| Clone Name | basd14l19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_475967.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2568 Score = 527 bits (266), Expect = e-146 Identities = 446/506 (88%) Strand = Plus / Plus Query: 6 aatgatgccggtgccagcttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttc 65 ||||| || |||||||||||||||||||| || ||||| || ||||||||||| |||||| Sbjct: 1669 aatgacgctggtgccagcttcatcaatgtctcgatgtccaccatcacatcgaagtggttc 1728 Query: 66 ggggaggacgagaaaaatgtccgagcattgttcagcttggctgcaaaggtggctcctact 125 ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 1729 ggggaggacgagaaaaacgtccgagcattgttcagtttggctgctaaggttgctcctaca 1788 Query: 126 atcatttttgtggacgaggtagatagtatgttggggcagcgcgctcgctgcggtgagcat 185 |||||||||||||| ||||| || |||||||| || ||||||||||| |||||||| ||| Sbjct: 1789 atcatttttgtggatgaggtggacagtatgttaggacagcgcgctcgatgcggtgaacat 1848 Query: 186 gaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatcttatcgaag 245 ||||||||| ||||||||||||||||||||||||| || ||||||||| || | || || Sbjct: 1849 gaggcgatgcggaagatcaagaatgagttcatgagtcactgggatggtctcctgtcaaaa 1908 Query: 246 tctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgatgaagcc 305 || |||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 1909 tcgggtgaaagaatccttgttcttgctgctacaaatagaccctttgatcttgatgaagcc 1968 Query: 306 attattaggaggttcgagcgcagaatcatggttggccttcccactcaagagagcagagag 365 || |||||||| || |||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 1969 atcattaggagatttgagcgcagaatcatggttggccttccaactctagatagcagagag 2028 Query: 366 ctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatcgagtacaaggag 425 ||||| ||||||||| | ||||| || |||||||| | | |||| || || ||||||||| Sbjct: 2029 ctgatcttaaggacactattgtcaaaagagaaggttgctgaagatattgattacaaggag 2088 Query: 426 cttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatctttgtgttacagct 485 |||||||| ||||||||||| ||||| || || || ||||||||||||||||| |||||| Sbjct: 2089 cttgcaacaatgaccgaaggatacagtggaagcgaccttaagaatctttgtgtgacagct 2148 Query: 486 gcttaccgaccggttaggtagctcct 511 |||||||| || |||||| ||||||| Sbjct: 2149 gcttaccgccctgttagggagctcct 2174
>dbj|AK107350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H04, full insert sequence Length = 2465 Score = 527 bits (266), Expect = e-146 Identities = 446/506 (88%) Strand = Plus / Plus Query: 6 aatgatgccggtgccagcttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttc 65 ||||| || |||||||||||||||||||| || ||||| || ||||||||||| |||||| Sbjct: 1794 aatgacgctggtgccagcttcatcaatgtctcgatgtccaccatcacatcgaagtggttc 1853 Query: 66 ggggaggacgagaaaaatgtccgagcattgttcagcttggctgcaaaggtggctcctact 125 ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 1854 ggggaggacgagaaaaacgtccgagcattgttcagtttggctgctaaggttgctcctaca 1913 Query: 126 atcatttttgtggacgaggtagatagtatgttggggcagcgcgctcgctgcggtgagcat 185 |||||||||||||| ||||| || |||||||| || ||||||||||| |||||||| ||| Sbjct: 1914 atcatttttgtggatgaggtggacagtatgttaggacagcgcgctcgatgcggtgaacat 1973 Query: 186 gaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatcttatcgaag 245 ||||||||| ||||||||||||||||||||||||| || ||||||||| || | || || Sbjct: 1974 gaggcgatgcggaagatcaagaatgagttcatgagtcactgggatggtctcctgtcaaaa 2033 Query: 246 tctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgatgaagcc 305 || |||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 2034 tcgggtgaaagaatccttgttcttgctgctacaaatagaccctttgatcttgatgaagcc 2093 Query: 306 attattaggaggttcgagcgcagaatcatggttggccttcccactcaagagagcagagag 365 || |||||||| || |||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 2094 atcattaggagatttgagcgcagaatcatggttggccttccaactctagatagcagagag 2153 Query: 366 ctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatcgagtacaaggag 425 ||||| ||||||||| | ||||| || |||||||| | | |||| || || ||||||||| Sbjct: 2154 ctgatcttaaggacactattgtcaaaagagaaggttgctgaagatattgattacaaggag 2213 Query: 426 cttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatctttgtgttacagct 485 |||||||| ||||||||||| ||||| || || || ||||||||||||||||| |||||| Sbjct: 2214 cttgcaacaatgaccgaaggatacagtggaagcgaccttaagaatctttgtgtgacagct 2273 Query: 486 gcttaccgaccggttaggtagctcct 511 |||||||| || |||||| ||||||| Sbjct: 2274 gcttaccgccctgttagggagctcct 2299
>dbj|AK072537.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133N21, full insert sequence Length = 2989 Score = 527 bits (266), Expect = e-146 Identities = 446/506 (88%) Strand = Plus / Plus Query: 6 aatgatgccggtgccagcttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttc 65 ||||| || |||||||||||||||||||| || ||||| || ||||||||||| |||||| Sbjct: 1795 aatgacgctggtgccagcttcatcaatgtctcgatgtccaccatcacatcgaagtggttc 1854 Query: 66 ggggaggacgagaaaaatgtccgagcattgttcagcttggctgcaaaggtggctcctact 125 ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 1855 ggggaggacgagaaaaacgtccgagcattgttcagtttggctgctaaggttgctcctaca 1914 Query: 126 atcatttttgtggacgaggtagatagtatgttggggcagcgcgctcgctgcggtgagcat 185 |||||||||||||| ||||| || |||||||| || ||||||||||| |||||||| ||| Sbjct: 1915 atcatttttgtggatgaggtggacagtatgttaggacagcgcgctcgatgcggtgaacat 1974 Query: 186 gaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatcttatcgaag 245 ||||||||| ||||||||||||||||||||||||| || ||||||||| || | || || Sbjct: 1975 gaggcgatgcggaagatcaagaatgagttcatgagtcactgggatggtctcatgtcaaaa 2034 Query: 246 tctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgatgaagcc 305 || |||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 2035 tcgggtgaaagaatccttgttcttgctgctacaaatagaccctttgatcttgatgaagcc 2094 Query: 306 attattaggaggttcgagcgcagaatcatggttggccttcccactcaagagagcagagag 365 || |||||||| || |||||||||||||||||||||||||| |||| ||| ||||||||| Sbjct: 2095 atcattaggagatttgagcgcagaatcatggttggccttccaactctagatagcagagag 2154 Query: 366 ctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatcgagtacaaggag 425 ||||| ||||||||| | ||||| || |||||||| | | |||| || || ||||||||| Sbjct: 2155 ctgatcttaaggacactattgtcaaaagagaaggttgctgaagatattgattacaaggag 2214 Query: 426 cttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatctttgtgttacagct 485 |||||||| ||||||||||| ||||| || || || ||||||||||||||||| |||||| Sbjct: 2215 cttgcaacaatgaccgaaggatacagtggaagcgaccttaagaatctttgtgtgacagct 2274 Query: 486 gcttaccgaccggttaggtagctcct 511 |||||||| || |||||| ||||||| Sbjct: 2275 gcttaccgccctgttagggagctcct 2300
>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0009C07, complete sequence Length = 148731 Score = 355 bits (179), Expect = 1e-94 Identities = 287/323 (88%) Strand = Plus / Minus Query: 6 aatgatgccggtgccagcttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttc 65 ||||| || |||||||||||||||||||| || ||||| || ||||||||||| |||||| Sbjct: 29126 aatgacgctggtgccagcttcatcaatgtctcgatgtccaccatcacatcgaagtggttc 29067 Query: 66 ggggaggacgagaaaaatgtccgagcattgttcagcttggctgcaaaggtggctcctact 125 ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 29066 ggggaggacgagaaaaacgtccgagcattgttcagtttggctgctaaggttgctcctaca 29007 Query: 126 atcatttttgtggacgaggtagatagtatgttggggcagcgcgctcgctgcggtgagcat 185 |||||||||||||| ||||| || |||||||| || ||||||||||| |||||||| ||| Sbjct: 29006 atcatttttgtggatgaggtggacagtatgttaggacagcgcgctcgatgcggtgaacat 28947 Query: 186 gaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatcttatcgaag 245 ||||||||| ||||||||||||||||||||||||| || ||||||||| || | || || Sbjct: 28946 gaggcgatgcggaagatcaagaatgagttcatgagtcactgggatggtctcctgtcaaaa 28887 Query: 246 tctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgatgaagcc 305 || |||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 28886 tcgggtgaaagaatccttgttcttgctgctacaaatagaccctttgatcttgatgaagcc 28827 Query: 306 attattaggaggttcgagcgcag 328 || |||||||| || |||||||| Sbjct: 28826 atcattaggagatttgagcgcag 28804 Score = 123 bits (62), Expect = 7e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 326 cagaatcatggttggccttcccactcaagagagcagagagctgattttaaggacagtttt 385 ||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||| | || Sbjct: 28711 cagaatcatggttggccttccaactctagatagcagagagctgatcttaaggacactatt 28652 Query: 386 gtcgaaggagaaggtcgataaagacatcgagtacaaggagcttgcaaccatgaccgaagg 445 ||| || |||||||| | | |||| || || ||||||||||||||||| ||||||||||| Sbjct: 28651 gtcaaaagagaaggttgctgaagatattgattacaaggagcttgcaacaatgaccgaagg 28592 Query: 446 ttacag 451 ||||| Sbjct: 28591 atacag 28586 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 466 agaatctttgtgttacagctgcttaccgaccggttaggtagctcct 511 ||||||||||||| |||||||||||||| || |||||| ||||||| Sbjct: 28474 agaatctttgtgtgacagctgcttaccgccctgttagggagctcct 28429
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 355 bits (179), Expect = 1e-94 Identities = 287/323 (88%) Strand = Plus / Minus Query: 6 aatgatgccggtgccagcttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttc 65 ||||| || |||||||||||||||||||| || ||||| || ||||||||||| |||||| Sbjct: 28874833 aatgacgctggtgccagcttcatcaatgtctcgatgtccaccatcacatcgaagtggttc 28874774 Query: 66 ggggaggacgagaaaaatgtccgagcattgttcagcttggctgcaaaggtggctcctact 125 ||||||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 28874773 ggggaggacgagaaaaacgtccgagcattgttcagtttggctgctaaggttgctcctaca 28874714 Query: 126 atcatttttgtggacgaggtagatagtatgttggggcagcgcgctcgctgcggtgagcat 185 |||||||||||||| ||||| || |||||||| || ||||||||||| |||||||| ||| Sbjct: 28874713 atcatttttgtggatgaggtggacagtatgttaggacagcgcgctcgatgcggtgaacat 28874654 Query: 186 gaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatcttatcgaag 245 ||||||||| ||||||||||||||||||||||||| || ||||||||| || | || || Sbjct: 28874653 gaggcgatgcggaagatcaagaatgagttcatgagtcactgggatggtctcctgtcaaaa 28874594 Query: 246 tctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgatgaagcc 305 || |||||||||||||| |||||||| || ||||||||||| ||||| |||||||||||| Sbjct: 28874593 tcgggtgaaagaatccttgttcttgctgctacaaatagaccctttgatcttgatgaagcc 28874534 Query: 306 attattaggaggttcgagcgcag 328 || |||||||| || |||||||| Sbjct: 28874533 atcattaggagatttgagcgcag 28874511 Score = 123 bits (62), Expect = 7e-25 Identities = 110/126 (87%) Strand = Plus / Minus Query: 326 cagaatcatggttggccttcccactcaagagagcagagagctgattttaaggacagtttt 385 ||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||| | || Sbjct: 28874418 cagaatcatggttggccttccaactctagatagcagagagctgatcttaaggacactatt 28874359 Query: 386 gtcgaaggagaaggtcgataaagacatcgagtacaaggagcttgcaaccatgaccgaagg 445 ||| || |||||||| | | |||| || || ||||||||||||||||| ||||||||||| Sbjct: 28874358 gtcaaaagagaaggttgctgaagatattgattacaaggagcttgcaacaatgaccgaagg 28874299 Query: 446 ttacag 451 ||||| Sbjct: 28874298 atacag 28874293 Score = 60.0 bits (30), Expect = 9e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 466 agaatctttgtgttacagctgcttaccgaccggttaggtagctcct 511 ||||||||||||| |||||||||||||| || |||||| ||||||| Sbjct: 28874181 agaatctttgtgtgacagctgcttaccgccctgttagggagctcct 28874136
>dbj|AB009055.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXC20 Length = 81575 Score = 103 bits (52), Expect = 6e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || ||||||||||| ||||||||||| |||| ||||||||||| | | Sbjct: 40182 gagcatgaagctatgaggaagattaagaatgagtttatgacacattgggatgggctaatg 40123 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 |||| | |||||||| || ||||||||||| |||||||| ||||||||||| |||||| Sbjct: 40122 acgaaacccggtgaaaggattctcgttcttgcagcgacaaacagaccgtttgatcttgat 40063 Query: 300 gaagccattattaggaggtt 319 ||||| || ||||||||||| Sbjct: 40062 gaagctatcattaggaggtt 40043 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 3 gcaaatgatgccggtgccagcttcatcaatgtgtcaatgtcgacaatcacatcgaaatgg 62 |||||||| || || || || ||||||||||| || ||||| |||||||| || |||||| Sbjct: 40359 gcaaatgaagctggagctagtttcatcaatgtctccatgtctacaatcacttcaaaatgg 40300 Query: 63 ttcggggaggacgagaaaaatgt 85 || || || ||||| || ||||| Sbjct: 40299 tttggagaagacgaaaagaatgt 40277
>gb|AY140458.1| Arabidopsis lyrata clone P1WA2-D03-KAR99-14 unknown protein gene, exons 8 through 13 and partial cds Length = 1562 Score = 85.7 bits (43), Expect = 1e-13 Identities = 226/287 (78%) Strand = Plus / Plus Query: 33 gtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaatgtccgagca 92 ||||||||||| |||||||| || |||||||| || || |||||||| || || |||| Sbjct: 572 gtgtcaatgtccacaatcacttcaaaatggtttggagaagacgagaagaacgtgagagct 631 Query: 93 ttgttcagcttggctgcaaaggtggctcctactatcatttttgtggacgaggtagatagt 152 ||||||| | | || || || ||| |||| ||||| || |||||||| || || ||||| Sbjct: 632 ttgttcacccttgcggccaaagtgtctccgactattatatttgtggatgaagtggatagc 691 Query: 153 atgttggggcagcgcgctcgctgcggtgagcatgaggcgatgaggaagatcaagaatgag 212 ||| |||| ||| | | | ||| |||||||| || |||||||||||||| |||||| Sbjct: 692 atgctgggacagaggacaagagtcggagagcatgaagctatgaggaagatcaaaaatgag 751 Query: 213 ttcatgagccattgggatggtatcttatcgaagtctggtgaaagaatcctcgttcttgcc 272 ||||||| ||||||||||| | | ||||| ||||||| | || ||||||||||| Sbjct: 752 ttcatgacacattgggatgggcttatgtcgaatgctggtgaccgtattctcgttcttgca 811 Query: 273 gcgacaaatagaccgtttgaccttgatgaagccattattaggaggtt 319 || ||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 812 gcaacaaacaggccttttgatctcgatgaagccatcatcaggaggtt 858
>gb|AY140457.1| Arabidopsis lyrata clone P1WA2-D03-KAR99-3 unknown protein gene, exons 8 through 13 and partial cds Length = 1562 Score = 85.7 bits (43), Expect = 1e-13 Identities = 226/287 (78%) Strand = Plus / Plus Query: 33 gtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaatgtccgagca 92 ||||||||||| |||||||| || |||||||| || || |||||||| || || |||| Sbjct: 572 gtgtcaatgtccacaatcacttcaaaatggtttggagaagacgagaagaacgtgagagct 631 Query: 93 ttgttcagcttggctgcaaaggtggctcctactatcatttttgtggacgaggtagatagt 152 ||||||| | | || || || ||| |||| ||||| || |||||||| || || ||||| Sbjct: 632 ttgttcacccttgcggccaaagtgtctccgactattatatttgtggatgaagtggatagc 691 Query: 153 atgttggggcagcgcgctcgctgcggtgagcatgaggcgatgaggaagatcaagaatgag 212 ||| |||| ||| | | | ||| |||||||| || |||||||||||||| |||||| Sbjct: 692 atgctgggacagaggacaagagtcggagagcatgaagctatgaggaagatcaaaaatgag 751 Query: 213 ttcatgagccattgggatggtatcttatcgaagtctggtgaaagaatcctcgttcttgcc 272 ||||||| ||||||||||| | | ||||| ||||||| | || ||||||||||| Sbjct: 752 ttcatgacacattgggatgggcttatgtcgaatgctggtgaccgtattctcgttcttgca 811 Query: 273 gcgacaaatagaccgtttgaccttgatgaagccattattaggaggtt 319 || ||||| || || ||||| || ||||||||||| || |||||||| Sbjct: 812 gcaacaaacaggccttttgatctcgatgaagccatcatcaggaggtt 858
>ref|NM_118938.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT4G28000 mRNA, complete cds Length = 2181 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 1582 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 1641 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 1642 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 1701 Query: 300 gaagccattattaggaggttcgagcgcagaatcatggttggccttcc 346 ||||| || || |||||||| ||||| ||||||||||| || ||||| Sbjct: 1702 gaagctatcatcaggaggtttgagcgaagaatcatggtgggtcttcc 1748
>ref|NM_188560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2433 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 24 ttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaat 83 ||||| ||||| ||||||||||| ||||||||||||||||| || || || || || ||| Sbjct: 1759 ttcataaatgtttcaatgtcgactatcacatcgaaatggtttggtgaagatgaaaagaat 1818 Query: 84 gtccgagcattgttca 99 || |||||||||||| Sbjct: 1819 gttagagcattgttca 1834 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 ||||| ||||| ||||||||||| || ||||||||||||| || |||||||| |||| Sbjct: 1915 gagcacgaggcaatgaggaagataaaaaatgagttcatgacacactgggatggcctcttg 1974 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || | | | | ||| ||| || || ||||| ||||| || |||| ||||| |||||| Sbjct: 1975 tcaagaccagatcaaaaaattcttgtccttgctgcgaccaaccgaccctttgatcttgat 2034 Query: 300 gaagccattattaggaggttcgagcgcagaatcatggttggcct 343 ||||| || ||| | ||||| |||||||| |||||||| ||||| Sbjct: 2035 gaagctatcattcgaaggtttgagcgcaggatcatggtcggcct 2078
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 24 ttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaat 83 ||||| ||||| ||||||||||| ||||||||||||||||| || || || || || ||| Sbjct: 6971268 ttcataaatgtttcaatgtcgactatcacatcgaaatggtttggtgaagatgaaaagaat 6971209 Query: 84 gtccgagcattgttca 99 || |||||||||||| Sbjct: 6971208 gttagagcattgttca 6971193 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| ||||| ||||||||||| || ||||||||||||| || |||||||| Sbjct: 6971112 gagcacgaggcaatgaggaagataaaaaatgagttcatgacacactgggatgg 6971060
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 24 ttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaat 83 ||||| ||||| ||||||||||| ||||||||||||||||| || || || || || ||| Sbjct: 138992 ttcataaatgtttcaatgtcgactatcacatcgaaatggtttggtgaagatgaaaagaat 138933 Query: 84 gtccgagcattgttca 99 || |||||||||||| Sbjct: 138932 gttagagcattgttca 138917 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| ||||| ||||||||||| || ||||||||||||| || |||||||| Sbjct: 138836 gagcacgaggcaatgaggaagataaaaaatgagttcatgacacactgggatgg 138784
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 24 ttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaat 83 ||||| ||||| ||||||||||| ||||||||||||||||| || || || || || ||| Sbjct: 93086 ttcataaatgtttcaatgtcgactatcacatcgaaatggtttggtgaagatgaaaagaat 93027 Query: 84 gtccgagcattgttca 99 || |||||||||||| Sbjct: 93026 gttagagcattgttca 93011 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Minus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| ||||| ||||||||||| || ||||||||||||| || |||||||| Sbjct: 92930 gagcacgaggcaatgaggaagataaaaaatgagttcatgacacactgggatgg 92878
>dbj|AK102301.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089N14, full insert sequence Length = 2913 Score = 63.9 bits (32), Expect = 5e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 24 ttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaat 83 ||||| ||||| ||||||||||| ||||||||||||||||| || || || || || ||| Sbjct: 1970 ttcataaatgtttcaatgtcgactatcacatcgaaatggtttggtgaagatgaaaagaat 2029 Query: 84 gtccgagcattgttca 99 || |||||||||||| Sbjct: 2030 gttagagcattgttca 2045 Score = 56.0 bits (28), Expect = 1e-04 Identities = 130/164 (79%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 ||||| ||||| ||||||||||| || ||||||||||||| || |||||||| |||| Sbjct: 2126 gagcacgaggcaatgaggaagataaaaaatgagttcatgacacactgggatggcctcttg 2185 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || | | | | ||| ||| || || ||||| ||||| || |||| ||||| |||||| Sbjct: 2186 tcaagaccagatcaaaaaattcttgtccttgctgcgaccaaccgaccctttgatcttgat 2245 Query: 300 gaagccattattaggaggttcgagcgcagaatcatggttggcct 343 ||||| || ||| | ||||| |||||||| |||||||| ||||| Sbjct: 2246 gaagctatcattcgaaggtttgagcgcaggatcatggtcggcct 2289
>ref|NM_105085.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G64110 transcript variant AT1G64110.1 mRNA, complete cds Length = 2868 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 catgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 2116 catgaagctatgagaaagatcaagaatgagtttatgagtcattgggatgg 2165 Score = 46.1 bits (23), Expect = 0.13 Identities = 140/179 (78%) Strand = Plus / Plus Query: 294 cttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttcccactcaa 353 ||||||||||||||||| || | ||||| || || |||||||| || || || || | Sbjct: 2227 cttgatgaagccattatcagacgattcgaacgaaggatcatggtgggactaccggctgta 2286 Query: 354 gagagcagagagctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatc 413 |||| |||||| |||| |||| ||| | ||| |||||||||| || ||| || || | Sbjct: 2287 gagaacagagaaaagattctaagaacattgttggcgaaggagaaagtagatgaaaacttg 2346 Query: 414 gagtacaaggagcttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatct 472 || |||||||| || |||| ||||| ||||| |||| || ||||||||||||||||| Sbjct: 2347 gattacaaggaactagcaatgatgacagaaggatacacaggaagtgatcttaagaatct 2405
>ref|NM_179511.1| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G64110 transcript variant AT1G64110.2 mRNA, complete cds Length = 2886 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 catgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 2134 catgaagctatgagaaagatcaagaatgagtttatgagtcattgggatgg 2183 Score = 46.1 bits (23), Expect = 0.13 Identities = 140/179 (78%) Strand = Plus / Plus Query: 294 cttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttcccactcaa 353 ||||||||||||||||| || | ||||| || || |||||||| || || || || | Sbjct: 2245 cttgatgaagccattatcagacgattcgaacgaaggatcatggtgggactaccggctgta 2304 Query: 354 gagagcagagagctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatc 413 |||| |||||| |||| |||| ||| | ||| |||||||||| || ||| || || | Sbjct: 2305 gagaacagagaaaagattctaagaacattgttggcgaaggagaaagtagatgaaaacttg 2364 Query: 414 gagtacaaggagcttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatct 472 || |||||||| || |||| ||||| ||||| |||| || ||||||||||||||||| Sbjct: 2365 gattacaaggaactagcaatgatgacagaaggatacacaggaagtgatcttaagaatct 2423
>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68 Length = 199749 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 43829 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 43888 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 43889 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 43948 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 43949 gaagctatcatcaggaggtttgagcg 43974
>emb|AL035524.1|ATT13J8 Arabidopsis thaliana DNA chromosome 4, BAC clone T13J8 (ESSAII project) Length = 83693 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 38693 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 38752 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 38753 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 38812 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 38813 gaagctatcatcaggaggtttgagcg 38838
>gb|AY062592.1| Arabidopsis thaliana similar to homeobox protein (At1g64110; F22C12.12) mRNA, partial cds Length = 2484 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 catgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 2134 catgaagctatgagaaagatcaagaatgagtttatgagtcattgggatgg 2183 Score = 46.1 bits (23), Expect = 0.13 Identities = 140/179 (78%) Strand = Plus / Plus Query: 294 cttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttcccactcaa 353 ||||||||||||||||| || | ||||| || || |||||||| || || || || | Sbjct: 2245 cttgatgaagccattatcagacgattcgaacgaaggatcatggtgggactaccggctgta 2304 Query: 354 gagagcagagagctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatc 413 |||| |||||| |||| |||| ||| | ||| |||||||||| || ||| || || | Sbjct: 2305 gagaacagagaaaagattctaagaacattgttggcgaaggagaaagtagatgaaaacttg 2364 Query: 414 gagtacaaggagcttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatct 472 || |||||||| || |||| ||||| ||||| |||| || ||||||||||||||||| Sbjct: 2365 gattacaaggaactagcaatgatgacagaaggatacacaggaagtgatcttaagaatct 2423
>gb|AY056097.1| Arabidopsis thaliana At1g64110/F22C12_22 mRNA, complete cds Length = 2828 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 catgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 2116 catgaagctatgagaaagatcaagaatgagtttatgagtcattgggatgg 2165 Score = 46.1 bits (23), Expect = 0.13 Identities = 140/179 (78%) Strand = Plus / Plus Query: 294 cttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttcccactcaa 353 ||||||||||||||||| || | ||||| || || |||||||| || || || || | Sbjct: 2227 cttgatgaagccattatcagacgattcgaacgaaggatcatggtgggactaccggctgta 2286 Query: 354 gagagcagagagctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatc 413 |||| |||||| |||| |||| ||| | ||| |||||||||| || ||| || || | Sbjct: 2287 gagaacagagaaaagattctaagaacattgttggcgaaggagaaagtagatgaaaacttg 2346 Query: 414 gagtacaaggagcttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatct 472 || |||||||| || |||| ||||| ||||| |||| || ||||||||||||||||| Sbjct: 2347 gattacaaggaactagcaatgatgacagaaggatacacaggaagtgatcttaagaatct 2405
>gb|BT006360.1| Arabidopsis thaliana At1g64110/F22C12_22 gene, complete cds Length = 2475 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 catgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 1891 catgaagctatgagaaagatcaagaatgagtttatgagtcattgggatgg 1940 Score = 46.1 bits (23), Expect = 0.13 Identities = 140/179 (78%) Strand = Plus / Plus Query: 294 cttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttcccactcaa 353 ||||||||||||||||| || | ||||| || || |||||||| || || || || | Sbjct: 2002 cttgatgaagccattatcagacgattcgaacgaaggatcatggtgggactaccggctgta 2061 Query: 354 gagagcagagagctgattttaaggacagttttgtcgaaggagaaggtcgataaagacatc 413 |||| |||||| |||| |||| ||| | ||| |||||||||| || ||| || || | Sbjct: 2062 gagaacagagaaaagattctaagaacattgttggcgaaggagaaagtagatgaaaacttg 2121 Query: 414 gagtacaaggagcttgcaaccatgaccgaaggttacagcggcagtgatcttaagaatct 472 || |||||||| || |||| ||||| ||||| |||| || ||||||||||||||||| Sbjct: 2122 gattacaaggaactagcaatgatgacagaaggatacacaggaagtgatcttaagaatct 2180
>gb|AY140456.1| Arabidopsis thaliana clone P1WA2-D03-6094 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140455.1| Arabidopsis thaliana clone P1WA2-D03-6092 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 718 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 777 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 778 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 837 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 838 gaagctatcatcaggaggtttgagcg 863
>gb|AY140454.1| Arabidopsis thaliana clone P1WA2-D03-6054 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140453.1| Arabidopsis thaliana clone P1WA2-D03-1248 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140452.1| Arabidopsis thaliana clone P1WA2-D03-1220 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140451.1| Arabidopsis thaliana clone P1WA2-D03-1084 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140450.1| Arabidopsis thaliana clone P1WA2-D03-1074 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140449.1| Arabidopsis thaliana clone P1WA2-D03-1006 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 718 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 777 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 778 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 837 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 838 gaagctatcatcaggaggtttgagcg 863
>gb|AY140448.1| Arabidopsis thaliana clone P1WA2-D03-996 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AY140447.1| Arabidopsis thaliana clone P1WA2-D03-970 unknown protein gene, exons 8 through 13 and partial cds Length = 1573 Score = 60.0 bits (30), Expect = 9e-06 Identities = 117/146 (80%) Strand = Plus / Plus Query: 180 gagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggtatctta 239 |||||||| || |||||||||||||| ||||||||||||| || |||||||| | | Sbjct: 717 gagcatgaagctatgaggaagatcaaaaatgagttcatgacacactgggatgggcttatg 776 Query: 240 tcgaagtctggtgaaagaatcctcgttcttgccgcgacaaatagaccgtttgaccttgat 299 || || | ||||| | || ||||||||||| || ||||| ||||| ||||| || ||| Sbjct: 777 tcaaatgcgggtgaccgtattctcgttcttgcagcaacaaacagaccatttgatctcgat 836 Query: 300 gaagccattattaggaggttcgagcg 325 ||||| || || |||||||| ||||| Sbjct: 837 gaagctatcatcaggaggtttgagcg 862
>gb|AC007764.2|AC007764 Genomic sequence for Arabidopsis thaliana BAC F22C12 from chromosome I, complete sequence Length = 111222 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 183 catgaggcgatgaggaagatcaagaatgagttcatgagccattgggatgg 232 ||||| || ||||| ||||||||||||||||| ||||| ||||||||||| Sbjct: 53011 catgaagctatgagaaagatcaagaatgagtttatgagtcattgggatgg 53060
>gb|AY110438.1| Zea mays CL3068_1 mRNA sequence Length = 1022 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Minus Query: 456 agtgatcttaagaatctttgtgttacagctgct 488 |||||||| ||||||||||||||||| |||||| Sbjct: 799 agtgatctcaagaatctttgtgttactgctgct 767
>ref|NM_118619.2| Arabidopsis thaliana ATP binding / nucleoside-triphosphatase/ nucleotide binding AT4G24860 mRNA, complete cds Length = 3400 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 456 agtgatcttaagaatctttgtgttacagctgc 487 ||||||||||||||||| |||||||| ||||| Sbjct: 3079 agtgatcttaagaatctatgtgttactgctgc 3110
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 48.1 bits (24), Expect = 0.033 Identities = 57/68 (83%) Strand = Plus / Plus Query: 24 ttcatcaatgtgtcaatgtcgacaatcacatcgaaatggttcggggaggacgagaaaaat 83 ||||| ||||| || ||||| || ||||| || |||||||| || || |||||||| ||| Sbjct: 70899 ttcattaatgtatccatgtctaccatcacttctaaatggtttggtgaagacgagaagaat 70958 Query: 84 gtccgagc 91 |||||||| Sbjct: 70959 gtccgagc 70966
>gb|AY142498.1| Arabidopsis thaliana unknown protein (At4g24850) mRNA, complete cds Length = 1360 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 456 agtgatcttaagaatctttgtgttacagctgc 487 ||||||||||||||||| |||||||| ||||| Sbjct: 1039 agtgatcttaagaatctatgtgttactgctgc 1070
>ref|NM_104894.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding AT1G62130 mRNA, complete cds Length = 3078 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 264 gttcttgccgcgacaaatagaccgtttgaccttga 298 |||||||| || ||||||||||| ||||||||||| Sbjct: 2596 gttcttgcagccacaaatagaccttttgaccttga 2630 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 459 gatcttaagaatctttgtgttacagctgc 487 |||||||||||||| |||||||| ||||| Sbjct: 2791 gatcttaagaatctatgtgttactgctgc 2819
>emb|AJ865262.1| Cocos nucifera microsatellite DNA, clone CnCir 170 Length = 763 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Plus Query: 282 agaccgtttgaccttgatgaagccattattaggaggttcgagcgcag 328 ||||| ||||| ||||||||||| |||||||||| ||| ||| |||| Sbjct: 30 agaccatttgatcttgatgaagcaattattaggaagtttgagtgcag 76
>gb|AC000375.1|F19K23 Sequence of BAC F19K23 from Arabidopsis thaliana chromosome 1, complete sequence Length = 97451 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 264 gttcttgccgcgacaaatagaccgtttgaccttga 298 |||||||| || ||||||||||| ||||||||||| Sbjct: 24720 gttcttgcagccacaaatagaccttttgaccttga 24686
>ref|NM_192869.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2439 Score = 42.1 bits (21), Expect = 2.0 Identities = 87/109 (79%) Strand = Plus / Plus Query: 288 tttgaccttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttccc 347 |||||||||||||| || | || ||||| || |||| |||||||||||| ||||| || Sbjct: 1855 tttgaccttgatgatgcggtgataaggagatttgagcacagaatcatggtcggcctccca 1914 Query: 348 actcaagagagcagagagctgattttaaggacagttttgtcgaaggaga 396 || ||||| |||||||||||| | | |||| | |||||||| |||| Sbjct: 1915 acgttggagagtagagagctgattctgaagacattgttgtcgaaagaga 1963
>gb|AC161032.19| Medicago truncatula clone mth2-21b7, complete sequence Length = 130355 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 177 ggtgagcatgaggcgatgaggaagatcaagaatgagttcatgagccattgggatggt 233 |||||||||||||| ||| | || || ||||||||||| ||| | ||||||||||| Sbjct: 20133 ggtgagcatgaggccatgcgtaaaatgaagaatgagtttatggtcaattgggatggt 20189
>gb|AC148655.4| Medicago truncatula clone mth2-61c11, complete sequence Length = 89884 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 423 gagcttgcaaccatgaccgaaggttacagcggcagtgatcttaag 467 |||||| |||| ||||| ||||| || ||||| |||||||||||| Sbjct: 78248 gagctttcaactatgacagaaggatatagcggaagtgatcttaag 78204
>dbj|AK066142.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013055O07, full insert sequence Length = 2789 Score = 42.1 bits (21), Expect = 2.0 Identities = 87/109 (79%) Strand = Plus / Plus Query: 288 tttgaccttgatgaagccattattaggaggttcgagcgcagaatcatggttggccttccc 347 |||||||||||||| || | || ||||| || |||| |||||||||||| ||||| || Sbjct: 1983 tttgaccttgatgatgcggtgataaggagatttgagcacagaatcatggtcggcctccca 2042 Query: 348 actcaagagagcagagagctgattttaaggacagttttgtcgaaggaga 396 || ||||| |||||||||||| | | |||| | |||||||| |||| Sbjct: 2043 acgttggagagtagagagctgattctgaagacattgttgtcgaaagaga 2091
>gb|AC010919.11| Drosophila melanogaster clone BACR32K23, complete sequence Length = 198967 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agaaaaatgtccgagcattg 95 |||||||||||||||||||| Sbjct: 51058 agaaaaatgtccgagcattg 51039
>ref|XM_654017.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1505.2), mRNA Length = 1413 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 tctggtgaaagaatcctcgt 265 |||||||||||||||||||| Sbjct: 93 tctggtgaaagaatcctcgt 74
>ref|XR_003707.1| PREDICTED: Mus musculus similar to peptidylprolyl isomerase H (LOC632905), mRNA Length = 609 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gatgaggaagatcaagaatg 210 |||||||||||||||||||| Sbjct: 525 gatgaggaagatcaagaatg 544
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 tgtcgaaggagaaggtcgat 404 |||||||||||||||||||| Sbjct: 88312 tgtcgaaggagaaggtcgat 88293
>emb|AJ245480.1|BNA245480 Brassica napus subsp. napus AtPP-A14 gene for putative S-adenosyl methionine salycilic acid carboxyl methionyl transferase and slg gene for S-locus glycoprotein, cultivar T2 Length = 87844 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ctttgtgttacagctgctta 490 |||||||||||||||||||| Sbjct: 344 ctttgtgttacagctgctta 325
>emb|AJ245479.1|BNA245479 Brassica napus subsp. napus Sll3, slk, srk, CePP, Fmt, SIAH1, AtPP, SIAH2, & ClpP genes Length = 64348 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 ctttgtgttacagctgctta 490 |||||||||||||||||||| Sbjct: 8630 ctttgtgttacagctgctta 8611
>gb|AC116546.1| Homo sapiens 3 BAC RP11-312H1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160421 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 gattttaaggacagttttgt 387 |||||||||||||||||||| Sbjct: 108277 gattttaaggacagttttgt 108258
>gb|AC098869.3| Homo sapiens BAC clone RP11-588L15 from 4, complete sequence Length = 188295 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 tctttgtgttacagctgctt 489 |||||||||||||||||||| Sbjct: 180530 tctttgtgttacagctgctt 180549
>dbj|AK066938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A20, full insert sequence Length = 2902 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 453 ggcagtgatcttaagaatctttgtgttacagctgct 488 ||||||||||| |||||||| ||| |||| |||||| Sbjct: 2038 ggcagtgatctcaagaatctatgtattactgctgct 2073
>gb|AE003500.4| Drosophila melanogaster chromosome X, section 52 of 74 of the complete sequence Length = 303344 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 agaaaaatgtccgagcattg 95 |||||||||||||||||||| Sbjct: 218972 agaaaaatgtccgagcattg 218953
>gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, complete sequence Length = 169338 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 gatgaggaagatcaagaatg 210 |||||||||||||||||||| Sbjct: 69472 gatgaggaagatcaagaatg 69453 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,918,678 Number of Sequences: 3902068 Number of extensions: 3918678 Number of successful extensions: 74520 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74326 Number of HSP's gapped (non-prelim): 187 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)