| Clone Name | basd14j01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507291.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0016N23.125 mRNA Length = 1424 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 ccggcgtgacctccgccgc 88 ||||||||||||||||||| Sbjct: 83 ccggcgtgacctccgccgc 101
>ref|XM_483295.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1411 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 ccggcgtgacctccgccgc 88 ||||||||||||||||||| Sbjct: 69 ccggcgtgacctccgccgc 87
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 ccggcgtgacctccgccgc 88 ||||||||||||||||||| Sbjct: 25327110 ccggcgtgacctccgccgc 25327092
>dbj|AP006049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0016N23 Length = 147336 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 70 ccggcgtgacctccgccgc 88 ||||||||||||||||||| Sbjct: 102295 ccggcgtgacctccgccgc 102277
>dbj|AK106031.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-D03, full insert sequence Length = 1411 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 ccggcgtgacctccgccgc 88 ||||||||||||||||||| Sbjct: 69 ccggcgtgacctccgccgc 87
>dbj|AK072063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110D22, full insert sequence Length = 1424 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 70 ccggcgtgacctccgccgc 88 ||||||||||||||||||| Sbjct: 83 ccggcgtgacctccgccgc 101
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 6.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 70 ccggcgtgacctccgccgcggcg 92 |||||| |||||||||||||||| Sbjct: 4466873 ccggcgagacctccgccgcggcg 4466851
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 38.2 bits (19), Expect = 6.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 72 ggcgtgacctccgccgcgg 90 ||||||||||||||||||| Sbjct: 2739489 ggcgtgacctccgccgcgg 2739471 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 347,318 Number of Sequences: 3902068 Number of extensions: 347318 Number of successful extensions: 17480 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 17376 Number of HSP's gapped (non-prelim): 104 length of query: 135 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 114 effective length of database: 17,151,101,840 effective search space: 1955225609760 effective search space used: 1955225609760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)