ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd14i02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF302906.1|AF302906 Oryza sativa citrate synthase mRNA, complete cds Length = 1523 Score = 680 bits (343), Expect = 0.0 Identities = 508/563 (90%) Strand = Plus / Plus Query: 36 tagcagcgtgctccggccatggcgttcttccggggcctggccgcggtctcgagactgcga 95 |||| ||||||||||||||||||||||||| |||||||| ||||||| ||||| || ||| Sbjct: 87 tagccgcgtgctccggccatggcgttcttcaggggcctgaccgcggtgtcgaggcttcga 146 Query: 96 tcccgtatgggacaggatgccaccacgcttggtggtgtgagatggctgcagatgcagagc 155 ||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 147 tcccgcgtggcacaggaggccaccacgcttggtggtgtgcgatggctgcagatgcagagc 206 Query: 156 gcttccgatctcgatcttaggtcccagctgcaggaaatgattccggagcaacaggatcgc 215 || || ||||| ||||| | |||||||||||||||| ||||||| || |||||||| ||| Sbjct: 207 gcatctgatcttgatctcaagtcccagctgcaggaattgattcctgaacaacaggaccgc 266 Query: 216 ttgaagaaacttaagtcagagcatggaaaggtccagcttggaaacataactgtggacatg 275 || ||||||||||| || ||||||||||||||||| |||||||| ||||| || || ||| Sbjct: 267 ttaaagaaacttaaatcggagcatggaaaggtccaacttggaaatataacagtcgatatg 326 Query: 276 gtccttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgacccg 335 ||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||| Sbjct: 327 gtccttggtgggatgagagggatgactggaatgctttgggaaacatcattgcttgacccg 386 Query: 336 gaggagggtattcgatttagaggtctctctattccagagtgccagaaagtactgccggct 395 || ||||||||||| ||||| |||||||| |||||||||||||||||||| |||||| | Sbjct: 387 gatgagggtattcgttttaggggtctctcgattccagagtgccagaaagtgctgccgaca 446 Query: 396 gcagttaaagatggagaacctttacctgagggtctcctttggcttcttttgaccggaaag 455 |||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 447 gcagttaaagatggggagcctttgcctgagggtctactttggcttcttttgaccggaaag 506 Query: 456 gtgccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactgtt 515 ||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||| |||| Sbjct: 507 gtgccaaccaaagagcaagttgatgctctatcaaaggaattggctagtcgttcgagtgtt 566 Query: 516 ccaggttatgtctataaggctatagatgctctccctgtaactgctcatccaatgacacag 575 |||||| |||| |||||||| || |||||||||||||||||||||||||| ||||| ||| Sbjct: 567 ccaggtcatgtgtataaggcaatcgatgctctccctgtaactgctcatccgatgacccag 626 Query: 576 tttaccacagtagtgatggcact 598 |||||||||| |||||||||||| Sbjct: 627 tttaccacaggagtgatggcact 649
>dbj|AK072950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146L07, full insert sequence Length = 2099 Score = 654 bits (330), Expect = 0.0 Identities = 495/550 (90%) Strand = Plus / Plus Query: 49 cggccatggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatgggac 108 |||| ||||||||||||||||||||| ||||||| ||||| | |||||||| |||| || Sbjct: 313 cggcgatggcgttcttccggggcctgaccgcggtttcgaggattcgatcccgcatggcac 372 Query: 109 aggatgccaccacgcttggtggtgtgagatggctgcagatgcagagcgcttccgatctcg 168 |||| ||||||||||||||||||||||||||||||||||||||||| | || ||||| | Sbjct: 373 aggaggccaccacgcttggtggtgtgagatggctgcagatgcagagtccatctgatcttg 432 Query: 169 atcttaggtcccagctgcaggaaatgattccggagcaacaggatcgcttgaagaaactta 228 |||||| |||||||||||||||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 433 atcttaagtcccagctgcaggaattgattcccgagcaacaggatcgcttaaagaaactta 492 Query: 229 agtcagagcatggaaaggtccagcttggaaacataactgtggacatggtccttggtggga 288 | ||||| ||||| |||||||||||||||||||||||||| || ||||||||||| |||| Sbjct: 493 aatcagaacatgggaaggtccagcttggaaacataactgttgatatggtccttggcggga 552 Query: 289 tgagagggatgactggaatgctctgggaaacatctttacttgacccggaggagggtattc 348 ||||||| |||| ||||||||| ||||||||||| || |||||||||||||||||||||| Sbjct: 553 tgagaggaatgattggaatgctttgggaaacatcattgcttgacccggaggagggtattc 612 Query: 349 gatttagaggtctctctattccagagtgccagaaagtactgccggctgcagttaaagatg 408 | || || |||||||| |||||||||||||||||||| ||||| | ||| |||||| || Sbjct: 613 gtttcaggggtctctcgattccagagtgccagaaagtgctgccaacagcaattaaaggtg 672 Query: 409 gagaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaagg 468 |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 673 gagaacctttgccggagggtctcctttggcttcttttgactggaaaggtgccaaccaaag 732 Query: 469 agcaagttgatgctctatcaaaggagttgcttagccgttcgactgttccaggttatgtct 528 ||||||| ||||||||||||||||| ||| ||| |||||||| ||||||||| |||| | Sbjct: 733 agcaagtcgatgctctatcaaaggaattggttacccgttcgagtgttccaggccatgtgt 792 Query: 529 ataaggctatagatgctctccctgtaactgctcatccaatgacacagtttaccacagtag 588 ||||||| || |||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 793 ataaggcaattgatgctctccctgtaactgctcatccaatgacacagtttaccacagggg 852 Query: 589 tgatggcact 598 |||||||||| Sbjct: 853 tgatggcact 862
>ref|XM_464443.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1419 Score = 636 bits (321), Expect = e-179 Identities = 489/545 (89%) Strand = Plus / Plus Query: 54 atggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatgggacaggat 113 |||||||||||| |||||||| ||||||| ||||| || |||||||| ||| |||||| Sbjct: 1 atggcgttcttcaggggcctgaccgcggtgtcgaggcttcgatcccgcgtggcacaggag 60 Query: 114 gccaccacgcttggtggtgtgagatggctgcagatgcagagcgcttccgatctcgatctt 173 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||| Sbjct: 61 gccaccacgcttggtggtgtgcgatggctgcagatgcagagcgcatctgatcttgatctc 120 Query: 174 aggtcccagctgcaggaaatgattccggagcaacaggatcgcttgaagaaacttaagtca 233 | |||||||||||||||| ||||||| || |||||||| ||||| ||||||||||| || Sbjct: 121 aagtcccagctgcaggaattgattcctgaacaacaggaccgcttaaagaaacttaaatcg 180 Query: 234 gagcatggaaaggtccagcttggaaacataactgtggacatggtccttggtgggatgaga 293 ||||||||||||||||| |||||||| ||||| || || ||||||||||||||||||||| Sbjct: 181 gagcatggaaaggtccaacttggaaatataacagtcgatatggtccttggtgggatgaga 240 Query: 294 gggatgactggaatgctctgggaaacatctttacttgacccggaggagggtattcgattt 353 ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 241 gggatgactggaatgctttgggaaacatcattgcttgacccggatgagggtattcgtttt 300 Query: 354 agaggtctctctattccagagtgccagaaagtactgccggctgcagttaaagatggagaa 413 || |||||||| |||||||||||||||||||| |||||| | |||||||||||||| || Sbjct: 301 aggggtctctcgattccagagtgccagaaagtgctgccgacagcagttaaagatggggag 360 Query: 414 cctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaa 473 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 361 cctttgcctgagggtctactttggcttcttttgaccggaaaggtgccaaccaaagagcaa 420 Query: 474 gttgatgctctatcaaaggagttgcttagccgttcgactgttccaggttatgtctataag 533 |||||||||||||||||||| ||| ||| ||||||| |||||||||| |||| ||| || Sbjct: 421 gttgatgctctatcaaaggaattggctagtcgttcgagtgttccaggtcatgtgtatgag 480 Query: 534 gctatagatgctctccctgtaactgctcatccaatgacacagtttaccacagtagtgatg 593 || || |||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||| Sbjct: 481 gcaatcgatgctcttcctgtaactgctcatccgatgacccagtttaccacaggagtgatg 540 Query: 594 gcact 598 ||||| Sbjct: 541 gcact 545
>gb|AY753182.1| Oryza sativa (japonica cultivar-group) citrate synthase mRNA, complete cds Length = 1477 Score = 628 bits (317), Expect = e-177 Identities = 488/545 (89%) Strand = Plus / Plus Query: 54 atggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatgggacaggat 113 |||||||||||| |||||||| ||||||| ||||| || |||||||| ||| |||||| Sbjct: 46 atggcgttcttcaggggcctgaccgcggtgtcgaggcttcgatcccgcgtggcacaggag 105 Query: 114 gccaccacgcttggtggtgtgagatggctgcagatgcagagcgcttccgatctcgatctt 173 ||||||||||||||||||||| |||||||||||||||||||||| || ||||| ||||| Sbjct: 106 gccaccacgcttggtggtgtgcgatggctgcagatgcagagcgcatctgatcttgatctc 165 Query: 174 aggtcccagctgcaggaaatgattccggagcaacaggatcgcttgaagaaacttaagtca 233 | |||||||||||||||| ||||||| || |||||||| ||||| ||||||||||| || Sbjct: 166 aagtcccagctgcaggaattgattcctgaacaacaggaccgcttaaagaaacttaaatcg 225 Query: 234 gagcatggaaaggtccagcttggaaacataactgtggacatggtccttggtgggatgaga 293 ||||||||||||||||| |||||||| ||||| || || ||||||||||||||||||||| Sbjct: 226 gagcatggaaaggtccaacttggaaatataacagtcgatatggtccttggtgggatgaga 285 Query: 294 gggatgactggaatgctctgggaaacatctttacttgacccggaggagggtattcgattt 353 ||||||||||||||||| ||||||||||| || ||||||||||| ||||||||||| ||| Sbjct: 286 gggatgactggaatgctttgggaaacatcattgcttgacccggatgagggtattcgtttt 345 Query: 354 agaggtctctctattccagagtgccagaaagtactgccggctgcagttaaagatggagaa 413 || |||||||| ||||||||| |||||||||| |||||| | |||||||||||||| || Sbjct: 346 aggggtctctcgattccagagcgccagaaagtgctgccgacagcagttaaagatggggag 405 Query: 414 cctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaa 473 ||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 406 cctttgcctgagggtctactttggcttcttttgaccggaaaggtgccaaccaaagagcaa 465 Query: 474 gttgatgctctatcaaaggagttgcttagccgttcgactgttccaggttatgtctataag 533 |||||||||||||||||||| ||| ||| ||||||| |||||||||| |||| ||| || Sbjct: 466 gttgatgctctatcaaaggaattggctagtcgttcgagtgttccaggtcatgtgtatgag 525 Query: 534 gctatagatgctctccctgtaactgctcatccaatgacacagtttaccacagtagtgatg 593 || || |||||||| ||||||||||||||||| ||||| ||||||||||||| ||||||| Sbjct: 526 gcaatcgatgctcttcctgtaactgctcatccgatgacccagtttaccacaggagtgatg 585 Query: 594 gcact 598 ||||| Sbjct: 586 gcact 590
>gb|AY110422.1| Zea mays CL5118_1 mRNA sequence Length = 639 Score = 569 bits (287), Expect = e-159 Identities = 476/539 (88%) Strand = Plus / Plus Query: 45 gctccggccatggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatg 104 |||||||| || ||||||||||||||||| ||||||||||||||||||||||||| ||| Sbjct: 51 gctccggcaatagcgttcttccggggcctcaccgcggtctcgagactgcgatcccgcatg 110 Query: 105 ggacaggatgccaccacgcttggtggtgtgagatggctgcagatgcagagcgcttccgat 164 | ||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 111 gcgcaggaggccaccacgctgggtggtgtgagatggctgcagatgcagagcgcgtccgat 170 Query: 165 ctcgatcttaggtcccagctgcaggaaatgattccggagcaacaggatcgcttgaagaaa 224 |||||||||| ||||||||||| |||| |||||||||| || ||||| ||| | ||||| Sbjct: 171 ctcgatcttaagtcccagctgcgggaactgattccggaacagcaggaccgcctaaagaag 230 Query: 225 cttaagtcagagcatggaaaggtccagcttggaaacataactgtggacatggtccttggt 284 ||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 231 cttaaatcagagcatgggaaggttcagcttggaaacataactgtggatatggtccttggt 290 Query: 285 gggatgagagggatgactggaatgctctgggaaacatctttacttgacccggaggagggt 344 || ||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||| Sbjct: 291 ggaatgagagggatgattggaatgctttgggaaacatccctacttgacccagaggagggt 350 Query: 345 attcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcagttaaa 404 ||||| ||||| |||||||| ||||||||||||| ||||| ||||| | |||||| | Sbjct: 351 attcgttttaggggtctctcgattccagagtgccgaaaagtgctgccaacagcagttgag 410 Query: 405 gatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaacc 464 | ||| |||||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 411 ggtggtgaacctttgcctgagggtctcctttggcttcttttgacagggaaggtcccaacc 470 Query: 465 aaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactgttccaggttat 524 || |||||||||||||| |||||||| || |||||| || || ||||| |||| | || Sbjct: 471 aaagagcaagttgatgcactatcaaaagaattgcttgcgcgctcaactgtcccagctcat 530 Query: 525 gtctataaggctatagatgctctccctgtaactgctcatccaatgacacagtttaccac 583 ||||||||||| |||||||||||||| |||||||| ||||| |||||||| |||||||| Sbjct: 531 gtctataaggcaatagatgctctcccagtaactgcacatcctatgacacaatttaccac 589
>gb|AY104057.1| Zea mays PCO125766 mRNA sequence Length = 1481 Score = 204 bits (103), Expect = 2e-49 Identities = 214/251 (85%) Strand = Plus / Plus Query: 345 attcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcagttaaa 404 ||||| ||||| || ||||| |||||||| ||||| ||||| ||||| | |||||||| Sbjct: 7 attcgttttaggggcctctcaattccagaatgccaaaaagtgctgccaacagcagttaag 66 Query: 405 gatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaacc 464 | || |||||||| ||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 67 ggcggtgaacctttgcctgagggtctcctttggcttcttttgacggggaaggtcccaacc 126 Query: 465 aaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactgttccaggttat 524 || |||||||||||||| ||||||||||| |||||| || || |||||||||| | || Sbjct: 127 aaagagcaagttgatgcactatcaaaggaattgcttgcgcgctcaactgttccagctcat 186 Query: 525 gtctataaggctatagatgctctccctgtaactgctcatccaatgacacagtttaccaca 584 ||||||||| | |||||||||||||| ||| ||| ||||| |||||||||||||||||| Sbjct: 187 gtctataagacaatagatgctctcccagtagatgcacatcctatgacacagtttaccaca 246 Query: 585 gtagtgatggc 595 | ||| ||||| Sbjct: 247 ggagtaatggc 257
>ref|NM_129998.2| Arabidopsis thaliana ATCS; citrate (SI)-synthase AT2G44350 (ATCS) transcript variant AT2G44350.1 mRNA, complete cds Length = 2112 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 214 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 273 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 274 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 333 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 334 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 393 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 394 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 453 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 454 tgccagaaagta 465 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 490 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 549 Query: 471 caagttga 478 |||||||| Sbjct: 550 caagttga 557
>ref|NM_180084.1| Arabidopsis thaliana ATCS; citrate (SI)-synthase AT2G44350 (ATCS) transcript variant AT2G44350.2 mRNA, complete cds Length = 2115 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 217 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 276 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 277 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 336 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 337 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 396 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 397 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 456 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 457 tgccagaaagta 468 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 493 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 552 Query: 471 caagttga 478 |||||||| Sbjct: 553 caagttga 560
>gb|BT006613.1| Arabidopsis thaliana At2g44350 mRNA, complete cds Length = 1422 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 82 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 141 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 142 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 201 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 202 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 261 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 262 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 321 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 322 tgccagaaagta 333 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 358 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 417 Query: 471 caagttga 478 |||||||| Sbjct: 418 caagttga 425
>gb|AF387018.1|AF387018 Arabidopsis thaliana citrate synthase (At2g44350; F4I1.16) mRNA, complete cds Length = 1757 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 216 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 275 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 276 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 335 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 336 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 395 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 396 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 455 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 456 tgccagaaagta 467 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 492 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 551 Query: 471 caagttga 478 |||||||| Sbjct: 552 caagttga 559
>emb|BX819934.1|CNS0A8H8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1675 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 169 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 228 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 229 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 288 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 289 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 348 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 349 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 408 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 409 tgccagaaagta 420
>emb|BX819782.1|CNS0A8I6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS26ZH09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1714 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 169 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 228 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 229 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 288 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 289 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 348 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 349 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 408 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 409 tgccagaaagta 420 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 445 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 504 Query: 471 caagttga 478 |||||||| Sbjct: 505 caagttga 512
>emb|BX819832.1|CNS0A7W8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS34ZA05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1675 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 170 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 229 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 230 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 289 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 290 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 349 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 350 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 409 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 410 tgccagaaagta 421 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 446 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 505 Query: 471 caagttga 478 |||||||| Sbjct: 506 caagttga 513
>gb|AY085647.1| Arabidopsis thaliana clone 16528 mRNA, complete sequence Length = 1764 Score = 159 bits (80), Expect = 1e-35 Identities = 209/252 (82%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 193 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 252 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || ||||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 253 attccggaacagcaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 312 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 313 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 372 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattccagag 374 ||||| || || ||||||||||| ||||||||||| ||||| || | || ||||| ||| Sbjct: 373 gaaacctcattgcttgacccggaagagggtattcgctttaggggattgtcgattcctgag 432 Query: 375 tgccagaaagta 386 |||||||||||| Sbjct: 433 tgccagaaagta 444 Score = 40.1 bits (20), Expect = 8.2 Identities = 56/68 (82%) Strand = Plus / Plus Query: 411 gaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggag 470 ||||| ||||| |||||||| | |||||||| || || |||||||| || | ||| ||| Sbjct: 469 gaaccattaccggagggtcttttgtggcttctcttaactggaaaggtacctagcaaagag 528 Query: 471 caagttga 478 |||||||| Sbjct: 529 caagttga 536
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 340 agggtattcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcag 399 |||||||||| ||||| |||||||| |||||||||||||||||||| |||||| | |||| Sbjct: 5247068 agggtattcgttttaggggtctctcgattccagagtgccagaaagtgctgccgacagcag 5247009 Query: 400 ttaaagatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 |||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 5247008 ttaaagatggggagcctttgcctgagggtctactttggcttcttttgaccggaaaggt 5246951 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 275 ggtccttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgaccc 334 |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 5247624 ggtccttggtgggatgagagggatgactggaatgctttgggaaacatcattgcttgaccc 5247565 Query: 335 ggaggagg 342 ||| |||| Sbjct: 5247564 ggatgagg 5247557 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 517 caggttatgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagt 576 ||||| |||| ||| |||| || |||||||| ||||||||||||||||| ||||| |||| Sbjct: 5246111 caggtcatgtgtatgaggcaatcgatgctcttcctgtaactgctcatccgatgacccagt 5246052 Query: 577 ttaccacagtagtgatggcact 598 ||||||||| |||||||||||| Sbjct: 5246051 ttaccacaggagtgatggcact 5246030 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 107 acaggatgccaccacgcttggtggtgtgagatggctgcagatgcagagcgcttccgatct 166 |||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 5248650 acaggaggccaccacgcttggtggtgtgcgatggctgcagatgcagagcgcatctgatct 5248591 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 454 aggtgccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactg 513 ||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||| || Sbjct: 5246845 aggtgccaaccaaagagcaagttgatgctctatcaaaggaattggctagtcgttcgagtg 5246786 Query: 514 ttccaggt 521 |||||||| Sbjct: 5246785 ttccaggt 5246778 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 36 tagcagcgtgctccggccatggcgttcttccggggcctggccgcggtctcgagactgcga 95 |||| ||||||||||||||||||||||||| |||||||| ||||||| ||||| || ||| Sbjct: 5248812 tagccgcgtgctccggccatggcgttcttcaggggcctgaccgcggtgtcgaggcttcga 5248753 Query: 96 tcccg 100 ||||| Sbjct: 5248752 tcccg 5248748 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 206 acaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagcttggaaacataac 265 |||||| ||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 5247782 acaggaccgcttaaagaaacttaaatcggagcatggaaaggtccaacttggaaatataac 5247723 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 176 gtcccagctgcaggaaatgattccggagcaacagg 210 |||||||||||||||| ||||||| || ||||||| Sbjct: 5248438 gtcccagctgcaggaattgattcctgaacaacagg 5248404 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/52 (86%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 545 tctccctgtaactgctcatccaatgacacagtttaccacagtagtgatggca 596 ||||||||||||| ||||| | |||||| |||||||||| |||||||||| Sbjct: 34191360 tctccctgtaactactcattcgatgaca--gtttaccacatgagtgatggca 34191311
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 155 bits (78), Expect = 2e-34 Identities = 108/118 (91%) Strand = Plus / Minus Query: 340 agggtattcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcag 399 |||||||||| ||||| |||||||| |||||||||||||||||||| |||||| | |||| Sbjct: 140521 agggtattcgttttaggggtctctcgattccagagtgccagaaagtgctgccgacagcag 140462 Query: 400 ttaaagatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 |||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 140461 ttaaagatggggagcctttgcctgagggtctactttggcttcttttgaccggaaaggt 140404 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 275 ggtccttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgaccc 334 |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||| Sbjct: 141077 ggtccttggtgggatgagagggatgactggaatgctttgggaaacatcattgcttgaccc 141018 Query: 335 ggaggagg 342 ||| |||| Sbjct: 141017 ggatgagg 141010 Score = 91.7 bits (46), Expect = 2e-15 Identities = 73/82 (89%) Strand = Plus / Minus Query: 517 caggttatgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagt 576 ||||| |||| ||| |||| || |||||||| ||||||||||||||||| ||||| |||| Sbjct: 139564 caggtcatgtgtatgaggcaatcgatgctcttcctgtaactgctcatccgatgacccagt 139505 Query: 577 ttaccacagtagtgatggcact 598 ||||||||| |||||||||||| Sbjct: 139504 ttaccacaggagtgatggcact 139483 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Minus Query: 107 acaggatgccaccacgcttggtggtgtgagatggctgcagatgcagagcgcttccgatct 166 |||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 142103 acaggaggccaccacgcttggtggtgtgcgatggctgcagatgcagagcgcatctgatct 142044 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 454 aggtgccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactg 513 ||||||||||||| |||||||||||||||||||||||||| ||| ||| ||||||| || Sbjct: 140298 aggtgccaaccaaagagcaagttgatgctctatcaaaggaattggctagtcgttcgagtg 140239 Query: 514 ttccaggt 521 |||||||| Sbjct: 140238 ttccaggt 140231 Score = 81.8 bits (41), Expect = 2e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 36 tagcagcgtgctccggccatggcgttcttccggggcctggccgcggtctcgagactgcga 95 |||| ||||||||||||||||||||||||| |||||||| ||||||| ||||| || ||| Sbjct: 142265 tagccgcgtgctccggccatggcgttcttcaggggcctgaccgcggtgtcgaggcttcga 142206 Query: 96 tcccg 100 ||||| Sbjct: 142205 tcccg 142201 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 206 acaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagcttggaaacataac 265 |||||| ||||| ||||||||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 141235 acaggaccgcttaaagaaacttaaatcggagcatggaaaggtccaacttggaaatataac 141176 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 176 gtcccagctgcaggaaatgattccggagcaacagg 210 |||||||||||||||| ||||||| || ||||||| Sbjct: 141891 gtcccagctgcaggaattgattcctgaacaacagg 141857
>gb|BT018332.1| Zea mays clone EL01T0402A06.c mRNA sequence Length = 1288 Score = 137 bits (69), Expect = 5e-29 Identities = 111/125 (88%) Strand = Plus / Plus Query: 459 ccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactgttcca 518 |||||||| |||||||||||||||||||||||||| |||||| || || ||||| ||| Sbjct: 10 ccaaccaaagagcaagttgatgctctatcaaaggaattgcttgagcgctcaactgtccca 69 Query: 519 ggttatgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagttt 578 | | ||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||| Sbjct: 70 gctcatgtctataaggcaatagatgctctcccagtaactgcacatcctatgacacagttt 129 Query: 579 accac 583 ||||| Sbjct: 130 accac 134
>gb|AF367444.1| Prunus persica clone Cs1 citrate synthase (cs1) mRNA, complete cds; nuclear gene for mitochondrial product Length = 1873 Score = 137 bits (69), Expect = 5e-29 Identities = 315/397 (79%) Strand = Plus / Plus Query: 187 aggaaatgattccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaagg 246 ||||| ||||||| || |||||||| || |||||||| | ||| |||| ||||||| | Sbjct: 275 aggaattgattccagaacaacaggaacgtctgaagaaaatcaaggcagaatatggaaaag 334 Query: 247 tccagcttggaaacataactgtggacatggtccttggtgggatgagagggatgactggaa 306 | || || || || || ||||| || ||||| ||||| |||||||| |||||||| || Sbjct: 335 ttcaactgggcaatatcactgttgatatggttcttggggggatgagggggatgacagggt 394 Query: 307 tgctctgggaaacatctttacttgacccggaggagggtattcgatttagaggtctctcta 366 |||| |||||||| || ||||||||||| || ||||| ||||| || || ||| | || | Sbjct: 395 tgctgtgggaaacttccttacttgacccagatgaggggattcgtttcaggggtttgtcaa 454 Query: 367 ttccagagtgccagaaagtactgccggctgcagttaaagatggagaacctttacctgagg 426 ||||||| |||||||||||| | || | |||| | ||| |||||||| ||||||| Sbjct: 455 ttccagaatgccagaaagtattaccaggtgcaaagcctggtggggaacctttgcctgagg 514 Query: 427 gtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaagttgatgctctat 486 |||| || ||||| ||||| || |||||||| |||| ||| |||||||||||||| ||| Sbjct: 515 gtcttctgtggctacttttaacaggaaaggtaccaagcaaagagcaagttgatgcattat 574 Query: 487 caaaggagttgcttagccgttcgactgttccaggttatgtctataaggctatagatgctc 546 | |||| ||| |||||| | | ||||||| |||||| |||||||| || ||||||| Sbjct: 575 ckkaggaattgaggagccgtgccgcagttccagattatgtgtataaggccattgatgctc 634 Query: 547 tccctgtaactgctcatccaatgacacagtttaccac 583 | ||| | || || ||||||||||| ||||||||||| Sbjct: 635 tgcctattacagcacatccaatgactcagtttaccac 671
>gb|AY428532.1| Citrus junos mitochondrial citrate synthase precursor mRNA, complete cds; nuclear gene for mitochondrial product Length = 1733 Score = 133 bits (67), Expect = 7e-28 Identities = 205/251 (81%) Strand = Plus / Plus Query: 132 gtgagatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaa 191 ||||||||||| || ||||| ||| |||| ||||| || ||| || ||||| ||||| Sbjct: 110 gtgagatggcttcaaatgcaaagctcttctgatcttgaccttcattctcagctcaaggaa 169 Query: 192 atgattccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccag 251 |||||||| || |||||||| ||| |||||||| | |||||||| | |||||| | |||| Sbjct: 170 atgattccagaacaacaggagcgcctgaagaaagtgaagtcagaacttggaaaagcccag 229 Query: 252 cttggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctc 311 || ||||| || || || |||||||| | || ||||||||||| |||||||| | ||| Sbjct: 230 ctgggaaatattaccgttgacatggtaatcggcgggatgagaggaatgactggcttactc 289 Query: 312 tgggaaacatctttacttgacccggaggagggtattcgatttagaggtctctctattcca 371 |||||||| || ||||||||||| || ||||| ||||| ||| | ||||| |||||||| Sbjct: 290 tgggaaacctcattacttgaccctgatgagggaattcgctttcggggtctgtctattcct 349 Query: 372 gagtgccagaa 382 ||||||||||| Sbjct: 350 gagtgccagaa 360 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 404 agatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 ||||||||||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 382 agatggagaacctttgcctgagggtcttctttggcttcttttaactggaaaggt 435
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 340 agggtattcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcag 399 |||||||||| || || |||||||| |||||||||||||||||||| ||||| | ||| Sbjct: 89473 agggtattcgtttcaggggtctctcgattccagagtgccagaaagtgctgccaacagcaa 89532 Query: 400 ttaaagatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 |||||| |||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 89533 ttaaaggtggagaacctttgccggagggtctcctttggcttcttttgactggaaaggt 89590 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 523 atgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagtttacca 582 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90600 atgtgtataaggcaattgatgctctccctgtaactgctcatccaatgacacagtttacca 90659 Query: 583 cagtagtgatggcact 598 ||| ||||||||||| Sbjct: 90660 caggggtgatggcact 90675 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 206 acaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagcttggaaacataac 265 |||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 88754 acaggatcgcttaaagaaacttaaatcagaacatgggaaggtccagcttggaaacataac 88813 Query: 266 tgtggacatggt 277 ||| || ||||| Sbjct: 88814 tgttgatatggt 88825 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 454 aggtgccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactg 513 ||||||||||||| |||||||| ||||||||||||||||| ||| ||| |||||||| || Sbjct: 89788 aggtgccaaccaaagagcaagtcgatgctctatcaaaggaattggttacccgttcgagtg 89847 Query: 514 ttccaggt 521 |||||||| Sbjct: 89848 ttccaggt 89855 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 275 ggtccttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgaccc 334 ||||||||| ||||||||||| |||| ||||||||| ||||||||||| || |||||||| Sbjct: 88925 ggtccttggcgggatgagaggaatgattggaatgctttgggaaacatcattgcttgaccc 88984 Query: 335 ggaggagg 342 |||||||| Sbjct: 88985 ggaggagg 88992 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 107 acaggatgccaccacgcttggtggtgtgagatggctgcagatgcagag 154 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 87917 acaggaggccaccacgcttggtggtgtgagatggctgcagatgcagag 87964 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 168 gatcttaggtcccagctgcaggaaatgattccggagcaacagg 210 ||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 88155 gatcttaagtcccagctgcaggaattgattcccgagcaacagg 88197 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 49 cggccatggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatgg 105 |||| ||||||||||||||||||||| ||||||| ||||| | |||||||| |||| Sbjct: 87764 cggcgatggcgttcttccggggcctgaccgcggtttcgaggattcgatcccgcatgg 87820
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 340 agggtattcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcag 399 |||||||||| || || |||||||| |||||||||||||||||||| ||||| | ||| Sbjct: 18986275 agggtattcgtttcaggggtctctcgattccagagtgccagaaagtgctgccaacagcaa 18986334 Query: 400 ttaaagatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 |||||| |||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 18986335 ttaaaggtggagaacctttgccggagggtctcctttggcttcttttgactggaaaggt 18986392 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 523 atgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagtttacca 582 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18987402 atgtgtataaggcaattgatgctctccctgtaactgctcatccaatgacacagtttacca 18987461 Query: 583 cagtagtgatggcact 598 ||| ||||||||||| Sbjct: 18987462 caggggtgatggcact 18987477 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 206 acaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagcttggaaacataac 265 |||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 18985556 acaggatcgcttaaagaaacttaaatcagaacatgggaaggtccagcttggaaacataac 18985615 Query: 266 tgtggacatggt 277 ||| || ||||| Sbjct: 18985616 tgttgatatggt 18985627 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 454 aggtgccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactg 513 ||||||||||||| |||||||| ||||||||||||||||| ||| ||| |||||||| || Sbjct: 18986590 aggtgccaaccaaagagcaagtcgatgctctatcaaaggaattggttacccgttcgagtg 18986649 Query: 514 ttccaggt 521 |||||||| Sbjct: 18986650 ttccaggt 18986657 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 275 ggtccttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgaccc 334 ||||||||| ||||||||||| |||| ||||||||| ||||||||||| || |||||||| Sbjct: 18985727 ggtccttggcgggatgagaggaatgattggaatgctttgggaaacatcattgcttgaccc 18985786 Query: 335 ggaggagg 342 |||||||| Sbjct: 18985787 ggaggagg 18985794 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 107 acaggatgccaccacgcttggtggtgtgagatggctgcagatgcagag 154 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 18984719 acaggaggccaccacgcttggtggtgtgagatggctgcagatgcagag 18984766 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 168 gatcttaggtcccagctgcaggaaatgattccggagcaacagg 210 ||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 18984957 gatcttaagtcccagctgcaggaattgattcccgagcaacagg 18984999 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 49 cggccatggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatgg 105 |||| ||||||||||||||||||||| ||||||| ||||| | |||||||| |||| Sbjct: 18984566 cggcgatggcgttcttccggggcctgaccgcggtttcgaggattcgatcccgcatgg 18984622
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 131 bits (66), Expect = 3e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 340 agggtattcgatttagaggtctctctattccagagtgccagaaagtactgccggctgcag 399 |||||||||| || || |||||||| |||||||||||||||||||| ||||| | ||| Sbjct: 19144924 agggtattcgtttcaggggtctctcgattccagagtgccagaaagtgctgccaacagcaa 19144983 Query: 400 ttaaagatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 |||||| |||||||||||| || |||||||||||||||||||||||||| |||||||| Sbjct: 19144984 ttaaaggtggagaacctttgccggagggtctcctttggcttcttttgactggaaaggt 19145041 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 523 atgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagtttacca 582 |||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19146051 atgtgtataaggcaattgatgctctccctgtaactgctcatccaatgacacagtttacca 19146110 Query: 583 cagtagtgatggcact 598 ||| ||||||||||| Sbjct: 19146111 caggggtgatggcact 19146126 Score = 95.6 bits (48), Expect = 2e-16 Identities = 66/72 (91%) Strand = Plus / Plus Query: 206 acaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagcttggaaacataac 265 |||||||||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct: 19144205 acaggatcgcttaaagaaacttaaatcagaacatgggaaggtccagcttggaaacataac 19144264 Query: 266 tgtggacatggt 277 ||| || ||||| Sbjct: 19144265 tgttgatatggt 19144276 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 454 aggtgccaaccaaggagcaagttgatgctctatcaaaggagttgcttagccgttcgactg 513 ||||||||||||| |||||||| ||||||||||||||||| ||| ||| |||||||| || Sbjct: 19145239 aggtgccaaccaaagagcaagtcgatgctctatcaaaggaattggttacccgttcgagtg 19145298 Query: 514 ttccaggt 521 |||||||| Sbjct: 19145299 ttccaggt 19145306 Score = 87.7 bits (44), Expect = 4e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 275 ggtccttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgaccc 334 ||||||||| ||||||||||| |||| ||||||||| ||||||||||| || |||||||| Sbjct: 19144376 ggtccttggcgggatgagaggaatgattggaatgctttgggaaacatcattgcttgaccc 19144435 Query: 335 ggaggagg 342 |||||||| Sbjct: 19144436 ggaggagg 19144443 Score = 87.7 bits (44), Expect = 4e-14 Identities = 47/48 (97%) Strand = Plus / Plus Query: 107 acaggatgccaccacgcttggtggtgtgagatggctgcagatgcagag 154 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19143368 acaggaggccaccacgcttggtggtgtgagatggctgcagatgcagag 19143415 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 168 gatcttaggtcccagctgcaggaaatgattccggagcaacagg 210 ||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 19143606 gatcttaagtcccagctgcaggaattgattcccgagcaacagg 19143648 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 49 cggccatggcgttcttccggggcctggccgcggtctcgagactgcgatcccgtatgg 105 |||| ||||||||||||||||||||| ||||||| ||||| | |||||||| |||| Sbjct: 19143215 cggcgatggcgttcttccggggcctgaccgcggtttcgaggattcgatcccgcatgg 19143271
>emb|X17528.1|ATMTCITRN Arabidopsis thaliana mRNA for mitochondrial citrate synthetase Length = 1680 Score = 121 bits (61), Expect = 3e-24 Identities = 182/221 (82%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 135 agatggctgcagatgcagagcgcttccgatctcgatcttaggtcccagctgcaggaaatg 194 |||||| | |||||||||||| || |||| || || || | ||| |||||||| || | Sbjct: 142 agatggattcagatgcagagctctaccgacctggacctgaagtcgcagctgcaagagtta 201 Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggtccagctt 254 |||||||| || |||| || |||||||||| |||||||| ||||| |||||||| || Sbjct: 202 attccggaacacaaggaccgtctgaagaaactgaagtcagaacatgggaaggtccaactg 261 Query: 255 ggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctgg 314 |||||||| ||||| || ||||| ||||||| |||||||||||||||||| |||| ||| Sbjct: 262 ggaaacatcactgttgatatggttattggtggaatgagagggatgactggattgctttgg 321 Query: 315 gaaacatctttacttgacccggaggagggtattcgatttag 355 ||||| || || ||||||||||| || |||||||| ||||| Sbjct: 322 gaaacctcattgcttgacccggaaga-ggtattcgctttag 361
>dbj|AB017159.1| Daucus carota mRNA for citrate synthase, complete cds Length = 1859 Score = 115 bits (58), Expect = 2e-22 Identities = 115/134 (85%) Strand = Plus / Plus Query: 222 aaacttaagtcagagcatggaaaggtccagcttggaaacataactgtggacatggtcctt 281 |||||||| |||| ||||||||||| ||||| |||||||||||||| || ||||| ||| Sbjct: 328 aaacttaaagcagaacatggaaaggttcagctgggaaacataactgttgatatggtactt 387 Query: 282 ggtgggatgagagggatgactggaatgctctgggaaacatctttacttgacccggaggag 341 || || |||||||||||||| ||| | || |||||||| |||||||||||||| || ||| Sbjct: 388 ggcggtatgagagggatgacaggacttctatgggaaacctctttacttgacccagaagag 447 Query: 342 ggtattcgatttag 355 || ||||| ||||| Sbjct: 448 ggaattcgctttag 461 Score = 69.9 bits (35), Expect = 9e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 407 tggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaa 466 ||||||||| || ||||||||||| || ||||||||||| || |||||||| ||||| || Sbjct: 513 tggagaaccattgcctgagggtctgctctggcttcttttaactggaaaggtaccaactaa 572 Query: 467 ggagcaagttgatgc 481 |||||||| ||||| Sbjct: 573 agagcaagtagatgc 587
>gb|U19481.1|CMU19481 Citrus maxima citrate synthase (cit) mRNA, nuclear gene encoding mitochondrial protein, complete cds Length = 1733 Score = 111 bits (56), Expect = 3e-21 Identities = 161/196 (82%) Strand = Plus / Plus Query: 187 aggaaatgattccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaagg 246 ||||||||||||| || |||||||| ||| |||||||| | |||||||| | |||||| | Sbjct: 190 aggaaatgattccagaacaacaggagcgcctgaagaaagtgaagtcagaccttggaaaag 249 Query: 247 tccagcttggaaacataactgtggacatggtccttggtgggatgagagggatgactggaa 306 |||||| ||||| || || | ||| |||| |||| ||||||||||| |||||||| Sbjct: 250 cccagctgggaaatattaccattgacgtggtaattggcgggatgagaggaatgactggct 309 Query: 307 tgctctgggaaacatctttacttgacccggaggagggtattcgatttagaggtctctcta 366 | || |||||||| || ||||||||||| || ||||| ||||| ||| | ||||| |||| Sbjct: 310 tactttgggaaacctcattacttgaccctgatgagggaattcgctttcggggtctgtcta 369 Query: 367 ttccagagtgccagaa 382 |||| ||||||||||| Sbjct: 370 ttcctgagtgccagaa 385 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 404 agatggagaacctttacctgagggtctcctttggcttcttttgaccggaaaggt 457 ||||||||||||||| ||||||||||| |||||||||||||| || |||||||| Sbjct: 407 agatggagaacctttgcctgagggtcttctttggcttcttttaactggaaaggt 460
>emb|X84226.1|NTCITSYNH N.tabacum mRNA for citrate synthase Length = 1747 Score = 107 bits (54), Expect = 4e-20 Identities = 129/154 (83%) Strand = Plus / Plus Query: 181 agctgcaggaaatgattccggagcaacaggatcgcttgaagaaacttaagtcagagcatg 240 ||||||| ||| ||||||| || |||||||||||| | ||||| || ||||||||||||| Sbjct: 197 agctgcaagaattgattccagaacaacaggatcgcctaaagaagctcaagtcagagcatg 256 Query: 241 gaaaggtccagcttggaaacataactgtggacatggtccttggtgggatgagagggatga 300 ||||||| || | |||||||| || || || ||||| |||||||| |||||||| |||| Sbjct: 257 gaaaggttcaattgggaaacatcacagttgatatggttcttggtggaatgagaggaatga 316 Query: 301 ctggaatgctctgggaaacatctttacttgaccc 334 | ||| | || |||||||| || ||||||||||| Sbjct: 317 caggattactgtgggaaacctcattacttgaccc 350 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 420 cctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaagt 475 ||||| ||||| || ||||||||||| || |||||||||||| | || |||||||| Sbjct: 436 cctgaaggtcttctctggcttcttttaacaggaaaggtgccatcaaaagagcaagt 491
>ref|NM_115873.1| Arabidopsis thaliana citrate (SI)-synthase/ transferase, transferring acyl groups, acyl groups converted into alkyl on transfer AT3G60100 mRNA, complete cds Length = 1302 Score = 75.8 bits (38), Expect = 1e-10 Identities = 106/126 (84%), Gaps = 2/126 (1%) Strand = Plus / Plus Query: 195 attccggagcaacaggatcgcttgaagaaacttaagtcagagcatggaaaggt-ccagct 253 ||||| || |||||||| || ||||||||||| || ||||| || |||||||| |||| | Sbjct: 40 attccagaacaacaggaccgtttgaagaaactgaaatcagaacaaggaaaggttccag-t 98 Query: 254 tggaaacataactgtggacatggtccttggtgggatgagagggatgactggaatgctctg 313 || ||||| || || || ||||| |||||||| |||||||||||||||||| | ||||| Sbjct: 99 ggggaacatcaccgttgatatggtacttggtggaatgagagggatgactggattactctg 158 Query: 314 ggaaac 319 |||||| Sbjct: 159 ggaaac 164 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 420 cctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaag 474 |||||| |||| || |||||||| || || |||||||||||||| || ||||||| Sbjct: 265 cctgagagtcttctgtggcttctattaactggaaaggtgccaactaaagagcaag 319
>emb|X84228.1|BVCITSYNH B.vulgaris mRNA for citrate synthase Length = 1551 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 420 cctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaagttgat 479 ||||| ||||| |||||||||||||| ||||||||||| || | ||| |||||||| ||| Sbjct: 265 cctgaaggtcttctttggcttcttttaaccggaaaggttcctagcaaagagcaagtagat 324 Query: 480 gctctatca 488 ||||||||| Sbjct: 325 gctctatca 333
>gb|AC004521.3| Arabidopsis thaliana chromosome 2 clone F4I1 map m336, complete sequence Length = 118327 Score = 69.9 bits (35), Expect = 9e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 280 ttggtgggatgagagggatgactggaatgctctgggaaacatctttacttgacccggagg 339 ||||||| |||||||||||||||||| |||| |||||||| || || ||||||||||| | Sbjct: 42824 ttggtggaatgagagggatgactggattgctttgggaaacctcattgcttgacccggaag 42883 Query: 340 agg 342 ||| Sbjct: 42884 agg 42886
>emb|AL138658.1|ATT2O9 Arabidopsis thaliana DNA chromosome 3, BAC clone T2O9 Length = 90823 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 279 cttggtgggatgagagggatgactggaatgctctgggaaac 319 |||||||| |||||||||||||||||| | ||||||||||| Sbjct: 30961 cttggtggaatgagagggatgactggattactctgggaaac 31001
>emb|X84227.1|PHCITSYNH Populus hybrid mRNA for citrate synthase Length = 1378 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 521 ttatgtctataaggctatagatgctctccctgtaactgctcatccaatgacacagttt 578 |||||||| |||||| || ||||| | ||||| ||||||||||||||||| |||||| Sbjct: 81 ttatgtctttaaggccattgatgccttacctgtcactgctcatccaatgactcagttt 138
>emb|X75082.1|STCITS S.tuberosum mRNA for mitochondrial citrate-synthase Length = 1891 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 420 cctgagggtctcctttggcttcttttgaccggaaaggtgccaaccaaggagcaagt 475 ||||| ||||| || ||||||||||| || |||||||||||| | || |||||||| Sbjct: 439 cctgaaggtcttctctggcttcttttaacaggaaaggtgccatcaaaagagcaagt 494
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 gcccaccttccccttccccacg 28 |||||||||||||||||||||| Sbjct: 12916429 gcccaccttccccttccccacg 12916450
>emb|AL353810.9| Human DNA sequence from clone RP11-261H15 on chromosome 9, complete sequence Length = 111330 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 366 attccagagtgccagaaagtac 387 |||||||||||||||||||||| Sbjct: 58451 attccagagtgccagaaagtac 58430
>gb|AC118675.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0094H06, from chromosome 3, complete sequence Length = 118075 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 7 gcccaccttccccttccccacg 28 |||||||||||||||||||||| Sbjct: 23080 gcccaccttccccttccccacg 23059
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 gcccaccttccccttccccacg 28 |||||||||||||||||||||| Sbjct: 12913192 gcccaccttccccttccccacg 12913213
>ref|NM_126849.1| Arabidopsis thaliana unknown protein AT2G11270 mRNA, complete cds Length = 252 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 273 atggtccttggtgggatgagagggatgac 301 ||||| |||||||| |||||||||||||| Sbjct: 193 atggtacttggtggaatgagagggatgac 221
>gb|AY796340.1| Homo sapiens calpain 1, (mu/I) large subunit (CAPN1) gene, complete cds Length = 34135 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 actgctcatccaatgacacag 575 ||||||||||||||||||||| Sbjct: 4804 actgctcatccaatgacacag 4824
>gb|AC119163.23| Mus musculus chromosome 3, clone RP24-527P22, complete sequence Length = 202675 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 264 actgtggacatggtccttggt 284 ||||||||||||||||||||| Sbjct: 168338 actgtggacatggtccttggt 168318
>emb|AL161630.12| Human DNA sequence from clone RP11-500B12 on chromosome 9 Contains a novel gene, a ribosomal protein L35a (RPL35A) and a CpG island. pseudogene, complete sequence Length = 200970 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 217 tgaagaaacttaagtcagagcatgg 241 ||||||||||||||||| ||||||| Sbjct: 49163 tgaagaaacttaagtcacagcatgg 49187
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gagatggctgcagatgcagag 154 ||||||||||||||||||||| Sbjct: 75432 gagatggctgcagatgcagag 75412
>dbj|AP007227.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0032L17 Length = 165808 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/52 (86%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 545 tctccctgtaactgctcatccaatgacacagtttaccacagtagtgatggca 596 ||||||||||||| ||||| | |||||| |||||||||| |||||||||| Sbjct: 118874 tctccctgtaactactcattcgatgaca--gtttaccacatgagtgatggca 118825
>dbj|AP005056.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0689B12 Length = 154745 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/52 (86%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 545 tctccctgtaactgctcatccaatgacacagtttaccacagtagtgatggca 596 ||||||||||||| ||||| | |||||| |||||||||| |||||||||| Sbjct: 26633 tctccctgtaactactcattcgatgaca--gtttaccacatgagtgatggca 26584
>emb|CT030146.7| Mouse DNA sequence from clone RP24-150F7 on chromosome 12, complete sequence Length = 79717 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctctattccagagtgccaga 381 ||||||||||||||||||||| Sbjct: 9685 tctctattccagagtgccaga 9665
>dbj|AP003068.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-399J13, complete sequence Length = 187934 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 actgctcatccaatgacacag 575 ||||||||||||||||||||| Sbjct: 144739 actgctcatccaatgacacag 144759
>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete sequence Length = 248166 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tctctattccagagtgccag 380 |||||||||||||||||||| Sbjct: 123157 tctctattccagagtgccag 123138
>gb|AC010419.6| Homo sapiens chromosome 5 clone CTD-2177J8, complete sequence Length = 124752 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 atttagaggtctctctattccaga 373 |||||||||||||||| ||||||| Sbjct: 20800 atttagaggtctctcttttccaga 20777
>gb|AC074142.3|AC074142 Homo sapiens chromosome 5 clone RP11-20B15, complete sequence Length = 161144 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 atttagaggtctctctattccaga 373 |||||||||||||||| ||||||| Sbjct: 103616 atttagaggtctctcttttccaga 103593
>gb|AC026456.5|AC026456 Homo sapiens chromosome 5 clone RP1-203L16, complete sequence Length = 99889 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 atttagaggtctctctattccaga 373 |||||||||||||||| ||||||| Sbjct: 69657 atttagaggtctctcttttccaga 69634
>emb|CR352558.1| Gallus gallus finished cDNA, clone ChEST342f4 Length = 708 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cagagtgccagaaagtactg 389 |||||||||||||||||||| Sbjct: 124 cagagtgccagaaagtactg 105
>gb|AC016655.6|AC016655 Homo sapiens chromosome 5 clone RPCI-1_36N5, complete sequence Length = 111388 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 350 atttagaggtctctctattccaga 373 |||||||||||||||| ||||||| Sbjct: 18351 atttagaggtctctcttttccaga 18328
>emb|AL929174.19| Zebrafish DNA sequence from clone CH211-117C16 in linkage group 12, complete sequence Length = 161610 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tctgggaaacatctttactt 329 |||||||||||||||||||| Sbjct: 44652 tctgggaaacatctttactt 44671
>emb|AL118557.5|CNS01DRT Human chromosome 14 DNA sequence BAC R-1033H12 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214175 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 ctgcagttaaagatggagaa 413 |||||||||||||||||||| Sbjct: 48695 ctgcagttaaagatggagaa 48714
>gb|AC168068.3| Mus musculus BAC clone RP23-99G15 from chromosome 8, complete sequence Length = 237728 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 522 tatgtctataaggctataga 541 |||||||||||||||||||| Sbjct: 141064 tatgtctataaggctataga 141083
>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome Length = 2056416 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 tgctccggccatggcgttct 63 |||||||||||||||||||| Sbjct: 498044 tgctccggccatggcgttct 498025
>dbj|AB009806.1| Homo sapiens gene for osteonidogen, intron 7 Length = 1254 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 ctgcagttaaagatggagaa 413 |||||||||||||||||||| Sbjct: 706 ctgcagttaaagatggagaa 687 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,877,744 Number of Sequences: 3902068 Number of extensions: 4877744 Number of successful extensions: 110461 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 54 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 110163 Number of HSP's gapped (non-prelim): 298 length of query: 601 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 578 effective length of database: 17,143,297,704 effective search space: 9908826072912 effective search space used: 9908826072912 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
