ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14k08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1227 bits (619), Expect = 0.0 Identities = 625/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118326 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 118385 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118386 ttttcctgggagtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcct 118445 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118446 cgtggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcgcttggtact 118505 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118506 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 118565 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118566 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 118625 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118626 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 118685 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118686 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 118745 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118746 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 118805 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118806 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 118865 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118866 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118925 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 118926 atcagtgagctattacgcactctttaa 118952 Score = 1227 bits (619), Expect = 0.0 Identities = 625/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96568 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 96509 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 96508 ttttcctgggagtatggcatcagttacatacttcagcgccgtagcgcctggtatgagcct 96449 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96448 cgtggagaagcaatcgctagtccacggggctcatacttcagcgctgcagcgcttggtact 96389 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96388 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 96329 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96328 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 96269 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96268 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 96209 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96208 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 96149 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 96089 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96088 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 96029 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96028 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 95969 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 95968 atcagtgagctattacgcactctttaa 95942
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118191 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 118250 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 118251 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 118310 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118311 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 118370 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118371 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 118430 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118431 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 118490 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118491 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 118550 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118551 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 118610 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118611 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 118670 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 118730 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118731 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118790 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 118791 atcagtgagctattacgcactctttaa 118817 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 96965 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 96906 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 96905 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 96846 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96845 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 96786 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96785 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 96726 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96725 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 96666 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96665 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 96606 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96605 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 96546 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96545 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 96486 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 96426 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96366 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 96365 atcagtgagctattacgcactctttaa 96339
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118191 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 118250 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 118251 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 118310 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118311 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 118370 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118371 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 118430 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118431 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 118490 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118491 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 118550 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118551 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 118610 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118611 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 118670 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118671 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 118730 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118731 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118790 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 118791 atcagtgagctattacgcactctttaa 118817 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 96965 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 96906 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 96905 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 96846 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96845 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 96786 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96785 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 96726 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96725 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 96666 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96665 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 96606 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96605 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 96546 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96545 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 96486 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 96426 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96366 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 96365 atcagtgagctattacgcactctttaa 96339
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118140 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 118199 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 118200 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 118259 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118260 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 118319 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118320 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 118379 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118380 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 118439 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118440 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 118499 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118500 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 118559 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118560 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 118619 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118620 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 118679 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118680 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118739 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 118740 atcagtgagctattacgcactctttaa 118766 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 96910 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 96851 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 96850 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 96791 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96790 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 96731 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96730 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 96671 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96670 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 96611 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96610 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 96551 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96550 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 96491 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96490 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 96431 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96430 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 96371 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96370 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96311 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 96310 atcagtgagctattacgcactctttaa 96284
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 31509543 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 31509484 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 31509483 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 31509424 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509423 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 31509364 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509363 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 31509304 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509303 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 31509244 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509243 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 31509184 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509183 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 31509124 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509123 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 31509064 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509063 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 31509004 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509003 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 31508944 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 31508943 atcagtgagctattacgcactctttaa 31508917 Score = 1187 bits (599), Expect = 0.0 Identities = 620/627 (98%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 27320007 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 27320066 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27320067 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 27320126 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 27320127 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtact 27320186 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27320187 cggacctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcacct 27320246 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320247 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 27320306 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320307 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 27320366 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 27320367 cttaggccctgactcaccctccgtggacgaaccttgtggaggaaaccttgggttttcagg 27320426 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320427 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 27320486 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320487 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 27320546 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320547 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 27320606 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 27320607 atcagtgagctattacgcactctttaa 27320633 Score = 531 bits (268), Expect = e-148 Identities = 268/268 (100%) Strand = Plus / Plus Query: 372 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512918 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11512977 Query: 432 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11512978 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 11513037 Query: 492 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513038 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 11513097 Query: 552 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513098 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 11513157 Query: 612 gatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||| Sbjct: 11513158 gatcagtgagctattacgcactctttaa 11513185
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 83053 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 83112 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 83113 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 83172 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83173 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 83232 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83233 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 83292 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83293 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 83352 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83353 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 83412 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83413 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 83472 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83473 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 83532 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83533 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 83592 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83593 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 83652 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 83653 atcagtgagctattacgcactctttaa 83679
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 124006 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 123947 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123946 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 123887 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123886 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 123827 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123826 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 123767 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123766 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 123707 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123706 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 123647 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123646 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 123587 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123586 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 123527 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123526 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 123467 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123466 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 123407 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 123406 atcagtgagctattacgcactctttaa 123380 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 15732 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 15673 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 15672 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 15613 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15612 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 15553 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15552 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 15493 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15492 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 15433 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15432 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 15373 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15372 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 15313 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15312 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 15253 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15252 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 15193 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15192 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 15133 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 15132 atcagtgagctattacgcactctttaa 15106
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 142540 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 142481 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 142480 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 142421 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142420 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 142361 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142360 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 142301 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142300 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 142241 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142240 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 142181 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142180 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 142121 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142120 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 142061 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142060 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 142001 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142000 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 141941 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 141940 atcagtgagctattacgcactctttaa 141914
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43150 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 43209 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 43210 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 43269 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43270 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 43329 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43330 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 43389 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43390 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 43449 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43450 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 43509 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43510 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 43569 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43570 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 43629 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43630 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 43689 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43690 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 43749 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 43750 atcagtgagctattacgcactctttaa 43776 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21967 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 21908 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 21907 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 21848 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21847 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 21788 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21787 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 21728 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21727 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 21668 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21667 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 21608 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21607 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 21548 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21547 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 21488 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21487 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 21428 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21427 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 21368 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 21367 atcagtgagctattacgcactctttaa 21341
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9269892 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 9269833 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9269832 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 9269773 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269772 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 9269713 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269712 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 9269653 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269652 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 9269593 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269592 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 9269533 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269532 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 9269473 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269472 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 9269413 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269412 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 9269353 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269352 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9269293 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 9269292 atcagtgagctattacgcactctttaa 9269266 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9229392 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 9229333 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9229332 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 9229273 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229272 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 9229213 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229212 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 9229153 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229152 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 9229093 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229092 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 9229033 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9229032 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 9228973 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228972 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 9228913 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228912 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 9228853 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228852 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9228793 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 9228792 atcagtgagctattacgcactctttaa 9228766 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9165980 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 9165921 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9165920 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 9165861 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165860 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 9165801 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165800 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 9165741 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165740 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 9165681 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165680 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 9165621 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165620 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 9165561 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165560 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 9165501 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165500 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 9165441 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165440 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9165381 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 9165380 atcagtgagctattacgcactctttaa 9165354 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9057806 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 9057747 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9057746 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 9057687 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057686 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 9057627 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057626 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 9057567 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057566 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 9057507 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057506 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 9057447 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057446 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 9057387 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057386 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 9057327 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057326 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 9057267 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057266 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9057207 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 9057206 atcagtgagctattacgcactctttaa 9057180 Score = 149 bits (75), Expect = 1e-32 Identities = 93/99 (93%) Strand = Plus / Minus Query: 104 ttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggct 163 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 25661870 ttcagcgccgtagcgcctggtacaagcctcgtggagaagcaatagctagtccacgaggct 25661811 Query: 164 catacttcagcgctgcagcgcttggtactcggacctcgg 202 ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 25661810 catacttcagcgccgcagcgcttggtactcgaacctcgg 25661772 Score = 99.6 bits (50), Expect = 1e-17 Identities = 56/58 (96%) Strand = Plus / Minus Query: 263 aacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 320 ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| Sbjct: 5792222 aacctataaccatcttttggctaacctagcctcctccgtccctccgtaccaataaggg 5792165
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19939877 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 19939818 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 19939817 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 19939758 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939757 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 19939698 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939697 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 19939638 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939637 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 19939578 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939577 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 19939518 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939517 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 19939458 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939457 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 19939398 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939397 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 19939338 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939337 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 19939278 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 19939277 atcagtgagctattacgcactctttaa 19939251 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10275554 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 10275613 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10275614 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 10275673 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275674 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 10275733 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275734 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 10275793 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275794 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 10275853 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275854 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 10275913 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275914 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 10275973 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10275974 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 10276033 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276034 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 10276093 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10276094 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 10276153 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 10276154 atcagtgagctattacgcactctttaa 10276180 Score = 1203 bits (607), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10388744 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 10388685 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10388684 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 10388625 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388624 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 10388565 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388564 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 10388505 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388504 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 10388445 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388444 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 10388385 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10388384 cttaggccctgactcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggg 10388325 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388324 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 10388265 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10388264 gacccccgctttcgcggttgcttccctctaaggcggaacgctctcctaccgatgcatttt 10388205 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388204 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 10388145 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 10388144 atcagtgagctattacgcactctttaa 10388118 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 577 gcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833473 gcttagccccgttcatcttcagcgcaagggcgctcgatc 15833511
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 9240389 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 9240448 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9240449 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 9240508 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240509 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 9240568 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240569 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 9240628 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240629 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 9240688 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240689 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 9240748 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240749 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 9240808 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240809 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 9240868 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240869 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 9240928 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240929 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 9240988 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 9240989 atcagtgagctattacgcactctttaa 9241015 Score = 240 bits (121), Expect = 5e-60 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 18 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 77 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 3579634 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 3579693 Query: 78 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 137 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 3579694 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 3579748 Query: 138 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 197 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3579749 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 3579808 Query: 198 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 257 || |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 3579809 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 3579867 Query: 258 ccttaaacc 266 ||||||||| Sbjct: 3579868 ccttaaacc 3579876 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 520 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 566 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 3580239 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 3580285 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 366 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaa 417 ||||||||||||||||| | |||| |||| |||||||| |||| |||||||| Sbjct: 22198978 gcctgatcttaggccctaattcactctccatggacgaatcttgtggaggaaa 22199029 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 563 agcttcggcagatcgcttagccccgttcatcttcagcgca 602 ||||| |||||||||||||||||| ||||| |||| |||| Sbjct: 22199093 agctttggcagatcgcttagccccattcattttcaacgca 22199132
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 31600059 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 31600000 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 31599999 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 31599940 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599939 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 31599880 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599879 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 31599820 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599819 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 31599760 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599759 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 31599700 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599699 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 31599640 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599639 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 31599580 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599579 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 31599520 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599519 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 31599460 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 31599459 atcagtgagctattacgcactctttaa 31599433 Score = 1187 bits (599), Expect = 0.0 Identities = 620/627 (98%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 27411330 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 27411389 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 27411390 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 27411449 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 27411450 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtact 27411509 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27411510 cggacctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcacct 27411569 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411570 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 27411629 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411630 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 27411689 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 27411690 cttaggccctgactcaccctccgtggacgaaccttgtggaggaaaccttgggttttcagg 27411749 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411750 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 27411809 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411810 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 27411869 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411870 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 27411929 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 27411930 atcagtgagctattacgcactctttaa 27411956 Score = 531 bits (268), Expect = e-148 Identities = 268/268 (100%) Strand = Plus / Plus Query: 372 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509681 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 11509740 Query: 432 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509741 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 11509800 Query: 492 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509801 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 11509860 Query: 552 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509861 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 11509920 Query: 612 gatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||| Sbjct: 11509921 gatcagtgagctattacgcactctttaa 11509948
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 46166 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 46225 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46226 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 46285 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46286 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 46345 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46346 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 46405 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46406 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 46465 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46466 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 46525 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46526 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 46585 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46586 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 46645 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46646 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 46705 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46706 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 46765 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 46766 atcagtgagctattacgcactctttaa 46792
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121990 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 122049 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122050 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 122109 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122110 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 122169 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122170 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 122229 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122230 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 122289 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122290 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 122349 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122350 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 122409 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122410 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 122469 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122470 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 122529 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122530 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 122589 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 122590 atcagtgagctattacgcactctttaa 122616 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100847 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 100788 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 100787 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 100728 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100727 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 100668 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100667 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 100608 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100607 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 100548 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100547 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 100488 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100487 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 100428 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100427 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 100368 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100367 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 100308 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100307 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 100248 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 100247 atcagtgagctattacgcactctttaa 100221
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 51602 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 51661 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 51662 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 51721 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51722 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 51781 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51782 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 51841 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51842 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 51901 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51902 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 51961 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51962 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 52021 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52022 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 52081 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52082 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 52141 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52142 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 52201 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 52202 atcagtgagctattacgcactctttaa 52228
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 814 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 755 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 695 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 635 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 575 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 515 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 455 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 395 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 335 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 275 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 215 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 214 atcagtgagctattacgcactctttaa 188
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1539 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 1480 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 1420 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1419 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 1360 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1359 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 1300 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 1240 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 1180 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 1120 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 1060 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 1000 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 940 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 939 atcagtgagctattacgcactctttaa 913
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1410 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 1351 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1350 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 1291 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 1231 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 1171 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1170 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 1111 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 1051 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 991 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 931 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 871 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 811 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 810 atcagtgagctattacgcactctttaa 784
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1539 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 1480 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 1420 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1419 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 1360 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1359 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 1300 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 1240 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1239 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 1180 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 1120 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 1060 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 1000 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 940 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 939 atcagtgagctattacgcactctttaa 913
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 19951153 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 19951094 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 19951093 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 19951034 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19951033 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 19950974 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950973 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 19950914 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950913 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 19950854 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950853 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 19950794 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950793 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 19950734 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950733 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 19950674 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950673 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 19950614 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950613 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 19950554 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 19950553 atcagtgagctattacgcactctttaa 19950527 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10281593 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 10281652 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10281653 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 10281712 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281713 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 10281772 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281773 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 10281832 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281833 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 10281892 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281893 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 10281952 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10281953 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 10282012 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282013 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 10282072 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282073 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 10282132 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10282133 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 10282192 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 10282193 atcagtgagctattacgcactctttaa 10282219 Score = 1203 bits (607), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 10394783 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 10394724 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 10394723 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 10394664 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394663 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 10394604 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394603 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 10394544 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394543 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 10394484 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394483 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 10394424 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10394423 cttaggccctgactcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggg 10394364 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394363 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 10394304 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10394303 gacccccgctttcgcggttgcttccctctaaggcggaacgctctcctaccgatgcatttt 10394244 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394243 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 10394184 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 10394183 atcagtgagctattacgcactctttaa 10394157 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 577 gcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841714 gcttagccccgttcatcttcagcgcaagggcgctcgatc 15841752
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122707 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 122766 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122767 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 122826 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122827 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 122886 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122887 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 122946 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122947 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 123006 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123007 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 123066 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123067 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 123126 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123127 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 123186 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123187 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 123246 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123247 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 123306 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 123307 atcagtgagctattacgcactctttaa 123333 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101524 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 101465 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 101464 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 101405 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101404 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 101345 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101344 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 101285 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101284 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 101225 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101224 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 101165 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101164 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 101105 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101104 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 101045 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101044 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 100985 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100984 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 100925 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 100924 atcagtgagctattacgcactctttaa 100898
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118134 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 118193 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 118194 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 118253 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118254 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 118313 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118314 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 118373 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118374 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 118433 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118434 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 118493 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118494 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 118553 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118554 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 118613 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118614 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 118673 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118674 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118733 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 118734 atcagtgagctattacgcactctttaa 118760 Score = 1219 bits (615), Expect = 0.0 Identities = 624/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 96905 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 96846 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 96845 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 96786 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96785 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 96726 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96725 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 96666 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96665 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 96606 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96605 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 96546 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96545 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 96486 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96485 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 96426 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96425 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 96366 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96365 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96306 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 96305 atcagtgagctattacgcactctttaa 96279
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 117107 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 117166 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 117167 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 117226 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117227 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 117286 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117287 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 117346 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117347 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 117406 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117407 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 117466 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117467 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 117526 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117527 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 117586 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117587 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 117646 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 117647 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 117706 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 117707 atcagtgagctattacgcactctttaa 117733
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 56879 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 56938 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 56939 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 56998 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 56999 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 57058 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57059 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 57118 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57119 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 57178 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57179 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 57238 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57239 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 57298 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57299 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 57358 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57359 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 57418 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 57419 gacatcccacagcttcggcagattgcttagccccgttcatcttcagcgcaagggcgctcg 57478 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 57479 atcagtgagctattacgcactctttaa 57505
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 683 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 624 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 623 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 564 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 504 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 503 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 444 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 384 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 383 aacaaggggtagtacaggaatattgacccgttgtccatcgactacgcctttcggcctgat 324 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 264 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 204 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 144 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 84 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 83 atcagtgagctattacgcactctttaa 57
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 627 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 568 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 567 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 508 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 448 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 388 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 328 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 327 aacaaggggtagtacaggaatattgacctgttgtccgtcgactacgcctttcggcctgat 268 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 208 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 148 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 88 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 28 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 27 atcagtgagctattacgcactctttaa 1
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1211 bits (611), Expect = 0.0 Identities = 623/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1162 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 1103 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1102 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 1043 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1042 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 983 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 923 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 863 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 803 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 743 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 683 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 aacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 623 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 622 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 563 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 562 atcagtgagctattacgcactctttaa 536
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1203 bits (607), Expect = 0.0 Identities = 623/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 118161 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 118220 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 118221 ttttcctgggagtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcct 118279 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118280 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 118339 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118340 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 118399 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118400 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 118459 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118460 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 118519 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118520 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 118579 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118580 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 118639 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118640 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 118699 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118700 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 118759 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 118760 atcagtgagctattacgcactctttaa 118786 Score = 1203 bits (607), Expect = 0.0 Identities = 623/627 (99%), Gaps = 1/627 (0%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 96957 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 96898 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 96897 ttttcctgggagtatggcatgggttacatacttca-cgccgtagcgcctggtatgagcct 96839 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96838 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 96779 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96778 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 96719 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96718 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 96659 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96658 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 96599 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96598 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 96539 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96538 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 96479 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96478 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 96419 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96418 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 96359 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 96358 atcagtgagctattacgcactctttaa 96332
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1203 bits (607), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 95136 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 95077 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 95076 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 95017 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95016 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 94957 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94956 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 94897 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94896 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 94837 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94836 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 94777 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 94776 cttaggccctgactcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggg 94717 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94716 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 94657 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 94656 gacccccgctttcgcggttgcttccctctaaggcggaacgctctcctaccgatgcatttt 94597 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94596 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 94537 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 94536 atcagtgagctattacgcactctttaa 94510
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1203 bits (607), Expect = 0.0 Identities = 622/627 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 29200 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 29141 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 29140 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 29081 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29080 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 29021 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 29020 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 28961 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28960 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 28901 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28900 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 28841 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28840 cttaggccctgactcaccctctgtggacgaaccttgcggaggaaaccttgggttttcggg 28781 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28780 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 28721 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28720 gacccccgctttcgcggttgcttccctctaaggcggaacgctctcctaccgatgcatttt 28661 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28660 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 28601 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 28600 atcagtgagctattacgcactctttaa 28574
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 1193 bits (602), Expect = 0.0 Identities = 614/618 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 559 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 558 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 499 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 498 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 439 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 379 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 319 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 318 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 259 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 cctaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 199 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 139 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 79 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 19 Query: 613 atcagtgagctattacgc 630 |||||||||||||||||| Sbjct: 18 atcagtgagctattacgc 1
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 1187 bits (599), Expect = 0.0 Identities = 620/627 (98%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 20214 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 20273 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 20274 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 20333 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20334 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagtgcttggtact 20393 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 20394 cggacctcggctcgaggcattttttctaccccttcttaccctgaaaaagcagggtcacct 20453 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20454 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 20513 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20514 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 20573 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 20574 cttaggccctgactcaccctccgtggacgaaccttgtggaggaaaccttgggttttcagg 20633 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20634 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 20693 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20694 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 20753 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20754 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 20813 Query: 613 atcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||| Sbjct: 20814 atcagtgagctattacgcactctttaa 20840
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1140 bits (575), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121933 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 121992 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 121993 ttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcct 122051 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 122052 cgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtact 122111 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122112 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 122171 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122172 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 122231 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 122232 aacaaggggtagtacaggaatattgacctgttgtccatcgacttagcctttcggcctgat 122291 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122292 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 122351 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122352 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 122411 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122412 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 122471 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 122472 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc-ca 122530 Query: 613 atcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||| Sbjct: 122531 gtcagtgagctattacgcactctttaa 122557 Score = 1140 bits (575), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100804 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 100745 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 100744 ttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcct 100686 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 100685 cgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtact 100626 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100625 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 100566 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100565 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 100506 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 100505 aacaaggggtagtacaggaatattgacctgttgtccatcgacttagcctttcggcctgat 100446 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100445 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 100386 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100385 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 100326 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100325 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 100266 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 100265 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc-ca 100207 Query: 613 atcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||| Sbjct: 100206 gtcagtgagctattacgcactctttaa 100180
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1140 bits (575), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7157 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 7098 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 7097 ttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcct 7039 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 7038 cgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtact 6979 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6978 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 6919 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6918 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 6859 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 6858 aacaaggggtagtacaggaatattgacctgttgtccatcgacttagcctttcggcctgat 6799 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6798 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 6739 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6738 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 6679 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6678 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 6619 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6618 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc-ca 6560 Query: 613 atcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||| Sbjct: 6559 gtcagtgagctattacgcactctttaa 6533
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1140 bits (575), Expect = 0.0 Identities = 616/627 (98%), Gaps = 2/627 (0%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1745 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 1686 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 1685 ttttcctgggagtatggcatgggttacatacttc-gcgccgtagcgcctggtatgagcct 1627 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1626 cgtggagaagcaatggctagtccacggggctcatactttcgcgctgcagcgcttggtact 1567 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1566 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 1507 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1506 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 1447 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1446 aacaaggggtagtacaggaatattgacctgttgtccatcgacttagcctttcggcctgat 1387 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1386 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 1327 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 1267 Query: 493 gacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatttt 552 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1266 gacccccgctttcgcgtttgcttccctctaaggcggaacgctcccctaccgatgcatttt 1207 Query: 553 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg 612 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1206 gacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgc-ca 1148 Query: 613 atcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||| Sbjct: 1147 gtcagtgagctattacgcactctttaa 1121
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 912 bits (460), Expect = 0.0 Identities = 463/464 (99%) Strand = Plus / Plus Query: 176 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgcagcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctg 60 Query: 236 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctc 120 Query: 296 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgact 180 Query: 356 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggagga 240 Query: 416 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacatt 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacatt 300 Query: 476 ctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctc 535 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 ctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcggaacgctc 360 Query: 536 ccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatctt 595 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatctt 420 Query: 596 cagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cagcgcaagggcgctcgatcagtgagctattacgcactctttaa 464
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 896 bits (452), Expect = 0.0 Identities = 455/456 (99%) Strand = Plus / Minus Query: 184 cttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 243 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 cttgttactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagca 1114 Query: 244 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1113 gggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtcc 1054 Query: 304 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 363 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 ctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgccttt 994 Query: 364 cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 993 cggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgg 934 Query: 424 gttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttc 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 gttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttc 874 Query: 484 cgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 cgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccg 814 Query: 544 atgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 603 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 atgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaa 754 Query: 604 gggcgctcgatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||||||||||| Sbjct: 753 gggcgctcgatcagtgagctattacgcactctttaa 718
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 888 bits (448), Expect = 0.0 Identities = 469/476 (98%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5634073 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 5634132 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 5634133 ttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcct 5634192 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634193 cgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 5634252 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634253 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 5634312 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634313 tgcgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 5634372 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5634373 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgacctgat 5634432 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634433 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 5634492 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634493 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 5634548 Score = 188 bits (95), Expect = 2e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 156 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 215 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13417087 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13417146 Query: 216 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 258 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13417147 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13417189
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 888 bits (448), Expect = 0.0 Identities = 469/476 (98%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5634062 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 5634121 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 5634122 ttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcct 5634181 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634182 cgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 5634241 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634242 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 5634301 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634302 tgcgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 5634361 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5634362 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgacctgat 5634421 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634422 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 5634481 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5634482 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 5634537 Score = 188 bits (95), Expect = 2e-44 Identities = 101/103 (98%) Strand = Plus / Plus Query: 156 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 215 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 13371361 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 13371420 Query: 216 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 258 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13371421 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 13371463
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 888 bits (448), Expect = 0.0 Identities = 469/476 (98%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 18812 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 18753 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 18752 ttttcctgggagtatggcatgggttacatacttcagcaccgtagcgcctggtatgagcct 18693 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18692 cgtcgagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 18633 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18632 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 18573 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18572 tgcgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 18513 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 18512 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgacctgat 18453 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18452 cttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggg 18393 Query: 433 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18392 gcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 18337
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 797 bits (402), Expect = 0.0 Identities = 405/406 (99%) Strand = Plus / Plus Query: 234 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcc 60 Query: 294 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcga 120 Query: 354 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 413 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ctacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggag 180 Query: 414 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgaca 240 Query: 474 ttctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgc 533 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 ttctcgcttccgcttcgtcgacccccgctttcgcgtttgcttccctctaaggcggaacgc 300 Query: 534 tcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatc 593 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatc 360 Query: 594 ttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 406
>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full insert sequence Length = 1809 Score = 765 bits (386), Expect = 0.0 Identities = 395/398 (99%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 398 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 339 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 338 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 279 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 219 Query: 193 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 cggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcacct 159 Query: 253 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 312 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 158 tgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtacc 99 Query: 313 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 372 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 98 aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgat 39 Query: 373 cttaggccctgactcaccctccgtggacgaaccttgcg 410 |||||||||||||||||||||||||||||||||||||| Sbjct: 38 cttaggccctgactcaccctccgtggacgaaccttgcg 1
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 753 bits (380), Expect = 0.0 Identities = 449/472 (95%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 126284 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 126343 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| Sbjct: 126344 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 126403 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 126404 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 126463 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126464 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 126523 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 126524 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 126583 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || || |||| ||||| ||||||||||||||| Sbjct: 126584 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttccctctaagg 126643 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126644 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 126703 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 126704 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 126755 Score = 753 bits (380), Expect = 0.0 Identities = 449/472 (95%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 108638 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 108579 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||| |||||||||| |||||| |||| |||||||||||||||||| Sbjct: 108578 tcttaccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggcta 108519 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 108518 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 108459 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108458 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 108399 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 108398 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 108339 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || || |||| ||||| ||||||||||||||| Sbjct: 108338 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttccctctaagg 108279 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108278 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 108219 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 108218 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 108167 Score = 159 bits (80), Expect = 1e-35 Identities = 105/113 (92%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126200 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagc 126259 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||| ||||||| ||| ||| ||||||||||||||||||||||||| Sbjct: 126260 ttttcctgagagtatgacatgggt----tacttcagcgccgtagcgcctggta 126308 Score = 159 bits (80), Expect = 1e-35 Identities = 105/113 (92%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 108722 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagc 108663 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||| ||||||| ||| ||| ||||||||||||||||||||||||| Sbjct: 108662 ttttcctgagagtatgacatgggt----tacttcagcgccgtagcgcctggta 108614
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 745 bits (376), Expect = 0.0 Identities = 448/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 132376 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 132435 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 132436 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 132495 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 132496 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132555 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132556 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132615 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132616 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 132675 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 132676 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 132735 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132736 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 132795 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 132796 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 132847 Score = 745 bits (376), Expect = 0.0 Identities = 448/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 106273 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 106214 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 106213 tcttaccctgaaaaaacagggacaccttgcgtccttgaaccgataaccatctttcggcta 106154 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 106153 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 106094 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106093 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106034 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106033 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105974 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 105973 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 105914 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105913 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 105854 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105853 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 105802 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132292 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 132351 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 132352 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 132400 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106357 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 106298 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 106297 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 106249
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 137921 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 137980 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 137981 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138040 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138041 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138100 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138101 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138160 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138161 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 138220 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || |||||| ||||| |||||||| |||||| Sbjct: 138221 agccgacattctcgcttccgcttcgtctactcccgctcacgcgggtgcttccccctaagg 138280 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 138281 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 138340 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 138341 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 138392 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111176 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111117 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 111116 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111057 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111056 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110997 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110996 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110937 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110936 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 110877 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || |||||| ||||| |||||||| |||||| Sbjct: 110876 agccgacattctcgcttccgcttcgtctactcccgctcacgcgggtgcttccccctaagg 110817 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 110816 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 110757 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110756 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 110705 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137837 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 137896 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 137897 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 137945 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111260 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 111201 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 111200 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 111152
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 131415 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 131474 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| ||||||| || ||| |||| |||||||||||||||||| Sbjct: 131475 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 131534 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131535 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131594 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131595 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131654 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131655 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 131714 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 131715 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 131774 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131775 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 131834 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131835 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 131886 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 105349 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 105290 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| ||||||| || ||| |||| |||||||||||||||||| Sbjct: 105289 tcttaccctgaaaaaacagggacaccttgcgttcttgaaccgataaccatctttcggcta 105230 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105229 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105170 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105169 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105110 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105109 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 105050 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 105049 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 104990 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104989 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 104930 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104929 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 104878 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131331 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 131390 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 131391 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 131439 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105433 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 105374 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 105373 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 105325
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 132640 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 132699 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 132700 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 132759 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 132760 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 132819 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132820 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 132879 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 132880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 132939 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || || |||| ||||| |||||| |||||||| Sbjct: 132940 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttctctctaagg 132999 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133000 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 133059 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 133060 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 133111 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 105331 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 105272 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105271 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105212 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105211 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105152 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105151 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105092 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105091 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105032 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || || |||| ||||| |||||| |||||||| Sbjct: 105031 agccgacattctcgcttccgcttcgtccacacctgcttgcgcgggtgcttctctctaagg 104972 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104971 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 104912 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104911 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 104860 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132556 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggtcgttcgagc 132615 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 132616 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 132664 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105415 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttaaaggtcgttcgagc 105356 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 105355 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 105307
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 138126 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 138185 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 138186 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 138245 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138246 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138305 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138306 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 138365 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138366 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 138425 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 138426 agccgacattctcgcttccgcttcgtccacccctgctctcgcgggtgcttccctctaagg 138485 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 138486 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 138545 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 138546 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 138597 Score = 737 bits (372), Expect = 0.0 Identities = 447/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 111173 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 111114 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 111113 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 111054 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111053 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 110994 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110993 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 110934 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 110933 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110874 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||||||| Sbjct: 110873 agccgacattctcgcttccgcttcgtccacccctgctctcgcgggtgcttccctctaagg 110814 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 110813 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 110754 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110753 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 110702 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138042 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 138101 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138102 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138150 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111257 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 111198 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111197 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111149
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131192 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131251 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 131252 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131311 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131312 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131371 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131372 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131431 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131432 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131491 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 131492 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 131551 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 131552 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 131611 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131612 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 131663 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105686 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105627 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105626 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105567 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105566 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105507 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105506 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105447 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105446 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105387 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 105386 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 105327 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 105326 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 105267 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105266 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 105215 Score = 190 bits (96), Expect = 4e-45 Identities = 109/113 (96%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131108 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 131167 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131168 ttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 131216 Score = 190 bits (96), Expect = 4e-45 Identities = 109/113 (96%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105770 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 105711 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 105710 ttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 105662
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130084 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130143 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 130144 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 130203 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 130204 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130263 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130264 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130323 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130324 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130383 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 130384 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 130443 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 130444 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 130503 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 130504 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 130555 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 104551 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 104492 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 104491 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 104432 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 104431 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 104372 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104371 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104312 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104311 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 104252 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 104251 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 104192 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 104191 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 104132 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104131 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 104080 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130000 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggccgttcgagc 130059 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 130060 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 130108 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104635 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggccgttcgagc 104576 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 104575 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 104527
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 141296 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 141355 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 141356 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 141415 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 141416 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 141475 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141476 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 141535 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141536 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 141595 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 141596 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 141655 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 141656 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 141715 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 141716 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 141767 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 112032 tacttcagcgccgtagcgcttggtactcggacctcggctcgaggcattttcactacccct 111973 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || |||||||| |||||||||||||||||| Sbjct: 111972 tcttaccctgacaaagcagggacaccttacgttcttaaaccgataaccatctttcggcta 111913 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 111912 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 111853 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111852 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111793 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111792 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 111733 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 111732 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 111673 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 111672 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 111613 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 111612 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 111561 Score = 167 bits (84), Expect = 6e-38 Identities = 106/113 (93%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 141212 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagc 141271 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 141272 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcttggta 141320 Score = 167 bits (84), Expect = 6e-38 Identities = 106/113 (93%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 112116 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgttgaaggtcgttcgagc 112057 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||| ||||| Sbjct: 112056 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcttggta 112008
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 135009 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 135068 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 135069 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 135128 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 135129 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 135188 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135189 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135248 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135249 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135308 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 135309 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtacttccctctaagg 135368 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135369 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135428 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135429 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 135480 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 107416 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 107357 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 107356 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 107297 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107296 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107237 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107236 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107177 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107176 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107117 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| | ||||||||||||| Sbjct: 107116 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtacttccctctaagg 107057 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107056 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 106997 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106996 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106945 Score = 167 bits (84), Expect = 6e-38 Identities = 106/113 (93%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 134984 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 134985 ttttcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctggta 135033 Score = 167 bits (84), Expect = 6e-38 Identities = 106/113 (93%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107500 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 107441 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||| | ||| ||||||||||||||||||||||||| Sbjct: 107440 ttttcctgggagtatggcgtgggt----tacttcagcgccgtagcgcctggta 107392
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 131185 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 131244 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 131245 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 131304 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 131305 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 131364 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131365 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 131424 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 131425 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 131484 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 131485 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 131544 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 131545 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 131604 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131605 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 131656 Score = 722 bits (364), Expect = 0.0 Identities = 445/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105684 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 105625 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 105624 tcttaccctgaaaaagcagggtcaccttacgtccttgaaccgataaccatctttcggcta 105565 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 105564 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 105505 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105504 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 105445 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105444 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 105385 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || ||||| ||||| |||||| |||||||| Sbjct: 105384 agccgacattctcgcttccgcttcgtccactaccgctcgcgcgggtgcttcactctaagg 105325 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 105324 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 105265 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105264 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 105213 Score = 190 bits (96), Expect = 4e-45 Identities = 109/113 (96%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131101 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 131160 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 131161 ttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 131209 Score = 190 bits (96), Expect = 4e-45 Identities = 109/113 (96%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105768 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 105709 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 105708 ttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 105660
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 722 bits (364), Expect = 0.0 Identities = 439/464 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||| | ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1218 tacttcagcgccgtagcacctggtactcgaacattggctcggggcattttctctacccct 1159 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1158 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1099 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 1098 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1039 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1038 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 979 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 978 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 919 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| Sbjct: 918 agccgacattctcgcttccgcttcgtccacccccgctctcgcgggtgcttccctctaagg 859 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 858 cggaacgctcccctaccgatgcatttttacatcccgcagcttcggcagatcgcttagccc 799 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacg 629 ||||||||||| ||||||| |||||||||||||||||||||||| Sbjct: 798 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacg 755 Score = 123 bits (62), Expect = 8e-25 Identities = 100/113 (88%), Gaps = 11/113 (9%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 1236 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||| ||| ||||||||||||||||| ||||||| Sbjct: 1235 -------gggagtatggcatgggt----tacttcagcgccgtagcacctggta 1194
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 716 bits (361), Expect = 0.0 Identities = 446/473 (94%), Gaps = 1/473 (0%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 137996 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 138055 Query: 226 tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 284 ||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||||| Sbjct: 138056 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 138115 Query: 285 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 344 |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 138116 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 138175 Query: 345 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138176 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 138235 Query: 405 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 464 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138236 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 138295 Query: 465 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 524 |||||||||||||||||||||||||||| || || ||| ||||| |||||| ||||||| Sbjct: 138296 aagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactctaag 138355 Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 138356 gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagcc 138415 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 138416 ccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 138468 Score = 716 bits (361), Expect = 0.0 Identities = 446/473 (94%), Gaps = 1/473 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 111949 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 111890 Query: 226 tcttaccctgaaaaa-gcagggtcaccttgtgtccttaaacctataaccatctttcggct 284 ||||||||||||||| ||| |||||||||| |||||| |||| ||||||||||||||||| Sbjct: 111889 tcttaccctgaaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttcggct 111830 Query: 285 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 344 |||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 111829 aacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgtt 111770 Query: 345 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111769 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 111710 Query: 405 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 464 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111709 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 111650 Query: 465 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 524 |||||||||||||||||||||||||||| || || ||| ||||| |||||| ||||||| Sbjct: 111649 aagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactctaag 111590 Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 111589 gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagcc 111530 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 111529 ccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 111477 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137912 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 137971 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 137972 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138020 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112033 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 111974 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111973 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111925 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 376 aggccctgactcaccctccgtgga 399 |||||||||||||||||||||||| Sbjct: 144304 aggccctgactcaccctccgtgga 144327 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 376 aggccctgactcaccctccgtgga 399 |||||||||||||||||||||||| Sbjct: 105641 aggccctgactcaccctccgtgga 105618
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 714 bits (360), Expect = 0.0 Identities = 444/472 (94%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 1582 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 1523 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 | |||||||||| | | ||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1522 ttttaccctgaacacaccgggacaccttgcgtccttgaaccgataaccatctttcggcta 1463 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 1462 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 1403 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1402 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1343 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1342 ttgcggaggaacccttgggttttcggggcattggattctcaccaatgtttgcgttactca 1283 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||| Sbjct: 1282 agccgacattctcgcttccgcttcgtccaccgccgctcgcgcggttgcttccccctaagg 1223 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1222 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 1163 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1162 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 1111 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1666 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 1607 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||| |||| ||| ||||||||||||||||||||||||| Sbjct: 1606 ttttcctgggagtatagcatgggt----tacttcagcgccgtagcgcctggta 1558
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 706 bits (356), Expect = 0.0 Identities = 445/472 (94%), Gaps = 2/472 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 534 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 475 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| |||| || |||||| |||| |||||||||||||||||| Sbjct: 474 tcttaccctgaaaaaacagggacaccgtgcgtccttgaaccgataaccatctttcggcta 415 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||| Sbjct: 414 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcgcctgttg 355 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 354 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 295 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 294 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 235 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||| | Sbjct: 234 agccgacattctcgcttccgcttcgtccacccccgctcgcgcgggtgcttccctctaa-g 176 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 175 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 116 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 115 cgttcatcttc-gcgcaagagcgctcgatcagtgagctattacgcactcttt 65 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 559 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 558 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 510
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 698 bits (352), Expect = 0.0 Identities = 442/472 (93%), Gaps = 5/472 (1%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 87840 tacttcagcgctgtagcgcttggtactcggacattggctcgaggcattttctctacccct 87781 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 87780 tcttaccctgaaa-----gggtcaccttgcgtccttgaaccgataaccatctttcggcta 87726 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 87725 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 87666 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87665 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 87606 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 87605 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 87546 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || || ||| ||| | |||||| |||| ||| Sbjct: 87545 agccgacattctcgcttccgcttcgtccacacctgctcgcgccggtgcttctctctgagg 87486 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct: 87485 cggaacgctcccctaccgatgtattttgacatcccacagcttcggcagatcgcttagtcc 87426 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 87425 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 87374 Score = 151 bits (76), Expect = 3e-33 Identities = 104/113 (92%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 87924 tacctacctacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagc 87865 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||| ||||||| ||||| Sbjct: 87864 ttttcctgggagtatggcatgggt----tacttcagcgctgtagcgcttggta 87816
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 698 bits (352), Expect = 0.0 Identities = 442/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||| ||||||||||||||| Sbjct: 1584 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacccct 1525 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1524 tcttaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1465 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 1464 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1405 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1404 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1345 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1344 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1285 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| | ||| ||| | |||||||| |||||| Sbjct: 1284 agccgacattctcgcttccgcttcgtctaccgctgctcgcgcaggtgcttccccctaagg 1225 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1224 cggaacgctcccctaccgatgcctttttacatcccacagcttcggcagatcgcttagccc 1165 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1164 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 1113 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1668 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 1609 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 1608 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 1560
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134318 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134377 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 134378 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134437 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 134438 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134497 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134498 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134557 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134558 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134617 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 134618 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 134677 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134678 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 134737 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134738 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134789 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107588 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107529 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 107528 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107469 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107468 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107409 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107408 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107349 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107348 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107289 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 107288 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 107229 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107228 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 107169 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107168 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 107117 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134234 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 134293 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134294 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 134342 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107672 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 107613 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107612 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 107564
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 134597 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 134656 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 134657 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 134716 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 134717 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 134776 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134777 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134836 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134837 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134896 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 134897 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 134956 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 134957 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 135016 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135017 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 135068 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||| |||||||||||| || Sbjct: 107810 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggtattttctctacctct 107751 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||| ||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 107750 tcttaccctaaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 107691 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 107690 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 107631 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107630 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107571 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107570 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107511 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || | ||| ||| | ||||||||||||||| Sbjct: 107510 agccgacattctcgcttccgcttcgtccacaactgctcgcgcaggtgcttccctctaagg 107451 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 107450 cggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgcttagccc 107391 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107390 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 107339 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134513 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 134572 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134573 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 134621 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107894 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 107835 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 107834 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 107786
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 128947 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 129006 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 129007 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 129066 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 129067 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 129126 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129127 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 129186 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 129187 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 129246 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||||||| Sbjct: 129247 agccgacattctcgcttccgcttcgtccaccactgctcgcgcgggtacttccctctaagg 129306 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 129307 cggaacgctcccctaccgattcatttttacatcccacagcttcggcagatcgcttagccc 129366 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 129367 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 129418 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | |||||| |||||||||||||||||| Sbjct: 103509 tacttcagcgccgtagcgcctggtactcgaacattggctcggggcattttctctacccct 103450 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 103449 tcttaccctgaaaaaacaggggcaccttgcgtccttgaaccgataaccatctttcggcta 103390 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 103389 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103330 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103329 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 103270 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| |||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 103269 ttgcggaggaacccttaggttttcgaggcattggattctcaccaacgtttgcgttactca 103210 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| | ||| ||||| | ||||||||||||| Sbjct: 103209 agccgacattctcgcttccgcttcgtccaccactgctcgcgcgggtacttccctctaagg 103150 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 103149 cggaacgctcccctaccgattcatttttacatcccacagcttcggcagatcgcttagccc 103090 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 103089 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 103038 Score = 168 bits (85), Expect = 1e-38 Identities = 108/114 (94%), Gaps = 5/114 (4%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgag 71 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 128862 tacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgag 128921 Query: 72 cttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 128922 cttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 128971 Score = 168 bits (85), Expect = 1e-38 Identities = 108/114 (94%), Gaps = 5/114 (4%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgag 71 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 103594 tacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgag 103535 Query: 72 cttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 103534 cttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 103485
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134446 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134505 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134506 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134565 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134566 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134625 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134626 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134685 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134686 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134745 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134746 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134805 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 134806 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 134865 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134866 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134917 Score = 690 bits (348), Expect = 0.0 Identities = 441/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107692 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107633 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107632 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107573 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107572 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107513 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107512 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107453 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107452 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107393 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107392 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107333 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107332 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107273 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107272 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 107221 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 134362 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 134421 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134422 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134471 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107776 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 107717 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107716 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107667
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134717 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134776 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134777 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134836 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134837 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134896 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134897 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134956 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134957 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135016 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 135017 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 135076 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135077 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135136 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135137 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 135188 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107913 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107854 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107853 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107794 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107793 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107734 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107733 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107674 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107673 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107614 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107613 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107554 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107553 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107494 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107493 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 107442 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 134633 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 134692 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134693 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134742 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107997 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 107938 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107937 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107888
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 682 bits (344), Expect = 0.0 Identities = 447/481 (92%), Gaps = 9/481 (1%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 138775 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 138834 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 138835 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 138894 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 138895 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 138954 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138955 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 139014 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 139015 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 139074 Query: 466 agccgacattctcgcttccgcttcgtc--gacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||||||||||||||| || || ||| ||||| ||||||||||||| Sbjct: 139075 agccgacattctcgcttccgcttcgtccacacgcctgctcgcgcgggtgcttccctctaa 139134 Query: 524 ggcggaacgctcccctaccgatgca-------ttttgacatcccacagcttcggcagatc 576 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 139135 ggcggaacgctcccctaccgatgcatttttactttttacatcccacagcttcggcagatc 139194 Query: 577 gcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctt 636 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 139195 gcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactctt 139254 Query: 637 t 637 | Sbjct: 139255 t 139255 Score = 682 bits (344), Expect = 0.0 Identities = 447/481 (92%), Gaps = 9/481 (1%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 111285 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 111226 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 111225 tcttaccctgaaaaagcagggtcaccttgcgtccttgaaccgataaccatctttcggcta 111166 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 111165 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 111106 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111105 cccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 111046 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111045 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 110986 Query: 466 agccgacattctcgcttccgcttcgtc--gacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||||||||||||||| || || ||| ||||| ||||||||||||| Sbjct: 110985 agccgacattctcgcttccgcttcgtccacacgcctgctcgcgcgggtgcttccctctaa 110926 Query: 524 ggcggaacgctcccctaccgatgca-------ttttgacatcccacagcttcggcagatc 576 ||||||||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 110925 ggcggaacgctcccctaccgatgcatttttactttttacatcccacagcttcggcagatc 110866 Query: 577 gcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctt 636 |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 110865 gcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactctt 110806 Query: 637 t 637 | Sbjct: 110805 t 110805 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138691 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 138750 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 138751 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 138799 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111369 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 111310 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 111309 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 111261
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 682 bits (344), Expect = 0.0 Identities = 445/477 (93%), Gaps = 5/477 (1%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 140519 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 140578 Query: 226 tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 280 ||||||||||||||| ||| |||||||||| |||||| |||| |||| ||| ||||| Sbjct: 140579 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 140638 Query: 281 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 340 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 140639 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 140698 Query: 341 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140699 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 140758 Query: 401 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 460 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 140759 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 140818 Query: 461 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 520 |||||||||||||||||||||||||||||||| || || ||| ||||| |||||| ||| Sbjct: 140819 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactc 140878 Query: 521 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 580 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 140879 taaggcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 140938 Query: 581 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 140939 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 140995 Score = 682 bits (344), Expect = 0.0 Identities = 445/477 (93%), Gaps = 5/477 (1%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||||||||||| |||||||||| Sbjct: 113138 tacttcagcgccgtagcgcctggtactcggacattggctcgaggcatttcctctacccct 113079 Query: 226 tcttaccctgaaaaa----gcagggtcaccttgtgtccttaaacctataa-ccatctttc 280 ||||||||||||||| ||| |||||||||| |||||| |||| |||| ||| ||||| Sbjct: 113078 tcttaccctgaaaaaaaaagcaaggtcaccttgcgtccttgaaccgataaaccacctttc 113019 Query: 281 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 340 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 113018 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 112959 Query: 341 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112958 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 112899 Query: 401 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 460 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 112898 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 112839 Query: 461 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 520 |||||||||||||||||||||||||||||||| || || ||| ||||| |||||| ||| Sbjct: 112838 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggtgcttcactc 112779 Query: 521 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 580 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 112778 taaggcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 112719 Query: 581 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 112718 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 112662 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 140435 tacctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 140494 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 140495 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 140543 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 113222 tacctacccacctgtgttggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 113163 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 113162 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 113114
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 135355 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 135414 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 135415 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 135474 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 135475 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 135534 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135535 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 135594 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 135595 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135654 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| || ||||| Sbjct: 135655 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctataagg 135714 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135715 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135774 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135775 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 135826 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 108202 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 108143 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 108142 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 108083 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 108082 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 108023 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108022 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107963 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107962 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107903 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| || ||||| Sbjct: 107902 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctataagg 107843 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107842 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107783 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107782 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 107731 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 135271 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 135330 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 135331 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 135380 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 108286 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 108227 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 108226 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 108177
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3107 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3048 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 3047 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 2988 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 2987 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 2928 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2927 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 2868 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2867 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 2808 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 2807 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 2748 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2747 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 2688 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2687 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 2636 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 3191 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 3132 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3131 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3082
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133963 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134022 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134023 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134082 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134083 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134142 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134143 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134202 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134203 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134262 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134263 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134322 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134323 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134382 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134383 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134434 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107073 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107014 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107013 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106954 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 106953 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106894 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106893 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106834 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106833 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106774 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106773 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106714 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106713 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106654 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106653 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106602 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 133879 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 133938 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133939 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 133988 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107157 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 107098 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107097 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107048
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134098 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134157 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134158 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134217 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134218 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134277 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134278 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134337 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134338 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134397 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134398 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134457 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134458 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134517 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134518 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134569 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107245 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107186 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107185 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107126 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107125 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107066 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107065 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107006 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107005 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106946 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106945 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106886 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106885 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106826 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106825 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106774 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 134014 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 134073 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134074 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134123 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107329 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 107270 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107269 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107220
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134096 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134155 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134156 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134215 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134216 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134275 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134276 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134335 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134336 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134395 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134396 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134455 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134456 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134515 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134516 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134567 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107242 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107183 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107182 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107123 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107122 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 107063 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107062 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107003 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107002 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106943 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106942 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106883 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106882 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106823 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106822 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106771 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 134012 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 134071 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134072 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134121 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107326 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 107267 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107266 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107217
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134008 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134067 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134068 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134127 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134128 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134187 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134188 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134247 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134248 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134307 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134308 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134367 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134368 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134427 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134428 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134479 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107120 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107061 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107060 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107001 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 107000 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106941 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106940 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106881 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106880 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106821 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106820 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106761 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106760 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106701 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106700 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106649 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 133924 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 133983 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133984 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134033 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107204 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 107145 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107144 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107095
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130284 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 130343 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 | ||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 130344 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 130403 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 130404 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 130463 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130464 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130523 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 130524 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 130583 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| | | | ||| ||||| | ||||||||||||| Sbjct: 130584 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccctctaagg 130643 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 130644 cggaacgctcccctaccgattcttttttacatcccacagcttcggcagatcgcttagccc 130703 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 130704 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 130755 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||||| ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 105110 tacttcagcgctgtagcgcctggtactcgaactttggctcgaggcattttctctacccct 105051 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 | ||||||||||||||||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 105050 tattaccctgaaaaagcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 104991 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 104990 acctagcctcctccgtccctcgggaccaacaaagggtagtacaggaatattcacctgttg 104931 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104930 tccatcgactacgcccttcggcctgatcttaggccctgactcaccctccgtggacgaacc 104871 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 104870 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 104811 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| | | | ||| ||||| | ||||||||||||| Sbjct: 104810 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccctctaagg 104751 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 |||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 104750 cggaacgctcccctaccgattcttttttacatcccacagcttcggcagatcgcttagccc 104691 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104690 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 104639 Score = 159 bits (80), Expect = 1e-35 Identities = 105/113 (92%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 130200 tacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagc 130259 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| | | ||||||||||| ||||||||||||| Sbjct: 130260 ttttcctgggagtatggcatggat----tacttcagcgctgtagcgcctggta 130308 Score = 159 bits (80), Expect = 1e-35 Identities = 105/113 (92%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 105194 tacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagc 105135 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| | | ||||||||||| ||||||||||||| Sbjct: 105134 ttttcctgggagtatggcatggat----tacttcagcgctgtagcgcctggta 105086
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 134715 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134774 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134775 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134834 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 134835 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 134894 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134895 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134954 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134955 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 135014 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 135015 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 135074 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 135075 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 135134 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135135 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 135186 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107911 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107852 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107851 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 107792 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 107791 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 107732 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107731 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 107672 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107671 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 107612 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 107611 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 107552 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 107551 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 107492 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107491 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 107440 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 134631 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 134690 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 134691 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134740 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107995 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 107936 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107935 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107886
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 133975 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 134034 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 134035 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 134094 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 134095 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 134154 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134155 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 134214 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134215 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 134274 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 134275 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 134334 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 134335 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 134394 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134395 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 134446 Score = 682 bits (344), Expect = 0.0 Identities = 440/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 107087 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 107028 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 107027 tcttaccctgaaaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 106968 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || |||||||||||||||||||||||| |||||||| Sbjct: 106967 acctagcctcctccgtccctcgggactaacaaggggtagtacaggaatattcacctgttg 106908 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106907 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 106848 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 106847 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 106788 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 106787 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 106728 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||| Sbjct: 106727 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagaccgcttagccc 106668 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106667 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106616 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 133891 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 133950 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 133951 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 134000 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 107171 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgcttaacgtcgttcgagc 107112 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 107111 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 107062
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 680 bits (343), Expect = 0.0 Identities = 440/472 (93%), Gaps = 4/472 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||||| ||||||| |||||||||| | ||||||||||||||||||||||||| Sbjct: 89928 tacttcagcgctgtagcgcttagtactcggacattggctcgaggcattttctctacccct 89869 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||| |||| |||||| |||||| |||| |||||||||||||||||| Sbjct: 89868 tcttaccctgaaaa----gggtaaccttgcgtccttgaaccgataaccatctttcggcta 89813 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 89812 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 89753 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89752 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 89693 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89692 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 89633 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| || || ||| ||| | ||||||||||| ||| Sbjct: 89632 agccgacattctcgcttccgcttcgtccacacctgctcgcgccggtgcttccctctgagg 89573 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || Sbjct: 89572 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagtcc 89513 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||| | |||||||||||||||||||||||||||||||| Sbjct: 89512 cgttcatcttcggcgcacgagcgctcgatcagtgagctattacgcactcttt 89461 Score = 157 bits (79), Expect = 5e-35 Identities = 85/87 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90012 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 89953 Query: 73 ttttcctgggagtatggcatcggttac 99 |||||||||||||||||||| |||||| Sbjct: 89952 ttttcctgggagtatggcatgggttac 89926
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 676 bits (341), Expect = 0.0 Identities = 444/477 (93%), Gaps = 6/477 (1%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 133404 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 133463 Query: 226 tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 280 |||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 133464 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 133523 Query: 281 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 340 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 133524 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 133583 Query: 341 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133584 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 133643 Query: 401 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 460 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 133644 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 133703 Query: 461 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 520 |||||||||||||||||||||||||||||||| || || ||| ||||| ||||||||| Sbjct: 133704 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggagcttccctc 133763 Query: 521 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 580 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 133764 taa-gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 133822 Query: 581 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 133823 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 133879 Score = 676 bits (341), Expect = 0.0 Identities = 444/477 (93%), Gaps = 6/477 (1%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||||||||||| | |||||| ||||||| |||||||||| Sbjct: 106878 tacttcagcgccgtagcgcctggtactcggacattggctcggggcatttcctctacccct 106819 Query: 226 tcttaccctg-----aaaaagcagggtcaccttgtgtccttaaacctataaccatctttc 280 |||||||||| |||||||| |||||||||| |||||| |||| ||||||||||||| Sbjct: 106818 tcttaccctgccctgaaaaagcaaggtcaccttgcgtccttgaaccgataaccatctttc 106759 Query: 281 ggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacc 340 |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||| Sbjct: 106758 ggctaacctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacc 106699 Query: 341 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106698 tgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggac 106639 Query: 401 gaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtt 460 |||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||| Sbjct: 106638 gaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtt 106579 Query: 461 actcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctc 520 |||||||||||||||||||||||||||||||| || || ||| ||||| ||||||||| Sbjct: 106578 actcaagccgacattctcgcttccgcttcgtccacacctgctcgcgcgggagcttccctc 106519 Query: 521 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 580 ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106518 taa-gcggaacgctcccctaccgatgcatttttacatcccacagcttcggcagatcgctt 106460 Query: 581 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106459 agccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 106403 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133320 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 133379 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 133380 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 133428 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106962 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 106903 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 106902 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 106854
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 674 bits (340), Expect = 0.0 Identities = 439/472 (93%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 3352 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 3293 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||| ||||||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 3292 tcttaccctgacaaagcagggacaccttacgttcttgaaccgataaccatctttcggcta 3233 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 3232 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 3173 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3172 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 3113 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 3112 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 3053 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| ||| ||||| ||||| ||||| |||||||| Sbjct: 3052 agccgacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctctctaagg 2993 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 2992 cggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgcttagccc 2933 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2932 cgttcatcttcggcgcaagagcgctcgatcagtgsgctattacgcactcttt 2881 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 3436 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 3377 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 3376 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 3327
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 660 bits (333), Expect = 0.0 Identities = 439/473 (92%), Gaps = 1/473 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 5804 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 5745 Query: 226 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 284 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 5744 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 5685 Query: 285 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 344 |||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct: 5684 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 5625 Query: 345 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5624 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 5565 Query: 405 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 464 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 5564 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 5505 Query: 465 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 524 |||||||||||||||||||||||||||| | ||| ||| ||||| | |||| |||||| Sbjct: 5504 aagccgacattctcgcttccgcttcgtccaaccctgctcgcgcgggtacttcgttctaag 5445 Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 5444 gcggaacgctcccctaccgattcatttttagatcccacagcttcggcagatcgcttagcc 5385 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 5384 ccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 5332 Score = 145 bits (73), Expect = 2e-31 Identities = 79/81 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 5888 tacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagc 5829 Query: 73 ttttcctgggagtatggcatc 93 ||||| ||||||||||||||| Sbjct: 5828 ttttcttgggagtatggcatc 5808
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 660 bits (333), Expect = 0.0 Identities = 439/473 (92%), Gaps = 1/473 (0%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| | ||||||| |||| |||| |||||||||||||||||||| Sbjct: 22121 tacttcagcgccggagcgcctcgtactcgaaccttggctggaggcattttctctacccct 22180 Query: 226 tcttaccctgaaaaagcagggt-caccttgtgtccttaaacctataaccatctttcggct 284 ||||||||||||||| ||||| |||||||||| ||| |||| ||||||||||||||||| Sbjct: 22181 tcttaccctgaaaaaacagggggcaccttgtgttcttgaaccgataaccatctttcggct 22240 Query: 285 aacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgtt 344 |||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||| Sbjct: 22241 aacctagcctcctccgtccctcgggaccaacaagaggtagtacaggaatattcacctgtt 22300 Query: 345 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22301 gtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaac 22360 Query: 405 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 464 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 22361 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 22420 Query: 465 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 524 |||||||||||||||||||||||||||| | ||| ||| ||||| | |||| |||||| Sbjct: 22421 aagccgacattctcgcttccgcttcgtccaaccctgctcgcgcgggtacttcgttctaag 22480 Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 ||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||| Sbjct: 22481 gcggaacgctcccctaccgattcatttttagatcccacagcttcggcagatcgcttagcc 22540 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 22541 ccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 22593 Score = 145 bits (73), Expect = 2e-31 Identities = 79/81 (97%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 22037 tacctacccacctgtgtcggtttcgggtacaggtacccttttgtttaaggtcgttcgagc 22096 Query: 73 ttttcctgggagtatggcatc 93 ||||| ||||||||||||||| Sbjct: 22097 ttttcttgggagtatggcatc 22117
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 654 bits (330), Expect = 0.0 Identities = 427/458 (93%), Gaps = 1/458 (0%) Strand = Plus / Minus Query: 180 agcgcttggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaa 239 ||||| ||||| ||| || | |||||||||||||||||||||||||||||||||||| || Sbjct: 1665 agcgcctggtattcgaacattggctcgaggcattttctctaccccttcttaccctgacaa 1606 Query: 240 agcagggtcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctcc 299 ||||||| |||||| || ||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1605 agcagggacaccttacgttcttgaaccgataaccatctttcggctaacctagcctcctcc 1546 Query: 300 gtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgc 359 ||||||| | |||||||||||| |||||||||||||| ||||||||||||||||||| || Sbjct: 1545 gtccctcgggaccaacaaggggcagtacaggaatattcacctgttgtccatcgacta-gc 1487 Query: 360 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacc 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1486 ctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaccc 1427 Query: 420 ttgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcg 479 || ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1426 ttaggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcg 1367 Query: 480 cttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccct 539 ||||||||||||| ||| ||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 1366 cttccgcttcgtccaccaccgctcgcgcggaggcttctctctaaggcggaacgctcccct 1307 Query: 540 accgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagc 599 ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1306 accgatgtatttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggc 1247 Query: 600 gcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1246 gcaagagcgctcgatcagtgagctattacgcactcttt 1209 Score = 133 bits (67), Expect = 8e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 1762 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 1703 Query: 73 ttttcctgggagtatggcatcggttac 99 |||||||||||||||||||| |||||| Sbjct: 1702 ttttcctgggagtatggcatgggttac 1676
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 636 bits (321), Expect = e-179 Identities = 438/473 (92%), Gaps = 3/473 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||| |||| || | ||||||||| ||||||||||||||| Sbjct: 1598 tacttcagcgccgtagcgcctggt-ctcgaacattggctcgaggtattttctctacccct 1540 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||||||| |||||| ||||||| |||||| |||| |||||||||||||||||| Sbjct: 1539 tcttaccctgaaaa-gcaggggcaccttgcgtccttgaaccgataaccatctttcggcta 1481 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 1480 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 1421 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccct-ccgtggacgaac 404 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1420 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctaccgtggacgaac 1361 Query: 405 cttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactc 464 |||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1360 cttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactc 1301 Query: 465 aagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaag 524 |||||||||||||||||||||||||||| ||| | ||| ||| | |||||||| ||||| Sbjct: 1300 aagccgacattctcgcttccgcttcgtctaccactgctcgcgcaggtgcttccccctaag 1241 Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||| Sbjct: 1240 acggaacgctcccctaccgatgcctttttacatcccacagcttcggcagatcacttagcc 1181 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1180 ccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 1128 Score = 157 bits (79), Expect = 5e-35 Identities = 104/112 (92%), Gaps = 4/112 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1682 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 1623 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 124 |||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 1622 ttttcctgggagtatggctagggt----tacttcagcgccgtagcgcctggt 1575
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 636 bits (321), Expect = e-179 Identities = 438/472 (92%), Gaps = 5/472 (1%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||||| |||||| |||||||| || | ||||||||||||||||||||||||| Sbjct: 850 tacttcagcgctgtagcgct-ggtactcgaactttggctcgaggcattttctctacccct 792 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 | ||||||||||||||||||| |||| || |||||| |||| |||||||||||||||||| Sbjct: 791 tattaccctgaaaaagcaggggcaccatgcgtccttgaaccgataaccatctttcggcta 732 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||| |||||||||||||||||| |||||||| Sbjct: 731 acctagcctcctccgtccctcgg-accaacaaagggtagtacaggaatattcacctgttg 673 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 tccatcgactacg--tttcggcctgatcttaggccctgactcaccctccgtggacgaacc 615 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||| Sbjct: 614 ttgcggaggaacccttgggttttcgaggcattggattctcaccaacgtttgcgttactca 555 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| | | | ||| ||||| | |||||| |||||| Sbjct: 554 agccgacattctcgcttccgcttcgtccagcactgctcgcgcgggtccttccccctaagg 495 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 494 cggaacg-tcccctaccgattcattttgacatcccacagcttcggcagatcgcttagccc 436 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 435 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 384 Score = 151 bits (76), Expect = 3e-33 Identities = 79/80 (98%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 934 tacctacccacctgtgtcggtttcgggtacaggtacccatttgttgaaggtcgttcgagc 875 Query: 73 ttttcctgggagtatggcat 92 |||||||||||||||||||| Sbjct: 874 ttttcctgggagtatggcat 855
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 634 bits (320), Expect = e-179 Identities = 435/472 (92%), Gaps = 1/472 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 2078 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 2019 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| |||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 2018 tcttaccctgaaaaa-cagggtcacctttcgtccttgaaccgataaccatctttcggcta 1960 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | || ||||||||||||||||||||||| |||||||| Sbjct: 1959 acctagcctcctccgtccctcgggccctacaaggggtagtacaggaatattcacctgttg 1900 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 1840 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1839 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 1780 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||||||||||||||||| | ||| ||| | |||||||| |||| Sbjct: 1779 agccgacattctcgcttccgcttcgtctggcatggctcgcgccgatgcttccccctaaca 1720 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| Sbjct: 1719 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagatcgcttagccc 1660 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1659 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 1608 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2162 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 2103 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 2102 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggta 2054
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 634 bits (320), Expect = e-179 Identities = 320/320 (100%) Strand = Plus / Minus Query: 320 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 ggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggc 388 Query: 380 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgg 328 Query: 440 attctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 327 attctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 268 Query: 500 gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcc 559 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 gctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcc 208 Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 148 Query: 620 agctattacgcactctttaa 639 |||||||||||||||||||| Sbjct: 147 agctattacgcactctttaa 128
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 607 bits (306), Expect = e-170 Identities = 312/314 (99%) Strand = Plus / Plus Query: 326 acaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgac 385 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1 acaggaatattgacctgttgtccatcgagtacgcctttcggcctgatcttaggccctgac 60 Query: 386 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctc 120 Query: 446 accaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttc 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttc 180 Query: 506 gcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagc 565 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcgtttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagc 240 Query: 566 ttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctat 300 Query: 626 tacgcactctttaa 639 |||||||||||||| Sbjct: 301 tacgcactctttaa 314
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 593 bits (299), Expect = e-166 Identities = 403/434 (92%), Gaps = 4/434 (0%) Strand = Plus / Minus Query: 208 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 263 ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 264 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 323 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918 Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 5797 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccaaccctgctc 5738 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 ||||| | |||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5737 gcgcgggtacttctttctaaggcggaacgctcccctaccgattcatttttacatcccaca 5678 Query: 564 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 623 ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 5677 gcttcggcaaatcgcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagct 5618 Query: 624 attacgcactcttt 637 |||||||||||||| Sbjct: 5617 attacgcactcttt 5604 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| | Sbjct: 6174 tacctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggtcgttcgaac 6115 Query: 73 ttttcctgggagtatggcatc 93 ||||||||||||||||||||| Sbjct: 6114 ttttcctgggagtatggcatc 6094
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 593 bits (299), Expect = e-166 Identities = 403/434 (92%), Gaps = 4/434 (0%) Strand = Plus / Minus Query: 208 ggcattttctctacccctt-cttaccctgaaaaag-caggg--tcaccttgtgtccttaa 263 ||||||||||||||||||| |||||||||||||| ||||| ||||||| ||| ||| | Sbjct: 6037 ggcattttctctaccccttacttaccctgaaaaaaacagggagtcaccttatgttcttga 5978 Query: 264 acctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggggta 323 ||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| | Sbjct: 5977 accgataaccatctttcggctaacctagcctcctccgtccctcgggaccaacaaggggca 5918 Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5917 gtacaggaatattaacctgttgtccatcgactacgcctttcggcctgatcttaggtcctg 5858 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct: 5857 acttaccctccgtggacgaaccttgcggaggaatccttaggttttcggggcattggattc 5798 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||| Sbjct: 5797 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccaaccctgctc 5738 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 ||||| | |||| ||||||||||||||||||||||||||| |||||| |||||||||| Sbjct: 5737 gcgcgggtacttctttctaaggcggaacgctcccctaccgattcatttttacatcccaca 5678 Query: 564 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 623 ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 5677 gcttcggcaaatcgcttagccccgttcatcttcggcgcaagagcgctcgatcagtgagct 5618 Query: 624 attacgcactcttt 637 |||||||||||||| Sbjct: 5617 attacgcactcttt 5604 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||| | Sbjct: 6174 tacctacccacctgtgtcggtttccggtacaggtaccctcttgttgtaggtcgttcgaac 6115 Query: 73 ttttcctgggagtatggcatc 93 ||||||||||||||||||||| Sbjct: 6114 ttttcctgggagtatggcatc 6094
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 581 bits (293), Expect = e-162 Identities = 365/389 (93%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 1504 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 1445 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1444 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 1385 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1384 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1325 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1324 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 1265 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 1264 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 1205 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct: 1204 ttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcg 1145 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 1144 cttgatcagtgagctattacgcactcttt 1116 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||||| | |||||||||||| Sbjct: 1676 tacctacctacctgtgtcggtttcgggtacaggtacccacttgttaatggtcgttcgagc 1617 Query: 73 ttttcctgggagtatggcatcggttac 99 ||||| ||| ||| |||||| |||||| Sbjct: 1616 ttttcttggaagtgtggcattggttac 1590 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 188 gtactcggacctcggctcgaggcattttctctaccc 223 |||||| ||| | ||||||||||||||||||||||| Sbjct: 1570 gtactcagacgttggctcgaggcattttctctaccc 1535
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 581 bits (293), Expect = e-162 Identities = 365/389 (93%) Strand = Plus / Plus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 116645 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 116704 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 116705 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 116764 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 116765 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 116824 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 116825 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 116884 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 116885 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 116944 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct: 116945 ttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcg 117004 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 117005 cttgatcagtgagctattacgcactcttt 117033 Score = 581 bits (293), Expect = e-162 Identities = 365/389 (93%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| ||| || |||| |||||||||||||||||||||||||||||| |||||||| | Sbjct: 91457 accttgcgtctttgaaccgataaccatctttcggctaacctagcctccttcgtccctcgg 91398 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 91397 gaccaacaaggggtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 91338 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 91337 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 91278 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 91277 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 91218 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 91217 cgtccacacctgctcgcgctgatgcttccctctaaggcggaacgctcccctaccgatgta 91158 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||| Sbjct: 91157 ttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcg 91098 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 91097 cttgatcagtgagctattacgcactcttt 91069 Score = 111 bits (56), Expect = 3e-21 Identities = 99/113 (87%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 116473 tacctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggtcgttcgagc 116532 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||| ||| ||| |||||| | | ||||||||| ||||||||||||||| Sbjct: 116533 ttttcttggaagtgtggcattgat----tacttcagcaccgtagcgcctggta 116581 Score = 111 bits (56), Expect = 3e-21 Identities = 99/113 (87%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 91629 tacctacctacctgtgtcggtttcgggtacaggtacccacttgttaaaggtcgttcgagc 91570 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||| ||| ||| |||||| | | ||||||||| ||||||||||||||| Sbjct: 91569 ttttcttggaagtgtggcattgat----tacttcagcaccgtagcgcctggta 91521 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| | Sbjct: 116557 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 116616 Query: 226 tcttacc 232 | ||||| Sbjct: 116617 ttttacc 116623 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||| | | ||||| |||||||||||| | |||||| |||||||||||||||| | Sbjct: 91545 tacttcagcaccgtagcgcctggtactcggacgttggctcggggcattttctctaccctt 91486 Query: 226 tcttacc 232 | ||||| Sbjct: 91485 ttttacc 91479
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 5/457 (1%) Strand = Plus / Plus Query: 186 tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 245 |||||||||||| | ||||| |||||||||||||||||||||||||| | ||||| | | Sbjct: 144982 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 145041 Query: 246 gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 300 || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||| Sbjct: 145042 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 145101 Query: 301 tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 360 |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 145102 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 145161 Query: 361 tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 420 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 145162 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 145221 Query: 421 tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgc 480 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 145222 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgc 145281 Query: 481 ttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctccccta 540 |||||||| ||| || || ||| ||| | |||||||||||||||||||||||||||||| Sbjct: 145282 ttccgctttgtccacacctgctcgcgctggtgcttccctctaaggcggaacgctccccta 145341 Query: 541 ccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcg 600 |||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| Sbjct: 145342 ccgatgttttttgacatcccacagcttcggcagaccgcttagtcccgttcattttcggcg 145401 Query: 601 caagggcgctcgatcagtgagctattacgcactcttt 637 |||| ||||| |||||||||||||||||||||||||| Sbjct: 145402 caagagcgcttgatcagtgagctattacgcactcttt 145438 Score = 557 bits (281), Expect = e-155 Identities = 413/457 (90%), Gaps = 5/457 (1%) Strand = Plus / Minus Query: 186 tggtactcggacctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagg 245 |||||||||||| | ||||| |||||||||||||||||||||||||| | ||||| | | Sbjct: 113480 tggtactcggacgttggctcaaggcattttctctaccccttcttacctttaaaaaaaaag 113421 Query: 246 gtc-----accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccg 300 || |||||| |||||| |||| |||||||||| ||||||||| |||||||||||| Sbjct: 113420 gtttactaaccttgcgtccttgaaccgataaccatctctcggctaacttagcctcctccg 113361 Query: 301 tccctccgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcc 360 |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 113360 tccctcgggaccaacaaggggtagtacaggaatattcacctgttgtccatcaactacgcc 113301 Query: 361 tttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacct 420 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 113300 tttcggccttaccttaggccctgactcaccctccgtggacgaaccttgcggaggaaccct 113241 Query: 421 tgggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgc 480 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113240 taggttttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgc 113181 Query: 481 ttccgcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctccccta 540 |||||||| ||| || || ||| ||| | |||||||||||||||||||||||||||||| Sbjct: 113180 ttccgctttgtccacacctgctcgcgctggtgcttccctctaaggcggaacgctccccta 113121 Query: 541 ccgatgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcg 600 |||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||| ||| Sbjct: 113120 ccgatgttttttgacatcccacagcttcggcagaccgcttagtcccgttcattttcggcg 113061 Query: 601 caagggcgctcgatcagtgagctattacgcactcttt 637 |||| ||||| |||||||||||||||||||||||||| Sbjct: 113060 caagagcgcttgatcagtgagctattacgcactcttt 113024 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 144878 tacctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggtcgttcgagc 144937 Query: 73 ttttcctgggagtatggcat 92 ||||| ||||||| |||||| Sbjct: 144938 ttttcttgggagtgtggcat 144957 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||| Sbjct: 113584 tacctacctacctgtgtcggtttcgggtacaggtacccactcgttgaaggtcgttcgagc 113525 Query: 73 ttttcctgggagtatggcat 92 ||||| ||||||| |||||| Sbjct: 113524 ttttcttgggagtgtggcat 113505
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 553 bits (279), Expect = e-154 Identities = 426/474 (89%), Gaps = 2/474 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533 Query: 226 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 283 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473 Query: 284 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 343 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413 Query: 344 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353 Query: 404 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 463 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293 Query: 464 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 1292 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 1233 Query: 524 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 583 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 1232 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 1173 Query: 584 cccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1172 cccattcatcttcggcgcaagagcgcttgatcagtgagctattacgcactcttt 1119 Score = 105 bits (53), Expect = 2e-19 Identities = 99/114 (86%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 1676 tacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagc 1617 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 ||||| ||||||| |||||| || ||||||||||||||||| ||| |||| Sbjct: 1616 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 1567
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 553 bits (279), Expect = e-154 Identities = 426/474 (89%), Gaps = 2/474 (0%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 149653 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 149712 Query: 226 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 283 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 149713 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 149772 Query: 284 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 343 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 149773 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 149832 Query: 344 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 149892 Query: 404 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 463 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 149893 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 149952 Query: 464 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 149953 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 150012 Query: 524 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 583 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 150013 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 150072 Query: 584 cccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 150073 cccattcatcttcggcgcaagagcgcttgatcagtgagctattacgcactcttt 150126 Score = 553 bits (279), Expect = e-154 Identities = 426/474 (89%), Gaps = 2/474 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 119013 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 118954 Query: 226 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 283 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 118953 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 118894 Query: 284 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 343 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 118893 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 118834 Query: 344 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118833 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 118774 Query: 404 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 463 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118773 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 118714 Query: 464 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 118713 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 118654 Query: 524 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 583 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 118653 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 118594 Query: 584 cccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 118593 cccattcatcttcggcgcaagagcgcttgatcagtgagctattacgcactcttt 118540 Score = 105 bits (53), Expect = 2e-19 Identities = 99/114 (86%), Gaps = 4/114 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 149569 tacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagc 149628 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 ||||| ||||||| |||||| || ||||||||||||||||| ||| |||| Sbjct: 149629 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 149678 Score = 105 bits (53), Expect = 2e-19 Identities = 99/114 (86%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 119097 tacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagc 119038 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 ||||| ||||||| |||||| || ||||||||||||||||| ||| |||| Sbjct: 119037 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 118988
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 553 bits (279), Expect = e-154 Identities = 426/474 (89%), Gaps = 2/474 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||| | | ||| |||||| | ||||| |||||||||||||||| | Sbjct: 1592 tacttcagcgccgtagcacctagtattcggacgttggctcaaggcattttctctaccttt 1533 Query: 226 tcttaccctgaaaaagc--agggtcaccttgtgtccttaaacctataaccatctttcggc 283 || |||| || | || | ||| | |||||| ||||||||||| |||||||||||||||| Sbjct: 1532 tcctaccttggagaaaccaaggttaaccttgcgtccttaaaccgataaccatctttcggc 1473 Query: 284 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 343 ||||||| ||| ||||||||||| | |||||| | || ||||||||||||||| |||||| Sbjct: 1472 taacctaaccttctccgtccctcgggaccaactaaggatagtacaggaatattcacctgt 1413 Query: 344 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1412 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 1353 Query: 404 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 463 ||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1352 ccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1293 Query: 464 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||||||||||||||||| || || ||| ||| | ||||||||||||| Sbjct: 1292 caagccgacattctcgcttccgcttcgtccacacctgctcacgctggtgcttccctctaa 1233 Query: 524 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 583 ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||| Sbjct: 1232 ggcggaacgctcccctaccgatgtatttcgacatcccacagcttcggcagaccgcttagt 1173 Query: 584 cccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||| Sbjct: 1172 cccattcatcttcggcgcaagagcgcttgatcagtgagctattacgcactcttt 1119 Score = 105 bits (53), Expect = 2e-19 Identities = 99/114 (86%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 1676 tacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagc 1617 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 ||||| ||||||| |||||| || ||||||||||||||||| ||| |||| Sbjct: 1616 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 1567
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 551 bits (278), Expect = e-153 Identities = 428/476 (89%), Gaps = 4/476 (0%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 51097 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 51156 Query: 226 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 281 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 51157 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 51216 Query: 282 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 341 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 51217 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 51276 Query: 342 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 401 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51277 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 51336 Query: 402 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 461 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 51337 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 51396 Query: 462 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 521 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 51397 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 51456 Query: 522 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctta 581 ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 51457 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctta 51516 Query: 582 gccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| Sbjct: 51517 gccccgttcatattcggcgcaagagcgctcgatcagtaagctattacgcactcttt 51572 Score = 551 bits (278), Expect = e-153 Identities = 428/476 (89%), Gaps = 4/476 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 38731 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 38672 Query: 226 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 281 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 38671 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 38612 Query: 282 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 341 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 38611 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 38552 Query: 342 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 401 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38551 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 38492 Query: 402 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 461 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 38491 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 38432 Query: 462 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 521 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 38431 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 38372 Query: 522 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctta 581 ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 38371 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctta 38312 Query: 582 gccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| Sbjct: 38311 gccccgttcatattcggcgcaagagcgctcgatcagtaagctattacgcactcttt 38256 Score = 119 bits (60), Expect = 1e-23 Identities = 101/113 (89%), Gaps = 5/113 (4%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgag 71 |||||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||| Sbjct: 51012 tacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgag 51071 Query: 72 cttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 124 ||||||| ||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 51072 cttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 51120 Score = 119 bits (60), Expect = 1e-23 Identities = 101/113 (89%), Gaps = 5/113 (4%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgag 71 |||||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||| Sbjct: 38816 tacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgag 38757 Query: 72 cttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 124 ||||||| ||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 38756 cttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 38708
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 551 bits (278), Expect = e-153 Identities = 363/390 (93%), Gaps = 1/390 (0%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| |||||| |||| |||||||||| |||||||||||||||||||||||||||| | Sbjct: 1505 accttgcgtccttgaaccgataaccatctctcggctaacctagcctcctccgtccctcgg 1446 Query: 309 taccaacaagggg-tagtacaggaatattgacctgttgtccatcgactacgcctttcggc 367 |||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1445 gaccaacaagggggtggtacaggaatattcacctgttgtccatcgactacgcctttcggc 1386 Query: 368 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 427 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1385 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1326 Query: 428 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 487 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1325 tcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgct 1266 Query: 488 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 547 ||||| || || ||| ||| | |||||||| ||||||||||||||||||||||||||| Sbjct: 1265 tcgtccacacctgctcgcgctggtgcttccccctaaggcggaacgctcccctaccgatgt 1206 Query: 548 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 607 |||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||| || Sbjct: 1205 tttttgacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagc 1146 Query: 608 gctcgatcagtgagctattacgcactcttt 637 ||| |||||||||||||||||||||||||| Sbjct: 1145 gcttgatcagtgagctattacgcactcttt 1116 Score = 135 bits (68), Expect = 2e-28 Identities = 102/113 (90%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1678 tacctacctacctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagc 1619 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 ||||| ||||||| |||||| ||| ||||||||| ||||||||||||||| Sbjct: 1618 ttttcttgggagtgtggcatgggt----tacttcagcaccgtagcgcctggta 1570 Score = 65.9 bits (33), Expect = 2e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||| | | ||||| |||||||||||| | |||| |||| ||||||||||||||| Sbjct: 1594 tacttcagcaccgtagcgcctggtactcggacgttggcttgaggtattttctctacccct 1535 Query: 226 tcttaccct 234 |||||||| Sbjct: 1534 ccttaccct 1526
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 551 bits (278), Expect = e-153 Identities = 428/476 (89%), Gaps = 4/476 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| |||| ||| || | ||||||||||||||||||||||||| Sbjct: 5659 tacttcagcgccgtagcgcctggtgctcaaacattggctcgaggcattttctctacccct 5600 Query: 226 t--cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttc--g 281 | |||||||||||||| ||||| ||| || || ||| |||| ||||||||||||| | Sbjct: 5599 taacttaccctgaaaaaacaggggcactttacgttcttgaaccgataaccatctttctcg 5540 Query: 282 gctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacct 341 ||||||||||||| ||||||||||| | |||| | |||||||||||||||||||| |||| Sbjct: 5539 gctaacctagcctgctccgtccctcgggaccagcgaggggtagtacaggaatattcacct 5480 Query: 342 gttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 401 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5479 gttgtccattgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacg 5420 Query: 402 aaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgtta 461 ||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||| Sbjct: 5419 aaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgtta 5360 Query: 462 ctcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctct 521 ||||||||||||||||||||||||||||||| ||| | ||| || | |||||||||| Sbjct: 5359 ctcaagccgacattctcgcttccgcttcgtccaccgctgctcgtgcagaggcttccctct 5300 Query: 522 aaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctta 581 ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||| Sbjct: 5299 aaggcggaacgctcccctaccgatgtctttttacatcccacagcttcggcgaatcgctta 5240 Query: 582 gccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||| Sbjct: 5239 gccccgttcatattcggcgcaagagcgctcgatcagtaagctattacgcactcttt 5184 Score = 119 bits (60), Expect = 1e-23 Identities = 101/113 (89%), Gaps = 5/113 (4%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttg-ttgaaggtcgttcgag 71 |||||||||||||||||||||||| ||||||||| |||||||| || |||| |||||||| Sbjct: 5744 tacctacccacctgtgtcggtttcaggtacaggtgcccttttgtttaaaggccgttcgag 5685 Query: 72 cttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggt 124 ||||||| ||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 5684 cttttcccgggagtatggcgtgggt----tacttcagcgccgtagcgcctggt 5636
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 549 bits (277), Expect = e-153 Identities = 361/389 (92%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| ||||||||||| ||||||||||||||||||||||| ||| ||||||||||| | Sbjct: 5397 accttgcgtccttaaaccgataaccatctttcggctaacctaaccttctccgtccctcgg 5338 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 |||||| | || ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 5337 gaccaactaaggatagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 5278 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 5277 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 5218 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 5217 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 5158 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| | |||||||||||||||||||||||||||||||||||| | Sbjct: 5157 cgtccacacctgctcacgctggtgcttccctctaaggcggaacgctcccctaccgatgta 5098 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 ||| |||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||| Sbjct: 5097 tttcgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcg 5038 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 5037 cttgatcagtgagctattacgcactcttt 5009 Score = 105 bits (53), Expect = 2e-19 Identities = 99/114 (86%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| |||||||||||||||||||||||||| || ||||| |||||||||||||| Sbjct: 5566 tacctacctacctgtgtcggtttcgggtacaggtatccacttgttaaaggtcgttcgagc 5507 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 ||||| ||||||| |||||| || ||||||||||||||||| ||| |||| Sbjct: 5506 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcacctagtat 5457
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 549 bits (277), Expect = e-153 Identities = 361/389 (92%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 1488 accttgagtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 1429 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1428 gaccaacaaggggtagtacaggaatattcgcctgttgtccatcgactacgccttttggcc 1369 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 ||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||| Sbjct: 1368 tgatcttaggccctgactcaccctccgtggacgaaccttgcagaggaacccttaggtttt 1309 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1308 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 1249 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| | ||||| ||||||||||||||||||||||||||||| | Sbjct: 1248 cgtccacacctgctcacgctggcgcttctctctaaggcggaacgctcccctaccgatgta 1189 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 |||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||| Sbjct: 1188 ttttgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcg 1129 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 1128 cttgatcagtgagctattacgcactcttt 1100 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 1637 tacctacctacctgtgtcggtttcgggtacaggtacccacttgcttaaggtcgttcgagc 1578 Query: 73 ttttcctgggagtatggcat 92 ||||| ||||||| |||||| Sbjct: 1577 ttttcttgggagtgtggcat 1558 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 222 ||||||||| | | |||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1553 tacttcagcaccgtagcgcttggtactcggacgttggctcgaggcattttctctacc 1497
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 547 bits (276), Expect = e-152 Identities = 432/478 (90%), Gaps = 12/478 (2%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||| ||| || | ||||||||||||||||||||||||| Sbjct: 1043 tacttcagcgccgtagcgcctggtattcgaacattggctcgaggcattttctctacccct 984 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 |||||||||| ||| |||||| |||||| || ||| |||| |||||||||||||||||| Sbjct: 983 tcttaccctgcaaa-gcagggacaccttacgttcttgaaccgataaccatctttcggcta 925 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct: 924 acctagcctcctccgtccctcgggaccaacaaggggcagtacaggaatattcacctgttg 865 Query: 346 tccatcgactacgcctttcggcctga--tc----ttaggccctgactcaccctccgtgga 399 |||||||||||||||||||||| ||| || |||||||||||||||||||||||||| Sbjct: 864 tccatcgactacgcctttcggc-tgacgtcacgtttaggccctgactcaccctccgtgga 806 Query: 400 cgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgt 459 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | Sbjct: 805 cgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgc-- 748 Query: 460 tactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccct 519 ||||| | ||||||||||||||||||||||| ||| ||||| ||||| ||||| || Sbjct: 747 -actcacgt-gacattctcgcttccgcttcgtccaccaccgctcgcgcggaggcttctct 690 Query: 520 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgct 579 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 689 ctaaggcggaacgctcccctaccgatgtatttttacatcccacagcttcggcagatcgct 630 Query: 580 tagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 629 tagccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 572 Score = 155 bits (78), Expect = 2e-34 Identities = 78/78 (100%) Strand = Plus / Minus Query: 15 cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 74 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1702 cctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagctt 1643 Query: 75 ttcctgggagtatggcat 92 |||||||||||||||||| Sbjct: 1642 ttcctgggagtatggcat 1625 Score = 153 bits (77), Expect = 8e-34 Identities = 105/114 (92%), Gaps = 4/114 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||||| ||| | || ||||||||||| Sbjct: 1127 tacctacccacctgtgtcggtttcgggtacaggtaccctcttgctcaaagtcgttcgagc 1068 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtat 126 |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 1067 ttttcctgggagtatggcatgggt----tacttcagcgccgtagcgcctggtat 1018
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 543 bits (274), Expect = e-151 Identities = 274/274 (100%) Strand = Plus / Minus Query: 366 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 gcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggt 748 Query: 426 tttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccg 688 Query: 486 cttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgat 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 cttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgat 628 Query: 546 gcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagg 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 gcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagg 568 Query: 606 gcgctcgatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||||||||| Sbjct: 567 gcgctcgatcagtgagctattacgcactctttaa 534
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 541 bits (273), Expect = e-151 Identities = 354/381 (92%) Strand = Plus / Minus Query: 257 tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 316 ||||| |||| ||||||||||||||||||||||||||| ||||||||||| | |||| || Sbjct: 1500 tccttgaaccgataaccatctttcggctaacctagcctactccgtccctcgggaccagca 1441 Query: 317 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1440 aggggtagtacaggaatattcgcctgttgtccatcgactacgcctttcggcctgatctta 1381 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1380 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1321 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 496 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct: 1320 tggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgcttcgtccaca 1261 Query: 497 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgaca 556 || ||| ||| | |||||| | ||||||||||||||||||||||||||| ||||||||| Sbjct: 1260 cctgctcacgctggtgcttctccctaaggcggaacgctcccctaccgatgtattttgaca 1201 Query: 557 tcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatca 616 |||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||| ||||| Sbjct: 1200 tcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgcttgatca 1141 Query: 617 gtgagctattacgcactcttt 637 ||||||||||||||||||||| Sbjct: 1140 gtgagctattacgcactcttt 1120 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| | | | |||||||||||||| Sbjct: 1682 tacctacctacctgtgtcggtttcgggtacaggtacccactcgcttaaggtcgttcgagc 1623 Query: 73 ttttcctgggagtatggcat 92 ||||| |||||| |||||| Sbjct: 1622 ttttctcgggagtgtggcat 1603
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 531 bits (268), Expect = e-148 Identities = 268/268 (100%) Strand = Plus / Plus Query: 372 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63490 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 63549 Query: 432 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63550 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 63609 Query: 492 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63610 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 63669 Query: 552 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63670 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 63729 Query: 612 gatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||| Sbjct: 63730 gatcagtgagctattacgcactctttaa 63757
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 531 bits (268), Expect = e-148 Identities = 268/268 (100%) Strand = Plus / Minus Query: 372 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1179 tcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgg 1120 Query: 432 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1119 ggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgt 1060 Query: 492 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1059 cgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattt 1000 Query: 552 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 999 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 940 Query: 612 gatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||| Sbjct: 939 gatcagtgagctattacgcactctttaa 912
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 529 bits (267), Expect = e-147 Identities = 362/391 (92%), Gaps = 2/391 (0%) Strand = Plus / Plus Query: 247 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 306 |||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 114707 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 114765 Query: 307 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 366 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 114766 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 114825 Query: 367 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 426 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 114826 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 114885 Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 114886 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 114945 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||| || || ||| || | |||||| | ||||||||||||||||||||||||||| Sbjct: 114946 ttcgtccacacctgctcacg-tgatgcttctccctaaggcggaacgctcccctaccgatg 115004 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 ||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| | Sbjct: 115005 tattttgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagag 115064 Query: 607 cgctcgatcagtgagctattacgcactcttt 637 |||| |||||||||||||||||||||||||| Sbjct: 115065 cgcttgatcagtgagctattacgcactcttt 115095 Score = 529 bits (267), Expect = e-147 Identities = 362/391 (92%), Gaps = 2/391 (0%) Strand = Plus / Minus Query: 247 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 306 |||||||| ||||| |||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 87413 tcaccttgcatccttgaaccgataaccatctttcggctaacctagcctcctc-gtccctc 87355 Query: 307 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 366 | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 87354 gggaccaacaaggggtagtacaggaatatttgcctgttgtccatcgactacgcctttcgg 87295 Query: 367 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 426 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 87294 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 87235 Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 87234 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 87175 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||| || || ||| || | |||||| | ||||||||||||||||||||||||||| Sbjct: 87174 ttcgtccacacctgctcacg-tgatgcttctccctaaggcggaacgctcccctaccgatg 87116 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 ||||||||||||||||||||||||||| ||||||| ||| ||||||||| ||||||| | Sbjct: 87115 tattttgacatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagag 87056 Query: 607 cgctcgatcagtgagctattacgcactcttt 637 |||| |||||||||||||||||||||||||| Sbjct: 87055 cgcttgatcagtgagctattacgcactcttt 87025 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 114536 tacctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggtcgttcgagc 114595 Query: 73 ttttcctgggagtatggcat 92 ||||| ||||||| |||||| Sbjct: 114596 ttttcttgggagtgtggcat 114615 Score = 111 bits (56), Expect = 3e-21 Identities = 74/80 (92%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 87584 tacctacctacctgtgtcggtttcgggtacaggtacccacttgtttaaggtcgttcgagc 87525 Query: 73 ttttcctgggagtatggcat 92 ||||| ||||||| |||||| Sbjct: 87524 ttttcttgggagtgtggcat 87505 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 183 gcttggtactcggacctcggctcgaggcattttctctacc 222 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 114636 gcttggtactcggacattggctggaagcattttcactacc 114675 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Minus Query: 183 gcttggtactcggacctcggctcgaggcattttctctacc 222 ||||||||||||||| | |||| || |||||||| ||||| Sbjct: 87484 gcttggtactcggacattggctggaagcattttcactacc 87445
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 515 bits (260), Expect = e-143 Identities = 396/439 (90%), Gaps = 8/439 (1%) Strand = Plus / Minus Query: 201 ggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgtcct 260 ||||||||| |||||||||||||||||||||||||||||| ||||| |||||| || || Sbjct: 1552 ggctcgaggtattttctctaccccttcttaccctgaaaaa-cagggacaccttacgttct 1494 Query: 261 taaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaaggg 320 | |||| |||||||||||| |||||||||||||| ||||||||||| | ||||||||||| Sbjct: 1493 tgaaccgataaccatcttttggctaacctagcctgctccgtccctcgggaccaacaaggg 1434 Query: 321 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 380 ||||||||| |||||| |||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 1433 gtagtacagaaatattcacctgttgcccatcgactac-cgtttcggcctgatcttaggcc 1375 Query: 381 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 440 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct: 1374 ctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcattgga 1315 Query: 441 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 500 ||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||| | | Sbjct: 1314 ttctcaccaatgtttgcgttactcaagccgacattctcgcttccgtttcgtccaccgctg 1255 Query: 501 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg------cattttga 554 || || | ||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1254 ctcgtgcagaggcttccctctaaggcggaacgctcccctaccgatgtatttttattttta 1195 Query: 555 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 614 ||||||||||||||||| ||||||||||||||||| |||||| ||||||| ||||||||| Sbjct: 1194 catcccacagcttcggcggatcgcttagccccgttaatcttcggcgcaagagcgctcgat 1135 Query: 615 cagtgagctattacgcact 633 |||| |||||||||||||| Sbjct: 1134 cagtaagctattacgcact 1116 Score = 81.8 bits (41), Expect = 3e-12 Identities = 44/45 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgtt 57 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1684 tacctacccacctgtgttggtttcgggtacaggtacccttttgtt 1640 Score = 65.9 bits (33), Expect = 2e-07 Identities = 58/66 (87%), Gaps = 4/66 (6%) Strand = Plus / Minus Query: 59 aaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgccgtagcg 118 |||||| ||||||||||||||||||||||||| | ||| |||||||||||||||| | Sbjct: 1625 aaggtcattcgagcttttcctgggagtatggcgtgggt----tacttcagcgccgtagtg 1570 Query: 119 cctggt 124 |||||| Sbjct: 1569 cctggt 1564
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 513 bits (259), Expect = e-142 Identities = 311/327 (95%), Gaps = 1/327 (0%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 130209 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 130268 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 130269 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 130327 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 130328 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 130387 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130388 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 130447 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 130448 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 130507 Query: 466 agccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||| Sbjct: 130508 agccgacattctcgcttccgcttcgtc 130534 Score = 513 bits (259), Expect = e-142 Identities = 311/327 (95%), Gaps = 1/327 (0%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | ||||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 103236 tacttcagcgccgtagcgcctggtactcgaacattggctcgaggcattttctctacccct 103177 Query: 226 tcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggcta 285 ||||||||||||||| ||||||||||||| |||||| |||| |||||||||||||||||| Sbjct: 103176 tcttaccctgaaaaa-cagggtcaccttgcgtccttgaaccgataaccatctttcggcta 103118 Query: 286 acctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttg 345 ||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| Sbjct: 103117 acctagcctcctccgtccctcgggaccaacaaggggtagtacaggaatattcacctgttg 103058 Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103057 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 102998 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 102997 ttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttactca 102938 Query: 466 agccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||| Sbjct: 102937 agccgacattctcgcttccgcttcgtc 102911 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130125 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 130184 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 130185 ttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 130233 Score = 182 bits (92), Expect = 9e-43 Identities = 108/113 (95%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103320 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 103261 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103260 ttttcctgggagtatggcatcggt----tacttcagcgccgtagcgcctggta 103212 Score = 174 bits (88), Expect = 2e-40 Identities = 106/112 (94%) Strand = Plus / Plus Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| Sbjct: 130568 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagaccgcttagccc 130627 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 130628 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 130679 Score = 174 bits (88), Expect = 2e-40 Identities = 106/112 (94%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| Sbjct: 102877 cggaacgctcccctaccgatgtttttttacatcccacagcttcggcagaccgcttagccc 102818 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 102817 cgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcactcttt 102766
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 505 bits (255), Expect = e-140 Identities = 427/479 (89%), Gaps = 9/479 (1%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | |||||||| ||||||| || ||| ||||||||||||||||||||| Sbjct: 4975 tacttcagcgccgtagcgcttg-tactcggcgcttggcccgaggcattttctctacccct 5033 Query: 226 tcttaccct----gaaaaa--gcagggtcaccttgtgtccttaaacctataaccatcttt 279 ||| ||||| |||||| ||| |||||||||| |||||| |||| |||||||| ||| Sbjct: 5034 tctgaccctccctgaaaaaaggcaaggtcaccttgcgtccttgaaccgataaccattttt 5093 Query: 280 cggctaacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgac 339 ||||||||||||||||||||||||||| | |||||||| || ||||||||||||||| || Sbjct: 5094 cggctaacctagcctcctccgtccctcgggaccaacaaaggatagtacaggaatattcac 5153 Query: 340 ctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgt-gg 398 ||||||||||||||| || | ||||||||||||||||||||||||||||||| |||| || Sbjct: 5154 ctgttgtccatcgacaac-cgtttcggcctgatcttaggccctgactcaccccccgttgg 5212 Query: 399 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 458 |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| || Sbjct: 5213 acgaaccttgcggaggaacccttaggttttcggggcattggattctcaccaatgtttgcg 5272 Query: 459 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 518 |||||||||||||||||||| ||||||||||||| || || ||| ||||| |||||| | Sbjct: 5273 ttactcaagccgacattctcacttccgcttcgtccacacctgctcgcgcgggtgcttctc 5332 Query: 519 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 578 ||| | ||||||||||||||||||||| ||| || ||||||||||||||||||||||| Sbjct: 5333 tctgaaacggaacgctcccctaccgatgtttttagatatcccacagcttcggcagatcgc 5392 Query: 579 ttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||| ||||||||||||| | ||||| ||||||||||||| |||||||||||||||||| Sbjct: 5393 ttagtcccgttcatcttcggtgcaagagcgctcgatcagtaagctattacgcactcttt 5451 Score = 141 bits (71), Expect = 3e-30 Identities = 74/75 (98%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4891 tacctacctacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 4950 Query: 73 ttttcctgggagtat 87 ||||||||||||||| Sbjct: 4951 ttttcctgggagtat 4965
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 496 bits (250), Expect = e-137 Identities = 349/382 (91%) Strand = Plus / Minus Query: 256 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 315 |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 145425 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 145366 Query: 316 aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 375 |||||| ||||| |||||||| ||| |||||||||| ||||||||| ||||||||||||| Sbjct: 145365 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 145306 Query: 376 aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 435 ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 145305 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 145246 Query: 436 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgac 495 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 145245 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccac 145186 Query: 496 ccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgac 555 || ||| | | | ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 145185 acctgctcgcactggtgcttccatctggggcggaacgctcccctaccgatgttttttgac 145126 Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| |||| Sbjct: 145125 atcccacagcttcggcagaccgcttagtcccgctcatcttcggcgcaagagcgcttgatc 145066 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 145065 agtgagctattacgcactcttt 145044 Score = 496 bits (250), Expect = e-137 Identities = 349/382 (91%) Strand = Plus / Plus Query: 256 gtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaac 315 |||||| |||| ||||||| ||||||||||||||||||||||||||||||| | |||||| Sbjct: 87426 gtccttgaaccgataaccacctttcggctaacctagcctcctccgtccctcgggaccaac 87485 Query: 316 aaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctt 375 |||||| ||||| |||||||| ||| |||||||||| ||||||||| ||||||||||||| Sbjct: 87486 aaggggcagtacgggaatattaacccgttgtccatcaactacgcctctcggcctgatctt 87545 Query: 376 aggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggca 435 ||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 87546 aggacctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggca 87605 Query: 436 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgac 495 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 87606 ttggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtccac 87665 Query: 496 ccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgac 555 || ||| | | | ||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 87666 acctgctcgcactggtgcttccatctggggcggaacgctcccctaccgatgttttttgac 87725 Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||| ||||||| |||| |||||||| ||||||| ||||| |||| Sbjct: 87726 atcccacagcttcggcagaccgcttagtcccgctcatcttcggcgcaagagcgcttgatc 87785 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 87786 agtgagctattacgcactcttt 87807 Score = 119 bits (60), Expect = 1e-23 Identities = 97/109 (88%), Gaps = 4/109 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 145587 tacctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggtcgttcgagc 145528 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 121 ||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 145527 ttttcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 145483 Score = 119 bits (60), Expect = 1e-23 Identities = 97/109 (88%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 87264 tacctacccacctgtgtcggtttcgggtacaggtacccacttgtcaaaggtcgttcgagc 87323 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 121 ||||| ||||||| |||||| ||| |||||| |||||||||||||| Sbjct: 87324 ttttcttgggagtgtggcatgggt----tacttcggcgccgtagcgcct 87368 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 |||||| |||| | ||||| | |||||||||| | ||||||||||||||||||||||||| Sbjct: 145503 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 145444 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 |||||| |||| | ||||| | |||||||||| | ||||||||||||||||||||||||| Sbjct: 87348 tacttcggcgccgtagcgcctagtactcggacgttggctcgaggcattttctctacccct 87407
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 494 bits (249), Expect = e-136 Identities = 354/389 (91%) Strand = Plus / Plus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 126938 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 126997 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 126998 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 127057 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 127058 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 127117 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 127118 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 127177 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| |||||| ||| | ||||||||||||||||||||| Sbjct: 127178 cgtccacacctgctcacgctagtgcttctttctgatacggaacgctcccctaccgatgtc 127237 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 ||||||||| ||||||||||||||| | ||||| ||||||||| ||| ||| ||| ||| Sbjct: 127238 ctttgacatctcacagcttcggcagaccacttagtcccgttcattttcggcgtaagagcg 127297 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 127298 cttgatcagtgagctattacgcactcttt 127326 Score = 494 bits (249), Expect = e-136 Identities = 354/389 (91%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||| | Sbjct: 96509 accttgcgtccttgaaccgataaccatctttcggctaacctagcctcctccgtccctcgg 96450 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 96449 gaccaacaaggagtagtacaggaatattcacctgttgtccatcgactacgcctttcggcc 96390 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 96389 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 96330 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 96329 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgctt 96270 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || || ||| ||| |||||| ||| | ||||||||||||||||||||| Sbjct: 96269 cgtccacacctgctcacgctagtgcttctttctgatacggaacgctcccctaccgatgtc 96210 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 ||||||||| ||||||||||||||| | ||||| ||||||||| ||| ||| ||| ||| Sbjct: 96209 ctttgacatctcacagcttcggcagaccacttagtcccgttcattttcggcgtaagagcg 96150 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 96149 cttgatcagtgagctattacgcactcttt 96121 Score = 135 bits (68), Expect = 2e-28 Identities = 99/109 (90%), Gaps = 4/109 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126769 tacctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagc 126828 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 121 ||||| |||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 126829 ttttcttgggagtatgacatgggt----tacttcagcgccatagcgcct 126873 Score = 135 bits (68), Expect = 2e-28 Identities = 99/109 (90%), Gaps = 4/109 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 96678 tacctacccacctgtgtcggtttcgggtacaggtacccacttgttgaaggtcgttcgagc 96619 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcct 121 ||||| |||||||||| ||| ||| |||||||||||| |||||||| Sbjct: 96618 ttttcttgggagtatgacatgggt----tacttcagcgccatagcgcct 96574 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| ||||| | || ||||||| | |||||||||||||||||| |||||| Sbjct: 126853 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 126912 Query: 226 t 226 | Sbjct: 126913 t 126913 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| ||||| | || ||||||| | |||||||||||||||||| |||||| Sbjct: 96594 tacttcagcgccatagcgcctagtgctcggacgttggctcgaggcattttctccacccct 96535 Query: 226 t 226 | Sbjct: 96534 t 96534
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 458 bits (231), Expect = e-125 Identities = 351/391 (89%) Strand = Plus / Minus Query: 247 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 306 ||||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 1505 tcaccttgtatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446 Query: 307 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 366 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386 Query: 367 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 426 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326 Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 1266 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1265 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1206 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| | Sbjct: 1205 ttattttacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagag 1146 Query: 607 cgctcgatcagtgagctattacgcactcttt 637 |||| |||||||||||||||||||||||||| Sbjct: 1145 cgcttgatcagtgagctattacgcactcttt 1115 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccc 50 |||||||| |||||||||||||| |||||||| |||| Sbjct: 1651 tacctacctacctgtgtcggtttgaggtacaggcaccc 1614
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 450 bits (227), Expect = e-123 Identities = 350/391 (89%) Strand = Plus / Minus Query: 247 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 306 |||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 5538 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 5479 Query: 307 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 366 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 5478 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 5419 Query: 367 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 426 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 5418 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 5359 Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5358 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 5299 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 5298 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 5239 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| | Sbjct: 5238 ttattttacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagag 5179 Query: 607 cgctcgatcagtgagctattacgcactcttt 637 |||| |||||||||||||||||||||||||| Sbjct: 5178 cgcttgatcagtgagctattacgcactcttt 5148 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccc 50 |||||||| |||||||||||||| |||||||| |||| Sbjct: 5684 tacctacctacctgtgtcggtttgaggtacaggcaccc 5647
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 450 bits (227), Expect = e-123 Identities = 350/391 (89%) Strand = Plus / Minus Query: 247 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 306 |||||||| ||||| |||| || ||||| |||||||||| ||||||| ||||||||||| Sbjct: 1505 tcaccttgcatccttgaaccgatcaccatttttcggctaatctagccttctccgtccctc 1446 Query: 307 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 366 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1445 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1386 Query: 367 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 426 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct: 1385 cctaatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtt 1326 Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1325 ttcggggcattggattctcaccaatgtttgcgttactcaagccgacattctcgcttccgc 1266 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||| || || | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1265 ttcgtccacacctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1206 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 ||| ||||||||||||||||||||| ||||||| ||||||||||||| ||||||| | Sbjct: 1205 ttattttacatcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagag 1146 Query: 607 cgctcgatcagtgagctattacgcactcttt 637 |||| |||||||||||||||||||||||||| Sbjct: 1145 cgcttgatcagtgagctattacgcactcttt 1115 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccc 50 |||||||| |||||||||||||| |||||||| |||| Sbjct: 1651 tacctacctacctgtgtcggtttgaggtacaggcaccc 1614
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 436 bits (220), Expect = e-119 Identities = 344/383 (89%), Gaps = 3/383 (0%) Strand = Plus / Minus Query: 258 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 317 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 1481 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 1422 Query: 318 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 1421 ataagtggtacaggaatattaacctgttgtccatcgactgcgcctttcggcctcatctta 1362 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 1361 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 1302 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 496 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 1301 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 1242 Query: 497 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 554 | |||||||| |||||| | ||| || ||||||||||||||||||| |||||| Sbjct: 1241 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcttttttga 1182 Query: 555 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 614 |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 1181 catcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgat 1122 Query: 615 cagtgagctattacgcactcttt 637 ||||||||||||||||||||||| Sbjct: 1121 cagtgagctattacgcactcttt 1099 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 62 gtcgttcgagcttttcctgggagtatggcatcggttac 99 |||||||||||||||| |||||||||||||| |||||| Sbjct: 1589 gtcgttcgagcttttcttgggagtatggcataggttac 1552 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| ||||||||||||||| |||||||| Sbjct: 1639 tacctacctacctgtgtcggtttcaggtacagg 1607 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 gctcgaggcattttctctacc 222 ||||||||||||||||||||| Sbjct: 1518 gctcgaggcattttctctacc 1498
>ref|NM_195959.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0075K12.8), mRNA Length = 858 Score = 430 bits (217), Expect = e-117 Identities = 226/229 (98%) Strand = Plus / Plus Query: 43 aggtacccttttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacata 102 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 630 aggtacccctttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacata 689 Query: 103 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaattgctagtccacggggc 162 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 690 cttcagcgccgtagcgcctggtatgagcctcgtggagaagcaatggctagtccacggggc 749 Query: 163 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 tcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacc 809 Query: 223 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 271 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 ccttcttaccctgaaaaagcagggtcaccttgtgtccttaaacctataa 858
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 430 bits (217), Expect = e-117 Identities = 347/386 (89%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 258 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 316 |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| Sbjct: 137767 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 137825 Query: 317 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 137826 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 137885 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 137886 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 137945 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 496 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | Sbjct: 137946 tggattctcaccaatgtttgcgttactcaagccgacactctcgcttccgcttcgtccgca 138005 Query: 497 cccgctttcgcggttgcttc---cctctaaggcggaacgctcccctaccgatgcat--tt 551 || ||| ||| | |||||| |||| |||||||||||||||||||||||| || || Sbjct: 138006 cctgctcgcgctggtgcttccctcctccgaggcggaacgctcccctaccgatgtattgtt 138065 Query: 552 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 611 |||||||||||||||||||||| ||||||| |||||||||| || ||||| | ||||| Sbjct: 138066 cgacatcccacagcttcggcagaccgcttagtcccgttcatcctcggcgcaggagcgctt 138125 Query: 612 gatcagtgagctattacgcactcttt 637 ||||||||||||| |||||||||||| Sbjct: 138126 gatcagtgagctactacgcactcttt 138151 Score = 430 bits (217), Expect = e-117 Identities = 347/386 (89%), Gaps = 7/386 (1%) Strand = Plus / Minus Query: 258 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgt-accaaca 316 |||| |||| |||||||||| ||||||||||| |||||||||||||| |||| |||||| Sbjct: 84110 ccttgaaccgataaccatctctcggctaacctggcctcctccgtccc-ccgtgaccaacg 84052 Query: 317 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 | |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 84051 atgggtagtacaggaatattcgcctgttgtccatcgactacgcctctcggcctgatctta 83992 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 83991 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttgggttttcggggcat 83932 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 496 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| | Sbjct: 83931 tggattctcaccaatgtttgcgttactcaagccgacactctcgcttccgcttcgtccgca 83872 Query: 497 cccgctttcgcggttgcttc---cctctaaggcggaacgctcccctaccgatgcat--tt 551 || ||| ||| | |||||| |||| |||||||||||||||||||||||| || || Sbjct: 83871 cctgctcgcgctggtgcttccctcctccgaggcggaacgctcccctaccgatgtattgtt 83812 Query: 552 tgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctc 611 |||||||||||||||||||||| ||||||| |||||||||| || ||||| | ||||| Sbjct: 83811 cgacatcccacagcttcggcagaccgcttagtcccgttcatcctcggcgcaggagcgctt 83752 Query: 612 gatcagtgagctattacgcactcttt 637 ||||||||||||| |||||||||||| Sbjct: 83751 gatcagtgagctactacgcactcttt 83726 Score = 113 bits (57), Expect = 7e-22 Identities = 97/110 (88%), Gaps = 4/110 (3%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| || Sbjct: 137589 tacctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggtcgttcgggc 137648 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 122 ||||| ||||||| |||||| || |||||||||||||||||||||| Sbjct: 137649 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 137694 Score = 113 bits (57), Expect = 7e-22 Identities = 97/110 (88%), Gaps = 4/110 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||| ||||||||||||| | ||||||||||||||| || Sbjct: 84288 tacctacccacctgtgtcggtttcaggtacaggtacccactcgttgaaggtcgttcgggc 84229 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctg 122 ||||| ||||||| |||||| || |||||||||||||||||||||| Sbjct: 84228 ttttcttgggagtgtggcatgagt----tacttcagcgccgtagcgcctg 84183 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Plus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 224 ||||||||||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 137673 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 137731 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccc 224 ||||||||||| | ||||| || ||||||||| | ||||||||||||| |||||||||| Sbjct: 84204 tacttcagcgccgtagcgcctgctactcggacgttggctcgaggcattctctctacccc 84146
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 426 bits (215), Expect = e-116 Identities = 347/391 (88%) Strand = Plus / Minus Query: 247 tcaccttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctc 306 ||||||||| ||||| |||| || ||||| ||||||| || ||||||| ||||||||||| Sbjct: 1500 tcaccttgtatccttgaaccgatcaccatttttcggccaatctagccttctccgtccctc 1441 Query: 307 cgtaccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcgg 366 | || || ||||||| ||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 1440 gggacaaataaggggtggtacaggaatattcgcctgttgtccatcgactgcgcctttcgg 1381 Query: 367 cctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtt 426 ||| |||||||||||||||| ||||||||||||||||||||||||||||| |||| |||| Sbjct: 1380 cctaatcttaggccctgactaaccctccgtggacgaaccttgcggaggaacccttaggtt 1321 Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1320 ttcggggcattggattctcaccaatgtttccgttactcaagccgacattctcgcttccgc 1261 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||| || | | || | | | |||||| | ||| |||||||||||||||||||||| Sbjct: 1260 ttcgtccacatctgtttacactgatgcttctccctagagcggaacgctcccctaccgatg 1201 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 ||||| |||||||||||||||||||| ||||||| ||| ||||||||| |||| || | Sbjct: 1200 tattttagcatcccacagcttcggcagaccgcttagtcccattcatcttcggcgcgagag 1141 Query: 607 cgctcgatcagtgagctattacgcactcttt 637 |||| |||||||||||||||||||||||||| Sbjct: 1140 cgcttgatcagtgagctattacgcactcttt 1110 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccc 50 |||||||| |||||||||||||| |||||||| |||| Sbjct: 1646 tacctacctacctgtgtcggttttaggtacaggcaccc 1609
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 422 bits (213), Expect = e-115 Identities = 213/213 (100%) Strand = Plus / Minus Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526961 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 33526902 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526901 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 33526842 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526841 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 33526782 Query: 607 cgctcgatcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||||||||| Sbjct: 33526781 cgctcgatcagtgagctattacgcactctttaa 33526749 Score = 174 bits (88), Expect = 2e-40 Identities = 91/92 (98%) Strand = Plus / Minus Query: 548 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 607 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 527960 attttgacatcccacagctttggcagatcgcttagccccgttcatcttcagcgcaagggc 527901 Query: 608 gctcgatcagtgagctattacgcactctttaa 639 |||||||||||||||||||||||||||||||| Sbjct: 527900 gctcgatcagtgagctattacgcactctttaa 527869 Score = 141 bits (71), Expect = 3e-30 Identities = 130/147 (88%), Gaps = 2/147 (1%) Strand = Plus / Plus Query: 396 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 455 |||||||||||||||||||||||| |||||||||| ||||||||||||| ||| |||||| Sbjct: 1076634 tggacgaaccttgcggaggaaaccctgggttttcgaggcattggattcttaccgatgttt 1076693 Query: 456 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 515 | ||||||||||| ||||||||| | |||||||| |||| ||| |||| | ||| |||| Sbjct: 1076694 t-gttactcaagcagacattctcacatccgcttcatcga-ccctacttttgtggtggctt 1076751 Query: 516 ccctctaaggcggaacgctcccctacc 542 |||||||||| ||||| |||||||||| Sbjct: 1076752 ccctctaaggtggaacactcccctacc 1076778 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 574 atcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||||||||| |||||||||||||||||||| |||||||| Sbjct: 9371911 atcgcttagccctgttcatcttcagcgcaagggtgctcgatc 9371952 Score = 58.0 bits (29), Expect = 4e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Plus Query: 458 gttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttcc 517 ||||||| |||| |||||||| ||||| ||| |||||||| ||||| |||||||||||| Sbjct: 1076806 gttactccagccaacattctcacttccactttgtcgaccct-gcttttgcggttgcttcc 1076864 Query: 518 ctctaaggcggaacgctcccctaccgatg 546 | |||||| |||| ||| || ||||||| Sbjct: 1076865 ttttaaggcagaacactcaccaaccgatg 1076893 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 439 gattctcaccaatgttttcgttactcaa 466 |||||||||||||||||||||||||||| Sbjct: 33498146 gattctcaccaatgttttcgttactcaa 33498173 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 ctacgcctttcggcctgatc 373 |||||||||||||||||||| Sbjct: 41814877 ctacgcctttcggcctgatc 41814858
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 422 bits (213), Expect = e-115 Identities = 213/213 (100%) Strand = Plus / Minus Query: 427 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72158 ttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgc 72099 Query: 487 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72098 ttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg 72039 Query: 547 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 606 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72038 cattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaaggg 71979 Query: 607 cgctcgatcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||||||||| Sbjct: 71978 cgctcgatcagtgagctattacgcactctttaa 71946 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 439 gattctcaccaatgttttcgttactcaa 466 |||||||||||||||||||||||||||| Sbjct: 43343 gattctcaccaatgttttcgttactcaa 43370
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 420 bits (212), Expect = e-114 Identities = 342/383 (89%), Gaps = 3/383 (0%) Strand = Plus / Plus Query: 258 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 317 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 123784 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 123843 Query: 318 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 123844 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 123903 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 123904 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 123963 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 496 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 123964 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 124023 Query: 497 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 554 | |||||||| |||||| | ||| || ||||||||||||||||||| | ||| Sbjct: 124024 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcaaaaatga 124083 Query: 555 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 614 |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 124084 catcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgat 124143 Query: 615 cagtgagctattacgcactcttt 637 ||||||||||||||||||||||| Sbjct: 124144 cagtgagctattacgcactcttt 124166 Score = 420 bits (212), Expect = e-114 Identities = 342/383 (89%), Gaps = 3/383 (0%) Strand = Plus / Minus Query: 258 ccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaa 317 |||| |||| ||||||||| |||||||||| |||||| ||||||||||| | |||||||| Sbjct: 96082 ccttgaaccgataaccatccttcggctaacttagccttctccgtccctcgggaccaacaa 96023 Query: 318 ggg-gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 || ||||||||||||| |||||||||||||||||| ||||||||||||| |||||| Sbjct: 96022 ataagtggtacaggaatattcacctgttgtccatcgactgcgcctttcggcctcatctta 95963 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 95962 ggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttttcggggcat 95903 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacc 496 ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||| || Sbjct: 95902 tggattctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccaca 95843 Query: 497 cccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg--cattttga 554 | |||||||| |||||| | ||| || ||||||||||||||||||| | ||| Sbjct: 95842 tctgctttcgctaatgcttctccctacagcagaacgctcccctaccgatgtcaaaaatga 95783 Query: 555 catcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgat 614 |||||||||||||||||||| ||||||| ||||||||||||| ||||||| ||||||||| Sbjct: 95782 catcccacagcttcggcagaccgcttagtcccgttcatcttcggcgcaagagcgctcgat 95723 Query: 615 cagtgagctattacgcactcttt 637 ||||||||||||||||||||||| Sbjct: 95722 cagtgagctattacgcactcttt 95700 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 62 gtcgttcgagcttttcctgggagtatggcatcggttac 99 |||||||||||||||| |||||||||||||| |||||| Sbjct: 123676 gtcgttcgagcttttcttgggagtatggcataggttac 123713 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 62 gtcgttcgagcttttcctgggagtatggcatcggttac 99 |||||||||||||||| |||||||||||||| |||||| Sbjct: 96190 gtcgttcgagcttttcttgggagtatggcataggttac 96153 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| ||||||||||||||| |||||||| Sbjct: 123626 tacctacctacctgtgtcggtttcaggtacagg 123658 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| ||||||||||||||| |||||||| Sbjct: 96240 tacctacctacctgtgtcggtttcaggtacagg 96208 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 202 gctcgaggcattttctctacc 222 ||||||||||||||||||||| Sbjct: 123747 gctcgaggcattttctctacc 123767 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 202 gctcgaggcattttctctacc 222 ||||||||||||||||||||| Sbjct: 96119 gctcgaggcattttctctacc 96099
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 400 bits (202), Expect = e-108 Identities = 325/364 (89%), Gaps = 4/364 (1%) Strand = Plus / Minus Query: 278 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 335 |||||||| | |||||||||||||||||| | || |||||||||||||||||||| | Sbjct: 1577 ttcggctagcttagcctcctccgtccctcttattgccgacaaggggtagtacaggaatct 1518 Query: 336 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 395 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1517 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1458 Query: 396 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 455 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1457 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1398 Query: 456 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 515 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1397 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttacactgatgctt 1338 Query: 516 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 573 | | | ||||||||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 1337 ctcccgtttgcggaacgctcccctaccgatgccctaatggacatcccacagcttcggcag 1278 Query: 574 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcact 633 | ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 1277 accgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcact 1218 Query: 634 cttt 637 |||| Sbjct: 1217 cttt 1214 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 14 acctacccacctgtgtcggtttcgggtacaggtacc 49 |||||||||||||||||||||||||||||||||||| Sbjct: 1832 acctacccacctgtgtcggtttcgggtacaggtacc 1797
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 387 bits (195), Expect = e-104 Identities = 195/195 (100%) Strand = Plus / Minus Query: 445 caccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgcttt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1109 caccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgcttt 1050 Query: 505 cgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 cgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacag 990 Query: 565 cttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagcta 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 cttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagcta 930 Query: 625 ttacgcactctttaa 639 ||||||||||||||| Sbjct: 929 ttacgcactctttaa 915
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 385 bits (194), Expect = e-103 Identities = 323/364 (88%), Gaps = 4/364 (1%) Strand = Plus / Minus Query: 278 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 335 |||||||| | |||||||||||||||||| | || | |||| ||||||||||||| | Sbjct: 1460 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1401 Query: 336 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 395 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1400 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1341 Query: 396 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 455 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1340 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1281 Query: 456 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 515 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1280 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttgcactgatgctt 1221 Query: 516 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 573 | | || ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1220 ctcccttttgcggaacgctcccctaccgatgccctaacggacatcccacagcttcggcag 1161 Query: 574 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcact 633 | ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 1160 accgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcact 1101 Query: 634 cttt 637 |||| Sbjct: 1100 cttt 1097 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||||||||||||||||||||||||||||||||||| Sbjct: 1695 tacctacccacctgtgtcggtttcgggtacaggtac 1660
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 385 bits (194), Expect = e-103 Identities = 323/364 (88%), Gaps = 4/364 (1%) Strand = Plus / Minus Query: 278 ttcggctaacctagcctcctccgtccctccg--taccaacaaggggtagtacaggaatat 335 |||||||| | |||||||||||||||||| | || | |||| ||||||||||||| | Sbjct: 1473 ttcggctagcttagcctcctccgtccctcttattgccgataaggagtagtacaggaatct 1414 Query: 336 tgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccg 395 |||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||| Sbjct: 1413 tgacctgttgtccatcgactgcgccgttcggcatgatcttaggccctgactcaccctccg 1354 Query: 396 tggacgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttt 455 ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1353 tggacgagccttgcggaggaacccttgggttttcggggcattggattctcaccaatgttt 1294 Query: 456 tcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgctt 515 |||||||||||||||||||||| ||||||||||||| || || | || | | | ||||| Sbjct: 1293 gcgttactcaagccgacattctcacttccgcttcgtccacacctgtttgcactgatgctt 1234 Query: 516 ccctctaaggcggaacgctcccctaccgatgcatt--ttgacatcccacagcttcggcag 573 | | || ||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 1233 ctcccttttgcggaacgctcccctaccgatgccctaacggacatcccacagcttcggcag 1174 Query: 574 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcact 633 | ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 1173 accgcttagtcccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgcact 1114 Query: 634 cttt 637 |||| Sbjct: 1113 cttt 1110 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||||||||||||||||||||||||||||||||||| Sbjct: 1708 tacctacccacctgtgtcggtttcgggtacaggtac 1673
>dbj|AK058625.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C02, full insert sequence Length = 425 Score = 381 bits (192), Expect = e-102 Identities = 201/204 (98%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 204 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 145 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 144 ttttcctgggagtatggcatgggttacatacttcagcgccgtagcgcctggtatgagcct 85 Query: 133 cgtggagaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtact 192 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84 cgtggagaagcaatggctagtccacggggctcatacttcagcgctgcagcgcttggtact 25 Query: 193 cggacctcggctcgaggcattttc 216 |||||||||||||||||||||||| Sbjct: 24 cggacctcggctcgaggcattttc 1
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 373 bits (188), Expect = e-100 Identities = 245/264 (92%) Strand = Plus / Minus Query: 374 ttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcgggg 433 ||||||| ||||||||||||||||||||||||||||||||||| |||| | |||| |||| Sbjct: 1372 ttaggccttgactcaccctccgtggacgaaccttgcggaggaacccttagtttttggggg 1313 Query: 434 cattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcg 493 |||| ||||||||||||||||| |||||||||||| |||||| |||||||||||||||| Sbjct: 1312 cattagattctcaccaatgtttgcgttactcaagcggacattttcgcttccgcttcgtcc 1253 Query: 494 acccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttg 553 |||| ||| ||||||||||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1252 acccttgctggcgcggttgcttccctttaaggcggaacgctcccctacggatgcattttt 1193 Query: 554 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 613 ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1192 acatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcgctcga 1133 Query: 614 tcagtgagctattacgcactcttt 637 |||||||||||||||||||||||| Sbjct: 1132 tcagtgagctattacgcactcttt 1109 Score = 174 bits (88), Expect = 2e-40 Identities = 107/113 (94%), Gaps = 4/113 (3%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 1626 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggta 125 |||||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 1625 ttttcctgggagtatggcatgggt----tacttcagcgccgtatcgcctggta 1577 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Minus Query: 166 tacttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccct 225 ||||||||||| | | ||| ||||||||| || | ||||||||||||||||||||||||| Sbjct: 1601 tacttcagcgccgtatcgcctggtactcgaacattggctcgaggcattttctctacccct 1542 Query: 226 tcttaccctgaaaaagcaggg 246 ||||||||||||||| ||||| Sbjct: 1541 tcttaccctgaaaaaccaggg 1521
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 369 bits (186), Expect = 8e-99 Identities = 341/390 (87%), Gaps = 2/390 (0%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| || Sbjct: 4519 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 4461 Query: 309 tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 367 || || || | | ||||||||||||||||| ||| |||||||| | ||||||||||| Sbjct: 4460 tagttaataaagaatggtacaggaatattgaccagttatccatcgattgcgcctttcggc 4401 Query: 368 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 427 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 4400 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 4341 Query: 428 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 487 |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| Sbjct: 4340 tcggggcattggattcccaccaatgtttgcgttactcaagccgacattctcacttctgct 4281 Query: 488 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 547 ||||| || | | |||| | | |||||| ||||| || ||||||||||||||||||| Sbjct: 4280 tcgtccacatctgttttcactgatgcttcactctatagcagaacgctcccctaccgatgt 4221 Query: 548 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 607 | || ||||||||||| ||||||| ||||||||| ||||||||||||| ||||||| || Sbjct: 4220 acttaaacatcccacagtttcggcaaatcgcttagtcccgttcatcttcggcgcaagagc 4161 Query: 608 gctcgatcagtgagctattacgcactcttt 637 ||| |||||||||||||||||||||||||| Sbjct: 4160 gcttgatcagtgagctattacgcactcttt 4131 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||||||||| ||||||||| Sbjct: 4667 tacctacccacctgtgtcggttttgggtacagg 4635
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 359 bits (181), Expect = 7e-96 Identities = 338/389 (86%), Gaps = 1/389 (0%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 ||||||| |||||||||| ||||||||| ||||| |||| |||||| ||||||||||| | Sbjct: 1484 accttgtatccttaaaccgataaccatcattcggataacttagccttctccgtccctcag 1425 Query: 309 taccaacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcc 368 || || | | ||||||||||||| ||| ||| |||||||| | ||||| |||||| Sbjct: 1424 agttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctgtcggcc 1365 Query: 369 tgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggtttt 428 | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 1364 tcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggtttt 1305 Query: 429 cggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 1304 cggggcattggattctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 1245 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| || | | |||| | | |||||| ||||| || ||||||||||||||||||| | Sbjct: 1244 cgtccacatctgttttcactggtgcttcactctatagcagaacgctcccctaccgatgta 1185 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 || ||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||| ||| Sbjct: 1184 -ttaaacatcccacagtttcggcaaatcgcttagtcccattcatcttcggcgcaagagcg 1126 Query: 609 ctcgatcagtgagctattacgcactcttt 637 || |||||||||||||||||||||||||| Sbjct: 1125 cttgatcagtgagctattacgcactcttt 1097 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||||||||| ||||||||| Sbjct: 1633 tacctacccacctgtgtcggttttgggtacagg 1601
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 345 bits (174), Expect = 1e-91 Identities = 338/390 (86%), Gaps = 2/390 (0%) Strand = Plus / Minus Query: 249 accttgtgtccttaaacctataaccatctttcggctaacctagcctcctccgtccctccg 308 ||||||| |||||||||| ||||||||| ||||| |||| |||||| || ||||||| || Sbjct: 1485 accttgtatccttaaaccgataaccatcattcggataacttagccttcttcgtccct-cg 1427 Query: 309 tacc-aacaaggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggc 367 || || || | | ||||||||||||| ||| ||| |||||||| | ||||||||||| Sbjct: 1426 tagttaataaagaatggtacaggaatattaacccgttatccatcgattgcgcctttcggc 1367 Query: 368 ctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttt 427 || |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1366 ctcatcttaggccctgactcaccctccgtggacgaaccttgcggaggaacccttaggttt 1307 Query: 428 tcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgct 487 |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||| ||| Sbjct: 1306 tcggggcattggattcccaccaatgtttgcgttactcaagccgacattctcacttctgct 1247 Query: 488 tcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgc 547 ||||| || | | |||| | | |||||| |||| || ||||||||||||||||||| Sbjct: 1246 tcgtccacatctgttttcactgatgcttcaatctatagcagaacgctcccctaccgatgt 1187 Query: 548 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 607 | || ||||||||||| ||||||| ||||||||| ||| ||||||||| ||||||| || Sbjct: 1186 acttaaacatcccacagtttcggcaaatcgcttagtcccattcatcttcggcgcaagagc 1127 Query: 608 gctcgatcagtgagctattacgcactcttt 637 ||| |||||||||||||||||||||||||| Sbjct: 1126 gcttgatcagtgagctattacgcactcttt 1097 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||||||||| ||||||||| Sbjct: 1633 tacctacccacctgtgtcggttttgggtacagg 1601
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 325 bits (164), Expect = 1e-85 Identities = 308/356 (86%), Gaps = 10/356 (2%) Strand = Plus / Minus Query: 284 taacctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgt 343 ||||||||||| ||||||||||| ||| | ||||||||||||||||||| |||| | Sbjct: 1490 taacctagcctactccgtccctcggta-----agggggtagtacaggaatattaacctat 1436 Query: 344 tgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaa 403 |||||||| |||| |||||| | |||||||||| ||||||||||||| |||||||||| Sbjct: 1435 tgtccatcaactaaacctttcagtatgatcttaggacctgactcaccctacgtggacgaa 1376 Query: 404 ccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttact 463 ||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1375 ccttgcgaaggaacccttaggttttcggggcattggattctcaccaatgtttgcgttact 1316 Query: 464 caagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaa 523 ||||||||||||||| |||| ||||| || ||| | ||| || | ||||||||| ||| Sbjct: 1315 caagccgacattctcacttctgcttcatccaccactgctcgtgcaggtgcttccctataa 1256 Query: 524 ggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagc 583 ||| ||||||||||||||||||| | |||||||||||||||||| ||||||||| Sbjct: 1255 ggcagaacgctcccctaccgatg-----ttacatcccacagcttcggcggatcgcttatt 1201 Query: 584 cccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 ||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 1200 cccgttcatattcggcgcaagagcgctcgatcagttagctattacgcactctttaa 1145 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1656 tacctacctacctgtgttggtttcgggtacaggtaccctttt 1615
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 325 bits (164), Expect = 1e-85 Identities = 282/321 (87%), Gaps = 4/321 (1%) Strand = Plus / Minus Query: 321 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 380 ||||||||||||||| |||||||||||||| | | | || || || || | |||||| | Sbjct: 1376 gtagtacaggaatataaacctgttgtccatcaattgcaccatttggtctcaccttaggtc 1317 Query: 381 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 440 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| Sbjct: 1316 ctgactcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattgga 1257 Query: 441 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 500 ||||||||||||||| |||||||||||||||||||||| ||||||||||||| || | | Sbjct: 1256 ttctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtccacatctg 1197 Query: 501 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcatt----ttgaca 556 ||| ||| |||||| ||||||||||||||||||||||||||| || | |||| Sbjct: 1196 cttacgctaatgcttctatctaaggcggaacgctcccctaccgatatcttataatagaca 1137 Query: 557 tcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatca 616 |||||||||||||||||| ||||||| ||| ||||||||| ||||||| ||||||||||| Sbjct: 1136 tcccacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctcgatca 1077 Query: 617 gtgagctattacgcactcttt 637 ||||||||||||||||||||| Sbjct: 1076 gtgagctattacgcactcttt 1056 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||||||||||||||||||||||| ||||||||||| Sbjct: 1563 tacctacccacctgtgtcggtttcaggtacaggtac 1528
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 299 bits (151), Expect = 6e-78 Identities = 278/320 (86%), Gaps = 4/320 (1%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 1416 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 1357 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 1356 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 1297 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 501 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 1296 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 1237 Query: 502 tttcgcggttgcttccctctaaggcggaacgctcccctaccga----tgcattttgacat 557 || ||| | |||||| | ||| |||||||||||||||||||| | ||| ||||| Sbjct: 1236 ttacgctgatgcttcaccctatagcggaacgctcccctaccgatatctccatagagacat 1177 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 | |||||||||||||| ||||||| ||||| ||| ||| ||||||| ||||| || ||| Sbjct: 1176 ctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttgaccag 1117 Query: 618 tgagctattacgcactcttt 637 |||||||||||||||||||| Sbjct: 1116 tgagctattacgcactcttt 1097 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||||||| ||||||||||||||||||||||||||| Sbjct: 1637 tacctacctacctgtgtcggtttcgggtacaggtac 1602
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 299 bits (151), Expect = 6e-78 Identities = 278/320 (86%), Gaps = 4/320 (1%) Strand = Plus / Plus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 114246 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 114305 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 114306 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 114365 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 501 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 114366 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 114425 Query: 502 tttcgcggttgcttccctctaaggcggaacgctcccctaccga----tgcattttgacat 557 || ||| | |||||| | ||| |||||||||||||||||||| | ||| ||||| Sbjct: 114426 ttacgctgatgcttcaccctatagcggaacgctcccctaccgatatctccatagagacat 114485 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 | |||||||||||||| ||||||| ||||| ||| ||| ||||||| ||||| || ||| Sbjct: 114486 ctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttgaccag 114545 Query: 618 tgagctattacgcactcttt 637 |||||||||||||||||||| Sbjct: 114546 tgagctattacgcactcttt 114565 Score = 299 bits (151), Expect = 6e-78 Identities = 278/320 (86%), Gaps = 4/320 (1%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| |||||||||||||||| ||||||||||||||| |||||| || Sbjct: 87742 tagtacaggaatattaacctgttgtccatcgaatacgcctttcggcctttccttaggtcc 87683 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| ||||||||||||||| ||||||||||||| |||| ||||||||||||||||||| Sbjct: 87682 tgactaaccctccgtggacgagccttgcggaggaacccttaggttttcggggcattggat 87623 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 501 ||||||||||||||||| ||||||||||||||||||| ||||||||||||| || | | Sbjct: 87622 tctcaccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacatctac 87563 Query: 502 tttcgcggttgcttccctctaaggcggaacgctcccctaccga----tgcattttgacat 557 || ||| | |||||| | ||| |||||||||||||||||||| | ||| ||||| Sbjct: 87562 ttacgctgatgcttcaccctatagcggaacgctcccctaccgatatctccatagagacat 87503 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 | |||||||||||||| ||||||| ||||| ||| ||| ||||||| ||||| || ||| Sbjct: 87502 ctcacagcttcggcaggccgcttagtcccgtccattttcggcgcaagagcgcttgaccag 87443 Query: 618 tgagctattacgcactcttt 637 |||||||||||||||||||| Sbjct: 87442 tgagctattacgcactcttt 87423 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||||||| ||||||||||||||||||||||||||| Sbjct: 114026 tacctacctacctgtgtcggtttcgggtacaggtac 114061 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||||||| ||||||||||||||||||||||||||| Sbjct: 87962 tacctacctacctgtgtcggtttcgggtacaggtac 87927
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 289 bits (146), Expect = 6e-75 Identities = 277/320 (86%), Gaps = 3/320 (0%) Strand = Plus / Minus Query: 321 gtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggcc 380 |||||||||||||||| ||||||| ||||||||||||||| || ||| | | |||||| Sbjct: 1380 gtagtacaggaatattaacctgttatccatcgactacgccgtttggctttaccttaggtt 1321 Query: 381 ctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattgga 440 |||||||||||| || ||||||||||| || ||||| |||||||||||||||||| |||| Sbjct: 1320 ctgactcaccctacgcggacgaaccttccgtaggaatccttgggttttcggggcactgga 1261 Query: 441 ttctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccg 500 ||||||||| ||||| |||||||||||||||||||||| ||||||||| ||| || || Sbjct: 1260 ttctcaccagtgtttgcgttactcaagccgacattctcacttccgctttgtccacattcg 1201 Query: 501 ctttcgcggttgcttccctctaaggcggaacgctcccctaccgatg---cattttgacat 557 ||| ||| |||||| |||| |||||||||||||||||||||| |||| |||| Sbjct: 1200 cttacgctagtgcttcaacctaatgcggaacgctcccctaccgatgttatatttaaacat 1141 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 | ||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||||||||| Sbjct: 1140 ctcacagcttcggcagaccgcttagtcccattcatcttcggcgcaagagcgctcgatcag 1081 Query: 618 tgagctattacgcactcttt 637 |||||||||||||||||||| Sbjct: 1080 tgagctattacgcactcttt 1061 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 14 acctacccacctgtgtcggtttcgggtacag 44 |||||||||||||||||||||| ||||||| Sbjct: 1576 acctacccacctgtgtcggttttaggtacag 1546
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 283 bits (143), Expect = 3e-73 Identities = 243/270 (90%), Gaps = 6/270 (2%) Strand = Plus / Minus Query: 374 ttaggccctgactcaccctccgtggacgaacctt-gcggaggaaaccttgggttttcggg 432 ||||||| |||||||||||||||||||||||||| | ||||||| | || |||||||||| Sbjct: 1401 ttaggccttgactcaccctccgtggacgaacctttggggaggaacctttaggttttcggg 1342 Query: 433 gcattggattctcaccaa-tgtttt-cgttactcaagccgacattctcgctt-ccgcttc 489 ||||| |||||||||||| |||||| ||||||||||||||||||||| | || ||| ||| Sbjct: 1341 gcattagattctcaccaaatgttttgcgttactcaagccgacattcttggtttccgtttc 1282 Query: 490 gtcgacccccgctttcgcg--gttgcttccctctaaggcggaacgctcccctaccgatgc 547 ||| | |||| |||||| | || |||| | ||||||||||||||||||||||||||| Sbjct: 1281 gtccaaccccttgttcgcgcgggtgtttccttttaaggcggaacgctcccctaccgatgc 1222 Query: 548 attttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggc 607 ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1221 atttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagc 1162 Query: 608 gctcgatcagtgagctattacgcactcttt 637 |||||||||||||||||||||||||||||| Sbjct: 1161 gctcgatcagtgagctattacgcactcttt 1132 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 |||||||||||||||||||||||| |||| | |||||||||| Sbjct: 1731 tacctacccacctgtgtcggtttctggtaaaagtaccctttt 1690
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 272 bits (137), Expect = 1e-69 Identities = 272/316 (86%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| Sbjct: 189405 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 189346 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 189345 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 189286 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||| |||| ||||||||||||||||||| | || ||| || ||||||| Sbjct: 189285 tcaccaatgttttcgctacttaagccgacattctcgcttctgttttgtccacacccgctt 189226 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 189225 tcgctaatgcttcaacctaatacagaacgctcccctaccgatg--tataaacatcccaca 189168 Query: 564 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 623 ||||||||| || ||||| ||||||||| ||| ||||| | | || || ||||||||| Sbjct: 189167 gcttcggcaaattacttagtcccgttcattttcggcgcaggatcacttgaccagtgagct 189108 Query: 624 attacgcactctttaa 639 |||||||||||||||| Sbjct: 189107 attacgcactctttaa 189092 Score = 272 bits (137), Expect = 1e-69 Identities = 272/316 (86%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| |||||||||||||| |||| |||| ||||||||||| Sbjct: 150962 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggccctg 150903 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 150902 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 150843 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||| |||| ||||||||||||||||||| | || ||| || ||||||| Sbjct: 150842 tcaccaatgttttcgctacttaagccgacattctcgcttctgttttgtccacacccgctt 150783 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 150782 tcgctaatgcttcaacctaatacagaacgctcccctaccgatg--tataaacatcccaca 150725 Query: 564 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 623 ||||||||| || ||||| ||||||||| ||| ||||| | | || || ||||||||| Sbjct: 150724 gcttcggcaaattacttagtcccgttcattttcggcgcaggatcacttgaccagtgagct 150665 Query: 624 attacgcactctttaa 639 |||||||||||||||| Sbjct: 150664 attacgcactctttaa 150649 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacaggta 47 |||| |||||||||||||| ||||||||||| Sbjct: 189623 tacctacctgtgtcggtttagggtacaggta 189593 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacagg 45 |||| |||||||||||||| ||||||||| Sbjct: 151180 tacctacctgtgtcggtttagggtacagg 151152
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 264 bits (133), Expect = 3e-67 Identities = 196/217 (90%) Strand = Plus / Minus Query: 327 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 386 |||||||||| ||||| | ||||||||||||||||||||||| |||||||| ||||||| Sbjct: 1408 caggaatattaacctgatagccatcgactacgcctttcggccttatcttaggacctgact 1349 Query: 387 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 446 |||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||||| Sbjct: 1348 caccctccgtggacgagccttgcggaggaacccttagggtttcggggcattggattctca 1289 Query: 447 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcg 506 |||||||||||| ||||||||||||||||||| ||||||||||||| || || ||||||| Sbjct: 1288 ccaatgttttcgctactcaagccgacattctcacttccgcttcgtccacacctgctttcg 1229 Query: 507 cggttgcttccctctaaggcggaacgctcccctaccg 543 | | |||||| | ||| ||||||||||||||||||| Sbjct: 1228 ctgatgcttcaccctagagcggaacgctcccctaccg 1192 Score = 75.8 bits (38), Expect = 2e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||| |||||||||| ||||||| ||||||| | ||| |||| || ||||| || ||||| Sbjct: 1167 cacaacttcggcagaccgcttagtcccgttcgttttcggcgcgagagcgcttgaccagtg 1108 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1107 agctattacgcactcttt 1090 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 cggctaacctagcctcctccgtccctc 306 |||||||||||||||||| |||||||| Sbjct: 1455 cggctaacctagcctccttcgtccctc 1429 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 ||||| ||||||||||||||||| ||||||||| Sbjct: 1603 tacctccccacctgtgtcggtttatggtacaggt 1570
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 258 bits (130), Expect = 2e-65 Identities = 253/294 (86%), Gaps = 5/294 (1%) Strand = Plus / Minus Query: 346 tccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacc 405 |||||||||||||| |||| |||| |||||| |||||||||||||||| ||||||||| Sbjct: 2936 tccatcgactacgcttttcagcctcgccttaggtcctgactcaccctccgcggacgaacc 2877 Query: 406 ttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactca 465 || | ||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2876 ttccagaggaaaccttaggttttcggggcattggattctcaccaatgttttcgctactca 2817 Query: 466 agccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccctctaagg 525 ||||||||||||| |||| |||||||| || ||||||| ||| |||||| ||||| | Sbjct: 2816 agccgacattctcacttctgcttcgtccacacccgcttacgctaatgcttcaatctaatg 2757 Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 | |||||||||||||||||| ||| ||||||||||||||||| || |||||| || Sbjct: 2756 cagaacgctcccctaccgataaatt-----atcccacagcttcggcaaattgcttagtcc 2702 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 ||||||| ||| ||||| | | || || ||||||||||||||||||||||||| Sbjct: 2701 cgttcattttcggcgcaggatcacttgaccagtgagctattacgcactctttaa 2648 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| |||||||||||||||||||||||| Sbjct: 3180 tacctacctacctgtgtcggtttcgggtacagg 3148
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 256 bits (129), Expect = 8e-65 Identities = 270/316 (85%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| |||||||||||||| |||| |||| |||||| |||| Sbjct: 190328 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 190269 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 190268 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 190209 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||| |||| |||||||||||||| |||| | || ||| || ||||||| Sbjct: 190208 tcaccaatgttttcgctacttaagccgacattctcacttctgttttgtccacacccgctt 190149 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 190148 tcgctaatgcttcaaactaatacagaacgctcccctaccgatg--tataaacatcccaca 190091 Query: 564 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 623 ||||||||| || ||||| ||||||||| ||| ||||| | | || || ||||||||| Sbjct: 190090 gcttcggcaaattacttagtcccgttcattttcggcgcaggatcacttgaccagtgagct 190031 Query: 624 attacgcactctttaa 639 |||||||||||||||| Sbjct: 190030 attacgcactctttaa 190015 Score = 256 bits (129), Expect = 8e-65 Identities = 270/316 (85%), Gaps = 2/316 (0%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| |||||||||||||| |||| |||| |||||| |||| Sbjct: 151755 gtacaggaatattaacctgttatccatcgactacgcttttcagcctcgccttaggtcctg 151696 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 |||||||||||| ||||||||||| |||||||| |||| ||||||||||||||||||||| Sbjct: 151695 actcaccctccgcggacgaaccttccggaggaatccttaggttttcggggcattggattc 151636 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||| |||| |||||||||||||| |||| | || ||| || ||||||| Sbjct: 151635 tcaccaatgttttcgctacttaagccgacattctcacttctgttttgtccacacccgctt 151576 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 |||| |||||| |||| | ||||||||||||||||||| | | |||||||||| Sbjct: 151575 tcgctaatgcttcaaactaatacagaacgctcccctaccgatg--tataaacatcccaca 151518 Query: 564 gcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagct 623 ||||||||| || ||||| ||||||||| ||| ||||| | | || || ||||||||| Sbjct: 151517 gcttcggcaaattacttagtcccgttcattttcggcgcaggatcacttgaccagtgagct 151458 Query: 624 attacgcactctttaa 639 |||||||||||||||| Sbjct: 151457 attacgcactctttaa 151442 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| |||||||||||||| ||||||||| Sbjct: 190550 tacctacctacctgtgtcggtttagggtacagg 190518 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| |||||||||||||| ||||||||| Sbjct: 151977 tacctacctacctgtgtcggtttagggtacagg 151945
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 252 bits (127), Expect = 1e-63 Identities = 199/223 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1632 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1573 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1572 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1513 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 502 |||||||||||||||||||||||||||||||||||| ||||||||||||| || || || Sbjct: 1512 ctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtccacacctact 1453 Query: 503 ttcgcggttgcttccctctaaggcggaacgctcccctaccgat 545 |||| | |||||| | ||| ||||||||||||||||||||| Sbjct: 1452 ttcgttgatgcttcaccctagagcggaacgctcccctaccgat 1410 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 1329 atcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagaacgctccacc 1270 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 1269 agtgagctattacgcactctttaa 1246
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 250 bits (126), Expect = 5e-63 Identities = 159/170 (93%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1451 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 1392 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 1391 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 1332 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1331 ctcaccaatgttttcgttactcaagccgacattctcacttccgcgtcgtc 1282 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 ||||||||||||||| |||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 1194 cacagcttcggcagactgcttagtcccgttcattttaggcgcaagagcgcttgaccagtg 1135 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1134 agctattacgcactcttt 1117 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||||||| |||||||||||||||||||||||||| Sbjct: 1680 tacctacctacctgtgtcggtttcgggtacaggta 1646
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 250 bits (126), Expect = 5e-63 Identities = 159/170 (93%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 3220 agtacaggaatattaacctgtttgccatcgactacgcctttcggccttgccttaggtcct 3161 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 3160 gactcaccctccgtggacgagccttgcggaggaaaccttaggttttcggggcattggatt 3101 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 3100 ctcaccaatgttttcgttactcaagccgacattctcacttccgcgtcgtc 3051 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 ||||||||||||||| |||||| ||||||||| || ||||||| ||||| || ||||| Sbjct: 2963 cacagcttcggcagactgcttagtcccgttcattttaggcgcaagagcgcttgaccagtg 2904 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 2903 agctattacgcactcttt 2886 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||||||| |||||||||||||||||||||||||| Sbjct: 3449 tacctacctacctgtgtcggtttcgggtacaggta 3415
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 250 bits (126), Expect = 5e-63 Identities = 126/126 (100%) Strand = Plus / Minus Query: 514 ttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 859 ttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 800 Query: 574 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcact 633 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 799 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcact 740 Query: 634 ctttaa 639 |||||| Sbjct: 739 ctttaa 734
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 244 bits (123), Expect = 3e-61 Identities = 271/318 (85%), Gaps = 3/318 (0%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| |||||||||||||| | ||||||||||||||| || ||||| || Sbjct: 3096 tagtacaggaatattaacctgttgtccatcaattacgcctttcggcctcattttaggtcc 3037 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| ||||||||||||||| |||| | |||||| |||| ||||| ||||||||||||| Sbjct: 3036 tgactaaccctccgtggacgagccttccagaggaatccttaggtttccggggcattggat 2977 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 501 ||||||||||||||||| ||||||||||||||||||| |||| |||| ||| || || | Sbjct: 2976 tctcaccaatgttttcgctactcaagccgacattctcacttctgctttgtccacatccac 2917 Query: 502 tttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatccca 561 ||||| |||||| ||||| || ||||||||||||||||||||| | |||||||| Sbjct: 2916 tttcgttaatgcttcaatctaa-gcagaacgctcccctaccgatgca--taaacatccca 2860 Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||| ||||||| | ||||| ||||||||| ||| ||||| | | || || ||||||| Sbjct: 2859 cagattcggcaagttacttagtcccgttcattttcggcgcaggatcactagaccagtgag 2800 Query: 622 ctattacgcactctttaa 639 |||||||||||||||||| Sbjct: 2799 ctattacgcactctttaa 2782 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacaggta 47 |||| |||||||||||||| ||||||||||| Sbjct: 3312 tacctacctgtgtcggtttagggtacaggta 3282
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 242 bits (122), Expect = 1e-60 Identities = 158/170 (92%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| Sbjct: 1437 agtacaggaatattaacctgttttccatcgactacgcctttcggcctcgccttaggccct 1378 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1377 gactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1318 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1317 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1268 Score = 83.8 bits (42), Expect = 6e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | ||||| Sbjct: 1182 cacagcttcggcaggccgcttagtcccgttcattttcggcgcaagaacgctccaccagtg 1123 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1122 agctattacgcactcttt 1105 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||||||||||||| Sbjct: 1693 tacccacctacctgtgtcggtttcgggtacaggt 1660 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 gcggaacgctcccctaccgat 545 ||||||||||||||||||||| Sbjct: 1235 gcggaacgctcccctaccgat 1215
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 240 bits (121), Expect = 5e-60 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 18 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 77 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 58140 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 58199 Query: 78 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 137 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 58200 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 58254 Query: 138 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 197 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58255 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 58314 Query: 198 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 257 || |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 58315 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 58373 Query: 258 ccttaaacc 266 ||||||||| Sbjct: 58374 ccttaaacc 58382 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 520 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 566 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 58745 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 58791
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 240 bits (121), Expect = 5e-60 Identities = 218/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 18 acccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagcttttc 77 ||||||||||||| ||||| |||||| |||| ||||||||||||||| || ||||||||| Sbjct: 135351 acccacctgtgtcagtttcaggtacatgtactcttttgttgaaggtcatttgagcttttc 135410 Query: 78 ctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcctcgtgg 137 ||| |||||||||| | ||||||||||| | || || ||||| ||||||||||| Sbjct: 135411 ctgaaagtatggcatgg-----atacttcagcgtcataacgtttggtacgagcctcgtgg 135465 Query: 138 agaagcaattgctagtccacggggctcatacttcagcgctgcagcgcttggtactcggac 197 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135466 taaagcaatggctagtccatatggctcatacttcagcgctgcagcgcttggtactcggac 135525 Query: 198 ctcggctcgaggcattttctctaccccttcttaccctgaaaaagcagggtcaccttgtgt 257 || |||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 135526 cttggcttaaggcattttctcta-cccttcttaccctgaaaaaggagggtcaccttgtgt 135584 Query: 258 ccttaaacc 266 ||||||||| Sbjct: 135585 ccttaaacc 135593 Score = 77.8 bits (39), Expect = 4e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 520 ctaaggcggaacgctcccctaccgatgcattttgacatcccacagct 566 ||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 135956 ctaaggcggaacgctcccctaccgatgcattttgatatcccatagct 136002
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 236 bits (119), Expect = 7e-59 Identities = 158/171 (92%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||| ||||||||||||||| |||||| || Sbjct: 1602 tagtacaggaatattaacctgttttccatcgacgacgcctttcggcctggccttaggtcc 1543 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||||||||||| ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1542 tgactcaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1483 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1482 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1432 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 |||||||||||||||| ||||||| ||||||||| ||| ||||||| |||| | ||| Sbjct: 1247 cccacagcttcggcaggccgcttagtcccgttcattttcggcgcaagaacgctttaccag 1188 Query: 618 tgagctattacgcactctttaa 639 |||||||||||||||||||||| Sbjct: 1187 tgagctattacgcactctttaa 1166 Score = 40.1 bits (20), Expect = 8.7 Identities = 32/36 (88%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtac 48 |||| ||| |||||||||||||| ||||||||||| Sbjct: 1869 tacccacctacctgtgtcggtttaaggtacaggtac 1834
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 236 bits (119), Expect = 7e-59 Identities = 268/315 (85%), Gaps = 2/315 (0%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 1412 gtacaggaattttgacctgttgtccatcgactacgcctttcggcatcatcttaggccctg 1353 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||||||||| ||||||||| |||| || ||||| |||| |||||||||||||| |||||| Sbjct: 1352 actcacccttcgtggacgagccttccgaaggaacccttaggttttcggggcatgggattc 1293 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||| | |||| |||||||||||||||||||||| |||| | || ||| || | |||| Sbjct: 1292 tcacccacgtttgcgttactcaagccgacattctcacttctgttttgtccacacatgctt 1233 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccaca 563 |||| ||||| |||| | ||||||||||||||| ||| | ||| |||| |||| Sbjct: 1232 tcgcttacgcttctaactaaaacagaacgctcccctacccatgtaattt-acatgccacg 1174 Query: 564 gcttcggcagatcgctt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagc 622 |||||||||||| ||| || ||| ||||| ||| |||| || ||||| ||||||||||| Sbjct: 1173 gcttcggcagattccttgagtccctttcattttcggcgccagagcgcttgatcagtgagc 1114 Query: 623 tattacgcactcttt 637 ||||||||||||||| Sbjct: 1113 tattacgcactcttt 1099 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||||||| |||||||||||||| |||||||| Sbjct: 1606 tacctacctacctgtgtcggttttaggtacagg 1574
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 234 bits (118), Expect = 3e-58 Identities = 217/250 (86%) Strand = Plus / Plus Query: 167 acttcagcgctgcagcgcttggtactcggacctcggctcgaggcattttctctacccctt 226 |||||| || || ||||| ||||||||| || | |||| |||| |||||||||||||||| Sbjct: 2233 acttcaacgttgtagcgcctggtactcgaacattggcttgaggtattttctctacccctt 2292 Query: 227 cttaccctgaaaaagcagggtcaccttgtgtccttaaacctataaccatctttcggctaa 286 | ||| | ||||| |||| ||||||| ||||| |||| |||||||| |||| ||||| Sbjct: 2293 ttgaccgtaaaaaaataggggcaccttgcatccttgaaccgataaccatttttctgctaa 2352 Query: 287 cctagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgt 346 ||||||||||||||| |||| | ||||||||| |||||||| |||||||| |||| |||| Sbjct: 2353 cctagcctcctccgtacctcgggaccaacaagaggtagtactggaatattcacctcttgt 2412 Query: 347 ccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacct 406 ||||||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||| Sbjct: 2413 ccatcgactacacctttcggcctaatcttaggccctaactcaccctccgtggatgaacct 2472 Query: 407 tgcggaggaa 416 |||||||||| Sbjct: 2473 tgcggaggaa 2482 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 425 ttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttcc 484 ||||| ||||||||||||||||||||||||| | ||| |||||||||||| ||||||| Sbjct: 2497 ttttcagggcattggattctcaccaatgtttgccttaaaaaagccgacattcccgcttcc 2556 Query: 485 gcttcgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccga 544 || || || ||| | || || | |||||||||||||||||||||||||||||| ||| Sbjct: 2557 gcctcttccaccactactcgtgcaggtgcttccctctaaggcggaacgctcccctatcga 2616 Query: 545 tgcattttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaag 604 ||||||||||||||||| |||||| ||||||||||||||| |||||||| | ||||| Sbjct: 2617 tgcattttgacatcccatagcttcaacagatcgcttagcccaattcatctttggtgcaag 2676 Query: 605 ggcgctcgatcagtgagctattacgcact 633 ||||||||| |||||||||||||||||| Sbjct: 2677 tgcgctcgattagtgagctattacgcact 2705 Score = 127 bits (64), Expect = 5e-26 Identities = 76/80 (95%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2148 tacctacctacctgtgttagtttcgggtacaggtacccttttgttgaaggtcgttcgagc 2207 Query: 73 ttttcctgggagtatggcat 92 ||||||| |||||||||||| Sbjct: 2208 ttttcctaggagtatggcat 2227
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 3e-58 Identities = 127/130 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 814527 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 814468 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 814467 ttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcct 814408 Query: 133 cgtggagaag 142 |||||||||| Sbjct: 814407 cgtggagaag 814398 Score = 165 bits (83), Expect = 2e-37 Identities = 92/95 (96%) Strand = Plus / Minus Query: 317 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 |||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||| Sbjct: 9725496 aggggtagtacaggtatattgacatgttgtccatcgactacgcctttcagcctgatctta 9725437 Query: 377 ggccctgactcaccctccgtggacgaaccttgcgg 411 ||||||||||||||||||||||||||||||||||| Sbjct: 9725436 ggccctgactcaccctccgtggacgaaccttgcgg 9725402 Score = 42.1 bits (21), Expect = 2.2 Identities = 40/46 (86%), Gaps = 4/46 (8%) Strand = Plus / Minus Query: 131 ctcgtggagaagcaattgctagt----ccacggggctcatacttca 172 |||||||||||||||| |||||| | ||||||||||||||||| Sbjct: 30471823 ctcgtggagaagcaatggctagtctagctacggggctcatacttca 30471778
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 234 bits (118), Expect = 3e-58 Identities = 127/130 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23735 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 23676 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 23675 ttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcct 23616 Query: 133 cgtggagaag 142 |||||||||| Sbjct: 23615 cgtggagaag 23606
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 234 bits (118), Expect = 3e-58 Identities = 127/130 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 92658 tacctacccacctgtgtcggtttcgggtacaggtacccctttgttgaaggtcgttcgagc 92599 Query: 73 ttttcctgggagtatggcatcggttacatacttcagcgccgtagcgcctggtatgagcct 132 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct: 92598 ttttcctgggagtatggcatgggttacatacttcagcgccgtagtgcctggtatgagcct 92539 Query: 133 cgtggagaag 142 |||||||||| Sbjct: 92538 cgtggagaag 92529
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 |||||||||||| || ||||||| |||||||||| |||| |||||| |||||||||| || Sbjct: 1823 tagtacaggaatgtt-acctgttatccatcgactgcgccattcggcttgatcttaggtcc 1765 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 |||||||||| ||||||||||||||||| ||||| |||| ||||||| ||||||||||| Sbjct: 1764 tgactcaccccacgtggacgaaccttgcgtaggaatccttaggttttcagggcattggat 1705 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgc 501 |||||||||||||| |||||||||||||||||||||| ||||||| ||||| || || || Sbjct: 1704 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcctcgtccacacctgc 1645 Query: 502 tttcgcggttgcttccctctaaggcggaacgctcccctaccgat 545 || ||| |||||| ||||| ||||||||||||||||||||| Sbjct: 1644 ttacgctaatgcttcgatctaacgcggaacgctcccctaccgat 1601 Score = 115 bits (58), Expect = 2e-22 Identities = 73/78 (93%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 ||||||||||||||| ||||||| ||||||||| ||| ||||||| |||||||||||||| Sbjct: 1579 cacagcttcggcagaccgcttagtcccgttcattttcggcgcaagagcgctcgatcagtg 1520 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1519 agctattacgcactcttt 1502 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||||||||||||||||||||||| |||||||||| Sbjct: 1992 tacctacccacctgtgtcggtttctggtacaggta 1958
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| |||||||| | | ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3241 gtacgggaatattaatccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3182 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 3181 actcaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattc 3122 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgctt 503 ||||||||||||||| ||||||||||||||||||| |||||| |||||| || | | ||| Sbjct: 3121 tcaccaatgttttcgctactcaagccgacattctcacttccgtttcgtccacactcactt 3062 Query: 504 tcgcggttgcttccctctaaggcggaacgctcccctaccgatg 546 || |||||| | ||| | ||||||||||||||||||||| Sbjct: 3061 acgttagtgcttcaccctatgacggaacgctcccctaccgatg 3019 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 554 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 613 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| ||||| || Sbjct: 2994 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcagaagcgcttga 2935 Query: 614 tcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 2934 ccagtgagctattacgcactctttaa 2909 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtaca 43 ||||||||||||||||||||||| ||||||| Sbjct: 3494 tacctacccacctgtgtcggtttggggtaca 3464
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 226 bits (114), Expect = 7e-56 Identities = 195/222 (87%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||| ||| Sbjct: 1494 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1435 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1434 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1375 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 502 |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| || Sbjct: 1374 ctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtccacccccact 1315 Query: 503 ttcgcggttgcttccctctaaggcggaacgctcccctaccga 544 | || | ||||| | | | |||||||||||||||||||| Sbjct: 1314 tccgtgaaagcttcacccgagagcggaacgctcccctaccga 1273 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1242 cacagcttcggcaggtcacttagtcccggccattctcggcgcaagaacgctttaccagtg 1183 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1182 agctattacgcactcttt 1165 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 ||||||||||||||| ||||||||| Sbjct: 1717 acctgtgtcggtttcaggtacaggt 1693
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 226 bits (114), Expect = 7e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1407 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1348 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1347 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 1288 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1287 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1238 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||||| |||| |||| ||| ||| ||||||| ||||| | | Sbjct: 1171 atcccacagcttcggcagatcatttagtcccggacattttcggcgcaagaacgctccacc 1112 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 1111 agtgagctattacgcactctttaa 1088 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| |||||||||||||||||| ||||||||| Sbjct: 1637 taccaacccacctgtgtcggtttacggtacaggt 1604
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 226 bits (114), Expect = 7e-56 Identities = 257/302 (85%), Gaps = 2/302 (0%) Strand = Plus / Minus Query: 339 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 398 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 1385 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1326 Query: 399 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 458 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 1325 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1266 Query: 459 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 518 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 1265 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 1206 Query: 519 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 578 || ||||||||||||||||||||||| |||| |||||||| || ||||||| ||| Sbjct: 1205 cctgccgcggaacgctcccctaccgatgc-tttttacatcccatggcctcggcaggccgc 1147 Query: 579 tt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 || || |||||||||||| |||| | ||||| |||||||||||||||||||||||||| Sbjct: 1146 ttgagtcccgttcatctttggcgcgggagcgcttgatcagtgagctattacgcactcttt 1087 Query: 638 aa 639 || Sbjct: 1086 aa 1085 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||| |||||||||||||||| ||||||||||| Sbjct: 1626 tacccacccacctgtgtcggtctcgggtacagg 1594
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 226 bits (114), Expect = 7e-56 Identities = 235/269 (87%), Gaps = 6/269 (2%) Strand = Plus / Minus Query: 374 ttaggccct-gactcaccc--tccgtggacgaacctt-gcggaggaaaccttgggttttc 429 ||||||||| ||||||||| |||||||||||||||| | ||||||| |||| |||||| Sbjct: 1399 ttaggcccttgactcaccccatccgtggacgaacctttggggaggaacccttaggttttg 1340 Query: 430 ggggcattggattctcaccaa-tgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||||||||||| ||||| ||||||||| |||||| | | | | | || Sbjct: 1339 ggggcattggattctcaccaaatgtttggtttactcaaggggacattttagat-cggttt 1281 Query: 489 cgtcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgca 548 |||| |||| ||| |||| ||||||||| ||||| ||||||||||||||| |||||| Sbjct: 1280 cgtccacccttgctggggcgggtgcttccctataagggggaacgctcccctacggatgca 1221 Query: 549 ttttgacatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcg 608 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 1220 tttttacatcccacagcttcggcagatcgcttagccccgttcatcttcggcgcaagagcg 1161 Query: 609 ctcgatcagtgagctattacgcactcttt 637 ||||||||||||| ||||||||||||||| Sbjct: 1160 ctcgatcagtgagttattacgcactcttt 1132 Score = 135 bits (68), Expect = 2e-28 Identities = 84/88 (95%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg-ag 71 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| || Sbjct: 1717 tacctacccacctgtgtcggtttcgggtaaaggtaaccttttgttgaaggtcgttcgaag 1658 Query: 72 cttttcctgggagtatggcatcggttac 99 ||||||||||||||||||||| |||||| Sbjct: 1657 cttttcctgggagtatggcatgggttac 1630
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 226 bits (114), Expect = 7e-56 Identities = 257/302 (85%), Gaps = 2/302 (0%) Strand = Plus / Minus Query: 339 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 398 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 1398 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 1339 Query: 399 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 458 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 1338 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 1279 Query: 459 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 518 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 1278 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 1219 Query: 519 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 578 || ||||||||||||||||||||||| |||| |||||||| || ||||||| ||| Sbjct: 1218 cctgccgcggaacgctcccctaccgatgc-tttttacatcccatggcctcggcaggccgc 1160 Query: 579 tt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 || || |||||||||||| |||| | ||||| |||||||||||||||||||||||||| Sbjct: 1159 ttgagtcccgttcatctttggcgcgggagcgcttgatcagtgagctattacgcactcttt 1100 Query: 638 aa 639 || Sbjct: 1099 aa 1098 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||| |||||||||||||||| ||||||||||| Sbjct: 1639 tacccacccacctgtgtcggtctcgggtacagg 1607
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 226 bits (114), Expect = 7e-56 Identities = 257/302 (85%), Gaps = 2/302 (0%) Strand = Plus / Minus Query: 339 cctgttgtccatcgactacgcctttcggcctgatcttaggccctgactcaccctccgtgg 398 |||||||||||||| || |||| |||||||| | ||||||||||||||||||| |||||| Sbjct: 5972 cctgttgtccatcggctgcgcccttcggcctcaccttaggccctgactcaccccccgtgg 5913 Query: 399 acgaaccttgcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcg 458 |||| |||| | | |||| |||||||||||||||||| ||||||||||||| ||||| || Sbjct: 5912 acgagccttccaggggaacccttgggttttcggggcactggattctcaccagtgtttgcg 5853 Query: 459 ttactcaagccgacattctcgcttccgcttcgtcgacccccgctttcgcggttgcttccc 518 |||||||||||||||||||| ||||||| ||||| || || ||| |||| ||||| Sbjct: 5852 ttactcaagccgacattctcacttccgcctcgtccacgcctgctctcgcttacgcttcaa 5793 Query: 519 tctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgc 578 || ||||||||||||||||||||||| |||| |||||||| || ||||||| ||| Sbjct: 5792 cctgccgcggaacgctcccctaccgatgc-tttttacatcccatggcctcggcaggccgc 5734 Query: 579 tt-agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 || || |||||||||||| |||| | ||||| |||||||||||||||||||||||||| Sbjct: 5733 ttgagtcccgttcatctttggcgcgggagcgcttgatcagtgagctattacgcactcttt 5674 Query: 638 aa 639 || Sbjct: 5673 aa 5672 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||| |||||||||||||||| ||||||||||| Sbjct: 6213 tacccacccacctgtgtcggtctcgggtacagg 6181
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 226 bits (114), Expect = 7e-56 Identities = 156/170 (91%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 26216 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 26157 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 26156 gactcaccctccatggacgaacctagtggaggaatccttaggttttcggggcattggatt 26097 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 26096 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 26047 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||||| |||| |||| ||| ||| ||||||| ||||| | | Sbjct: 25980 atcccacagcttcggcagatcatttagtcccggacattttcggcgcaagaacgctccacc 25921 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 25920 agtgagctattacgcactctttaa 25897 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| |||||||||||||||||| ||||||||| Sbjct: 26446 taccaacccacctgtgtcggtttacggtacaggt 26413
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 224 bits (113), Expect = 3e-55 Identities = 203/233 (87%), Gaps = 5/233 (2%) Strand = Plus / Minus Query: 257 tccttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaaca 316 ||||| ||||||||||||| ||| || ||||||||||| ||||||||||| | | | Sbjct: 1497 tcctttaacctataaccatattttggttaacctagcctactccgtccctcggga-----a 1443 Query: 317 aggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatctta 376 ||||||||| ||||||||| |||| ||||||||| |||| |||||| | |||||||| Sbjct: 1442 gggggtagtataggaatattaacctattgtccatcaactaaacctttcagtatgatctta 1383 Query: 377 ggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcat 436 || ||||||||||||| ||||||||||||||||| ||||| |||| |||||||||||||| Sbjct: 1382 ggacctgactcaccctacgtggacgaaccttgcgaaggaacccttaggttttcggggcat 1323 Query: 437 tggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttc 489 ||||||||||||||||||| |||||||||||||||||||||| |||| ||||| Sbjct: 1322 tggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttc 1270 Score = 103 bits (52), Expect = 7e-19 Identities = 102/119 (85%), Gaps = 6/119 (5%) Strand = Plus / Minus Query: 521 taaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgctt 580 |||||| |||||||||||||||||| | |||||||||||||||||| | |||||| Sbjct: 1228 taaggcagaacgctcccctaccgat------ttacatcccacagcttcggcgggtcgctt 1175 Query: 581 agccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 | ||| ||||| ||| ||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 1174 attcccattcatattcggcgcaagagcgctcgatcagttagctattacgcactctttaa 1116 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 |||||||| |||||||| ||||| |||||||||||||||||| Sbjct: 1649 tacctacctacctgtgttggttttgggtacaggtaccctttt 1608 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 66 ttcgagcttttcctgggagtatggcat 92 |||||||||||||||||||||| |||| Sbjct: 1588 ttcgagcttttcctgggagtatagcat 1562 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Minus Query: 202 gctcgaggcattttctctaccccttc 227 ||||||||||||||||||||| |||| Sbjct: 1534 gctcgaggcattttctctacctcttc 1509
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| || Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1326 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1251 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 1192 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1191 agctattacgcactcttt 1174 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| ||||||||||||||| |||||||||| Sbjct: 1723 taccaacctacctgtgtcggtttcaggtacaggta 1689
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 220 bits (111), Expect = 4e-54 Identities = 156/171 (91%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||| |||||||| ||||| ||||||| || Sbjct: 1496 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctagtcttaggtcc 1437 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1436 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1377 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1376 tctcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1326 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1251 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 1192 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1191 agctattacgcactcttt 1174 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| ||||||||||||||| |||||||||| Sbjct: 1723 taccaacctacctgtgtcggtttcaggtacaggta 1689
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 218 bits (110), Expect = 2e-53 Identities = 315/381 (82%), Gaps = 3/381 (0%) Strand = Plus / Plus Query: 259 cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 318 |||||||| ||||||| | ||||||| ||||||| ||||||||| | ||||||||| Sbjct: 17574 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 17633 Query: 319 gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 378 |||||||||||||| ||||||| |||||||| ||||| || | ||| | |||||| Sbjct: 17634 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 17692 Query: 379 ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 438 |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 17693 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 17752 Query: 439 gattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccc 498 |||||||||||||||||||| ||||||||| |||||||| |||| | | ||| || || Sbjct: 17753 gattctcaccaatgttttcgctactcaagctaacattctcacttctaccttgtccacgcc 17812 Query: 499 cgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatc 558 ||||| ||| ||||| |||| | ||||||||||||||||||| |||| ||||| Sbjct: 17813 cgcttccgctaacgcttcaaactaatgtagaacgctcccctaccgatg--ttttaacatc 17870 Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 |||||||||||| || ||||| ||| ||||| ||| ||||| | || ||||| |||| Sbjct: 17871 ttacagcttcggcaaattacttagtcccattcattttcggcgcaggagcactcgaacagt 17930 Query: 619 gagctattacgcactctttaa 639 ||||||||||||||||||||| Sbjct: 17931 gagctattacgcactctttaa 17951 Score = 218 bits (110), Expect = 2e-53 Identities = 315/381 (82%), Gaps = 3/381 (0%) Strand = Plus / Minus Query: 259 cttaaacctataaccatctttcggctaacctagcctcctccgtccctccgtaccaacaag 318 |||||||| ||||||| | ||||||| ||||||| ||||||||| | ||||||||| Sbjct: 3292 cttaaaccgataaccaacattcggctggtctagccttctccgtccccctttaccaacaat 3233 Query: 319 gggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttagg 378 |||||||||||||| ||||||| |||||||| ||||| || | ||| | |||||| Sbjct: 3232 aaacagtacaggaatattaacctgttatccatcgattacgctattag-cctcaccttagg 3174 Query: 379 ccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattg 438 |||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||| Sbjct: 3173 acctgactcaccctccgcggacgagccttccggaggaacccttgggttttcggggcattg 3114 Query: 439 gattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccc 498 |||||||||||||||||||| ||||||||| |||||||| |||| | | ||| || || Sbjct: 3113 gattctcaccaatgttttcgctactcaagctaacattctcacttctaccttgtccacgcc 3054 Query: 499 cgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatc 558 ||||| ||| ||||| |||| | ||||||||||||||||||| |||| ||||| Sbjct: 3053 cgcttccgctaacgcttcaaactaatgtagaacgctcccctaccgatg--ttttaacatc 2996 Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 |||||||||||| || ||||| ||| ||||| ||| ||||| | || ||||| |||| Sbjct: 2995 ttacagcttcggcaaattacttagtcccattcattttcggcgcaggagcactcgaacagt 2936 Query: 619 gagctattacgcactctttaa 639 ||||||||||||||||||||| Sbjct: 2935 gagctattacgcactctttaa 2915 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 17 tacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||| ||||||||||| Sbjct: 17420 tacccacctgtgtcggtttagggtacaggta 17450 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||| ||||||||||| Sbjct: 3446 tacccacctgtgtcggtttagggtacaggta 3416
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 7e-53 Identities = 154/169 (91%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| |||||||| ||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 1894 gtacgggaatattaacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 1835 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 1834 actaaccctccgtggacgagccttgcggaggaacccttgggttttcggggcattggattt 1775 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1774 tcaccaatgttttcgctactcaagccgacattctcacttccgtttcgtc 1726 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 554 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 613 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||||| ||||| || Sbjct: 1626 acatcccacagcttcggcaaatagcttagtccctttcattttcggcgcaagagcgcttga 1567 Query: 614 tcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 1566 ccagtgagctattacgcactctttaa 1541 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtaca 43 ||||||||||||||||||| ||||||| Sbjct: 2137 tacccacctgtgtcggttttgggtaca 2111
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1173 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1172 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1113 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1112 ttagctattacgcactctttaa 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1599 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 44.1 bits (22), Expect = 0.56 Identities = 34/38 (89%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccc 50 ||||| || |||||||| |||||| ||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccc 1563
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1173 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1172 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1113 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1112 ttagctattacgcactctttaa 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1599 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1407 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1348 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1347 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1288 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1287 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1228 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1227 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1173 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1172 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1113 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1112 ttagctattacgcactctttaa 1091 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1599 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| |||| ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaacctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| | || ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacctctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 210 bits (106), Expect = 4e-51 Identities = 268/322 (83%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgtgcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| ||||| ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcttattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1599 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1558
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 137909 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 137850 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||| Sbjct: 137849 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 137790 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||| || ||||||||| ||||||||| ||||||||||||| Sbjct: 137789 ctcaccaatgtttgcgctactcaagctgacattctcacttccgcttcgtc 137740 Score = 210 bits (106), Expect = 4e-51 Identities = 154/170 (90%) Strand = Plus / Plus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 47635 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 47694 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||| ||||| ||||||| |||| |||||||||||||||||||| Sbjct: 47695 gactcaccctccatggacgagccttgtggaggaacccttaggttttcggggcattggatt 47754 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||| || ||||||||| ||||||||| ||||||||||||| Sbjct: 47755 ctcaccaatgtttgcgctactcaagctgacattctcacttccgcttcgtc 47804 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||||||||||||||| |||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 137668 atcccacagcttcggcaggcagcttagtcccgttcattttcggcgcaagaacgctctacc 137609 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 137608 agtgagctattacgcactcttt 137587 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||||||||||||||| |||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 47876 atcccacagcttcggcaggcagcttagtcccgttcattttcggcgcaagaacgctctacc 47935 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 47936 agtgagctattacgcactcttt 47957 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||||||| ||||||||||| Sbjct: 138152 tacctacccacctgtgtcggtttagggtacaggta 138118 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||||||| ||||||||||| Sbjct: 47392 tacctacccacctgtgtcggtttagggtacaggta 47426
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||||| |||||| || Sbjct: 1559 agtacaggaatattaacctgttttccatcgactacgcctttcggcctggccttaggtccc 1500 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1499 gactaaccccccatggacgagcctagtggaggaagccttaggttttcggggcattggatt 1440 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1439 ctcaccaatgttttcgttactcaagccgacattctcacttccgctt 1394 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Minus Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | ||| Sbjct: 1314 cccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagaacgctctaccag 1255 Query: 618 tgagctattacgcactctttaa 639 |||||||||||||||||||||| Sbjct: 1254 tgagctattacgcactctttaa 1233 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||||||| ||||||||||||||||||||| |||| Sbjct: 1813 tacctacctacctgtgtcggtttcgggtacgggta 1779
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||| |||||||||||||||||| ||||| ||| Sbjct: 1401 agtacaggaatattaacctgttttccatcaactacgcctttcggcctggctttaggtcct 1342 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| ||||||| ||||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1341 gactaaccctccatggacgaacctagtggaggaacccttaggttttcggggcattggatt 1282 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 ||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 1281 ctcaccaatgtttgcgttactcaagccgacattctcacttccgctt 1236 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||| ||||||||||| ||||||| ||||| || ||| ||||||| ||||| | | Sbjct: 1159 atcccatagcttcggcaggccgcttagtcccgtgaattttcggcgcaagaacgctccacc 1100 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 1099 agtgagctattacgcactctttaa 1076 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| |||||||||||||| ||||||||| Sbjct: 1653 tacctacctacctgtgtcggtttaaggtacaggt 1620 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgat 545 |||||||||||||||||||| Sbjct: 1198 cggaacgctcccctaccgat 1179
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 210 bits (106), Expect = 4e-51 Identities = 151/166 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| |||||| |||||||||||||| |||| |||| |||||||||| Sbjct: 3164 agtacaggaatattaacctgtcatccatcgactacgcttttcagcctcgccttaggccct 3105 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||| Sbjct: 3104 gactcaccctccgtggacgaaccttccagaggaaaccttaggttttcggggcattggatt 3045 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||||| |||| |||||||||||||| |||| |||| Sbjct: 3044 ctcaccaatgttttcgctacttaagccgacattctcacttctgctt 2999 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| ||||||||||||||||||||||||| Sbjct: 3385 tacctacctacctgtgtcggtttcgggtacaggt 3352 Score = 54.0 bits (27), Expect = 6e-04 Identities = 94/113 (83%), Gaps = 5/113 (4%) Strand = Plus / Minus Query: 528 gaacgctcccctaccgatgcattttgacatcccacagcttcggca-gatcgcttagcccc 586 ||||||||||||||||||| || ||||||||||||||||||| ||| || || ||| Sbjct: 2960 gaacgctcccctaccgatg---ttaaacatcccacagcttcggcaagata-ctaagtccc 2905 Query: 587 gttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 ||||| ||| ||||| | | || || ||||||||||||||||||||||||| Sbjct: 2904 attcattttcggcgcaggatcactggaccagtgagctattacgcactctttaa 2852
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 150948 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 151007 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 151008 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 151067 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 151068 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 151116 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 43255 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 43196 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 43195 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 43136 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43135 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 43087 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Plus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 151191 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 151250 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 151251 agctattacgcactcttt 151268 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 43012 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 42953 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 42952 agctattacgcactcttt 42935 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 150718 taccaacctacctgtgtcggtttcaggtacaggt 150751 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 43485 taccaacctacctgtgtcggtttcaggtacaggt 43452
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 208 bits (105), Expect = 2e-50 Identities = 153/169 (90%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| ||||||||| ||||| || ||||| ||||||| |||| Sbjct: 1427 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctagtcttaggtcctg 1368 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||||| Sbjct: 1367 actaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggattc 1308 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1307 tcaccaatgttttcgttactcaagccgacattctcacttccgcttcgtc 1259 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1184 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 1125 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1124 agctattacgcactcttt 1107 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 1657 taccaacctacctgtgtcggtttcaggtacaggt 1624
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 208 bits (105), Expect = 2e-50 Identities = 144/157 (91%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||| |||||||| |||||| ||||||| || Sbjct: 1443 tagtacaggaatattaacctgttttccatcgacgacgccttttggcctggtcttaggtcc 1384 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 1383 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 1324 Query: 442 tctcaccaatgttttcgttactcaagccgacattctc 478 ||||||||||||||||||||||||||||||||||||| Sbjct: 1323 tctcaccaatgttttcgttactcaagccgacattctc 1287 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Minus Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 ||||||||||||||| || ||||| |||| ||| || ||||||| |||| | |||| Sbjct: 1201 ccacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagt 1142 Query: 619 gagctattacgcactcttt 637 ||||||||||||||||||| Sbjct: 1141 gagctattacgcactcttt 1123 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| ||||||||||||||| |||||||||| Sbjct: 1672 taccaacctacctgtgtcggtttcaggtacaggta 1638
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 204 bits (103), Expect = 3e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2034 agtacaggaatattaacctgttttccatcgactacgccattcggcctcgccttaggccct 1975 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||| || ||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 1974 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1915 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 ||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 1914 ctcaccaatgttttcgttactcaagccaacattctcacttccg 1872 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 2449 taccaacctacctgtgtcggtttcaggtacaggt 2416
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 204 bits (103), Expect = 3e-49 Identities = 148/163 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||| |||||||||||||| |||||||| ||| Sbjct: 1480 agtacaggaatattaacctgttttccatcgacgacgcctttcggcctaatcttaggtcct 1421 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 1420 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 1361 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 | |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1360 cacaccaatgttttcgttactcaagccgacattctcacttccg 1318 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 ||||||||||||||||| ||||| |||| ||| || |||||| |||| | ||||| Sbjct: 1212 cacagcttcggcagatcacttagtcccggccattgtcggcgcaaaaacgctttaccagtg 1153 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1152 agctattacgcactcttt 1135 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgat 545 |||||||||||||||||||| Sbjct: 1278 cggaacgctcccctaccgat 1259
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 204 bits (103), Expect = 3e-49 Identities = 157/175 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| ||| Sbjct: 1670 agtacaggaatattcgcctgttttccatcgacgacgcctttcggcctagtcttaggtcct 1611 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1610 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1551 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 ||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| Sbjct: 1550 ctcaccaatgttttcgttacttaagccgacattctcacttccgcttcgtccaccc 1496 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactcttt 637 ||||||||||||||||||||||| Sbjct: 1253 cagtgagctattacgcactcttt 1231 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 1904 taccaacctacctgtgtcggtttcaggtacaggt 1871
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 202 bits (102), Expect = 1e-48 Identities = 267/322 (82%), Gaps = 5/322 (1%) Strand = Plus / Minus Query: 318 ggggtagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttag 377 ||||||||||| ||||||| | || ||||||||| ||| |||||| | |||||||| Sbjct: 1408 ggggtagtacaagaatattaatctattgtccatcagctaaacctttcagtatgatcttac 1349 Query: 378 gccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcatt 437 | ||||||||||||| |||||| |||||||| | ||||| |||| ||||||||||||||| Sbjct: 1348 gacctgactcaccctacgtggatgaaccttgtgaaggaatccttaggttttcggggcatt 1289 Query: 438 ggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 |||||||||||||||||| |||||||||||||||||||||| |||| ||||| || ||| Sbjct: 1288 ggattctcaccaatgtttgcgttactcaagccgacattctcacttctgcttcatccacca 1229 Query: 498 ccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacat 557 | || || | ||||||| | |||||| |||||||||||| |||||| | |||| Sbjct: 1228 cttctcgggcaggtgcttccttataaggcagaacgctcccctgccgatg-----ttacat 1174 Query: 558 cccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcag 617 ||||| ||||||| ||| || || ||||||||| ||| || |||| || ||||||||| Sbjct: 1173 cccacggcttcggtggattgcctattcccgttcatattcggcacaagagcactcgatcag 1114 Query: 618 tgagctattacgcactctttaa 639 | |||||||||||||||||||| Sbjct: 1113 ttagctattacgcactctttaa 1092 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt 54 ||||| || |||||||| |||||| ||||||||||||||||| Sbjct: 1600 tacctccctacctgtgttggtttcaggtacaggtaccctttt 1559
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 202 bits (102), Expect = 1e-48 Identities = 147/162 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||||| ||||||||||||||| |||||| ||| Sbjct: 1581 agtacaggaatattaacctgtttgccatcgacgacgcctttcggcctggccttaggtcct 1522 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1521 gactcaccccccacggacgaacctggtggaggaacccttaggttttcggggcattggatt 1462 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttcc 484 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1461 ctcaccaatgttttcgttactcaagccgacattctcacttcc 1420 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactcttt 637 ||||||||||||||||||||||| Sbjct: 1174 cagtgagctattacgcactcttt 1152
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 198 bits (100), Expect = 2e-47 Identities = 118/124 (95%) Strand = Plus / Minus Query: 514 ttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcggcag 573 |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1243 ttccctctaagggggaacgctcccctaccgatgcatttttacatcccacagcttcggcag 1184 Query: 574 atcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcact 633 |||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 1183 atcgtttagccccgttcatcttgggcgcaagagcgctcgatcagtgagctattacgcact 1124 Query: 634 cttt 637 |||| Sbjct: 1123 cttt 1120 Score = 151 bits (76), Expect = 3e-33 Identities = 86/88 (97%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtaccctttt-gttgaaggtcgttcgag 71 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1688 tacctacccacctgtgtcggtttcgggtacaggtaccctttttgttgaaggtcgttcgag 1629 Query: 72 cttttcctgggagtatggcatcggttac 99 ||||||||||||||||||||| |||||| Sbjct: 1628 cttttcctgggagtatggcattggttac 1601 Score = 77.8 bits (39), Expect = 4e-11 Identities = 74/83 (89%), Gaps = 2/83 (2%) Strand = Plus / Minus Query: 388 accctccgtggacgaacctt-gcggaggaaaccttgggttttcgggg-cattggattctc 445 |||||||||||||||||||| | ||||||| |||| | ||||||||| |||| ||||||| Sbjct: 1370 accctccgtggacgaacctttggggaggaacccttagtttttcgggggcattagattctc 1311 Query: 446 accaatgttttcgttactcaagc 468 |||| ||||| |||||||||||| Sbjct: 1310 accattgtttgcgttactcaagc 1288
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 196 bits (99), Expect = 6e-47 Identities = 138/151 (91%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||| ||||| || |||||||||||||| || Sbjct: 3599 tagtacaggaatattaacctgttttccatcgacgacgccgtttggcctgatcttaggtcc 3540 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 3539 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 3480 Query: 442 tctcaccaatgttttcgttactcaagccgac 472 ||||||||||||||||||||||||||||||| Sbjct: 3479 tctcaccaatgttttcgttactcaagccgac 3449 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 2909 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 2850 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 2849 agctattacgcactcttt 2832 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| ||||||||||||||| |||||||||| Sbjct: 3827 taccaacctacctgtgtcggtttcaggtacaggta 3793
>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2786 Score = 196 bits (99), Expect = 6e-47 Identities = 153/171 (89%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||| || Sbjct: 1539 tagtacaggaatattcacctgtttgccatcgactgcgcctttcggcctggccttaggtcc 1480 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| ||| |||||| ||| ||| |||| |||| ||||||||||||||||||| Sbjct: 1479 tgactaacccaccgcggacgaccctaccggtggaacccttaggttttcggggcattggat 1420 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||| |||||||||||||||||||||| ||||||||||||| Sbjct: 1419 tctcaccaatgtttgcgttactcaagccgacattctcacttccgcttcgtc 1369 Score = 52.0 bits (26), Expect = 0.002 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcg-atcag 617 |||||||||||||||| ||||| |||| | || ||| ||||||| |||| | | ||| Sbjct: 1297 ccacagcttcggcagacaacttagtcccgataattttcggcgcaagaacgcttggaccag 1238 Query: 618 tgagctattacgcactctttaa 639 |||||||||||||||||||||| Sbjct: 1237 tgagctattacgcactctttaa 1216
>gb|AC151407.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0073M15, complete sequence Length = 143071 Score = 194 bits (98), Expect = 2e-46 Identities = 104/106 (98%) Strand = Plus / Minus Query: 52 tttgttgaaggtcgttcgagcttttcctgggagtatggcatcggttacatacttcagcgc 111 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 24880 tttgttgaaggtcgttcgagcttttcctgggagtatggcatgggttacatacttcagcgc 24821 Query: 112 cgtagcgcctggtatgagcctcgtggagaagcaattgctagtccac 157 ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 24820 cgtagcgcctggtatgagcctcgtggagaagcaatggctagtccac 24775
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||| ||||| || ||| ||||||||||||||||||| |||||||| |||||| ||| Sbjct: 1028 agtacgggaattttaacccgttgtccatcgactacgccgttcggcctcgccttaggtcct 969 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||||||| |||||||||| |||||||||||||| || ||||||||||||||||| Sbjct: 968 gactaaccctccggggacgaacctggcggaggaaaccttagggtttcggggcattggatt 909 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||||||||||| || ||||||||||||||||||| |||||| |||||| Sbjct: 908 ctcaccaatgtttgcgctactcaagccgacattctcacttccgtttcgtc 859 Score = 75.8 bits (38), Expect = 2e-10 Identities = 72/82 (87%), Gaps = 1/82 (1%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||| | ||||||||||||||||||| ||| ||| | | ||||| || Sbjct: 792 atcccacagcttcggtacatcgcttagccccgttcattttcggcg-aggagcgcttgact 734 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 733 agtgagctattacgcactcttt 712 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggta 47 |||||||||||||||||||||||||| Sbjct: 1239 acctgtgtcggtttcgggtacaggta 1214 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgat 545 |||||||||||||||||||| Sbjct: 824 cggaacgctcccctaccgat 805
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 194 bits (98), Expect = 2e-46 Identities = 146/162 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||||||||||| |||||||| |||||| ||| Sbjct: 1484 agtacaggaatattaacctgtttgccatcgactacgccgttcggcctcgccttaggtcct 1425 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || ||||||| ||||| ||||||| |||| ||||| |||||||||||||| Sbjct: 1424 gactcaccccccatggacgagccttgtggaggaacccttaggtttccggggcattggatt 1365 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttcc 484 |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1364 ctcaccaatgttttcgttactcaagccgacattctcacttcc 1323 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||| ||||||| |||| ||| || ||||||| |||| | | Sbjct: 1185 atcccacagcttcggcagaccgcttagtcccggccattatcggcgcaagaacgctttacc 1126 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 1125 agtgagctattacgcactctttaa 1102 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| |||||||||||||| ||||||||| Sbjct: 1740 tacctacctacctgtgtcggtttatggtacaggt 1707
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 194 bits (98), Expect = 2e-46 Identities = 149/166 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||||||||| |||||||| ||| |||||| ||| Sbjct: 1464 agtacaggaatattaacctgttctccatcgactacacctttcggtctggccttaggtcct 1405 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| ||||| | ||||||||||| | ||||| |||| |||||||||||||||||||| Sbjct: 1404 gactaacccttcatggacgaacctagtaaaggaacccttaggttttcggggcattggatt 1345 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1344 ctcaccaatgttttcgttactcaagccgacattctcacttccgctt 1299 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||| | | Sbjct: 1192 atcccacagcttcggcagaccgcttagtcccgttcattttcggcgcaagaacgctccacc 1133 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 1132 agtgagctattacgcactctttaa 1109 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| |||||||||||||||||||||||||| Sbjct: 1728 tacccacctacctgtgtcggtttcgggtacaggta 1694 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 525 gcggaacgctcccctaccgat 545 ||||||||||||||||||||| Sbjct: 1262 gcggaacgctcccctaccgat 1242
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 192 bits (97), Expect = 1e-45 Identities = 145/161 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacattctcacttc 1542 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 ||||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||| Sbjct: 1317 ccacagcttcggcaggtcacttagtcccggccattgtcggcgcaagaacgctttactagt 1258 Query: 619 gagctattacgcactctttaa 639 ||||||||||||||||||||| Sbjct: 1257 gagctattacgcactctttaa 1237 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 ||||||||||||||| ||||||||| Sbjct: 1922 acctgtgtcggtttcaggtacaggt 1898
>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1 Length = 2219 Score = 192 bits (97), Expect = 1e-45 Identities = 145/161 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 1702 agtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcct 1643 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1642 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 1583 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||||||||||||||||||||||||| |||||||| |||| Sbjct: 1582 ctcaccaatgttttcgttactcaagccaacattctcacttc 1542 Score = 50.1 bits (25), Expect = 0.009 Identities = 67/81 (82%) Strand = Plus / Minus Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 ||||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||| Sbjct: 1317 ccacagcttcggcaggtcacttagtcccggccattgtcggcgcaagaacgctttactagt 1258 Query: 619 gagctattacgcactctttaa 639 ||||||||||||||||||||| Sbjct: 1257 gagctattacgcactctttaa 1237 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 ||||||||||||||| ||||||||| Sbjct: 1922 acctgtgtcggtttcaggtacaggt 1898
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 190 bits (96), Expect = 4e-45 Identities = 189/220 (85%) Strand = Plus / Plus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 170075 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 170134 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 170135 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 170194 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 502 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 170195 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 170254 Query: 503 ttcgcggttgcttccctctaaggcggaacgctcccctacc 542 | || | ||||| | || |||||||||||||||||||| Sbjct: 170255 tccggaatagcttctccctcaggcggaacgctcccctacc 170294 Score = 190 bits (96), Expect = 4e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 122851 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 122792 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 122791 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 122732 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 502 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 122731 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 122672 Query: 503 ttcgcggttgcttccctctaaggcggaacgctcccctacc 542 | || | ||||| | || |||||||||||||||||||| Sbjct: 122671 tccggaatagcttctccctcaggcggaacgctcccctacc 122632 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 561 acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 620 ||||||||||||| ||||||| ||||||||| ||| |||| || ||||| || |||||| Sbjct: 170310 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 170369 Query: 621 gctattacgcactcttt 637 ||||||||||||||||| Sbjct: 170370 gctattacgcactcttt 170386 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 561 acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 620 ||||||||||||| ||||||| ||||||||| ||| |||| || ||||| || |||||| Sbjct: 122616 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 122557 Query: 621 gctattacgcactcttt 637 ||||||||||||||||| Sbjct: 122556 gctattacgcactcttt 122540 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 17 tacccacctgtgtcggtttcgggtacaggt 46 |||| ||||||||||||||||||||||||| Sbjct: 169814 tacctacctgtgtcggtttcgggtacaggt 169843 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacaggt 46 |||| ||||||||||||||||||||||||| Sbjct: 123112 tacctacctgtgtcggtttcgggtacaggt 123083
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Plus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 154770 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 154829 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 154830 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 154889 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 154890 ctcaccaatgttttcgttactcaagccgacattctcacttccgc 154933 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| |||||||||||||| ||||||| |||||| ||| Sbjct: 79122 agtacaggaatattaacctgtttgccatcgactacgccgctcggcctcgccttaggtcct 79063 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 79062 gactcaccccccacggacgaaccttgtagaggaacccttaggttttcggggcattggatt 79003 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79002 ctcaccaatgttttcgttactcaagccgacattctcacttccgc 78959 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||| ||||||||||||| |||||| |||| ||| || ||||||| |||| | | Sbjct: 155032 atcccatagcttcggcagattgcttagtcccggccattgtcggcgcaagaacgctttacc 155091 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 155092 agtgagctattacgcactcttt 155113 Score = 60.0 bits (30), Expect = 9e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||| ||||||||||||| |||||| |||| ||| || ||||||| |||| | | Sbjct: 78860 atcccatagcttcggcagattgcttagtcccggccattgtcggcgcaagaacgctttacc 78801 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 78800 agtgagctattacgcactcttt 78779 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 154519 taccaacctacctgtgtcggtttcaggtacaggt 154552 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 79373 taccaacctacctgtgtcggtttcaggtacaggt 79340
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome Length = 1842899 Score = 190 bits (96), Expect = 4e-45 Identities = 144/160 (90%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||||| |||||| || | Sbjct: 1666872 gtacaggaatattgacctgttatccatcgactacgcctttcggcctgaccttaggaccag 1666813 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 1666812 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1666753 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 1666752 tcacccatgttttcgctactcaagccgacattctcacttc 1666713 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 578 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactc 634 ||||||||||||||| ||| ||||| | ||||||| ||||| |||||||||||||| Sbjct: 1666621 cttagccccgttcattttcggcgcaggatcgctcgaccagtgggctattacgcactc 1666565 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 1667088 cccacctgtgtcggtttcgggtac 1667065
>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 4173 Score = 190 bits (96), Expect = 4e-45 Identities = 147/164 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1587 agtacaggaatataaacctgtttgccatcgactacgcctgtcggcctcgccttaggtcct 1528 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||| | ||||||||||||| ||||| |||| |||||||||||||||||||| Sbjct: 1527 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcggggcattggatt 1468 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgc 486 ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1467 ctcaccaatgttttcgttactcaagccgacattctcgctcccgc 1424 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 1219 cagtgagctattacgcactctttaa 1195 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 1841 taccaacctacctgtgtcggtttcaggtacaggt 1808
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 190 bits (96), Expect = 4e-45 Identities = 189/220 (85%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||| ||| Sbjct: 1442 agtacaggaatattaaccagtttgccatcgactacgcctgtcggcctcgtcttaggtcct 1383 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||||| ||||||||||||| | ||||| |||| |||||||||||| ||||||| Sbjct: 1382 gactcaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcgttggatt 1323 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgacccccgct 502 ||||||| |||| |||||||||||||||||||||| ||||||| | ||| ||| || || Sbjct: 1322 ctcaccagcgtttgcgttactcaagccgacattctcacttccgccttgtccaccacccct 1263 Query: 503 ttcgcggttgcttccctctaaggcggaacgctcccctacc 542 | || | ||||| | || |||||||||||||||||||| Sbjct: 1262 tccggaatagcttctccctcaggcggaacgctcccctacc 1223 Score = 81.8 bits (41), Expect = 3e-12 Identities = 68/77 (88%) Strand = Plus / Minus Query: 561 acagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtga 620 ||||||||||||| ||||||| ||||||||| ||| |||| || ||||| || |||||| Sbjct: 1207 acagcttcggcaggccgcttagtcccgttcattttcggcgcgagagcgcttgaccagtga 1148 Query: 621 gctattacgcactcttt 637 ||||||||||||||||| Sbjct: 1147 gctattacgcactcttt 1131 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacaggt 46 |||| ||||||||||||||||||||||||| Sbjct: 1703 tacctacctgtgtcggtttcgggtacaggt 1674
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 190 bits (96), Expect = 4e-45 Identities = 225/264 (85%), Gaps = 3/264 (1%) Strand = Plus / Minus Query: 377 ggccctgactcaccc-tccgtggacgaacc-ttgcggaggaaaccttgggtttt-cgggg 433 |||| |||||||||| || ||||||||||| ||| ||||||| | || | |||| |||| Sbjct: 1394 ggccttgactcacccctcggtggacgaacctttggggaggaacctttagtttttgggggg 1335 Query: 434 cattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcg 493 |||| ||||||||||||||||| ||||||| | || |||||||| | ||||| || ||| Sbjct: 1334 cattagattctcaccaatgtttgcgttactaaggcggacattctggtttccgtttggtcc 1275 Query: 494 acccccgctttcgcggttgcttccctctaaggcggaacgctcccctaccgatgcattttg 553 |||| | | | || || |||||| ||||| ||||||||||||||| |||||||||| Sbjct: 1274 acccatgttggggggggtgtttccctttaagggggaacgctcccctacggatgcattttt 1215 Query: 554 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 613 ||||||||||||||||||||||||||||||||||||||| || ||||||| ||||| || Sbjct: 1214 acatcccacagcttcggcagatcgcttagccccgttcattttgggcgcaagagcgctgga 1155 Query: 614 tcagtgagctattacgcactcttt 637 |||||||||||||||||||||||| Sbjct: 1154 tcagtgagctattacgcactcttt 1131 Score = 145 bits (73), Expect = 2e-31 Identities = 80/81 (98%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcg-ag 71 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1705 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgaag 1646 Query: 72 cttttcctgggagtatggcat 92 ||||||||||||||||||||| Sbjct: 1645 cttttcctgggagtatggcat 1625
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 188 bits (95), Expect = 2e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| || Sbjct: 7149 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 7090 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||||||||| | ||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 7089 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 7030 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 7029 tctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 6983 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||||||| |||||||||| Sbjct: 7386 tacctacccacctgtgtcggtttatggtacaggta 7352 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 6811 cagtgagctattacgcactctttaa 6787
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 188 bits (95), Expect = 2e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 193281 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 193222 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||| | ||||||||||||| ||||| |||| |||||||||| ||||||||| Sbjct: 193221 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 193162 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 193161 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtcaaccc 193107 Score = 188 bits (95), Expect = 2e-44 Identities = 155/175 (88%) Strand = Plus / Plus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||| ||| Sbjct: 143501 agtacaggaatgttgacctgtttgccatcgactacgcctttcgacctcgccttaggacct 143560 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||||||||| | ||||||||||||| ||||| |||| |||||||||| ||||||||| Sbjct: 143561 gactcacccttcatggacgaaccttgtaaaggaacccttaggttttcgggacattggatt 143620 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccc 497 ||||||||||||| |||||||||||||||||||||| ||||||| ||||| |||| Sbjct: 143621 ctcaccaatgtttgcgttactcaagccgacattctcacttccgcgtcgtcaaccc 143675 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||||||||||||||| ||||||| ||||||||| ||| |||||| ||||| | | Sbjct: 193044 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaaaaacgctctacc 192985 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 192984 agtgagctattacgcactcttt 192963 Score = 83.8 bits (42), Expect = 6e-13 Identities = 72/82 (87%) Strand = Plus / Plus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 |||||||||||||||||| ||||||| ||||||||| ||| |||||| ||||| | | Sbjct: 143738 atcccacagcttcggcaggccgcttagtcccgttcattttcggcgcaaaaacgctctacc 143797 Query: 616 agtgagctattacgcactcttt 637 |||||||||||||||||||||| Sbjct: 143798 agtgagctattacgcactcttt 143819 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| ||||||||||||||||||||||||| Sbjct: 193512 tacctacctacctgtgtcggtttcgggtacaggt 193479 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| ||||||||||||||||||||||||| Sbjct: 143270 tacctacctacctgtgtcggtttcgggtacaggt 143303
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 188 bits (95), Expect = 2e-44 Identities = 149/167 (89%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| ||||||||||||||||||||||| |||||| || Sbjct: 1500 tagtacaggaatattaacctgtttgccatcgactacgcctttcggcctcgccttaggtcc 1441 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||||||||| | ||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 1440 tgactcacccttcatggacgaacctagtaaaggaatccttaggttttcggggcattggat 1381 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccgctt 488 |||||||||||||| |||||||||||||||||||||| |||| |||| Sbjct: 1380 tctcaccaatgtttgcgttactcaagccgacattctcacttctgctt 1334 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||||||| |||||||||| Sbjct: 1737 tacctacccacctgtgtcggtttatggtacaggta 1703 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 1162 cagtgagctattacgcactctttaa 1138
>emb|AL831802.5|CNS08CAF Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0083D13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104259 Score = 188 bits (95), Expect = 2e-44 Identities = 101/103 (98%) Strand = Plus / Minus Query: 156 acggggctcatacttcagcgctgcagcgcttggtactcggacctcggctcgaggcatttt 215 |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 15893 acggggctcatacttcagcgctgcagtgcttggtactcggacctcggctcgatgcatttt 15834 Query: 216 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 258 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15833 ctctaccccttcttaccctgaaaaagcagggtcaccttgtgtc 15791
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 186 bits (94), Expect = 6e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 2896 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 2837 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 2836 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 2777 Query: 443 ctcaccaatgttttcgttactcaagccgac 472 |||||||||||||||||||||||||||||| Sbjct: 2776 ctcaccaatgttttcgttactcaagccgac 2747 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1191 cacagcttcggcaggtcacttagtcccggccattgtcggcgcaagaacgctttaccagtg 1132 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1131 agctattacgcactcttt 1114 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 ||||||||||||||| ||||||||| Sbjct: 3116 acctgtgtcggtttcaggtacaggt 3092
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 186 bits (94), Expect = 6e-44 Identities = 121/130 (93%) Strand = Plus / Minus Query: 508 ggttgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagctt 567 ||||| |||||| || ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1255 ggttgtttccctttagggcggaacgctcccctaccgatgcatttttacatcccacagctt 1196 Query: 568 cggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctatta 627 |||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||| Sbjct: 1195 cggcagatcgtttagccccgttcattttgggcgcaagagcgctcgatcagtgagctatta 1136 Query: 628 cgcactcttt 637 |||||||||| Sbjct: 1135 cgcactcttt 1126 Score = 143 bits (72), Expect = 8e-31 Identities = 79/80 (98%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggtacccttttgttgaaggtcgttcgagc 72 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1699 tacctacccacctgtgtcggtttcgggtacaggtacc-ttttgttgaaggtcgttcgagc 1641 Query: 73 ttttcctgggagtatggcat 92 |||||||||||||||||||| Sbjct: 1640 ttttcctgggagtatggcat 1621 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 425 ttttcggggcattggattctcaccaatgttt 455 ||||||||||||| ||||||||||| ||||| Sbjct: 1341 ttttcggggcattagattctcaccattgttt 1311
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 186 bits (94), Expect = 6e-44 Identities = 151/170 (88%) Strand = Plus / Plus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||| |||||||||||| |||||||||||||||||||||||||||| |||||| || Sbjct: 2333412 agtactggaatattgaccagttgtccatcgactacgcctttcggcctcgccttaggtccc 2333471 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| ||||| || |||||| |||| || ||||| ||||||| ||||||||||||||||| Sbjct: 2333472 gactaacccttcgcggacgagccttccgaaggaacccttggggtttcggggcattggatt 2333531 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||| ||||||||||| ||||||| |||| |||||||| Sbjct: 2333532 ctcaccaatgttttcgctactcaagccggcattctcacttctgcttcgtc 2333581 Score = 69.9 bits (35), Expect = 1e-08 Identities = 68/79 (86%) Strand = Plus / Plus Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 |||||||||||| | ||| ||||| ||||||||| ||| ||||| | |||| || |||| Sbjct: 2333647 ccacagcttcggtacatcacttagtcccgttcattttcggcgcaggaacgcttgaccagt 2333706 Query: 619 gagctattacgcactcttt 637 ||||||||||||||||||| Sbjct: 2333707 gagctattacgcactcttt 2333725 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 19 cccacctgtgtcggtttcgggtacaggta 47 |||||||||||||||||||||||| |||| Sbjct: 2333198 cccacctgtgtcggtttcgggtacgggta 2333226
>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2 Length = 655 Score = 186 bits (94), Expect = 6e-44 Identities = 136/150 (90%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||| Sbjct: 150 agtacaggaatattaacctgtttaccatcgactacgcctttcggcctcgccttaggtcct 91 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || |||||||||| | ||||||| |||| |||||||||||||||||||| Sbjct: 90 gactcaccccccacggacgaacctagtggaggaacccttaggttttcggggcattggatt 31 Query: 443 ctcaccaatgttttcgttactcaagccgac 472 |||||||||||||||||||||||||||||| Sbjct: 30 ctcaccaatgttttcgttactcaagccgac 1 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 ||||||||||||||| ||||||||| Sbjct: 370 acctgtgtcggtttcaggtacaggt 346
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 3149 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 3090 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 3089 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 3030 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 3029 tcacctatattttcgttactcaagccgacattctcacttctgcttcgtc 2981 Score = 65.9 bits (33), Expect = 2e-07 Identities = 94/113 (83%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 528 gaacgctcccctaccgatgcattttg-acatcccacagcttcggcagatcgcttagcccc 586 |||||||||||||||||| ||||| | ||| ||||| ||||||| || ||||| ||| Sbjct: 2945 gaacgctcccctaccgatatattttatatatcgcacagtttcggcaaattacttagtccc 2886 Query: 587 gttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 || ||| ||| ||||| | ||||||||||||||||||||||||||||||| Sbjct: 2885 gtacattttcggcgcaggtttactcgatcagtgagctattacgcactctttaa 2833 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtt 34 |||||||||||||||||||||| Sbjct: 3370 tacctacccacctgtgtcggtt 3349
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| |||| Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| |||||| Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1341 tcaccgatgttttcgttactcaagccgacattctcacttccgcctcgtc 1293 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1198 cacagcttcggcaggtcacttagtcccggccattgtcggcgcaagaacgctttaccagtg 1139 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1138 agctattacgcactcttt 1121 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||| ||| ||||||||||||||| |||||||| Sbjct: 1691 taccaacctacctgtgtcggtttcaggtacagg 1659
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1659901 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1659842 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1659841 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1659782 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1659781 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1659733 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1048843 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1048902 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1048903 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1048962 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1048963 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1049011 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 578 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||||||| ||| ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 1659648 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctattacgcactcttt 1659589 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 578 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||||||| ||| ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 1049096 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctattacgcactcttt 1049155 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||| ||||||||| Sbjct: 1660117 cccacctgtgtcggtttagggtacagg 1660091 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 19 cccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||| ||||||||| Sbjct: 1048627 cccacctgtgtcggtttagggtacagg 1048653
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 184 bits (93), Expect = 2e-43 Identities = 144/161 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 |||||||||||||| ||||||| ||||||||||||||| ||||||| |||||| ||| Sbjct: 1669 agtacaggaatattaacctgttttccatcgactacgccgctcggcctcgccttaggtcct 1610 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||| || ||||||||||||| |||||| |||| |||||||||||||||||||| Sbjct: 1609 gactaaccccccatggacgaaccttgtagaggaacccttaggttttcggggcattggatt 1550 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttc 483 |||||||||||||||||||||||| || ||||||||||||| Sbjct: 1549 ctcaccaatgttttcgttactcaaaccaacattctcgcttc 1509 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 1945 taccaacctacctgtgtcggtttcaggtacaggt 1912
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 1663 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 1604 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 1603 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 1544 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 1543 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 1495 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 578 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||||||| ||| ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 1410 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctattacgcactcttt 1351 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||| ||||||||| Sbjct: 1879 cccacctgtgtcggtttagggtacagg 1853
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| ||||||| ||||||||| ||||| || |||||| ||||||| |||| Sbjct: 1461 gtacaggaatattaacctgttttccatcgacgacgccgtttggcctggtcttaggtcctg 1402 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||| |||||| Sbjct: 1401 actaaccccccatggacgagcctagtggaggaacccttaggttttcggggcatcggattc 1342 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 1341 tcaccgatgttttcgttactcaagccgacattctcacttccgcctcgtc 1293 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1198 cacagcttcggcaggtcacttagtcccggccattgtcggcgcaagaacgctttaccagtg 1139 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1138 agctattacgcactcttt 1121 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacagg 45 |||| ||| ||||||||||||||| |||||||| Sbjct: 1691 taccaacctacctgtgtcggtttcaggtacagg 1659
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 2656885 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 2656944 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 2656945 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 2657004 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 2657005 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 2657053 Score = 184 bits (93), Expect = 2e-43 Identities = 150/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||| |||||||||||||||||||||| ||| |||| |||||| |||| Sbjct: 572036 gtacaggaatattaacctgttgtccatcgactacgcacttctgcctcgccttaggacctg 571977 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| |||||||| ||||||| ||||||||||| |||||| Sbjct: 571976 actaaccctccgcggacgagccttccggaggaacccttgggatttcggggcatgggattc 571917 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 ||||| ||||||||| ||||||||||||||||||| |||||| |||||| Sbjct: 571916 tcacccatgttttcgctactcaagccgacattctcacttccgtttcgtc 571868 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Plus Query: 578 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||||||| ||| ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 2657138 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctattacgcactcttt 2657197 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 578 cttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 ||||||||||||||| ||| ||||| | ||||| || ||||||||||||||||||||||| Sbjct: 571783 cttagccccgttcattttcggcgcaggagcgcttgaccagtgagctattacgcactcttt 571724 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 19 cccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||| ||||||||| Sbjct: 2656669 cccacctgtgtcggtttagggtacagg 2656695 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||| ||||||||| Sbjct: 572252 cccacctgtgtcggtttagggtacagg 572226
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 182 bits (92), Expect = 9e-43 Identities = 143/160 (89%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| |||||||| ||| |||||||||||||||||||||||||||| |||||| || | Sbjct: 1025 gtacgggaatattaacccgttgtccatcgactacgcctttcggcctcgccttaggtcccg 966 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| |||||||| |||| || |||||||||||||||||| Sbjct: 965 actaaccctccgcggacgagccttccggaggaacccttagggtttcggggcattggattc 906 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||||||||||||| ||||||||||||||||||| |||| Sbjct: 905 tcaccaatgttttcgctactcaagccgacattctcacttc 866 Score = 46.1 bits (23), Expect = 0.14 Identities = 66/79 (83%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 559 ccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagt 618 |||||||||||| || |||||| ||||||||| ||| ||| | | |||| || |||| Sbjct: 789 ccacagcttcggtaggatgcttagtcccgttcattttcggcg-aggatcgcttgaccagt 731 Query: 619 gagctattacgcactcttt 637 ||||||||||||||||||| Sbjct: 730 gagctattacgcactcttt 712 Score = 44.1 bits (22), Expect = 0.56 Identities = 28/30 (93%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtac 42 ||||| || ||||||||||||||||||||| Sbjct: 1247 tacctccctacctgtgtcggtttcgggtac 1218
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 182 bits (92), Expect = 9e-43 Identities = 146/164 (89%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| |||||||| |||||||||||||| |||||| || Sbjct: 1469 tagtacaggaatattaacctgtttgccatcgacgacgcctttcggcctagccttagggcc 1410 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 |||||||||| || ||||||||||| | ||||||| || ||||||||||||||||||| Sbjct: 1409 tgactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggat 1350 Query: 442 tctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 ||| ||||||||||||||||||||||||||||||||| |||||| Sbjct: 1349 tctaaccaatgttttcgttactcaagccgacattctcacttccg 1306 Score = 63.9 bits (32), Expect = 6e-07 Identities = 92/112 (82%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagccc 585 ||||||||||||||||||| ||||| | || |||||||||||||| || ||||| || Sbjct: 1265 cggaacgctcccctaccgacatatttttatgtctcacagcttcggcaggtcacttagtcc 1206 Query: 586 cgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 || ||| || ||||||| |||| | ||||||||||||||||||||||| Sbjct: 1205 cggccattgtcggcgcaagaacgctttaccagtgagctattacgcactcttt 1154
>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6713 Score = 180 bits (91), Expect = 4e-42 Identities = 145/163 (88%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||||| || ||||||| |||||||||||||||||||||||| |||||| ||| Sbjct: 3003 agtacaggaatcttaacctgttttccatcgactacgcctttcggccttgccttaggtcct 2944 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 ||||||||| || ||||||||||| | ||||||| || |||||||||||||||||||| Sbjct: 2943 gactcaccccccatggacgaacctagtggaggaacccaacggttttcggggcattggatt 2884 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 || |||||||||||||||||||||||| |||||||| |||||| Sbjct: 2883 cttaccaatgttttcgttactcaagccaacattctcacttccg 2841 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactcttt 637 ||||||||||||||||||||||| Sbjct: 2703 cagtgagctattacgcactcttt 2681 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgat 545 |||||||||||||||||||| Sbjct: 2800 cggaacgctcccctaccgat 2781
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 180 bits (91), Expect = 4e-42 Identities = 142/159 (89%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||| || | |||||||| ||||||| ||||||||||| ||| ||||||| ||| Sbjct: 1873 agtacaggattagtaacctgttgcccatcgaatacgcctttcgaccttttcttaggacct 1814 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| |||| || ||||||| ||| | ||||||| |||| |||||||||||||||||||| Sbjct: 1813 gactaaccccccatggacgagcctagtggaggaacccttaggttttcggggcattggatt 1754 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgct 481 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1753 ctcaccaatgttttcgttactcaagccgacattctcgct 1715 Score = 48.1 bits (24), Expect = 0.036 Identities = 63/76 (82%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1365 cacagcttcggcaggtcacttagtcccggccattgtcggcgcaagaacgctttaccagtg 1306 Query: 620 agctattacgcactct 635 |||||||||||||||| Sbjct: 1305 agctattacgcactct 1290 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||| ||| ||||||||||||||| ||||||||| Sbjct: 2095 taccaacctacctgtgtcggtttcaggtacaggt 2062
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 180 bits (91), Expect = 4e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| || Sbjct: 2875 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 2816 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 2815 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 2756 Query: 442 tctcaccaatgttttcgttactcaagccgac 472 ||||||||||||||||||||||||||||||| Sbjct: 2755 tctcaccaatgttttcgttactcaagccgac 2725 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 560 cacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtg 619 |||||||||||||| || ||||| |||| ||| || ||||||| |||| | ||||| Sbjct: 1195 cacagcttcggcaggtcacttagtcccggccattatcggcgcaagaacgctttaccagtg 1136 Query: 620 agctattacgcactcttt 637 |||||||||||||||||| Sbjct: 1135 agctattacgcactcttt 1118 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| ||||||||||||||| |||||||||| Sbjct: 3102 taccaacctacctgtgtcggtttcaggtacaggta 3068
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 180 bits (91), Expect = 4e-42 Identities = 118/127 (92%) Strand = Plus / Minus Query: 511 tgcttccctctaaggcggaacgctcccctaccgatgcattttgacatcccacagcttcgg 570 |||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1244 tgcttccccctaacacggaacgctcccctaccgatgtttttttacatcccacagcttcgg 1185 Query: 571 cagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgc 630 ||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 1184 cagatcgtttagccccgttcatcttcggcgcaagagcgctcgatcagtgagctattacgc 1125 Query: 631 actcttt 637 ||||||| Sbjct: 1124 actcttt 1118
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Plus Query: 289 tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 348 |||||| ||||||||||| || |||||| |||||| |||||||| ||| ||||||| Sbjct: 38992 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 39051 Query: 349 atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 408 || |||||||||||||||| |||||| ||||||| |||||||| |||||| |||| Sbjct: 39052 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 39111 Query: 409 cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 468 |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 39112 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 39171 Query: 469 cgacattctcgcttc 483 |||||||||| |||| Sbjct: 39172 cgacattctcacttc 39186 Score = 180 bits (91), Expect = 4e-42 Identities = 169/195 (86%) Strand = Plus / Minus Query: 289 tagcctcctccgtccctccgtaccaacaaggggtagtacaggaatattgacctgttgtcc 348 |||||| ||||||||||| || |||||| |||||| |||||||| ||| ||||||| Sbjct: 20408 tagccttctccgtccctcgttatcaacaatacatagtacgggaatattaacccgttgtcc 20349 Query: 349 atcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaaccttg 408 || |||||||||||||||| |||||| ||||||| |||||||| |||||| |||| Sbjct: 20348 attagctacgcctttcggcctcgccttaggtcctgacttaccctccgcggacgagccttc 20289 Query: 409 cggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaagc 468 |||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 20288 cggaggaatccttaggttttcggggcattggattctcaccaatgttttcgctactcaagc 20229 Query: 469 cgacattctcgcttc 483 |||||||||| |||| Sbjct: 20228 cgacattctcacttc 20214 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||| || ||||| ||| |||| ||| ||||| | ||||| |||| Sbjct: 39254 atcccacagcttcggcaaattacttagtcccagtcattttcggcgcaggtgcgcttgatc 39313 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 39314 agtgagctattacgcactctttaa 39337 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 556 atcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatc 615 ||||||||||||||||| || ||||| ||| |||| ||| ||||| | ||||| |||| Sbjct: 20146 atcccacagcttcggcaaattacttagtcccagtcattttcggcgcaggtgcgcttgatc 20087 Query: 616 agtgagctattacgcactctttaa 639 |||||||||||||||||||||||| Sbjct: 20086 agtgagctattacgcactctttaa 20063 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 17 tacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||| |||||||||| Sbjct: 38809 tacccacctgtgtcggtttgtggtacaggta 38839 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacaggta 47 ||||||||||||||||||| |||||||||| Sbjct: 20591 tacccacctgtgtcggtttgtggtacaggta 20561
>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2 Length = 659 Score = 180 bits (91), Expect = 4e-42 Identities = 136/151 (90%) Strand = Plus / Minus Query: 322 tagtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccc 381 ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||| || Sbjct: 151 tagtacaggaatattaacctgtttgccatcgacgacgccattcggcctagtcttaggtcc 92 Query: 382 tgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggat 441 ||||| |||| || ||||||||||| | ||||||| |||| ||||||||||||||||||| Sbjct: 91 tgactaaccccccatggacgaacctagtggaggaacccttaggttttcggggcattggat 32 Query: 442 tctcaccaatgttttcgttactcaagccgac 472 ||||||||||||||||||||||||||||||| Sbjct: 31 tctcaccaatgttttcgttactcaagccgac 1 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggta 47 |||| ||| ||||||||||||||| |||||||||| Sbjct: 378 taccaacctacctgtgtcggtttcaggtacaggta 344
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 180 bits (91), Expect = 4e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| ||||| |||||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 114014 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 114073 Query: 384 actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 442 ||||||||| ||||||||| |||| || | |||| |||| |||||||||||||||||||| Sbjct: 114074 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 114133 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 |||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 114134 ctcaccaatgttttcgctactcaagccgacattctcacttccg 114176 Score = 180 bits (91), Expect = 4e-42 Identities = 146/163 (89%), Gaps = 1/163 (0%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| ||||| |||||| ||| |||||||||||||||||||||||| |||||| |||| Sbjct: 3503 gtacgggaattttgacccgttatccatcgactacgcctttcggcctcgccttaggtcctg 3444 Query: 384 actcaccctccgtggacgaaccttgcgga-ggaaaccttgggttttcggggcattggatt 442 ||||||||| ||||||||| |||| || | |||| |||| |||||||||||||||||||| Sbjct: 3443 actcacccttcgtggacgagccttccgaaaggaacccttaggttttcggggcattggatt 3384 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccg 485 |||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 3383 ctcaccaatgttttcgctactcaagccgacattctcacttccg 3341 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 554 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 613 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| | ||||| || Sbjct: 114254 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcaggagcgcttga 114313 Query: 614 tcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 114314 ccagtgagctattacgcactctttaa 114339 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 554 acatcccacagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcga 613 ||||||||||||||||||| || |||||| ||| ||||| ||| ||||| | ||||| || Sbjct: 3263 acatcccacagcttcggcaaatagcttagtcccattcattttcggcgcaggagcgcttga 3204 Query: 614 tcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 3203 ccagtgagctattacgcactctttaa 3178 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 17 tacccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||||| ||||||||| Sbjct: 113767 tacccacctgtgtcggttttgggtacagg 113795 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 17 tacccacctgtgtcggtttcgggtacagg 45 ||||||||||||||||||| ||||||||| Sbjct: 3750 tacccacctgtgtcggttttgggtacagg 3722 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 526 cggaacgctcccctaccgatg 546 ||||||||||||||||||||| Sbjct: 114217 cggaacgctcccctaccgatg 114237 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 526 cggaacgctcccctaccgatg 546 ||||||||||||||||||||| Sbjct: 3300 cggaacgctcccctaccgatg 3280
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||||| |||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 1430 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 1371 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| ||||||| ||||||||||||| | ||||| |||| ||||||||||||| ||||| Sbjct: 1370 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 1311 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1310 ctcaccgatgttttcgttactcaaaccgacattctcacttccgcttcgtc 1261 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 1132 cagtgagctattacgcactctttaa 1108 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| || |||||| ||||||||||||||| Sbjct: 1654 tacctacctacttgtgtcagtttcgggtacaggt 1621
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 178 bits (90), Expect = 1e-41 Identities = 147/166 (88%) Strand = Plus / Minus Query: 327 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 386 ||||||| |||||||| | ||||||||||| |||||||| || |||||| ||||||| Sbjct: 1390 caggaatgttgacctgcttgccatcgactacacctttcggtcttgccttaggtcctgact 1331 Query: 387 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 446 ||||||| ||||||||||| | | ||||| |||| |||||||||||||||||||||||| Sbjct: 1330 aaccctccatggacgaacctagtgaaggaacccttaggttttcggggcattggattctca 1271 Query: 447 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 1270 ccaatgttttcgttactcaaaccgacattctcacttccgcttcgtc 1225 Score = 69.9 bits (35), Expect = 1e-08 Identities = 95/115 (82%) Strand = Plus / Minus Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 ||||||||||||||||||||| || || ||||||||||||||||| || ||||| | Sbjct: 1192 gcggaacgctcccctaccgatatcttacgatatcccacagcttcggcaaatttcttagtc 1133 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactctttaa 639 ||| ||| ||| |||||| |||| | ||||||||||||||||||||||||| Sbjct: 1132 ccgagcattttcggcgcaaaaacgcttaaccagtgagctattacgcactctttaa 1078 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| || |||||| ||||||||||||||| Sbjct: 1586 tacctacctacttgtgtcagtttcgggtacaggt 1553
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 178 bits (90), Expect = 1e-41 Identities = 150/170 (88%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccct 382 ||||||||||| |||||||||| ||||||||||| |||||||| || |||||| ||| Sbjct: 3168 agtacaggaatgttgacctgtttgccatcgactacacctttcggtcttgccttaggtcct 3109 Query: 383 gactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggatt 442 |||| ||||||| ||||||||||||| | ||||| |||| ||||||||||||| ||||| Sbjct: 3108 gactaaccctccatggacgaaccttgtgaaggaacccttaggttttcggggcaaaggatt 3049 Query: 443 ctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||||| ||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 3048 ctcaccgatgttttcgttactcaaaccgacattctcacttccgcttcgtc 2999 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 615 cagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||| Sbjct: 2870 cagtgagctattacgcactctttaa 2846 Score = 44.1 bits (22), Expect = 0.56 Identities = 31/34 (91%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| || |||||| ||||||||||||||| Sbjct: 3392 tacctacctacttgtgtcagtttcgggtacaggt 3359
>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA Length = 212 Score = 178 bits (90), Expect = 1e-41 Identities = 121/130 (93%), Gaps = 1/130 (0%) Strand = Plus / Plus Query: 362 ttcggcctgatcttaggccctgactcaccctccgtggacgaaccttgcggaggaaacctt 421 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 64 ttcggcctgatgataggccctgactcaccctccgtggac-aaccttgcggaggaaccctt 122 Query: 422 gggttttcggggcattggattctcaccaatgttttcgttactcaagccgacattctcgct 481 |||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 123 aggttttcgaggcattggattctcaccaacgtttgcgttactcaagccgacattctcgct 182 Query: 482 tccgcttcgt 491 |||| ||||| Sbjct: 183 tccgattcgt 192
>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome Length = 119704 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 48953 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 49012 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 49013 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 49072 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 49073 ccacctatattttcgttactcaagccgacattctcacttctgcttcgtc 49121 Score = 176 bits (89), Expect = 6e-41 Identities = 149/169 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 |||| |||||||| ||| |||||||||||||||||| |||| |||| |||||| |||| Sbjct: 5406 gtacgggaatattaacccgttgtccatcgactacgcttttcagcctcgccttaggtcctg 5347 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| |||| ||||||||||||||||||||||||| || |||||| Sbjct: 5346 acttaccctccgcggacgagccttccggaggaaaccttgggttttcggggtataggattc 5287 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttccgcttcgtc 492 |||| || |||||||||||||||||||||||||| |||| |||||||| Sbjct: 5286 ccacctatattttcgttactcaagccgacattctcacttctgcttcgtc 5238 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 609 ctcgatcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||||||| Sbjct: 49246 ctcgatcagtgagctattacgcactctttaa 49276 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 609 ctcgatcagtgagctattacgcactctttaa 639 ||||||||||||||||||||||||||||||| Sbjct: 5113 ctcgatcagtgagctattacgcactctttaa 5083 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Plus Query: 13 tacctacccacctgtgtcggtt 34 |||||||||||||||||||||| Sbjct: 48732 tacctacccacctgtgtcggtt 48753 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtt 34 |||||||||||||||||||||| Sbjct: 5627 tacctacccacctgtgtcggtt 5606
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 176 bits (89), Expect = 6e-41 Identities = 152/173 (87%) Strand = Plus / Minus Query: 327 caggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctgact 386 |||||||||| ||||| | ||||||||||||||| |||||||| |||||| | ||||| Sbjct: 3682 caggaatattaacctgatttccatcgactacgcccttcggccttgccttaggtcttgact 3623 Query: 387 caccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattctca 446 ||||| | ||||||| ||| | | ||||| |||| ||||||| |||||||||||||||| Sbjct: 3622 aacccttcatggacgagcctagtgaaggaacccttaggttttcagggcattggattctca 3563 Query: 447 ccaatgttttcgttactcaagccgacattctcgcttccgcttcgtcgaccccc 499 |||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 3562 ccaatgttttcgttactcaagccgacattctcacttccgcttcgtccaccccc 3510
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 176 bits (89), Expect = 6e-41 Identities = 177/205 (86%), Gaps = 1/205 (0%) Strand = Plus / Minus Query: 289 tagcctcctccgtccctccgtaccaa-caaggggtagtacaggaatattgacctgttgtc 347 |||||| ||||||||||| ||||||| ||| | ||||||||||| || |||||||| | Sbjct: 1444 tagccttctccgtccctcggtaccaaacaatttgcagtacaggaatgttaacctgttggc 1385 Query: 348 catcgactacgcctttcggcctgatcttaggccctgactcaccctccgtggacgaacctt 407 ||||| ||||||||||||||| |||||| ||||||||||||||| ||||||| ||| Sbjct: 1384 catcggatacgcctttcggcctctccttaggtcctgactcaccctccatggacgagccta 1325 Query: 408 gcggaggaaaccttgggttttcggggcattggattctcaccaatgttttcgttactcaag 467 | ||||| |||| ||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 1324 ctgaaggaacccttaggttttcggagcattggattctcaccaatgtttgcgttactcaag 1265 Query: 468 ccgacattctcgcttccgcttcgtc 492 ||||||||||| ||||||| ||||| Sbjct: 1264 ccgacattctcacttccgcctcgtc 1240 Score = 99.6 bits (50), Expect = 1e-17 Identities = 98/113 (86%), Gaps = 2/113 (1%) Strand = Plus / Minus Query: 525 gcggaacgctcccctaccgatgcattttgacatcccacagcttcggcagatcgcttagcc 584 |||||||||||||||||||||| || |||| |||||||||||||| ||||||| | Sbjct: 1207 gcggaacgctcccctaccgatga--ttcaccatctcacagcttcggcaggccgcttagtc 1150 Query: 585 ccgttcatcttcagcgcaagggcgctcgatcagtgagctattacgcactcttt 637 |||||||| ||| ||||||| ||||| || ||||||||||||||||||||||| Sbjct: 1149 ccgttcattttcggcgcaagagcgcttgaccagtgagctattacgcactcttt 1097 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 13 tacctacccacctgtgtcggtttcgggtacaggt 46 |||||||| |||||||||||||| |||||||||| Sbjct: 1611 tacctacctacctgtgtcggtttagggtacaggt 1578
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 320997 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 320938 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 320937 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 320878 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 320877 tcacccatgttttcgctactcaagccgacattctcacttc 320838 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Minus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||||||||| ||| ||||| | ||||||| ||||||| Sbjct: 320762 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtgag 320703 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 320702 ctattacgcactc 320690 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 321213 cccacctgtgtcggtttcgggtac 321190
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3420 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3361 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3360 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3301 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3300 tcacccatgttttcgctactcaagccgacattctcacttc 3261 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 3185 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 3126 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 3125 ctattacgcactc 3113 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 3636 cccacctgtgtcggtttcgggtac 3613
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3421 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3362 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3361 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3302 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3301 tcacccatgttttcgctactcaagccgacattctcacttc 3262 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 3186 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 3127 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 3126 ctattacgcactc 3114 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 3637 cccacctgtgtcggtttcgggtac 3614
>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4141 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 3645 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 3586 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 3585 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 3526 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 3525 tcacccatgttttcgctactcaagccgacattctcacttc 3486 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 3410 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 3351 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 3350 ctattacgcactc 3338 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 3861 cccacctgtgtcggtttcgggtac 3838
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 19460 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 19519 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 19520 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 19579 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 19580 tcacccatgttttcgctactcaagccgacattctcacttc 19619 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||||||||| ||| ||||| | ||||||| ||||||| Sbjct: 19695 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtgag 19754 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 19755 ctattacgcactc 19767 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 19244 cccacctgtgtcggtttcgggtac 19267
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Plus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 1214 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 1273 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 1274 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 1333 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 1334 tcacccatgttttcgctactcaagccgacattctcacttc 1373 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||||||||| ||| ||||| | ||||||| ||||||| Sbjct: 1449 cagcttcggtataacgcttagccccgttcattttcggcgcaggatcgctcgaccagtgag 1508 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 1509 ctattacgcactc 1521 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 998 cccacctgtgtcggtttcgggtac 1021
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 174 bits (88), Expect = 2e-40 Identities = 142/160 (88%) Strand = Plus / Minus Query: 324 gtacaggaatattgacctgttgtccatcgactacgcctttcggcctgatcttaggccctg 383 ||||||||||||||||||||| |||||||||||||||||||||||| |||||| || | Sbjct: 316486 gtacaggaatattgacctgttatccatcgactacgcctttcggcctcgccttaggtccag 316427 Query: 384 actcaccctccgtggacgaaccttgcggaggaaaccttgggttttcggggcattggattc 443 ||| |||||||| |||||| ||| |||||||| |||| || ||||||||||| |||||| Sbjct: 316426 actaaccctccgcggacgagcctgccggaggaacccttagggtttcggggcatgggattc 316367 Query: 444 tcaccaatgttttcgttactcaagccgacattctcgcttc 483 ||||| ||||||||| ||||||||||||||||||| |||| Sbjct: 316366 tcacccatgttttcgctactcaagccgacattctcacttc 316327 Score = 65.9 bits (33), Expect = 2e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 562 cagcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgag 621 ||||||||| | | ||||||||||| ||||| ||| ||||| | ||||||| ||||||| Sbjct: 316251 cagcttcggtataacgcttagccccattcattttcggcgcaggatcgctcgaccagtgag 316192 Query: 622 ctattacgcactc 634 ||||||||||||| Sbjct: 316191 ctattacgcactc 316179 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 19 cccacctgtgtcggtttcgggtac 42 |||||||||||||||||||||||| Sbjct: 316702 cccacctgtgtcggtttcgggtac 316679
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 371 atcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcg 430 |||||||| ||||||||||||||| ||||||||||| | ||||||| |||| | ||||| Sbjct: 1379 atcttaggacctgactcaccctccatggacgaacctagtggaggaacccttagactttcg 1320 Query: 431 gggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcg 490 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1319 gggcattggattctcaccaatgttttcgttactcaagccgacattctcacttccgccccg 1260 Query: 491 tcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctacc 542 || || || |||| ||| | |||||| ||| ||||||||||||||||||| Sbjct: 1259 tccacaccggcttacgctgatgcttcactcgttggcggaacgctcccctacc 1208 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 563 agcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagc 622 ||||||||||| ||||||| |||| |||| ||| ||||||| |||| | |||||||| Sbjct: 1176 agcttcggcaggccgcttagtcccgatcattttcggcgcaagaacgctttaccagtgagc 1117 Query: 623 tattacgcactctttaa 639 ||||||||||||||||| Sbjct: 1116 tattacgcactctttaa 1100 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactac 357 |||||||||||||| ||||||| |||||||||||| Sbjct: 1431 agtacaggaatattaacctgttttccatcgactac 1397 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 |||||||||||||| |||||||||| Sbjct: 1661 acctgtgtcggtttggggtacaggt 1637
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 174 bits (88), Expect = 2e-40 Identities = 151/172 (87%) Strand = Plus / Minus Query: 371 atcttaggccctgactcaccctccgtggacgaaccttgcggaggaaaccttgggttttcg 430 |||||||| ||||||||||||||| ||||||||||| | ||||||| |||| | ||||| Sbjct: 3261 atcttaggacctgactcaccctccatggacgaacctagtggaggaacccttagactttcg 3202 Query: 431 gggcattggattctcaccaatgttttcgttactcaagccgacattctcgcttccgcttcg 490 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct: 3201 gggcattggattctcaccaatgttttcgttactcaagccgacattctcacttccgccccg 3142 Query: 491 tcgacccccgctttcgcggttgcttccctctaaggcggaacgctcccctacc 542 || || || |||| ||| | |||||| ||| ||||||||||||||||||| Sbjct: 3141 tccacaccggcttacgctgatgcttcactcgttggcggaacgctcccctacc 3090 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 563 agcttcggcagatcgcttagccccgttcatcttcagcgcaagggcgctcgatcagtgagc 622 ||||||||||| ||||||| |||| |||| ||| ||||||| |||| | |||||||| Sbjct: 3058 agcttcggcaggccgcttagtcccgatcattttcggcgcaagaacgctttaccagtgagc 2999 Query: 623 tattacgcactctttaa 639 ||||||||||||||||| Sbjct: 2998 tattacgcactctttaa 2982 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 323 agtacaggaatattgacctgttgtccatcgactac 357 |||||||||||||| ||||||| |||||||||||| Sbjct: 3313 agtacaggaatattaacctgttttccatcgactac 3279 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 22 acctgtgtcggtttcgggtacaggt 46 |||||||||||||| |||||||||| Sbjct: 3542 acctgtgtcggtttggggtacaggt 3518 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,431,807 Number of Sequences: 3902068 Number of extensions: 3431807 Number of successful extensions: 61609 Number of sequences better than 10.0: 1970 Number of HSP's better than 10.0 without gapping: 1990 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 48327 Number of HSP's gapped (non-prelim): 12732 length of query: 639 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 616 effective length of database: 17,143,297,704 effective search space: 10560271385664 effective search space used: 10560271385664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
