + A +    + + L N  +T    P
Sbjct: 359 VHHGVEITDPAIV----AAATLSNRYITDRQLP 387

---

>CLPB_BORPA (Q7W9E6) Chaperone clpB|
          Length = 865

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+   LA      I+F+DE+ +M+G     G  +A   +K        
Sbjct: 248 AKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPAL----- 302

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ +++VG P  ES   ILR +  + +
Sbjct: 303 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVLVGEPDVESTIAILRGLQERYE 357

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + ++L +  +T  + P
Sbjct: 358 LHHGVEITDPAIV----AAAELSHRYITDRFLP 386

---

>CLPB_BORBR (Q7WHB6) Chaperone clpB|
          Length = 865

 Score = 38.5 bits (88), Expect = 0.014
 Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+   LA      I+F+DE+ +M+G     G  +A   +K        
Sbjct: 248 AKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPAL----- 302

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ +++VG P  ES   ILR +  + +
Sbjct: 303 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVLVGEPDVESTIAILRGLQERYE 357

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + ++L +  +T  + P
Sbjct: 358 LHHGVEITDPAIV----AAAELSHRYITDRFLP 386

---

>CLPB_PASMU (Q9CKC0) Chaperone clpB|
          Length = 855

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+ + L+ +    I+F+DE+ +M+G     G  +A   +K        
Sbjct: 248 AKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSL----- 302

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   V A T     +  + D A+ RRF+ ++ VG PT E    ILR +  + +
Sbjct: 303 ----ARGELHCVGATTLDEYRQYIEKDAALERRFQ-KVFVGEPTVEDTIAILRGLKERYE 357

Query: 399 VDKDIEYKELA 431
           +   ++  + A
Sbjct: 358 IHHHVQITDPA 368

---

>CLPB_CAMJE (Q9PI02) Chaperone clpB|
          Length = 857

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 33/135 (24%), Positives = 63/135 (46%)
 Frame = +3

Query: 27  INVSMSTITSKWFGEDEKNVRALFSLAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIK 206
           +++S     +K+ GE E  ++A+ +   K    I+F+DE+ +++G  A  G  +A   +K
Sbjct: 241 LDMSALIAGAKYRGEFEDRLKAVVNEVIKSENIILFIDEIHTIVGAGASEGSMDAANILK 300

Query: 207 NEFMSHWDGILSKSGERILVLAATNRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVL 386
                   G L   G     L    + F+ D A+ RRF+  + VG P+      +LR + 
Sbjct: 301 PALAR---GELHTIG--ATTLKEYRKYFEKDAALQRRFQ-PVNVGEPSVNEALAMLRGIK 354

Query: 387 SKEKVDKDIEYKELA 431
            K ++  ++   + A
Sbjct: 355 EKLEIHHNVTINDSA 369

---

>CLPB_NEIMB (Q9JYQ8) Chaperone clpB|
          Length = 859

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++ + + LA     T+IF+DE+ +++G     G  +A   +K        
Sbjct: 249 AKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ +++VG P+ E    ILR +  + +
Sbjct: 304 ----ARGELHCIGATTLDEYRQYIEKDAALERRFQ-KVLVGEPSVEDTIAILRGLQERYE 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   I+  + A +    + ++L +  +T  + P
Sbjct: 359 IHHGIDITDPAIV----AAAELSDRYITDRFLP 387

---

>CLPB_NEIMA (Q9JTP9) Chaperone clpB|
          Length = 859

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 36/153 (23%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++ + + LA     T+IF+DE+ +++G     G  +A   +K        
Sbjct: 249 AKYRGEFEERLKGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ +++VG P+ E    ILR +  + +
Sbjct: 304 ----ARGELHCIGATTLDEYRQYIEKDAALERRFQ-KVLVGEPSVEDTIAILRGLQERYE 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   I+  + A +    + ++L +  +T  + P
Sbjct: 359 IHHGIDITDPAIV----AAAELSDRYITDRFLP 387

---

>CLPB_BORPE (Q7VYV6) Chaperone clpB|
          Length = 865

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+   LA      I+F+DE+ +M G     G  +A   +K        
Sbjct: 248 AKFRGEFEERLKAVLKELAQDDGQNIVFIDELHTMAGAGKAEGAMDAGNMLKPALAR--- 304

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF++ ++VG P  ES   ILR +  + +
Sbjct: 305 ------GELHCIGATTLDEYRKYIEKDAALERRFQK-VLVGEPDVESTIAILRGLQERYE 357

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + ++L +  +T  + P
Sbjct: 358 LHHGVEITDPAIV----AAAELSHRYITDRFLP 386

---

>CLPB_NITEU (Q82SD8) Chaperone clpB|
          Length = 863

 Score = 37.7 bits (86), Expect = 0.024
 Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++A+   LA     TI+F+DE+ +M+G     G  +A   +K        
Sbjct: 249 AKYRGEFEERLKAVLKELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   V A T     +  + D A+ RRF+ +++V  P  E+   ILR +  K +
Sbjct: 304 ----ARGELHCVGATTLDEYRKYVEKDAALERRFQ-KVLVDEPGVEATIAILRGLQEKYE 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + ++L +  +T  + P
Sbjct: 359 LHHGVEITDPAIV----AAAELSHRYITDRFLP 387

---

>CLPB_XYLFA (Q9PGC1) Chaperone clpB|
          Length = 861

 Score = 37.4 bits (85), Expect = 0.032
 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++ + + LA      I+F+DE+ +M+G     G  +A   +K        
Sbjct: 249 AKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ ++ VG PT E    ILR +  K  
Sbjct: 304 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVFVGEPTVEDTIAILRGLKEKYA 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + + L N  +T    P
Sbjct: 359 LHHGVEITDPAIV----AAATLSNRYITDRQLP 387

---

>CLPB_XYLFT (Q87AX8) Chaperone clpB|
          Length = 861

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 39/153 (25%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
 Frame = +3

Query: 54  SKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEHEAMRKIKNEFMSHWD 230
           +K+ GE E+ ++ + + LA      I+F+DE+ +M+G     G  +A   +K        
Sbjct: 249 AKFRGEFEERLKGVLNDLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPAL----- 303

Query: 231 GILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQESRELILRTVLSKEK 398
                 GE   + A T     +  + D A+ RRF+ ++ VG PT E    ILR +  K  
Sbjct: 304 ----ARGELHCIGATTLDEYRKYIEKDAALERRFQ-KVFVGEPTVEDTIAILRGLKEKYA 358

Query: 399 VDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
           +   +E  + A +    + + L N  +T    P
Sbjct: 359 LHHGVEITDPAIV----AAATLSNRYITDRQLP 387

---

>CLPB_VIBPA (Q87S63) Chaperone clpB|
          Length = 857

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 7/146 (4%)
 Frame = +3

Query: 15  GASFINVSMSTITS--KWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGEH 185
           G   +++ M  + +  K+ GE E+ ++++ + LA +    I+F+DE+ +M+G     G  
Sbjct: 234 GRRVLSLDMGALVAGAKYRGEFEERLKSVLNELAKEEGNVILFIDELHTMVGAGKGEGSM 293

Query: 186 EAMRKIKNEFMSHWDGILSKSGERILVLAAT----NRPFDLDEAIIRRFERRIMVGLPTQ 353
           +A   +K              GE   V A T     +  + D A+ RRF+ +++V  PT 
Sbjct: 294 DAGNMLKPAL---------ARGELHCVGATTLDEYRQYIEKDAALERRFQ-KVLVDEPTV 343

Query: 354 ESRELILRTVLSKEKVDKDIEYKELA 431
           E    ILR +  + ++   +E  + A
Sbjct: 344 EDTVAILRGLKERYELHHHVEITDPA 369

---

>CLPB_WOLPM (Q73IE4) Chaperone clpB|
          Length = 853

 Score = 36.2 bits (82), Expect = 0.071
 Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 4/168 (2%)
 Frame = +3

Query: 6   NDAGASFINVSMSTITSKWFGEDEKNVRALFS-LAAKVAPTIIFVDEVDSMLGQRARCGE 182
           +DA    +++      +K+ GE E+ ++A+ + L+      I+F+DE+ +++G  A  G 
Sbjct: 235 HDAKVLALDLGALIAGTKFRGEFEERLKAVINELSRAEGKVILFIDELHTLVGAGATSGA 294

Query: 183 HEAMRKIKNEFMSHWDGILSKSGERIL---VLAATNRPFDLDEAIIRRFERRIMVGLPTQ 353
            +A   +K          L++   R +    L    +  + D A+ RRF+  + +  PT+
Sbjct: 295 MDASNLLK--------PALARGEVRCIGATTLDEYRQHIEKDPALARRFQ-PVFISQPTE 345

Query: 354 ESRELILRTVLSKEKVDKDIEYKELATMTEGYSGSDLKNLCVTAAYRP 497
                ILR +  + +V   I   + A +    + + L N  +T  + P
Sbjct: 346 TDTISILRGLKERYEVHHGIRITDGAII----AAATLSNRYITDRFLP 389


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,043,201
Number of Sequences: 219361
Number of extensions: 1484403
Number of successful extensions: 4927
Number of sequences better than 10.0: 328
Number of HSP's better than 10.0 without gapping: 4493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4646
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---