No.
Definition
Score (bits)
E Value
1 gb|AY177404.1| Secale cereale O-methyltransferase mRNA, complete...
547
e-152
2 gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome...
153
7e-34
3 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
153
7e-34
4 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
153
7e-34
5 gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1...
131
3e-27
6 dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon...
131
3e-27
7 dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon...
131
3e-27
8 gb|AY107519.1| Zea mays PCO078033 mRNA sequence
127
4e-26
9 gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome...
121
2e-24
10 gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome...
121
2e-24
11 dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon...
117
4e-23
12 gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome...
113
6e-22
13 dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon...
113
6e-22
14 ref|NM_191262.1| Oryza sativa (japonica cultivar-group), predic...
50
0.007
15 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.007
16 dbj|AP003268.4| Oryza sativa (japonica cultivar-group) genomic D...
50
0.007
17 dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.007
18 emb|AL939132.1|SCO939132 Streptomyces coelicolor A3(2) complete ...
44
0.45
19 gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...
42
1.8
20 gb|AC136786.4| Oryza sativa (japonica cultivar-group) chromosome...
42
1.8
21 dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...
42
1.8
22 emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl...
42
1.8
23 gb|AY701054.2| Streptomyces rimosus rimocidin synthase (rms) gen...
42
1.8
24 dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosy...
42
1.8
25 ref|XM_478005.1| Oryza sativa (japonica cultivar-group), mRNA
40
7.1
26 ref|XM_477999.1| Oryza sativa (japonica cultivar-group), mRNA
40
7.1
27 gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
40
7.1
28 gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
40
7.1
29 ref|XM_744633.1| Aspergillus fumigatus Af293 hypothetical protei...
40
7.1
30 ref|XM_816099.1| Trypanosoma cruzi strain CL Brener hypothetical...
40
7.1
31 emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g...
40
7.1
32 gb|AE005746.1| Caulobacter crescentus CB15 section 72 of 359 of ...
40
7.1
33 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
40
7.1
34 dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
40
7.1
35 dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic D...
40
7.1
36 dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic D...
40
7.1
37 gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...
40
7.1
>gb|AC138195.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0005P21, complete sequence
Length = 147381
Score = 153 bits (77), Expect = 7e-34
Identities = 95/101 (94%)
Strand = Plus / Plus
Query: 48 gatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacg 107
|||||||||||| |||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 63231 gatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacg 63290
Query: 108 tccatggggctccgctgcgccgtcaagctcggcatcccgac 148
|||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 63291 tccatgggcctccgctgcgccgtcgagctcggcatcccgac 63331
Score = 131 bits (66), Expect = 3e-27
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 36 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 95
|||||||||||||| || ||||||||||| || |||||||| ||||||||||||| ||||
Sbjct: 118915 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 118974
Query: 96 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 145
||||||||||| |||| ||| |||||||||||| ||||||| ||||||||
Sbjct: 118975 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 119024
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 363 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 422
||||||||||||||||||||||||||||||| |||||||| ||||||| | || || |||
Sbjct: 119239 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 119298
Query: 423 ctggggatggccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgag 482
|||||| ||| ||||||||||| ||||||||| | |||| | || || |||||||
Sbjct: 119299 ctggggctggacgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgag 119358
Query: 483 gacgtgcatagcgcgtcgctcttcgacgagagcac 517
|||||||| |||||||||| ||||||||||||||
Sbjct: 119359 gacgtgcacggcgcgtcgctgttcgacgagagcac 119393
Score = 117 bits (59), Expect = 4e-23
Identities = 77/83 (92%)
Strand = Plus / Minus
Query: 63 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 122
||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 131497 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 131438
Query: 123 tgcgccgtcaagctcggcatccc 145
|||||||||||||||||||||||
Sbjct: 131437 tgcgccgtcaagctcggcatccc 131415
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 200 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 249
||||||| ||||||| || ||||||||||||||| ||||||| |||||||
Sbjct: 119079 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 119128
Score = 52.0 bits (26), Expect = 0.002
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 433 ccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgaggacgtgcata 492
|||||||||||||||||||| | | ||||||||| ||| |||||||||| ||||
Sbjct: 63610 ccgagtggttcaagaaggacctggcgtcgccggtgccgtcgccgttcgaggacctgcacg 63669
Query: 493 gcgcgtcgctcttcgacgagagcacc 518
||||| ||| |||||||||||||||
Sbjct: 63670 gcgcgaggctgttcgacgagagcacc 63695
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 153 bits (77), Expect = 7e-34
Identities = 95/101 (94%)
Strand = Plus / Minus
Query: 48 gatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacg 107
|||||||||||| |||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 11550557 gatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacg 11550498
Query: 108 tccatggggctccgctgcgccgtcaagctcggcatcccgac 148
|||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 11550497 tccatgggcctccgctgcgccgtcgagctcggcatcccgac 11550457
Score = 131 bits (66), Expect = 3e-27
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 36 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 95
|||||||||||||| || ||||||||||| || |||||||| ||||||||||||| ||||
Sbjct: 11494873 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 11494814
Query: 96 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 145
||||||||||| |||| ||| |||||||||||| ||||||| ||||||||
Sbjct: 11494813 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 11494764
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 363 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 422
||||||||||||||||||||||||||||||| |||||||| ||||||| | || || |||
Sbjct: 11494549 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 11494490
Query: 423 ctggggatggccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgag 482
|||||| ||| ||||||||||| ||||||||| | |||| | || || |||||||
Sbjct: 11494489 ctggggctggacgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgag 11494430
Query: 483 gacgtgcatagcgcgtcgctcttcgacgagagcac 517
|||||||| |||||||||| ||||||||||||||
Sbjct: 11494429 gacgtgcacggcgcgtcgctgttcgacgagagcac 11494395
Score = 121 bits (61), Expect = 2e-24
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 37 aggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctct 96
|||||||||| || || ||||||||||| || ||||||||||| |||||||||| | |||
Sbjct: 7139018 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 7138959
Query: 97 actacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 145
|||||||||| |||||| |||||||||||||| |||||||||||||||
Sbjct: 7138958 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccc 7138910
Score = 117 bits (59), Expect = 4e-23
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 63 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 122
||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 11482291 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11482350
Query: 123 tgcgccgtcaagctcggcatccc 145
|||||||||||||||||||||||
Sbjct: 11482351 tgcgccgtcaagctcggcatccc 11482373
Score = 113 bits (57), Expect = 6e-22
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 53 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 112
|||||||||||| || |||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 11331656 cgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccat 11331597
Query: 113 ggggctccgctgcgccgtcaagctcggcatccc 145
|| | ||| |||||||||||||||||||||||
Sbjct: 11331596 ggcgttccagtgcgccgtcaagctcggcatccc 11331564
Score = 97.6 bits (49), Expect = 3e-17
Identities = 181/225 (80%)
Strand = Plus / Minus
Query: 53 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 112
|||||||||||| || ||||||||| ||| |||||||| |||||||| | ||||||||||
Sbjct: 11355304 cgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccat 11355245
Query: 113 ggggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggt 172
|| | | | ||||||||||||||||||||||| || || || ||| | ||||||
Sbjct: 11355244 ggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcac 11355185
Query: 173 cacctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcct 232
| |||||||||||||||| | |||| || ||| ||||| | ||||| ||||||||
Sbjct: 11355184 cgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcct 11355125
Query: 233 cggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgc 277
| ||||||| ||||| |||||||| ||| ||||||||||||||
Sbjct: 11355124 ccgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 11355080
Score = 91.7 bits (46), Expect = 2e-15
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 69 caggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgctgcgcc 128
|||||||| ||||||||||||||||||| ||||||||| |||||| ||||| ||||||
Sbjct: 11303032 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11302973
Query: 129 gtcaagctcggcatcccgacggcgatgcacaacctcggcggggtcacctcgctgcccgac 188
||| | ||||||||||| || || || ||| || |||||| | | ||||||||||||||
Sbjct: 11302972 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11302913
Query: 189 ct 190
||
Sbjct: 11302912 ct 11302911
Score = 61.9 bits (31), Expect = 2e-06
Identities = 184/235 (78%)
Strand = Plus / Minus
Query: 54 gagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccatg 113
||||||||||| || |||||||| || |||||||||| ||||| |||| ||||||| ||
Sbjct: 11439601 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctg 11439542
Query: 114 gggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtc 173
| |||| || | | ||||||| |||||||| || || || ||| | |||||| | |
Sbjct: 11439541 agtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgcc 11439482
Query: 174 acctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctc 233
| |||||||||||||||| ||| |||||| ||||| | ||||| |||||||||
Sbjct: 11439481 gcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctc 11439422
Query: 234 ggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccggcggcacca 288
||||||| ||||| ||||||| ||| |||||||||||||||| || |||||
Sbjct: 11439421 cgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacacca 11439367
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 200 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 249
||||||| ||||||| || ||||||||||||||| ||||||| |||||||
Sbjct: 11494709 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 11494660
Score = 52.0 bits (26), Expect = 0.002
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 433 ccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgaggacgtgcata 492
|||||||||||||||||||| | | ||||||||| ||| |||||||||| ||||
Sbjct: 11550178 ccgagtggttcaagaaggacctggcgtcgccggtgccgtcgccgttcgaggacctgcacg 11550119
Query: 493 gcgcgtcgctcttcgacgagagcacc 518
||||| ||| |||||||||||||||
Sbjct: 11550118 gcgcgaggctgttcgacgagagcacc 11550093
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 475 tgttcgaggacgtgcatagcgcgtcgctcttcgacgagagca 516
||||||| ||||||||| ||||| ||| ||||||||||||||
Sbjct: 11439180 tgttcgaagacgtgcatggcgcgacgcccttcgacgagagca 11439139
Score = 46.1 bits (23), Expect = 0.11
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 461 gccggtgccatcggtgttcgaggacgtgcatagcgcgtcgctcttcgacgagagcaccgc 520
||||||||| ||| ||||||||||| ||| ||||| |||| ||||||||| ||||||
Sbjct: 7138573 gccggtgccgtcgccgttcgaggacgcgcacggcgcgccgctgttcgacgaggccaccgc 7138514
Query: 521 ggc 523
|||
Sbjct: 7138513 ggc 7138511
Score = 42.1 bits (21), Expect = 1.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 cacctcgctgcccgacctggc 193
|||||||||||||||||||||
Sbjct: 15679519 cacctcgctgcccgacctggc 15679539
Score = 42.1 bits (21), Expect = 1.8
Identities = 84/105 (80%)
Strand = Plus / Minus
Query: 175 cctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcg 234
|||||||||||||||| | |||| |||||| ||||| | ||||| || ||||||
Sbjct: 11331534 cctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctcc 11331475
Query: 235 gccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccg 279
||||||| ||||| ||||||| ||| ||||||||||||||||
Sbjct: 11331474 gccgcctcatgcggctgctggtccactcgggcgtcttcgccgccg 11331430
>gb|DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 153 bits (77), Expect = 7e-34
Identities = 95/101 (94%)
Strand = Plus / Minus
Query: 48 gatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacg 107
|||||||||||| |||| || |||||||||||||||||||||| ||||||||||||||||
Sbjct: 11629746 gatgccgagctgatgcaagcacaggccgacctgtggcgccacagcctctactacctcacg 11629687
Query: 108 tccatggggctccgctgcgccgtcaagctcggcatcccgac 148
|||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 11629686 tccatgggcctccgctgcgccgtcgagctcggcatcccgac 11629646
Score = 131 bits (66), Expect = 3e-27
Identities = 99/110 (90%)
Strand = Plus / Minus
Query: 36 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 95
|||||||||||||| || ||||||||||| || |||||||| ||||||||||||| ||||
Sbjct: 11574062 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 11574003
Query: 96 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 145
||||||||||| |||| ||| |||||||||||| ||||||| ||||||||
Sbjct: 11574002 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 11573953
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 363 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 422
||||||||||||||||||||||||||||||| |||||||| ||||||| | || || |||
Sbjct: 11573738 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 11573679
Query: 423 ctggggatggccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgag 482
|||||| ||| ||||||||||| ||||||||| | |||| | || || |||||||
Sbjct: 11573678 ctggggctggacgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgag 11573619
Query: 483 gacgtgcatagcgcgtcgctcttcgacgagagcac 517
|||||||| |||||||||| ||||||||||||||
Sbjct: 11573618 gacgtgcacggcgcgtcgctgttcgacgagagcac 11573584
Score = 121 bits (61), Expect = 2e-24
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 37 aggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctct 96
|||||||||| || || ||||||||||| || ||||||||||| |||||||||| | |||
Sbjct: 7204989 aggttcccaccgacgctgagctgctgcaagcacaggccgacctatggcgccacagcttct 7204930
Query: 97 actacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 145
|||||||||| |||||| |||||||||||||| |||||||||||||||
Sbjct: 7204929 cctacctcacggccatggcgctccgctgcgccgccaagctcggcatccc 7204881
Score = 117 bits (59), Expect = 4e-23
Identities = 77/83 (92%)
Strand = Plus / Plus
Query: 63 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 122
||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 11561480 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 11561539
Query: 123 tgcgccgtcaagctcggcatccc 145
|||||||||||||||||||||||
Sbjct: 11561540 tgcgccgtcaagctcggcatccc 11561562
Score = 113 bits (57), Expect = 6e-22
Identities = 84/93 (90%)
Strand = Plus / Minus
Query: 53 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 112
|||||||||||| || |||||||||||||||||||||| |||||||| | ||||||||||
Sbjct: 11410845 cgagctgctgcacgcgcaggccgacctgtggcgccacagcctctacttcgtcacgtccat 11410786
Query: 113 ggggctccgctgcgccgtcaagctcggcatccc 145
|| | ||| |||||||||||||||||||||||
Sbjct: 11410785 ggcgttccagtgcgccgtcaagctcggcatccc 11410753
Score = 97.6 bits (49), Expect = 3e-17
Identities = 181/225 (80%)
Strand = Plus / Minus
Query: 53 cgagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccat 112
|||||||||||| || ||||||||| ||| |||||||| |||||||| | ||||||||||
Sbjct: 11434493 cgagctgctgcacgcgcaggccgacatgttgcgccacagcctctacttcgtcacgtccat 11434434
Query: 113 ggggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggt 172
|| | | | ||||||||||||||||||||||| || || || ||| | ||||||
Sbjct: 11434433 ggcgtttcagtgcgccgtcaagctcggcatccccaccgccatccaccgcgccggcggcac 11434374
Query: 173 cacctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcct 232
| |||||||||||||||| | |||| || ||| ||||| | ||||| ||||||||
Sbjct: 11434373 cgcctcgctgcccgaccttgtcgccgccctctccctcccgcccgccaagctcccgttcct 11434314
Query: 233 cggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgc 277
| ||||||| ||||| |||||||| ||| ||||||||||||||
Sbjct: 11434313 ccgccgcctcatgcggctgctggtcaactcgggcgtcttcgccgc 11434269
Score = 91.7 bits (46), Expect = 2e-15
Identities = 103/122 (84%)
Strand = Plus / Minus
Query: 69 caggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgctgcgcc 128
|||||||| ||||||||||||||||||| ||||||||| |||||| ||||| ||||||
Sbjct: 11382221 caggccgagctgtggcgccacaccctctcctacctcacctccatgactctccggtgcgcc 11382162
Query: 129 gtcaagctcggcatcccgacggcgatgcacaacctcggcggggtcacctcgctgcccgac 188
||| | ||||||||||| || || || ||| || |||||| | | ||||||||||||||
Sbjct: 11382161 gtccacctcggcatccccaccgccatccaccgccacggcggcgccgcctcgctgcccgac 11382102
Query: 189 ct 190
||
Sbjct: 11382101 ct 11382100
Score = 61.9 bits (31), Expect = 2e-06
Identities = 184/235 (78%)
Strand = Plus / Minus
Query: 54 gagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccatg 113
||||||||||| || |||||||| || |||||||||| ||||| |||| ||||||| ||
Sbjct: 11518790 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctg 11518731
Query: 114 gggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtc 173
| |||| || | | ||||||| |||||||| || || || ||| | |||||| | |
Sbjct: 11518730 agtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgcc 11518671
Query: 174 acctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctc 233
| |||||||||||||||| ||| |||||| ||||| | ||||| |||||||||
Sbjct: 11518670 gcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctc 11518611
Query: 234 ggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccggcggcacca 288
||||||| ||||| ||||||| ||| |||||||||||||||| || |||||
Sbjct: 11518610 cgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacacca 11518556
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 200 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 249
||||||| ||||||| || ||||||||||||||| ||||||| |||||||
Sbjct: 11573898 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 11573849
Score = 52.0 bits (26), Expect = 0.002
Identities = 71/86 (82%)
Strand = Plus / Minus
Query: 433 ccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgaggacgtgcata 492
|||||||||||||||||||| | | ||||||||| ||| |||||||||| ||||
Sbjct: 11629367 ccgagtggttcaagaaggacctggcgtcgccggtgccgtcgccgttcgaggacctgcacg 11629308
Query: 493 gcgcgtcgctcttcgacgagagcacc 518
||||| ||| |||||||||||||||
Sbjct: 11629307 gcgcgaggctgttcgacgagagcacc 11629282
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 475 tgttcgaggacgtgcatagcgcgtcgctcttcgacgagagca 516
||||||| ||||||||| ||||| ||| ||||||||||||||
Sbjct: 11518369 tgttcgaagacgtgcatggcgcgacgcccttcgacgagagca 11518328
Score = 46.1 bits (23), Expect = 0.11
Identities = 53/63 (84%)
Strand = Plus / Minus
Query: 461 gccggtgccatcggtgttcgaggacgtgcatagcgcgtcgctcttcgacgagagcaccgc 520
||||||||| ||| ||||||||||| ||| ||||| |||| ||||||||| ||||||
Sbjct: 7204544 gccggtgccgtcgccgttcgaggacgcgcacggcgcgccgctgttcgacgaggccaccgc 7204485
Query: 521 ggc 523
|||
Sbjct: 7204484 ggc 7204482
Score = 42.1 bits (21), Expect = 1.8
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 173 cacctcgctgcccgacctggc 193
|||||||||||||||||||||
Sbjct: 15766896 cacctcgctgcccgacctggc 15766916
Score = 42.1 bits (21), Expect = 1.8
Identities = 84/105 (80%)
Strand = Plus / Minus
Query: 175 cctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctcg 234
|||||||||||||||| | |||| |||||| ||||| | ||||| || ||||||
Sbjct: 11410723 cctcgctgcccgaccttgtcgccgccctgtccctcccgcccgccaagctcccattcctcc 11410664
Query: 235 gccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccg 279
||||||| ||||| ||||||| ||| ||||||||||||||||
Sbjct: 11410663 gccgcctcatgcggctgctggtccactcgggcgtcttcgccgccg 11410619
>gb|AC135793.4 | Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
Length = 128418
Score = 131 bits (66), Expect = 3e-27
Identities = 99/110 (90%)
Strand = Plus / Plus
Query: 36 gaggttcccactgatgccgagctgctgcaggctcaggccgacctgtggcgccacaccctc 95
|||||||||||||| || ||||||||||| || |||||||| ||||||||||||| ||||
Sbjct: 4664 gaggttcccactgacgctgagctgctgcaagcgcaggccgatctgtggcgccacagcctc 4723
Query: 96 tactacctcacgtccatggggctccgctgcgccgtcaagctcggcatccc 145
||||||||||| |||| ||| |||||||||||| ||||||| ||||||||
Sbjct: 4724 tactacctcacctccacgggactccgctgcgccatcaagctgggcatccc 4773
Score = 125 bits (63), Expect = 2e-25
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 363 caccacagccagacgtccttcgtgctcgccgggacgtcgccgcactacatggaagccgcg 422
||||||||||||||||||||||||||||||| |||||||| ||||||| | || || |||
Sbjct: 4988 caccacagccagacgtccttcgtgctcgccgcgacgtcgcggcactacctcgaggcggcg 5047
Query: 423 ctggggatggccgagtggttcaagaaggacgtcaccgggccggtgccatcggtgttcgag 482
|||||| ||| ||||||||||| ||||||||| | |||| | || || |||||||
Sbjct: 5048 ctggggctggacgagtggttcaggaaggacgtggcgccgccgctcccgtccccgttcgag 5107
Query: 483 gacgtgcatagcgcgtcgctcttcgacgagagcac 517
|||||||| |||||||||| ||||||||||||||
Sbjct: 5108 gacgtgcacggcgcgtcgctgttcgacgagagcac 5142
Score = 117 bits (59), Expect = 4e-23
Identities = 77/83 (92%)
Strand = Plus / Minus
Query: 63 caggctcaggccgacctgtggcgccacaccctctactacctcacgtccatggggctccgc 122
||||| |||||| ||||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 17246 caggcgcaggccaacctgtggcgccacagcctctactacctcacctccatggcgctccgg 17187
Query: 123 tgcgccgtcaagctcggcatccc 145
|||||||||||||||||||||||
Sbjct: 17186 tgcgccgtcaagctcggcatccc 17164
Score = 61.9 bits (31), Expect = 2e-06
Identities = 184/235 (78%)
Strand = Plus / Plus
Query: 54 gagctgctgcaggctcaggccgacctgtggcgccacaccctctactacctcacgtccatg 113
||||||||||| || |||||||| || |||||||||| ||||| |||| ||||||| ||
Sbjct: 59936 gagctgctgcaagcacaggccgatctatggcgccacagcctctgctacatcacgtctctg 59995
Query: 114 gggctccgctgcgccgtcaagctcggcatcccgacggcgatgcacaacctcggcggggtc 173
| |||| || | | ||||||| |||||||| || || || ||| | |||||| | |
Sbjct: 59996 agtctccaatgtgtcatcaagcttggcatccccaccgccatccaccgcgccggcggcgcc 60055
Query: 174 acctcgctgcccgacctggcggccgtgctgtccatcccggcaagcaagcagccgttcctc 233
| |||||||||||||||| ||| |||||| ||||| | ||||| |||||||||
Sbjct: 60056 gcgtcgctgcccgacctggttaccgctctgtccctcccgccgtccaagctaccgttcctc 60115
Query: 234 ggccgcctgatgcgcgcgctggtcacctcaggcgtcttcgccgccggcggcacca 288
||||||| ||||| ||||||| ||| |||||||||||||||| || |||||
Sbjct: 60116 cgccgcctcatgcggctgctggtccactccggcgtcttcgccgccgacgacacca 60170
Score = 60.0 bits (30), Expect = 8e-06
Identities = 45/50 (90%)
Strand = Plus / Plus
Query: 200 gctgtccatcccggcaagcaagcagccgttcctcggccgcctgatgcgcg 249
||||||| ||||||| || ||||||||||||||| ||||||| |||||||
Sbjct: 4828 gctgtccctcccggcgagtaagcagccgttcctccgccgcctcatgcgcg 4877
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 475 tgttcgaggacgtgcatagcgcgtcgctcttcgacgagagca 516
||||||| ||||||||| ||||| ||| ||||||||||||||
Sbjct: 60357 tgttcgaagacgtgcatggcgcgacgcccttcgacgagagca 60398
>gb|AE016958.1 | Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
Length = 4829781
Score = 40.1 bits (20), Expect = 7.1
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 221 gcagccgttcctcggccgcc 240
||||||||||||||||||||
Sbjct: 3087139 gcagccgttcctcggccgcc 3087158
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,873,104
Number of Sequences: 3902068
Number of extensions: 2873104
Number of successful extensions: 59718
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58489
Number of HSP's gapped (non-prelim): 1220
length of query: 523
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 500
effective length of database: 17,143,297,704
effective search space: 8571648852000
effective search space used: 8571648852000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)