ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd14j07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late ... 30 3.3
2KCNA2_XENLA (P22739) Potassium voltage-gated channel subfamily A... 28 9.7

>ADEN_ADEB4 (O71150) Adenain (EC 3.4.22.39) (Endoprotease) (Late L3 23 kDa|
           protein)
          Length = 201

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = -2

Query: 302 RNLNDASPAQRPCDPSSYHESSD 234
           ++LN ASP+  P DPSS H++ D
Sbjct: 147 QSLNGASPSLTPSDPSSLHKNQD 169



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>KCNA2_XENLA (P22739) Potassium voltage-gated channel subfamily A member 2|
           (Voltage-gated potassium channel subunit Kv1.2) (xSHA2)
          Length = 499

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/48 (35%), Positives = 22/48 (45%)
 Frame = -2

Query: 149 NYYGYPSSTYHQTNYN*FNEPFAVSQFKLVHTCTCMA*XFETSIXLLA 6
           NYY YP+ST      N F +PF +     V T   +   FE  +  LA
Sbjct: 201 NYYSYPNSTVRFQKSNTFTDPFFI-----VETLCIIWFSFEFLVRFLA 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,320,963
Number of Sequences: 219361
Number of extensions: 1268380
Number of successful extensions: 2524
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2524
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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