ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd14j23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550056.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2362 Score = 295 bits (149), Expect = 7e-77 Identities = 268/308 (87%), Gaps = 6/308 (1%) Strand = Plus / Plus Query: 85 acccacatcttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaac 144 ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| Sbjct: 1127 acccacatcttcacctacgaggagctcgacgaggctaccgacggcttcagcgacgcccgg 1186 Query: 145 gagctcggcgccggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtg 204 |||||||||| |||||||||||| ||||| ||||| || | |||||| | ||| | | Sbjct: 1187 gagctcggcgtcggcggcttcggcacagtgtacaaagggatactccggaatggggacacg 1246 Query: 205 gtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgccaacgag 264 |||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 1247 gtggcggtgaagcggctgtacaagaacagctacaagagcgtggagcaattccagaacgag 1306 Query: 265 gtggacatcctctcgcggctgcgccacccaaacctcgtcgcgctctacggctgcacct-- 322 |||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 1307 gtgggcatcctgtcgcggctgcgccacccaaacctcgtcacgctcttcggctgcacgtcg 1366 Query: 323 ----cctcctgccgcgacctcctcctcgtctacgagttcgtccccaacggcacgctcgcc 378 || | |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1367 cagaccaacagccgcgacctgctcctcgtctacgagttcgtccccaacggcacgctcgcc 1426 Query: 379 gaccacct 386 |||||||| Sbjct: 1427 gaccacct 1434 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 430 tggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacctccac 486 |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1472 tggccgacgcggctcggcatcgccgtcgagacggccagcgcgctggagtacctccac 1528
>dbj|AK072170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129P20, full insert sequence Length = 2362 Score = 295 bits (149), Expect = 7e-77 Identities = 268/308 (87%), Gaps = 6/308 (1%) Strand = Plus / Plus Query: 85 acccacatcttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaac 144 ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| Sbjct: 1127 acccacatcttcacctacgaggagctcgacgaggctaccgacggcttcagcgacgcccgg 1186 Query: 145 gagctcggcgccggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtg 204 |||||||||| |||||||||||| ||||| ||||| || | |||||| | ||| | | Sbjct: 1187 gagctcggcgtcggcggcttcggcacagtgtacaaagggatactccggaatggggacacg 1246 Query: 205 gtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgccaacgag 264 |||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| Sbjct: 1247 gtggcggtgaagcggctgtacaagaacagctacaagagcgtggagcaattccagaacgag 1306 Query: 265 gtggacatcctctcgcggctgcgccacccaaacctcgtcgcgctctacggctgcacct-- 322 |||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 1307 gtgggcatcctgtcgcggctgcgccacccaaacctcgtcacgctcttcggctgcacgtcg 1366 Query: 323 ----cctcctgccgcgacctcctcctcgtctacgagttcgtccccaacggcacgctcgcc 378 || | |||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1367 cagaccaacagccgcgacctgctcctcgtctacgagttcgtccccaacggcacgctcgcc 1426 Query: 379 gaccacct 386 |||||||| Sbjct: 1427 gaccacct 1434 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 430 tggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacctccac 486 |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1472 tggccgacgcggctcggcatcgccgtcgagacggccagcgcgctggagtacctccac 1528
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 218 bits (110), Expect = 1e-53 Identities = 169/189 (89%), Gaps = 6/189 (3%) Strand = Plus / Minus Query: 204 ggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgccaacga 263 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 1977539 ggtggcggtgaagcggctgtacaagaacagctacaagagcgtggagcaattccagaacga 1977480 Query: 264 ggtggacatcctctcgcggctgcgccacccaaacctcgtcgcgctctacggctgcacct- 322 ||||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 1977479 ggtgggcatcctgtcgcggctgcgccacccaaacctcgtcacgctcttcggctgcacgtc 1977420 Query: 323 -----cctcctgccgcgacctcctcctcgtctacgagttcgtccccaacggcacgctcgc 377 || | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1977419 gcagaccaacagccgcgacctgctcctcgtctacgagttcgtccccaacggcacgctcgc 1977360 Query: 378 cgaccacct 386 ||||||||| Sbjct: 1977359 cgaccacct 1977351 Score = 109 bits (55), Expect = 9e-21 Identities = 85/95 (89%) Strand = Plus / Minus Query: 85 acccacatcttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaac 144 ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| Sbjct: 1977745 acccacatcttcacctacgaggagctcgacgaggctaccgacggcttcagcgacgcccgg 1977686 Query: 145 gagctcggcgccggcggcttcgggacagtctacaa 179 |||||||||| |||||||||||| ||||| ||||| Sbjct: 1977685 gagctcggcgtcggcggcttcggcacagtgtacaa 1977651 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 193 gacgggagcgtggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcag 252 |||||| |||||||||||||||||||||||||||| ||||||||| | | ||||||||| Sbjct: 28477514 gacgggcgcgtggtggcggtgaagcggctgtacaacaacagctaccggcgggtggagcag 28477455 Query: 253 ttcgccaacgaggtggacatcctctcgcggctgcgccacccaaacct 299 |||| ||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 28477454 ttcgtgaacgaggcggcgatcctgtcgcggctgcggcacccgaacct 28477408 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 430 tggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacctccac 486 |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1977313 tggccgacgcggctcggcatcgccgtcgagacggccagcgcgctggagtacctccac 1977257 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 28477290 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 28477231 Query: 483 ccacgc 488 |||||| Sbjct: 28477230 ccacgc 28477225 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 28477364 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 28477318 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 92 tcttcacctacgaggagctcgacgcggccaccga 125 |||||| ||||||||||||||| | ||||||||| Sbjct: 28477712 tcttcagctacgaggagctcgaggaggccaccga 28477679 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||| ||||| || || |||||||| Sbjct: 42552029 gctcggcgccggcggtttcggcaccgtgtacaaggg 42552064 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaac 366 ||||||||||||| |||||||||| Sbjct: 31469186 ctcgtctacgagtacgtccccaac 31469163 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggca 370 ||||||||||||||| | |||||||||| Sbjct: 1868345 ctcgtctacgagttcatgcccaacggca 1868372
>dbj|AP003250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443D08 Length = 146670 Score = 218 bits (110), Expect = 1e-53 Identities = 169/189 (89%), Gaps = 6/189 (3%) Strand = Plus / Minus Query: 204 ggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgccaacga 263 ||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||| Sbjct: 40117 ggtggcggtgaagcggctgtacaagaacagctacaagagcgtggagcaattccagaacga 40058 Query: 264 ggtggacatcctctcgcggctgcgccacccaaacctcgtcgcgctctacggctgcacct- 322 ||||| |||||| ||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 40057 ggtgggcatcctgtcgcggctgcgccacccaaacctcgtcacgctcttcggctgcacgtc 39998 Query: 323 -----cctcctgccgcgacctcctcctcgtctacgagttcgtccccaacggcacgctcgc 377 || | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 39997 gcagaccaacagccgcgacctgctcctcgtctacgagttcgtccccaacggcacgctcgc 39938 Query: 378 cgaccacct 386 ||||||||| Sbjct: 39937 cgaccacct 39929 Score = 109 bits (55), Expect = 9e-21 Identities = 85/95 (89%) Strand = Plus / Minus Query: 85 acccacatcttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaac 144 ||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||| Sbjct: 40323 acccacatcttcacctacgaggagctcgacgaggctaccgacggcttcagcgacgcccgg 40264 Query: 145 gagctcggcgccggcggcttcgggacagtctacaa 179 |||||||||| |||||||||||| ||||| ||||| Sbjct: 40263 gagctcggcgtcggcggcttcggcacagtgtacaa 40229 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 430 tggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacctccac 486 |||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct: 39891 tggccgacgcggctcggcatcgccgtcgagacggccagcgcgctggagtacctccac 39835
>ref|XM_475858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2739 Score = 155 bits (78), Expect = 2e-34 Identities = 177/210 (84%) Strand = Plus / Plus Query: 93 cttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcgg 152 |||| |||||||||||||||| | |||||||||||||||| ||| |||| ||||||||| Sbjct: 1752 cttcgcctacgaggagctcgaggaggccaccgacggcttcagcgacgcccgcgagctcgg 1811 Query: 153 cgccggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtggtggcggt 212 || |||||||||||| || |||||||| |||| ||||| || || |||||||||| || Sbjct: 1812 cgacggcggcttcggcaccgtctacaaaggtgagctccgagatggacgcgtggtggccgt 1871 Query: 213 gaagcggctgtacaagaacagctacaagggcgtggagcagttcgccaacgaggtggacat 272 |||| |||||||||| ||||||| | | | ||||||||||||| ||||||| || || Sbjct: 1872 gaagaggctgtacaacaacagctgccggcgagtggagcagttcgtgaacgaggcggcgat 1931 Query: 273 cctctcgcggctgcgccacccaaacctcgt 302 || ||||||||||||||||| |||||||| Sbjct: 1932 actgtcgcggctgcgccacccgaacctcgt 1961 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgctggcatacctccacgc 488 ||||||||||| | |||||||||||||| ||||||||||| Sbjct: 2102 tcgccgtcgaggccgccgccgcgctggcgtacctccacgc 2141
>ref|NM_192128.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2064 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 157 ggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtggtggcggtgaag 216 ||||||||||| || |||||||| || | || || |||||| ||||||||||||||||| Sbjct: 1132 ggcggcttcggcaccgtctacaaagggatacttcgagacgggcgcgtggtggcggtgaag 1191 Query: 217 cggctgtacaagaacagctacaagggcgtggagcagttcgccaacgaggtggacatcctc 276 ||||||||||| ||||||||| | | ||||||||||||| ||||||| || ||||| Sbjct: 1192 cggctgtacaacaacagctaccggcgggtggagcagttcgtgaacgaggcggcgatcctg 1251 Query: 277 tcgcggctgcgccacccaaacct 299 ||||||||||| ||||| ||||| Sbjct: 1252 tcgcggctgcggcacccgaacct 1274 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 1392 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 1451 Query: 483 ccacgc 488 |||||| Sbjct: 1452 ccacgc 1457 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 1318 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 1364
>dbj|AK102164.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086H03, full insert sequence Length = 2351 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 157 ggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtggtggcggtgaag 216 ||||||||||| || |||||||| || | || || |||||| ||||||||||||||||| Sbjct: 1167 ggcggcttcggcaccgtctacaaagggatacttcgagacgggcgcgtggtggcggtgaag 1226 Query: 217 cggctgtacaagaacagctacaagggcgtggagcagttcgccaacgaggtggacatcctc 276 ||||||||||| ||||||||| | | ||||||||||||| ||||||| || ||||| Sbjct: 1227 cggctgtacaacaacagctaccggcgggtggagcagttcgtgaacgaggcggcgatcctg 1286 Query: 277 tcgcggctgcgccacccaaacct 299 ||||||||||| ||||| ||||| Sbjct: 1287 tcgcggctgcggcacccgaacct 1309 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 1427 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 1486 Query: 483 ccacgc 488 |||||| Sbjct: 1487 ccacgc 1492 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 1353 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 1399
>dbj|AK100606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107H09, full insert sequence Length = 2419 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 157 ggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtggtggcggtgaag 216 ||||||||||| || |||||||| || | || || |||||| ||||||||||||||||| Sbjct: 1236 ggcggcttcggcaccgtctacaaagggatacttcgagacgggcgcgtggtggcggtgaag 1295 Query: 217 cggctgtacaagaacagctacaagggcgtggagcagttcgccaacgaggtggacatcctc 276 ||||||||||| ||||||||| | | ||||||||||||| ||||||| || ||||| Sbjct: 1296 cggctgtacaacaacagctaccggcgggtggagcagttcgtgaacgaggcggcgatcctg 1355 Query: 277 tcgcggctgcgccacccaaacct 299 ||||||||||| ||||| ||||| Sbjct: 1356 tcgcggctgcggcacccgaacct 1378 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 1496 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 1555 Query: 483 ccacgc 488 |||||| Sbjct: 1556 ccacgc 1561 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 1422 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 1468
>dbj|AK066381.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063B19, full insert sequence Length = 3864 Score = 109 bits (55), Expect = 9e-21 Identities = 121/143 (84%) Strand = Plus / Plus Query: 157 ggcggcttcgggacagtctacaagggtgttctccgggacgggagcgtggtggcggtgaag 216 ||||||||||| || |||||||| || | || || |||||| ||||||||||||||||| Sbjct: 2727 ggcggcttcggcaccgtctacaaagggatacttcgagacgggcgcgtggtggcggtgaag 2786 Query: 217 cggctgtacaagaacagctacaagggcgtggagcagttcgccaacgaggtggacatcctc 276 ||||||||||| ||||||||| | | ||||||||||||| ||||||| || ||||| Sbjct: 2787 cggctgtacaacaacagctaccggcgggtggagcagttcgtgaacgaggcggcgatcctg 2846 Query: 277 tcgcggctgcgccacccaaacct 299 ||||||||||| ||||| ||||| Sbjct: 2847 tcgcggctgcggcacccgaacct 2869 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 2987 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 3046 Query: 483 ccacgc 488 |||||| Sbjct: 3047 ccacgc 3052 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 2913 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 2959
>dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C09 Length = 170226 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 193 gacgggagcgtggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcag 252 |||||| |||||||||||||||||||||||||||| ||||||||| | | ||||||||| Sbjct: 3953 gacgggcgcgtggtggcggtgaagcggctgtacaacaacagctaccggcgggtggagcag 3894 Query: 253 ttcgccaacgaggtggacatcctctcgcggctgcgccacccaaacct 299 |||| ||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 3893 ttcgtgaacgaggcggcgatcctgtcgcggctgcggcacccgaacct 3847 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 3729 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 3670 Query: 483 ccacgc 488 |||||| Sbjct: 3669 ccacgc 3664 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 3803 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 3757 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 92 tcttcacctacgaggagctcgacgcggccaccga 125 |||||| ||||||||||||||| | ||||||||| Sbjct: 4151 tcttcagctacgaggagctcgaggaggccaccga 4118
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 101 bits (51), Expect = 2e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 193 gacgggagcgtggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcag 252 |||||| |||||||||||||||||||||||||||| ||||||||| | | ||||||||| Sbjct: 192614 gacgggcgcgtggtggcggtgaagcggctgtacaacaacagctaccggcgggtggagcag 192555 Query: 253 ttcgccaacgaggtggacatcctctcgcggctgcgccacccaaacct 299 |||| ||||||| || ||||| ||||||||||| ||||| ||||| Sbjct: 192554 ttcgtgaacgaggcggcgatcctgtcgcggctgcggcacccgaacct 192508 Score = 60.0 bits (30), Expect = 7e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 423 gctctcgtggccgacccggctcggcatcgccgtcgagacggccgccgcgctggcatacct 482 ||||||||||||| ||| ||| ||||||||||||| ||||||||||||| | ||||| Sbjct: 192390 gctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacct 192331 Query: 483 ccacgc 488 |||||| Sbjct: 192330 ccacgc 192325 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||| || ||||||||||| ||||||||||| | ||||||||||| Sbjct: 192464 ctcctggtgtacgagttcgtggccaacggcacggtggccgaccacct 192418 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Minus Query: 92 tcttcacctacgaggagctcgacgcggccaccga 125 |||||| ||||||||||||||| | ||||||||| Sbjct: 192812 tcttcagctacgaggagctcgaggaggccaccga 192779
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 93 cttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcgg 152 |||| |||||||||||||||| | |||||||||||||||| ||| |||| ||||||||| Sbjct: 20300 cttcgcctacgaggagctcgaggaggccaccgacggcttcagcgacgcccgcgagctcgg 20359 Query: 153 cgccggcggcttcgggacagtctacaa 179 || |||||||||||| || |||||||| Sbjct: 20360 cgacggcggcttcggcaccgtctacaa 20386 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 200 gcgtggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgcca 259 |||||||||| |||||| |||||||||| ||||||| | | | ||||||||||||| | Sbjct: 20822 gcgtggtggccgtgaagaggctgtacaacaacagctgccggcgagtggagcagttcgtga 20881 Query: 260 acgaggtggacatcctctcgcggctgcgccacccaaacctcgt 302 |||||| || || || ||||||||||||||||| |||||||| Sbjct: 20882 acgaggcggcgatactgtcgcggctgcgccacccgaacctcgt 20924 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgctggcatacctccacgc 488 ||||||||||| | |||||||||||||| ||||||||||| Sbjct: 21065 tcgccgtcgaggccgccgccgcgctggcgtacctccacgc 21104
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 93 cttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcgg 152 |||| |||||||||||||||| | |||||||||||||||| ||| |||| ||||||||| Sbjct: 76728 cttcgcctacgaggagctcgaggaggccaccgacggcttcagcgacgcccgcgagctcgg 76787 Query: 153 cgccggcggcttcgggacagtctacaa 179 || |||||||||||| || |||||||| Sbjct: 76788 cgacggcggcttcggcaccgtctacaa 76814 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 200 gcgtggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgcca 259 |||||||||| |||||| |||||||||| ||||||| | | | ||||||||||||| | Sbjct: 77250 gcgtggtggccgtgaagaggctgtacaacaacagctgccggcgagtggagcagttcgtga 77309 Query: 260 acgaggtggacatcctctcgcggctgcgccacccaaacctcgt 302 |||||| || || || ||||||||||||||||| |||||||| Sbjct: 77310 acgaggcggcgatactgtcgcggctgcgccacccgaacctcgt 77352 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgctggcatacctccacgc 488 ||||||||||| | |||||||||||||| ||||||||||| Sbjct: 77493 tcgccgtcgaggccgccgccgcgctggcgtacctccacgc 77532
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 93.7 bits (47), Expect = 5e-16 Identities = 77/87 (88%) Strand = Plus / Plus Query: 93 cttcacctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcgg 152 |||| |||||||||||||||| | |||||||||||||||| ||| |||| ||||||||| Sbjct: 27145332 cttcgcctacgaggagctcgaggaggccaccgacggcttcagcgacgcccgcgagctcgg 27145391 Query: 153 cgccggcggcttcgggacagtctacaa 179 || |||||||||||| || |||||||| Sbjct: 27145392 cgacggcggcttcggcaccgtctacaa 27145418 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 200 gcgtggtggcggtgaagcggctgtacaagaacagctacaagggcgtggagcagttcgcca 259 |||||||||| |||||| |||||||||| ||||||| | | | ||||||||||||| | Sbjct: 27145854 gcgtggtggccgtgaagaggctgtacaacaacagctgccggcgagtggagcagttcgtga 27145913 Query: 260 acgaggtggacatcctctcgcggctgcgccacccaaacctcgt 302 |||||| || || || ||||||||||||||||| |||||||| Sbjct: 27145914 acgaggcggcgatactgtcgcggctgcgccacccgaacctcgt 27145956 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 349 tacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||||||| |||||||||||||||| ||||||||||| Sbjct: 14619846 tacgagttcatccccaacggcacgctggccgaccacct 14619883 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgctggcatacctccacgc 488 ||||||||||| | |||||||||||||| ||||||||||| Sbjct: 27146097 tcgccgtcgaggccgccgccgcgctggcgtacctccacgc 27146136 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||||||||| Sbjct: 25415120 cctcctcgtctacgagttcgtccccaac 25415147 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 447 catcgccgtcgagacggccgccgcgct 473 |||||||| |||||||||||||||||| Sbjct: 1648079 catcgccgccgagacggccgccgcgct 1648053 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gccgcgacctcctcctcgtc 348 |||||||||||||||||||| Sbjct: 27880588 gccgcgacctcctcctcgtc 27880607 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cggcaatgccggcggcggcg 412 |||||||||||||||||||| Sbjct: 24147581 cggcaatgccggcggcggcg 24147562 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||| | ||||||||| |||||| Sbjct: 20618616 tcctcgtctacgacttcatgcccaacggcgcgctcg 20618581
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 25059071 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 25059117 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 gcgacctcctcctcgtctacga 353 |||||||||||||||||||||| Sbjct: 23752027 gcgacctcctcctcgtctacga 23752006 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 27022083 ctcggcgccggcggcttcgg 27022102 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 25734646 gcgagctcctcctcgtctacgagctcatgcccaacg 25734681 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 25691122 gcgagctcctcctcgtctacgagctcatgcccaacg 25691157
>emb|AL713904.3|CNS07YQ4 Oryza sativa chromosome 12, . BAC OJ1306_H03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121563 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 72408 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 72362
>dbj|AK121185.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084P22, full insert sequence Length = 2394 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1409 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 1455
>dbj|AK101874.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070G15, full insert sequence Length = 2408 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1439 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 1485
>dbj|AK099661.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013066L14, full insert sequence Length = 2361 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1392 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 1438
>dbj|AK072425.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098M23, full insert sequence Length = 2497 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1482 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 1528
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 24987276 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 24987322 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 gcgacctcctcctcgtctacga 353 |||||||||||||||||||||| Sbjct: 23680226 gcgacctcctcctcgtctacga 23680205 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 26947672 ctcggcgccggcggcttcgg 26947691 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 25662822 gcgagctcctcctcgtctacgagctcatgcccaacg 25662857 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 25619298 gcgagctcctcctcgtctacgagctcatgcccaacg 25619333
>emb|AL928754.2|CNS08CBR Oryza sativa chromosome 12, . BAC OSJNBa0056D07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146686 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctc 387 |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 48097 tcctcgtctacgagttcgtccccaacggcacgctcgcccaccacctc 48051
>ref|XM_469978.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1308 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccacc 391 |||||||||||||| |||||||||||||| || ||| || |||||||||||| Sbjct: 601 ctcctcgtctacgacttcgtccccaacgggaccctctcccaccacctccacc 652 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 258 caacgaggtggacatcctctcgcggctgcgccacccaaacctcgtc 303 |||||||||| |||||||||| |||||||||||| |||||||| Sbjct: 519 caacgaggtgctcatcctctcggcgctgcgccacccgcacctcgtc 564
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccacc 391 |||||||||||||| |||||||||||||| || ||| || |||||||||||| Sbjct: 33156133 ctcctcgtctacgacttcgtccccaacgggaccctctcccaccacctccacc 33156184 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacg 367 ||||||||||||||||||||||||||||| Sbjct: 6635335 cctcctcgtctacgagttcgtccccaacg 6635363 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||||| | |||||||||||||| Sbjct: 6561293 tcctcgtctacgagttcatgcccaacggcacgct 6561326 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||| ||||| Sbjct: 20378373 cctcctcgtctacgagttcgtctccaac 20378400 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 258 caacgaggtggacatcctctcgcggctgcgccacccaaacctcgtc 303 |||||||||| |||||||||| |||||||||||| |||||||| Sbjct: 33156051 caacgaggtgctcatcctctcggcgctgcgccacccgcacctcgtc 33156096 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccc 362 |||||||||||||||||||| Sbjct: 31880348 ctcgtctacgagttcgtccc 31880329 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcatcgccgtcgagacggcc 465 |||||||||||||||||||| Sbjct: 6561383 gcatcgccgtcgagacggcc 6561402
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccacc 391 |||||||||||||| |||||||||||||| || ||| || |||||||||||| Sbjct: 33246643 ctcctcgtctacgacttcgtccccaacgggaccctctcccaccacctccacc 33246694 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacg 367 ||||||||||||||||||||||||||||| Sbjct: 6634548 cctcctcgtctacgagttcgtccccaacg 6634576 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||||| | |||||||||||||| Sbjct: 6560506 tcctcgtctacgagttcatgcccaacggcacgct 6560539 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||| ||||| Sbjct: 20371402 cctcctcgtctacgagttcgtctccaac 20371429 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 258 caacgaggtggacatcctctcgcggctgcgccacccaaacctcgtc 303 |||||||||| |||||||||| |||||||||||| |||||||| Sbjct: 33246561 caacgaggtgctcatcctctcggcgctgcgccacccgcacctcgtc 33246606 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccc 362 |||||||||||||||||||| Sbjct: 31970864 ctcgtctacgagttcgtccc 31970845 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcatcgccgtcgagacggcc 465 |||||||||||||||||||| Sbjct: 6560596 gcatcgccgtcgagacggcc 6560615
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccacc 391 |||||||||||||| |||||||||||||| || ||| || |||||||||||| Sbjct: 88422 ctcctcgtctacgacttcgtccccaacgggaccctctcccaccacctccacc 88371 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Minus Query: 258 caacgaggtggacatcctctcgcggctgcgccacccaaacctcgtc 303 |||||||||| |||||||||| |||||||||||| |||||||| Sbjct: 88504 caacgaggtgctcatcctctcggcgctgcgccacccgcacctcgtc 88459
>ref|NM_194513.1| Oryza sativa (japonica cultivar-group) putative protein kinase (OSJNBa0071K19.13), mRNA Length = 1707 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 913 ctcgtctacgagttcgtccccaacggcaccctcg 946
>ref|XM_472608.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||||||| | ||||||||||| ||| ||||||||||||| Sbjct: 1688 tcctcgtctacgagttcatgcccaacggcaccctccacgaccacctccac 1737
>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0059K16, complete sequence Length = 139615 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 349 tacgagttcgtccccaacggcacgctcgccgaccacct 386 ||||||||| |||||||||||||||| ||||||||||| Sbjct: 36140 tacgagttcatccccaacggcacgctggccgaccacct 36177
>gb|AC069324.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0071K19, complete sequence Length = 174752 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 117589 ctcgtctacgagttcgtccccaacggcaccctcg 117556
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 352531 ctcgtctacgagttcgtccccaacggcaccctcg 352498
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||||||| | ||||||||||| ||| ||||||||||||| Sbjct: 21888343 tcctcgtctacgagttcatgcccaacggcaccctccacgaccacctccac 21888294 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgg 167 ||||||||||||||||||||| Sbjct: 33461143 gctcggcgccggcggcttcgg 33461163 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 192 ggacgggagcgtggtggcggtgaagcggctgt 223 ||||||||||| || |||||||||||||||| Sbjct: 33421153 ggacgggagcgccgtcgcggtgaagcggctgt 33421184
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 352531 ctcgtctacgagttcgtccccaacggcaccctcg 352498 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 gacctcctcctcgtctacgagttcgtccccaacggca 370 ||||||||||| |||||||||||| | ||||| |||| Sbjct: 20246256 gacctcctcctggtctacgagttcatgcccaatggca 20246292 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 21171711 ctcggcgccggcggcttcgg 21171730 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 |||||||||||| || ||||||| ||| |||||||| Sbjct: 15364712 gctcggcgccggaggattcgggagagtgtacaaggg 15364747
>emb|AL606452.2|OSJN00007 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000114_01, complete sequence Length = 127713 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||||||| | ||||||||||| ||| ||||||||||||| Sbjct: 72944 tcctcgtctacgagttcatgcccaacggcaccctccacgaccacctccac 72895
>dbj|AK109788.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D03, full insert sequence Length = 2846 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||||||| | ||||||||||| ||| ||||||||||||| Sbjct: 1785 tcctcgtctacgagttcatgcccaacggcaccctccacgaccacctccac 1834
>dbj|AK100339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081I19, full insert sequence Length = 2160 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 1134 ctcgtctacgagttcgtccccaacggcaccctcg 1167
>dbj|AK071821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114J15, full insert sequence Length = 1977 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 1134 ctcgtctacgagttcgtccccaacggcaccctcg 1167
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 7e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||||||||||||||||||| |||| Sbjct: 352528 ctcgtctacgagttcgtccccaacggcaccctcg 352495 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 gacctcctcctcgtctacgagttcgtccccaacggca 370 ||||||||||| |||||||||||| | ||||| |||| Sbjct: 20257532 gacctcctcctggtctacgagttcatgcccaatggca 20257568 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 21182975 ctcggcgccggcggcttcgg 21182994 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 |||||||||||| || ||||||| ||| |||||||| Sbjct: 15372953 gctcggcgccggaggattcgggagagtgtacaaggg 15372988
>ref|NM_187616.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 5286 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacg 367 ||||||||||||||||||||||||||||| Sbjct: 4332 cctcctcgtctacgagttcgtccccaacg 4360
>gb|AC104473.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1626B05, complete sequence Length = 127946 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacg 367 ||||||||||||||||||||||||||||| Sbjct: 20883 cctcctcgtctacgagttcgtccccaacg 20911
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||||||||| Sbjct: 55481 cctcctcgtctacgagttcgtccccaac 55508
>dbj|AK110196.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-B01, full insert sequence Length = 3070 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||||||||| Sbjct: 1574 cctcctcgtctacgagttcgtccccaac 1601
>ref|XM_476579.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1554 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctcca 389 ||||||||||||||| |||||||||||| |||| |||| |||||||||| Sbjct: 669 cctcctcgtctacgacttcgtccccaaccgcactctcgaacaccacctcca 719
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctcca 389 ||||||||||||||| |||||||||||| |||| |||| |||||||||| Sbjct: 2026052 cctcctcgtctacgacttcgtccccaaccgcactctcgaacaccacctcca 2026002 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||||||||| || || |||||||| Sbjct: 2165184 gctcggcgccggcggcttcggcaccgtgtacaaggg 2165149 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacgg 368 ||||| ||||||||||||||||| | || |||||||| Sbjct: 22883018 gcgacttcctcctcgtctacgagctggtgcccaacgg 22883054 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gctcgccgaccacctccacc 391 |||||||||||||||||||| Sbjct: 21050913 gctcgccgaccacctccacc 21050932 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 15323884 cggcggcgccaacgagctcgccgccggc 15323911 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 15316016 cggcggcgccaacgagctcgccgccggc 15316043 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 15305944 cggcggcgccaacgagctcgccgccggc 15305971 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||| ||||||||| Sbjct: 2161740 gctcggcgccggcgtcttcgggac 2161717
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggca 370 |||||||||||||||||| |||||||||||| Sbjct: 17161171 ctcctcgtctacgagttcctccccaacggca 17161201 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||| |||||| |||||| |||||| Sbjct: 16546641 cctcctcgtctacgacttcgtctccaacgacacgct 16546676 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||||||||| || || |||||||| Sbjct: 7337605 gctcggcgccggcggcttcggcaccgtgtacaaggg 7337570 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 gtctacgagttcgtccccaacggcac 371 |||||||||||||||||||| ||||| Sbjct: 29275999 gtctacgagttcgtccccaatggcac 29275974 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 347 tctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||||||||||| |||| Sbjct: 16363103 tctacgagttcgttcccaacggcaccctcg 16363074 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 gacctcctcctcgtctacgagttc 357 ||||| |||||||||||||||||| Sbjct: 5645143 gacctgctcctcgtctacgagttc 5645120
>dbj|AP004688.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036C11 Length = 137995 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggca 370 |||||||||||||||||| |||||||||||| Sbjct: 9898 ctcctcgtctacgagttcctccccaacggca 9928
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctcca 389 ||||||||||||||| |||||||||||| |||| |||| |||||||||| Sbjct: 110349 cctcctcgtctacgacttcgtccccaaccgcactctcgaacaccacctcca 110299
>dbj|AK105608.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B02, full insert sequence Length = 1743 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggca 370 |||||||||||||||||| |||||||||||| Sbjct: 684 ctcctcgtctacgagttcctccccaacggca 714 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 139 gccaacgagctcggcgccggcggcttcgggacagtctacaagggtgttctcc 190 |||||| ||||||||| ||||||||||| | ||||||| ||| ||||||| Sbjct: 480 gccaacaagctcggcgagggcggcttcggccccgtctacaggggcgttctcc 531
>dbj|AK069969.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038O14, full insert sequence Length = 1691 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacggca 370 |||||||||||||||||| |||||||||||| Sbjct: 626 ctcctcgtctacgagttcctccccaacggca 656 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 139 gccaacgagctcggcgccggcggcttcgggacagtctacaagggtgttctcc 190 |||||| ||||||||| ||||||||||| | ||||||| ||| ||||||| Sbjct: 422 gccaacaagctcggcgagggcggcttcggccccgtctacaggggcgttctcc 473
>ref|XM_479865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2182 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 1321 ctcctcctcgtctacgagctcgtccccaac 1350
>ref|NM_187607.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2115 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||||| | |||||||||||||| Sbjct: 1226 tcctcgtctacgagttcatgcccaacggcacgct 1259 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcatcgccgtcgagacggcc 465 |||||||||||||||||||| Sbjct: 1316 gcatcgccgtcgagacggcc 1335
>gb|AC107226.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0081P02, complete sequence Length = 162425 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||||| | |||||||||||||| Sbjct: 104055 tcctcgtctacgagttcatgcccaacggcacgct 104088 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcatcgccgtcgagacggcc 465 |||||||||||||||||||| Sbjct: 104145 gcatcgccgtcgagacggcc 104164
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 1335676 ctcctcctcgtctacgagctcgtccccaac 1335647 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 1295691 ctcctcctcgtctacgagctcgtccccaac 1295662 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtc 360 ||||||||||||||||||||| Sbjct: 20560866 ctcctcgtctacgagttcgtc 20560846 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgct 473 |||||| |||||||||||||||||| Sbjct: 757624 tcgccggcgagacggccgccgcgct 757648 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||| | | |||||||||| |||| ||||| ||||||| Sbjct: 17644321 ctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccac 17644274 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 |||||| |||||||||| | || ||||||||||||| ||| ||||||||| Sbjct: 17552031 cctccttgtctacgagtacatcgacaacggcacgctctacgatcacctccac 17551980 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggca 370 ||||| ||||||| |||||||||||||| Sbjct: 16912488 ctcgtgtacgagtacgtccccaacggca 16912461
>dbj|AP005730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0073J19 Length = 165174 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 164983 ctcctcctcgtctacgagctcgtccccaac 164954 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 124998 ctcctcctcgtctacgagctcgtccccaac 124969
>dbj|AP004254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1126_D10 Length = 90631 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 28033 ctcctcctcgtctacgagctcgtccccaac 28004
>dbj|AK101690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059I12, full insert sequence Length = 2260 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||||| | |||||||||||||| Sbjct: 1234 tcctcgtctacgagttcatgcccaacggcacgct 1267 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 gcatcgccgtcgagacggcc 465 |||||||||||||||||||| Sbjct: 1324 gcatcgccgtcgagacggcc 1343
>dbj|AK098961.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068L11, full insert sequence Length = 2382 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 1321 ctcctcctcgtctacgagctcgtccccaac 1350
>dbj|AK059130.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-G07, full insert sequence Length = 2438 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 337 ctcctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||| ||||||||||| Sbjct: 1377 ctcctcctcgtctacgagctcgtccccaac 1406
>ref|XM_468446.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1543 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 719 cgagttcgtccccaacggcacgctc 743
>ref|XM_507058.1| PREDICTED Oryza sativa (japonica cultivar-group), P0474F11.23 mRNA Length = 1630 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 741 cgagttcgtccccaacggcacgctc 765
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 35282751 cgagttcgtccccaacggcacgctc 35282727 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 catcctctcgcggctgcgcc 289 |||||||||||||||||||| Sbjct: 20554996 catcctctcgcggctgcgcc 20554977 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtggtggcggtgaagcggct 221 |||||||||||||||||||| Sbjct: 7221401 gtggtggcggtgaagcggct 7221382
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 33085 cgagttcgtccccaacggcacgctc 33061
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 94801 cgagttcgtccccaacggcacgctc 94777
>dbj|AK112048.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-D12, full insert sequence Length = 1630 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 741 cgagttcgtccccaacggcacgctc 765
>dbj|AK099147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055C13, full insert sequence Length = 1545 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 351 cgagttcgtccccaacggcacgctc 375 ||||||||||||||||||||||||| Sbjct: 720 cgagttcgtccccaacggcacgctc 744
>ref|NM_184772.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||| ||||| Sbjct: 711 cctcctcgtctacgagttcgtctccaac 738
>ref|XM_476608.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1704 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||||||||| || || |||||||| Sbjct: 532 gctcggcgccggcggcttcggcaccgtgtacaaggg 567
>gb|AC136448.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0077O14, complete sequence Length = 124915 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||||||||||||| Sbjct: 1719 gctcggcgccggcggcttcgggac 1696
>gb|AC136501.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0044M15, complete sequence Length = 144568 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||||||||||||| Sbjct: 103489 gctcggcgccggcggcttcgggac 103466
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||||||||||||| Sbjct: 10714113 gctcggcgccggcggcttcgggac 10714136 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 94 ttcacctacgaggagctcgacgcggccaccgacggcttc 132 |||||||||| |||||||| ||||| |||||||||||| Sbjct: 19887943 ttcacctacgcggagctcgcggcggcgaccgacggcttc 19887981 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 gtggtggcggtgaagcggctgt 223 |||||||||||||||||||||| Sbjct: 6934953 gtggtggcggtgaagcggctgt 6934932 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 tggtggcggtgaagcggctgt 223 ||||||||||||||||||||| Sbjct: 24687772 tggtggcggtgaagcggctgt 24687792
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacg 367 |||||||||||||||| ||||||||||| Sbjct: 14409352 ctcctcgtctacgagtacgtccccaacg 14409379 Score = 40.1 bits (20), Expect = 6.9 Identities = 68/84 (80%) Strand = Plus / Minus Query: 99 ctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcggcgccgg 158 |||||| |||||| | || |||||| |||||||| || |||| | ||||||||| || Sbjct: 20665803 ctacgacgagctccaggccgccaccaacggcttcagccgcgcccagaagctcggcgaggg 20665744 Query: 159 cggcttcgggacagtctacaaggg 182 ||||||||| | ||||||||||| Sbjct: 20665743 cggcttcggcagcgtctacaaggg 20665720 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 329 gccgcgacctcctcctcgtctacg 352 |||||||||||| ||||||||||| Sbjct: 18524669 gccgcgacctccgcctcgtctacg 18524646
>gb|AC084319.5|AC084319 Oryza sativa chromosome 3 BAC OSJNBa0004B24 genomic sequence, complete sequence Length = 152883 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||| ||||| Sbjct: 22673 cctcctcgtctacgagttcgtctccaac 22700
>dbj|AP004728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0583E12 Length = 152449 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgct 374 ||||||||||||||| |||||| |||||| |||||| Sbjct: 42621 cctcctcgtctacgacttcgtctccaacgacacgct 42656
>dbj|AP004862.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B11 Length = 166004 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||||||||| || || |||||||| Sbjct: 44190 gctcggcgccggcggcttcggcaccgtgtacaaggg 44155
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacg 367 |||||||||||||||| ||||||||||| Sbjct: 101155 ctcctcgtctacgagtacgtccccaacg 101182
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtccccaacg 367 |||||||||||||||| ||||||||||| Sbjct: 8917 ctcctcgtctacgagtacgtccccaacg 8944
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||||||||| || || |||||||| Sbjct: 33086 gctcggcgccggcggcttcggcaccgtgtacaaggg 33051 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||| ||||||||| Sbjct: 29642 gctcggcgccggcgtcttcgggac 29619
>dbj|AK109559.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-B02, full insert sequence Length = 1534 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||||||||||||| Sbjct: 166 gctcggcgccggcggcttcgggac 189
>dbj|AK099276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105H10, full insert sequence Length = 2393 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||| ||||| Sbjct: 1441 cctcctcgtctacgagttcgtctccaac 1468
>dbj|AK070389.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048I16, full insert sequence Length = 2466 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaac 366 |||||||||||||||||||||| ||||| Sbjct: 1514 cctcctcgtctacgagttcgtctccaac 1541
>dbj|AK068992.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G08, full insert sequence Length = 1707 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||||||||| || || |||||||| Sbjct: 533 gctcggcgccggcggcttcggcaccgtgtacaaggg 568
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||||||||||||| Sbjct: 10793423 gctcggcgccggcggcttcgggac 10793446 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 94 ttcacctacgaggagctcgacgcggccaccgacggcttc 132 |||||||||| |||||||| ||||| |||||||||||| Sbjct: 20172916 ttcacctacgcggagctcgcggcggcgaccgacggcttc 20172954 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 gtggtggcggtgaagcggctgt 223 |||||||||||||||||||||| Sbjct: 7001420 gtggtggcggtgaagcggctgt 7001399 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 tggtggcggtgaagcggctgt 223 ||||||||||||||||||||| Sbjct: 24999442 tggtggcggtgaagcggctgt 24999462
>gb|AC130598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0056I11, complete sequence Length = 145796 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 447 catcgccgtcgagacggccgccgcgct 473 |||||||| |||||||||||||||||| Sbjct: 100239 catcgccgccgagacggccgccgcgct 100213
>gb|AC137753.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084M23, complete sequence Length = 134180 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 94 ttcacctacgaggagctcgacgcggccaccgacggcttc 132 |||||||||| |||||||| ||||| |||||||||||| Sbjct: 128241 ttcacctacgcggagctcgcggcggcgaccgacggcttc 128279
>gb|AC136956.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038B22, complete sequence Length = 177557 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 94 ttcacctacgaggagctcgacgcggccaccgacggcttc 132 |||||||||| |||||||| ||||| |||||||||||| Sbjct: 65004 ttcacctacgcggagctcgcggcggcgaccgacggcttc 65042
>gb|AC136971.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032K12, complete sequence Length = 166936 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 202 gtggtggcggtgaagcggctgt 223 |||||||||||||||||||||| Sbjct: 60211 gtggtggcggtgaagcggctgt 60190
>gb|AY330485.1| Saccharopolyspora erythraea amino acid permease gene, partial cds; transport protein, helix-turn-helix regulator (pkeRI), P450 monooxygenase (pkePI), P450 monooxygenase (pkePII), P450 monooxygenase (pkePIII), type I PKS (pkeAI), type I PKS (pkeAII), and type I PKS (pkeAIII) genes, complete cds; pkeAIV gene, complete sequence; type I PKS, monooxygenases, transporter, ketoacyl-ACP synthase (typeII), acyl carrier protien, amino transferase, and DNA-binding protein genes, complete cds; and unknown genes Length = 68451 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 102 cgaggagctcgacgcggccaccgacg 127 |||||| ||||||||||||||||||| Sbjct: 22122 cgaggacctcgacgcggccaccgacg 22147
>gb|AF445776.1|AF445776 Triticum aestivum clone KSUK952 kinase R-like protein gene, partial sequence Length = 493 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 gtctacgagttcgtccccaacggcac 371 ||||||||||||||||| |||||||| Sbjct: 350 gtctacgagttcgtcccaaacggcac 325
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 315 ctgcacctcctcctgccgcgac 336 |||||||||||||||||||||| Sbjct: 4524295 ctgcacctcctcctgccgcgac 4524316 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 433 ccgacccggctcggcatcgcc 453 ||||||||||||||||||||| Sbjct: 1875210 ccgacccggctcggcatcgcc 1875190 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 456 cgagacggccgccgcgctgg 475 |||||||||||||||||||| Sbjct: 2552315 cgagacggccgccgcgctgg 2552334
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 346 gtctacgagttcgtccccaacggcac 371 |||||||||||||||||||| ||||| Sbjct: 38797 gtctacgagttcgtccccaatggcac 38772
>dbj|AP004012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1568_D07 Length = 83857 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 347 tctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||||||||||| |||| Sbjct: 58204 tctacgagttcgttcccaacggcaccctcg 58175
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Minus Query: 347 tctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||||||||||| |||| Sbjct: 39666 tctacgagttcgttcccaacggcaccctcg 39637
>dbj|AK111558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054D24, full insert sequence Length = 3492 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 202 gtggtggcggtgaagcggctgt 223 |||||||||||||||||||||| Sbjct: 2456 gtggtggcggtgaagcggctgt 2477
>dbj|AK105669.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A03, full insert sequence Length = 2627 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 202 gtggtggcggtgaagcggctgt 223 |||||||||||||||||||||| Sbjct: 1510 gtggtggcggtgaagcggctgt 1531
>dbj|AK100169.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023P10, full insert sequence Length = 2671 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 347 tctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||||||||||| |||| Sbjct: 1598 tctacgagttcgttcccaacggcaccctcg 1627
>gb|AY776278.1| Mangifera indica putative serine/threonine protein kinase (STK1) gene, partial cds Length = 531 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacgg 368 ||||||||||||||| |||||||||| Sbjct: 184 ctcgtctacgagttcatccccaacgg 209
>emb|AL844878.4|CNS08CB1 Oryza sativa chromosome 12, . BAC OSJNBb0036A19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128795 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacga 353 |||||||||||||||||||||| Sbjct: 3583 gcgacctcctcctcgtctacga 3604
>emb|AM076489.1| Cocos nucifera partial mRNA for receptor-like kinase (CnLI gene) Length = 225 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 192 ggacgggagcgtggtggcggtgaagcggct 221 ||||||| || ||||||||||||||||||| Sbjct: 49 ggacgggtgcatggtggcggtgaagcggct 78
>ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1941 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 340 ctcctcgtctacgagttcgtc 360 ||||||||||||||||||||| Sbjct: 1267 ctcctcgtctacgagttcgtc 1287
>ref|XM_479767.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1782 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgct 473 |||||| |||||||||||||||||| Sbjct: 672 tcgccggcgagacggccgccgcgct 696
>ref|XM_474172.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1260 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgg 167 ||||||||||||||||||||| Sbjct: 291 gctcggcgccggcggcttcgg 311
>ref|NM_197523.1| Oryza sativa (japonica cultivar-group) putative receptor-like protein kinase (OSJNBa0053C23.25), mRNA Length = 2025 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 gacctcctcctcgtctacgagttcgtccccaacggca 370 ||||||||||| |||||||||||| | ||||| |||| Sbjct: 1273 gacctcctcctggtctacgagttcatgcccaatggca 1309
>ref|XM_478768.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1957 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacgg 368 ||||| ||||||||||||||||| | || |||||||| Sbjct: 976 gcgacttcctcctcgtctacgagctggtgcccaacgg 1012
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0090F16, complete sequence Length = 147341 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 tggtggcggtgaagcggctgt 223 ||||||||||||||||||||| Sbjct: 134716 tggtggcggtgaagcggctgt 134696
>gb|AF521085.1| Streptomyces nanchangensis NS3226 polyether ionophore nanchangmycin biosynthetic gene cluster, complete sequence Length = 132544 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 cgctgcgcaaggagttcaacc 67 ||||||||||||||||||||| Sbjct: 129637 cgctgcgcaaggagttcaacc 129657
>emb|AL606446.1|OSJN00016 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F16, complete sequence Length = 119535 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgg 167 ||||||||||||||||||||| Sbjct: 107022 gctcggcgccggcggcttcgg 107042 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 192 ggacgggagcgtggtggcggtgaagcggctgt 223 ||||||||||| || |||||||||||||||| Sbjct: 67032 ggacgggagcgccgtcgcggtgaagcggctgt 67063
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 334 gacctcctcctcgtctacgagttcgtccccaacggca 370 ||||||||||| |||||||||||| | ||||| |||| Sbjct: 123991 gacctcctcctggtctacgagttcatgcccaatggca 124027
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 393 cggcaatgccggcggcggcga 413 ||||||||||||||||||||| Sbjct: 145606 cggcaatgccggcggcggcga 145586
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 197 ggagcgtggtggcggtgaagc 217 ||||||||||||||||||||| Sbjct: 2450294 ggagcgtggtggcggtgaagc 2450314 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 cgccgtcgagacggccgccgcgct 473 |||| ||||||||||||||||||| Sbjct: 1669088 cgccctcgagacggccgccgcgct 1669111
>gb|AF378329.1| Schizochytrium sp. ATCC_20888 polyunsaturated fatty acid synthase subunit C gene, complete cds Length = 4512 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 tcttcacctacgaggagctcgacgc 116 |||||||| |||||||||||||||| Sbjct: 596 tcttcaccaacgaggagctcgacgc 620
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacgg 368 ||||| ||||||||||||||||| | || |||||||| Sbjct: 76285 gcgacttcctcctcgtctacgagctggtgcccaacgg 76321
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgct 473 |||||| |||||||||||||||||| Sbjct: 56844 tcgccggcgagacggccgccgcgct 56868
>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15 Length = 120419 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtc 360 ||||||||||||||||||||| Sbjct: 64827 ctcctcgtctacgagttcgtc 64807
>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1663_D06 Length = 139103 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 ctcctcgtctacgagttcgtc 360 ||||||||||||||||||||| Sbjct: 35238 ctcctcgtctacgagttcgtc 35218
>dbj|AK108637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H04, full insert sequence Length = 1957 Score = 42.1 bits (21), Expect = 1.7 Identities = 33/37 (89%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacgg 368 ||||| ||||||||||||||||| | || |||||||| Sbjct: 976 gcgacttcctcctcgtctacgagctggtgcccaacgg 1012
>dbj|AK106851.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A12, full insert sequence Length = 1782 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 449 tcgccgtcgagacggccgccgcgct 473 |||||| |||||||||||||||||| Sbjct: 672 tcgccggcgagacggccgccgcgct 696
>emb|AL606685.3|OSJN00090 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071I13, complete sequence Length = 152264 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgg 167 ||||||||||||||||||||| Sbjct: 37332 gctcggcgccggcggcttcgg 37352
>ref|NM_118259.2| Arabidopsis thaliana ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase/ sugar binding AT4G21390 mRNA, complete cds Length = 2760 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 170 cagtctacaagggtgttctc 189 |||||||||||||||||||| Sbjct: 1734 cagtctacaagggtgttctc 1753
>gb|AY557468.1| Graneledone verrucosa 18S ribosomal RNA gene, complete sequence Length = 2675 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 1968 cgacggcttcggcgccgcca 1949
>gb|AY557467.1| Eledone cirrhosa 18S ribosomal RNA gene, complete sequence Length = 2826 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 2122 cgacggcttcggcgccgcca 2103
>gb|AY557465.1| Bathypolypus arcticus 18S ribosomal RNA gene, complete sequence Length = 2675 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 1999 cgacggcttcggcgccgcca 1980
>gb|AY557463.1| Japetella diaphana 18S ribosomal RNA gene, complete sequence Length = 2774 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 2026 cgacggcttcggcgccgcca 2007
>ref|XM_550037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2376 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggca 370 ||||||||||||||| | |||||||||| Sbjct: 1639 ctcgtctacgagttcatgcccaacggca 1666
>ref|NM_188885.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1038 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggca 370 ||||| ||||||| |||||||||||||| Sbjct: 364 ctcgtgtacgagtacgtccccaacggca 391
>ref|XM_482082.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3262 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||| | | |||||||||| |||| ||||| ||||||| Sbjct: 2326 ctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccac 2373
>ref|XM_482068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 927 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 |||||| |||||||||| | || ||||||||||||| ||| ||||||||| Sbjct: 264 cctccttgtctacgagtacatcgacaacggcacgctctacgatcacctccac 315
>ref|XM_474165.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1047 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 192 ggacgggagcgtggtggcggtgaagcggctgt 223 ||||||||||| || |||||||||||||||| Sbjct: 237 ggacgggagcgccgtcgcggtgaagcggctgt 268
>ref|NM_184908.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccc 362 |||||||||||||||||||| Sbjct: 526 ctcgtctacgagttcgtccc 545
>ref|XM_466126.1| Oryza sativa (japonica cultivar-group), mRNA Length = 984 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 catcctctcgcggctgcgcc 289 |||||||||||||||||||| Sbjct: 282 catcctctcgcggctgcgcc 263
>ref|XM_464764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3722 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gtggtggcggtgaagcggct 221 |||||||||||||||||||| Sbjct: 2167 gtggtggcggtgaagcggct 2186
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 116 ctcggcgccggcggcttcgg 97
>ref|NM_196701.1| Oryza sativa (japonica cultivar-group) putative serine/threonine-specific kinase like protein (OSJNBa0046P18.10), mRNA Length = 2844 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 |||||||||||| || ||||||| ||| |||||||| Sbjct: 1083 gctcggcgccggaggattcgggagagtgtacaaggg 1118
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 gccgacccggctcggcatcgccgt 455 |||||||| ||||||||||||||| Sbjct: 2965274 gccgaccccgctcggcatcgccgt 2965297 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 cgtcgagacggccgccgcgctggc 476 ||||| |||||||||||||||||| Sbjct: 1029886 cgtcgcgacggccgccgcgctggc 1029863
>ref|NM_191238.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1833 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaac 366 ||||||||||||| |||||||||| Sbjct: 1099 ctcgtctacgagtacgtccccaac 1122
>ref|NM_189391.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 735 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||| ||||| || || |||||||| Sbjct: 453 gctcggcgccggcggtttcggcaccgtgtacaaggg 488
>ref|NM_187084.1| Oryza sativa (japonica cultivar-group), mRNA Length = 852 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 462 cggcggcgccaacgagctcgccgccggc 489
>ref|NM_187081.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1215 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 565 cggcggcgccaacgagctcgccgccggc 592
>ref|XM_476607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1456 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||| ||||||||| Sbjct: 332 gctcggcgccggcgtcttcgggac 355
>gb|AC109595.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1212_B02, complete sequence Length = 125650 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||| | ||||||||| |||||| Sbjct: 40656 tcctcgtctacgacttcatgcccaacggcgcgctcg 40621
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cggcaatgccggcggcggcg 412 |||||||||||||||||||| Sbjct: 33819 cggcaatgccggcggcggcg 33800
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 144469 ctcggcgccggcggcttcgg 144488
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 329 gccgcgacctcctcctcgtc 348 |||||||||||||||||||| Sbjct: 111005 gccgcgacctcctcctcgtc 111024
>ref|XM_957650.1| Neurospora crassa OR74A hypothetical protein (NCU05655.1) partial mRNA Length = 1818 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 128 gcttcggcgccgccaacgagctcggcgccggcggct 163 ||||| ||| || |||| |||||||||||||||||| Sbjct: 146 gcttccgcgtcgtcaacaagctcggcgccggcggct 181
>ref|XM_325509.1| Neurospora crassa OR74A hypothetical protein (NCU05655.1) partial mRNA Length = 1818 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 128 gcttcggcgccgccaacgagctcggcgccggcggct 163 ||||| ||| || |||| |||||||||||||||||| Sbjct: 146 gcttccgcgtcgtcaacaagctcggcgccggcggct 181
>ref|NM_080627.1| Homo sapiens chromosome 20 open reading frame 117 (C20orf117), transcript variant 1, mRNA Length = 6528 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cgacgcggccaccgacggct 130 |||||||||||||||||||| Sbjct: 42 cgacgcggccaccgacggct 23
>gb|AY145376.1| Graneledone pacifica 18S ribosomal RNA gene, partial sequence Length = 2740 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 2006 cgacggcttcggcgccgcca 1987
>gb|AY145366.1| Benthoctopus yaquinae 18S ribosomal RNA gene, partial sequence Length = 2986 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 2109 cgacggcttcggcgccgcca 2090
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 393 cggcaatgccggcggcggcg 412 |||||||||||||||||||| Sbjct: 107271 cggcaatgccggcggcggcg 107252
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 435 gacccggctcggcatcgccg 454 |||||||||||||||||||| Sbjct: 2469011 gacccggctcggcatcgccg 2468992
>gb|AY243802.1| Zea mays aquaporin (PIP2-5) mRNA, complete cds Length = 1104 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| ||||||||||||| |||||||| Sbjct: 468 cggcggcgccaacgagctcagcgccggc 495
>ref|XM_542984.2| PREDICTED: Canis familiaris similar to C34E11.3 (LOC485860), mRNA Length = 4902 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 cgacgcggccaccgacggct 130 |||||||||||||||||||| Sbjct: 468 cgacgcggccaccgacggct 449
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggctgcgccacccaaacctc 300 |||||||||||||||||||| Sbjct: 44873 ggctgcgccacccaaacctc 44854
>gb|AC124603.5| Mus musculus BAC clone RP23-52H14 from chromosome 14, complete sequence Length = 179891 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 ggctgcgccacccaaacctc 300 |||||||||||||||||||| Sbjct: 169341 ggctgcgccacccaaacctc 169322
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cggcaatgccggcggcggcg 412 |||||||||||||||||||| Sbjct: 2943498 cggcaatgccggcggcggcg 2943517
>emb|AL079335.29|HSJ132F21 Human DNA sequence from clone RP1-132F21 on chromosome 20 Contains the 5' end a novel gene, the C20orf118 gene, the 3' end of the SAMHD1 gene for SAM domain and HD domain 1 and a CpG island, complete sequence Length = 71117 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 cgacgcggccaccgacggct 130 |||||||||||||||||||| Sbjct: 23906 cgacgcggccaccgacggct 23925
>emb|X99514.1|PAMEXEFOP Pseudomonas aeruginosa mexE, mexF and oprN genes for hypothetical proteins, strain PAO1 Length = 6180 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 gacccggctcggcatcgccgtcga 458 |||||||||||||||| ||||||| Sbjct: 1810 gacccggctcggcatcaccgtcga 1833
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 gccgcgacctcctcctcgtc 348 |||||||||||||||||||| Sbjct: 149339 gccgcgacctcctcctcgtc 149320
>emb|AL022018.1|DMC8D8 Drosophila melanogaster cosmid clone 8D8 Length = 38397 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 37707 gaggtgtacatcatctcgcagctgcgccaccc 37676
>gb|AC104141.8| Drosophila melanogaster X BAC RP98-9H15 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181360 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 34098 gaggtgtacatcatctcgcagctgcgccaccc 34067
>gb|AE012113.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 21 of 460 of the complete genome Length = 11218 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccacggcaatgccggcggcg 409 |||||||||||||||||||| Sbjct: 9165 ccacggcaatgccggcggcg 9146
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 33995 ctcggcgccggcggcttcgg 33976
>ref|NM_058144.2| Drosophila melanogaster pan gu CG11420-RA (png), mRNA Length = 1126 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 252 gaggtgtacatcatctcgcagctgcgccaccc 283
>gb|AC104288.4| Drosophila melanogaster X BAC RP98-30G24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164252 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 93613 gaggtgtacatcatctcgcagctgcgccaccc 93582
>gb|AY071017.1| Drosophila melanogaster RE09533 full length cDNA Length = 1118 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 228 gaggtgtacatcatctcgcagctgcgccaccc 259
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 caccgacggcttcggcgccg 139 |||||||||||||||||||| Sbjct: 1740617 caccgacggcttcggcgccg 1740598
>emb|AL772391.18| Zebrafish DNA sequence from clone CH211-35J18 in linkage group 23, complete sequence Length = 146397 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 tgccggcggcggcgaccccc 418 |||||||||||||||||||| Sbjct: 44203 tgccggcggcggcgaccccc 44222
>gb|AY224427.1| Oryza sativa (japonica cultivar-group) isolate 20474 receptor kinase-like protein mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Plus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 |||||| |||||||||| | || ||||||||||||| ||| ||||||||| Sbjct: 507 cctccttgtctacgagtacatcgacaacggcacgctctacgatcacctccac 558
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 ccacggcaatgccggcggcg 409 |||||||||||||||||||| Sbjct: 230775 ccacggcaatgccggcggcg 230756
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcg 166 |||||||||||||||||||| Sbjct: 1587444 gctcggcgccggcggcttcg 1587425
>gb|AF130975.1|AF130975 Zea mays plasma membrane intrinsic protein (pip2-5) mRNA, complete cds Length = 1207 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| ||||||||||||| |||||||| Sbjct: 523 cggcggcgccaacgagctcagcgccggc 550
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 ccgacggcttcggcgccgcc 141 |||||||||||||||||||| Sbjct: 581057 ccgacggcttcggcgccgcc 581076
>emb|AJ606938.1| Eledone cirrhosa partial 18S rRNA gene Length = 2507 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 cgacggcttcggcgccgcca 142 |||||||||||||||||||| Sbjct: 1804 cgacggcttcggcgccgcca 1785
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 |||||||||||| || ||||||| ||| |||||||| Sbjct: 82075 gctcggcgccggaggattcgggagagtgtacaaggg 82110
>gb|AF306498.1|AF306498 Drosophila melanogaster protein kinase PAN GU (png) mRNA, complete cds Length = 1126 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 252 gaggtgtacatcatctcgcagctgcgccaccc 283
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 ||||||||||||||| ||||| || || |||||||| Sbjct: 72912 gctcggcgccggcggtttcggcaccgtgtacaaggg 72947
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaac 366 ||||||||||||| |||||||||| Sbjct: 63250 ctcgtctacgagtacgtccccaac 63227
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 acgagctcggcgccggcggc 162 |||||||||||||||||||| Sbjct: 8837541 acgagctcggcgccggcggc 8837522
>gb|AE004676.1| Pseudomonas aeruginosa PAO1, section 237 of 529 of the complete genome Length = 14928 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 435 gacccggctcggcatcgccgtcga 458 |||||||||||||||| ||||||| Sbjct: 10589 gacccggctcggcatcaccgtcga 10612
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 gctcgccgaccacctccacc 391 |||||||||||||||||||| Sbjct: 94212 gctcgccgaccacctccacc 94231
>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_A06 Length = 111673 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 30883 cggcggcgccaacgagctcgccgccggc 30910 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 23015 cggcggcgccaacgagctcgccgccggc 23042 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 12943 cggcggcgccaacgagctcgccgccggc 12970
>dbj|AP005092.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1112_E07 Length = 132055 Score = 40.1 bits (20), Expect = 6.9 Identities = 68/84 (80%) Strand = Plus / Minus Query: 99 ctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcggcgccgg 158 |||||| |||||| | || |||||| |||||||| || |||| | ||||||||| || Sbjct: 59414 ctacgacgagctccaggccgccaccaacggcttcagccgcgcccagaagctcggcgaggg 59355 Query: 159 cggcttcgggacagtctacaaggg 182 ||||||||| | ||||||||||| Sbjct: 59354 cggcttcggcagcgtctacaaggg 59331
>dbj|AP005314.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0515E01 Length = 140063 Score = 40.1 bits (20), Expect = 6.9 Identities = 68/84 (80%) Strand = Plus / Minus Query: 99 ctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcggcgccgg 158 |||||| |||||| | || |||||| |||||||| || |||| | ||||||||| || Sbjct: 131461 ctacgacgagctccaggccgccaccaacggcttcagccgcgcccagaagctcggcgaggg 131402 Query: 159 cggcttcgggacagtctacaaggg 182 ||||||||| | ||||||||||| Sbjct: 131401 cggcttcggcagcgtctacaaggg 131378
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 486 cgcgcaccaggtcctgcaccgcga 509 |||||||||| ||||||||||||| Sbjct: 5837867 cgcgcaccagctcctgcaccgcga 5837844 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 acgagctcggcgccggcggc 162 |||||||||||||||||||| Sbjct: 5645767 acgagctcggcgccggcggc 5645786
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggca 370 ||||||||||||||| | |||||||||| Sbjct: 109727 ctcgtctacgagttcatgcccaacggca 109754
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 gacctcctcctcgtctacgagttc 357 ||||| |||||||||||||||||| Sbjct: 37290 gacctgctcctcgtctacgagttc 37267
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 109897 cggcggcgccaacgagctcgccgccggc 109924 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 102029 cggcggcgccaacgagctcgccgccggc 102056 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 91957 cggcggcgccaacgagctcgccgccggc 91984
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtggtggcggtgaagcggct 221 |||||||||||||||||||| Sbjct: 121338 gtggtggcggtgaagcggct 121319
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 270 catcctctcgcggctgcgcc 289 |||||||||||||||||||| Sbjct: 50554 catcctctcgcggctgcgcc 50535
>dbj|AP004397.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B06 Length = 148947 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||| | | |||||||||| |||| ||||| ||||||| Sbjct: 120971 ctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccac 120924 Score = 40.1 bits (20), Expect = 6.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 339 cctcctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 |||||| |||||||||| | || ||||||||||||| ||| ||||||||| Sbjct: 28681 cctccttgtctacgagtacatcgacaacggcacgctctacgatcacctccac 28630
>dbj|AP003962.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1705_C03 Length = 118339 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||| | | |||||||||| |||| ||||| ||||||| Sbjct: 29710 ctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccac 29663
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccccaacggca 370 ||||| ||||||| |||||||||||||| Sbjct: 59499 ctcgtgtacgagtacgtccccaacggca 59472
>dbj|AK119601.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-E06, full insert sequence Length = 3046 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 gccgcgacctcctcctcgtctacg 352 |||||||||||| ||||||||||| Sbjct: 436 gccgcgacctccgcctcgtctacg 459
>dbj|AK111683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164N05, full insert sequence Length = 2227 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 202 gtggtggcggtgaagcggct 221 |||||||||||||||||||| Sbjct: 1029 gtggtggcggtgaagcggct 1010
>dbj|AK111620.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109J03, full insert sequence Length = 3722 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 202 gtggtggcggtgaagcggct 221 |||||||||||||||||||| Sbjct: 2167 gtggtggcggtgaagcggct 2186
>dbj|AK111497.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H21, full insert sequence Length = 1671 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 192 ggacgggagcgtggtggcggtgaagcggctgt 223 ||||||||||| || |||||||||||||||| Sbjct: 566 ggacgggagcgccgtcgcggtgaagcggctgt 597
>dbj|AK110453.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-166-E10, full insert sequence Length = 2368 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 334 gacctcctcctcgtctacgagttc 357 ||||| |||||||||||||||||| Sbjct: 1396 gacctgctcctcgtctacgagttc 1419
>dbj|AK110310.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-B04, full insert sequence Length = 2771 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 1306 gcgagctcctcctcgtctacgagctcatgcccaacg 1341
>dbj|AK108158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-G09, full insert sequence Length = 1117 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 393 cggcaatgccggcggcggcg 412 |||||||||||||||||||| Sbjct: 77 cggcaatgccggcggcggcg 96
>dbj|AK107367.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A12, full insert sequence Length = 2205 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 1327 gcgagctcctcctcgtctacgagctcatgcccaacg 1362
>dbj|AK106343.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G11, full insert sequence Length = 1456 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||| ||||||||| Sbjct: 332 gctcggcgccggcgtcttcgggac 355
>dbj|AK102983.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116A02, full insert sequence Length = 3714 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 gccgcgacctcctcctcgtctacg 352 |||||||||||| ||||||||||| Sbjct: 460 gccgcgacctccgcctcgtctacg 483
>dbj|AK102832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033109I17, full insert sequence Length = 2371 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaac 366 ||||||||||||| |||||||||| Sbjct: 1142 ctcgtctacgagtacgtccccaac 1165
>dbj|AK100330.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080J01, full insert sequence Length = 3067 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 329 gccgcgacctcctcctcgtctacg 352 |||||||||||| ||||||||||| Sbjct: 413 gccgcgacctccgcctcgtctacg 436
>dbj|AK072632.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132K03, full insert sequence Length = 1215 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 132 cggcgccgccaacgagctcggcgccggc 159 ||||| |||||||||||||| ||||||| Sbjct: 565 cggcggcgccaacgagctcgccgccggc 592
>dbj|AK072348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050N03, full insert sequence Length = 3262 Score = 40.1 bits (20), Expect = 6.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaacggcacgctcgccgaccacctccac 390 ||||||||||||| | | |||||||||| |||| ||||| ||||||| Sbjct: 2326 ctcgtctacgagtacatgcccaacggcagcctcggcgacctcctccac 2373
>dbj|AK071359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J23, full insert sequence Length = 2374 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 147 gctcggcgccggcggcttcgggacagtctacaaggg 182 |||||||||||| || ||||||| ||| |||||||| Sbjct: 1204 gctcggcgccggaggattcgggagagtgtacaaggg 1239
>dbj|AK070024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G05, full insert sequence Length = 1440 Score = 40.1 bits (20), Expect = 6.9 Identities = 68/84 (80%) Strand = Plus / Plus Query: 99 ctacgaggagctcgacgcggccaccgacggcttcggcgccgccaacgagctcggcgccgg 158 |||||| |||||| | || |||||| |||||||| || |||| | ||||||||| || Sbjct: 258 ctacgacgagctccaggccgccaccaacggcttcagccgcgcccagaagctcggcgaggg 317 Query: 159 cggcttcgggacagtctacaaggg 182 ||||||||| | ||||||||||| Sbjct: 318 cggcttcggcagcgtctacaaggg 341
>dbj|AK066000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049L02, full insert sequence Length = 2167 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 341 tcctcgtctacgagttcgtccccaacggcacgctcg 376 ||||||||||||| ||| | ||||||||| |||||| Sbjct: 1252 tcctcgtctacgacttcatgcccaacggcgcgctcg 1287
>dbj|AK064397.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G09, full insert sequence Length = 2364 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 ctcgtctacgagttcgtccccaac 366 ||||||||||||| |||||||||| Sbjct: 1126 ctcgtctacgagtacgtccccaac 1149
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctcggcgccggcggcttcgg 167 |||||||||||||||||||| Sbjct: 203 ctcggcgccggcggcttcgg 184
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 147 gctcggcgccggcggcttcgggac 170 |||||||||||||| ||||||||| Sbjct: 117533 gctcggcgccggcgtcttcgggac 117510
>gb|AF112365.1|AF112365 Streptomyces coelicolor M145 glycine-betaine ABC transport operon, complete sequence Length = 5022 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 gccgcgacctcctcctcgtc 348 |||||||||||||||||||| Sbjct: 2748 gccgcgacctcctcctcgtc 2729
>gb|AE003420.2| Drosophila melanogaster chromosome X, section 4 of 74 of the complete sequence Length = 308311 Score = 40.1 bits (20), Expect = 6.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 262 gaggtggacatcctctcgcggctgcgccaccc 293 |||||| ||||| |||||| |||||||||||| Sbjct: 204933 gaggtgtacatcatctcgcagctgcgccaccc 204902
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 catcgccgtcgagacggccg 466 |||||||||||||||||||| Sbjct: 723720 catcgccgtcgagacggccg 723739
>emb|AL731881.4|CNS08C8L Oryza sativa chromosome 12, . BAC OSJNBa0002L05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 167131 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 101884 gcgagctcctcctcgtctacgagctcatgcccaacg 101919 Score = 40.1 bits (20), Expect = 6.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 332 gcgacctcctcctcgtctacgagttcgtccccaacg 367 |||| |||||||||||||||||| || | ||||||| Sbjct: 58360 gcgagctcctcctcgtctacgagctcatgcccaacg 58395
>dbj|AP006117.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT09H13, TM0200, complete sequence Length = 91393 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 145 gagctcggcgccggcggctt 164 |||||||||||||||||||| Sbjct: 22176 gagctcggcgccggcggctt 22195
>gb|AC091494.9| Oryza sativa chromosome 3 BAC OSJNBa0070N04 genomic sequence, complete sequence Length = 150663 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 343 ctcgtctacgagttcgtccc 362 |||||||||||||||||||| Sbjct: 81601 ctcgtctacgagttcgtccc 81582
>gb|M64644.1|CFICENBAA C.fimi cenB gene, complete cds Length = 4056 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 gagacggccgccgcgctggc 476 |||||||||||||||||||| Sbjct: 836 gagacggccgccgcgctggc 855 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,651,807 Number of Sequences: 3902068 Number of extensions: 3651807 Number of successful extensions: 94325 Number of sequences better than 10.0: 219 Number of HSP's better than 10.0 without gapping: 251 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86232 Number of HSP's gapped (non-prelim): 8092 length of query: 509 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 487 effective length of database: 17,147,199,772 effective search space: 8350686288964 effective search space used: 8350686288964 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
