| Clone Name | basd14h03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1084 bits (547), Expect = 0.0 Identities = 547/547 (100%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119550 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 119491 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119490 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 119431 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119430 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 119371 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119370 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119311 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119310 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119251 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119250 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119191 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119190 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 119131 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119130 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 119071 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119070 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 119011 Query: 542 gataaag 548 ||||||| Sbjct: 119010 gataaag 119004 Score = 1084 bits (547), Expect = 0.0 Identities = 547/547 (100%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95344 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 95403 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95404 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 95463 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95464 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 95523 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95524 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95583 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95584 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95643 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95644 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 95703 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95704 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 95763 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 95823 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95824 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 95883 Query: 542 gataaag 548 ||||||| Sbjct: 95884 gataaag 95890
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118331 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 118272 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118271 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 118212 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118211 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 118152 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118151 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 118092 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118091 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 118032 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118031 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 117972 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117971 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 117912 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117911 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 117852 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117851 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 117792 Query: 542 gataaag 548 ||||||| Sbjct: 117791 gataaag 117785
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 119356 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 119296 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119295 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 119236 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119176 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119175 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119116 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119056 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118996 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118936 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118876 Query: 542 gataaag 548 ||||||| Sbjct: 118875 gataaag 118869 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95741 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 95800 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 95860 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95861 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 95920 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95980 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 96040 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96100 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96160 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96220 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96280 Query: 542 gataaag 548 ||||||| Sbjct: 96281 gataaag 96287
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119415 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 119356 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119355 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 119296 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119295 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 119236 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119176 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119175 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119116 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119056 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118996 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118936 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118876 Query: 542 gataaag 548 ||||||| Sbjct: 118875 gataaag 118869 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95741 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 95800 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 95860 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95861 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 95920 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95980 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 96040 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96100 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96160 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96220 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96221 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96280 Query: 542 gataaag 548 ||||||| Sbjct: 96281 gataaag 96287
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119364 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 119305 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119304 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 119245 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119244 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 119185 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119184 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119125 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119124 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119065 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119064 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119005 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119004 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118945 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118944 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118885 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118884 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118825 Query: 542 gataaag 548 ||||||| Sbjct: 118824 gataaag 118818 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95686 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 95745 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95746 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 95805 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95806 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 95865 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95866 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95925 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95926 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95985 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95986 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96045 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96046 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96105 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96106 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96165 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96166 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96225 Query: 542 gataaag 548 ||||||| Sbjct: 96226 gataaag 96232
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508319 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 31508378 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508379 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 31508438 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31508439 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 31508498 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508499 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 31508558 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508559 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 31508618 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508619 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 31508678 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508679 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 31508738 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508739 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 31508798 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508799 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 31508858 Query: 542 gataaag 548 ||||||| Sbjct: 31508859 gataaag 31508865 Score = 161 bits (81), Expect = 3e-36 Identities = 81/81 (100%) Strand = Plus / Minus Query: 468 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 528 aatgaccgctcagtgataaag 548 ||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaag 11513237 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 484 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 543 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 544 taaag 548 ||||| Sbjct: 25722118 taaag 25722114 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatcaccagctaaggccc 524 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 386 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 440 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84277 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 84218 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84217 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 84158 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84157 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 84098 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84097 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 84038 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84037 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 83978 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83977 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 83918 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83917 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 83858 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83857 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 83798 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 83738 Query: 542 gataaag 548 ||||||| Sbjct: 83737 gataaag 83731
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119384 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 119325 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119324 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 119265 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119264 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 119205 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119204 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119145 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119144 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119085 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119084 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 119025 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119024 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118965 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118964 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118905 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118904 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118845 Query: 542 gataaag 548 ||||||| Sbjct: 118844 gataaag 118838 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95734 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 95793 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95794 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 95853 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95854 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 95913 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95914 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95973 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95974 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 96033 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96034 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96093 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96094 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96153 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96154 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96213 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96214 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96273 Query: 542 gataaag 548 ||||||| Sbjct: 96274 gataaag 96280
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14508 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 14567 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14568 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 14627 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14628 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 14687 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14688 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 14747 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14748 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 14807 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14808 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 14867 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14868 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 14927 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14928 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 14987 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14988 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 15047 Query: 542 gataaag 548 ||||||| Sbjct: 15048 gataaag 15054 Score = 1053 bits (531), Expect = 0.0 Identities = 544/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122783 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 122842 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122843 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 122902 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 122903 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-ta 122961 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122962 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 123021 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123022 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 123081 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123082 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 123141 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123142 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 123201 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123202 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 123261 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123262 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 123321 Query: 542 gataaag 548 ||||||| Sbjct: 123322 gataaag 123328
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141316 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 141375 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141376 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 141435 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141436 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 141495 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141496 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 141555 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141556 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 141615 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141616 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 141675 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141676 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 141735 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141736 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 141795 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141796 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 141855 Query: 542 gataaag 548 ||||||| Sbjct: 141856 gataaag 141862
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93912 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 93971 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93972 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 94031 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 94032 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 94091 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94092 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 94151 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94152 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 94211 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94212 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 94271 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94272 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 94331 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94332 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 94391 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94392 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 94451 Query: 542 gataaag 548 ||||||| Sbjct: 94452 gataaag 94458
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58103 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 58044 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58043 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 57984 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 57983 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 57924 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57923 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 57864 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57863 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 57804 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57803 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 57744 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57743 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 57684 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57683 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 57624 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57623 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 57564 Query: 542 gataaag 548 ||||||| Sbjct: 57563 gataaag 57557
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27976 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 28035 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28036 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 28095 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 28096 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 28155 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28156 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 28215 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28216 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 28275 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28276 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 28335 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28336 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 28395 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28396 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 28455 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28456 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 28515 Query: 542 gataaag 548 ||||||| Sbjct: 28516 gataaag 28522
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268668 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 9268727 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268728 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 9268787 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9268788 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 9268847 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268848 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9268907 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268908 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9268967 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268968 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9269027 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269028 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9269087 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269088 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9269147 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269148 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9269207 Query: 542 gataaag 548 ||||||| Sbjct: 9269208 gataaag 9269214 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056582 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 9056641 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056642 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 9056701 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9056702 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 9056761 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056762 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9056821 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056822 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9056881 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056882 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9056941 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056942 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9057001 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057002 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9057061 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057062 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9057121 Query: 542 gataaag 548 ||||||| Sbjct: 9057122 gataaag 9057128 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228168 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 9228227 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228228 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 9228287 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9228288 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaaccta 9228347 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228348 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9228407 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228408 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9228467 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228468 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9228527 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228528 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9228587 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228588 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9228647 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228648 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9228707 Query: 542 gataaag 548 ||||||| Sbjct: 9228708 gataaag 9228714 Score = 1053 bits (531), Expect = 0.0 Identities = 544/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164757 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 9164816 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164817 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 9164876 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 9164877 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-ta 9164935 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164936 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 9164995 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164996 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9165055 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165056 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9165115 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165116 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9165175 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165176 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9165235 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165236 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9165295 Query: 542 gataaag 548 ||||||| Sbjct: 9165296 gataaag 9165302 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 3 tgaaaccgtgctgagctcccaagcagtgggagggga 38 ||||||||||||||||||||||||||||| |||||| Sbjct: 25171442 tgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938653 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 19938712 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938713 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 19938772 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19938773 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 19938832 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938833 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 19938892 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938893 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 19938952 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938953 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 19939012 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939013 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 19939072 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939073 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 19939132 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939133 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 19939192 Query: 542 gataaag 548 ||||||| Sbjct: 19939193 gataaag 19939199 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387520 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 10387579 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387580 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 10387639 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10387640 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 10387699 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387700 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10387759 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387760 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10387819 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10387879 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387880 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10387939 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387940 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10387999 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388000 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10388059 Query: 542 gataaag 548 ||||||| Sbjct: 10388060 gataaag 10388066 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276778 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 10276719 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276718 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 10276659 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10276658 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 10276599 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276598 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10276539 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276538 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10276479 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276478 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10276419 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276418 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10276359 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276358 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10276299 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276298 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10276239 Query: 542 gataaag 548 ||||||| Sbjct: 10276238 gataaag 10276232 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 393 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 452 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 453 tcggccagtgagacgatgggggataagcttcatcgtcgagag 494 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598835 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 31598894 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598895 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 31598954 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31598955 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 31599014 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599015 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 31599074 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599075 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 31599134 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599135 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 31599194 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599195 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 31599254 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599255 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 31599314 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599315 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 31599374 Query: 542 gataaag 548 ||||||| Sbjct: 31599375 gataaag 31599381 Score = 161 bits (81), Expect = 3e-36 Identities = 81/81 (100%) Strand = Plus / Minus Query: 468 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 528 aatgaccgctcagtgataaag 548 ||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaag 11510000 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Minus Query: 484 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 543 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 544 taaag 548 ||||| Sbjct: 25813427 taaag 25813423 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatcaccagctaaggccc 524 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 386 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 440 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526151 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 33526210 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526211 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 33526270 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33526271 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 33526330 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526331 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 33526390 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526391 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 33526450 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526451 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 33526510 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526511 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 33526570 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526571 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 33526630 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526631 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 33526690 Query: 542 gataaag 548 ||||||| Sbjct: 33526691 gataaag 33526697 Score = 246 bits (124), Expect = 6e-62 Identities = 127/128 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 16678053 gtgaaaccgtgctgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcct 16677994 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16677993 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 16677934 Query: 122 gagccgta 129 |||||||| Sbjct: 16677933 gagccgta 16677926 Score = 143 bits (72), Expect = 7e-31 Identities = 75/76 (98%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744738 gtgaaacagtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 32744679 Query: 62 gttgaagaatgagccg 77 |||||||||||||||| Sbjct: 32744678 gttgaagaatgagccg 32744663 Score = 127 bits (64), Expect = 4e-26 Identities = 70/72 (97%) Strand = Plus / Plus Query: 477 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 536 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 537 tcagtgataaag 548 |||||||||||| Sbjct: 527811 tcagtgataaag 527822
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47390 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 47331 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47330 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 47271 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 47270 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 47211 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47210 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 47151 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47150 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 47091 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47090 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 47031 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47030 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 46971 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46970 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 46911 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46910 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 46851 Query: 542 gataaag 548 ||||||| Sbjct: 46850 gataaag 46844
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71348 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 71407 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71408 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 71467 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 71468 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 71527 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71528 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 71587 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71588 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 71647 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71648 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 71707 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71708 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 71767 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71768 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 71827 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71828 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 71887 Query: 542 gataaag 548 ||||||| Sbjct: 71888 gataaag 71894
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 179 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 239 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 240 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 299 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 359 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 419 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 479 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 539 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 599 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 659 Query: 542 gataaag 548 ||||||| Sbjct: 660 gataaag 666
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 374 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 434 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 435 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 494 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 554 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 614 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 674 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 734 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 794 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 854 Query: 542 gataaag 548 ||||||| Sbjct: 855 gataaag 861
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 486 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 546 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 547 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 606 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 666 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 726 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 786 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 787 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 846 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 906 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 907 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 966 Query: 542 gataaag 548 ||||||| Sbjct: 967 gataaag 973
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 245 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 305 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 306 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 365 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 425 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 485 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 486 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 545 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 605 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 606 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 665 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 666 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 725 Query: 542 gataaag 548 ||||||| Sbjct: 726 gataaag 732
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 376 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 436 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 437 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 496 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 556 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 616 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 676 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 736 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 796 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 856 Query: 542 gataaag 548 ||||||| Sbjct: 857 gataaag 863
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 195 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 255 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 256 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 315 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 375 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 435 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 436 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 495 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 555 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 615 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 675 Query: 542 gataaag 548 ||||||| Sbjct: 676 gataaag 682
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 374 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 434 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 435 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 494 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 554 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 614 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 674 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 734 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 794 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 854 Query: 542 gataaag 548 ||||||| Sbjct: 855 gataaag 861
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 317 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 376 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 377 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 436 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 437 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 496 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 497 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 556 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 616 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 617 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 676 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 677 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 736 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 796 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 856 Query: 542 gataaag 548 ||||||| Sbjct: 857 gataaag 863
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949929 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 19949988 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949989 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 19950048 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19950049 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 19950108 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950109 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 19950168 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950169 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 19950228 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950229 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 19950288 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950289 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 19950348 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950349 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 19950408 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950409 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 19950468 Query: 542 gataaag 548 ||||||| Sbjct: 19950469 gataaag 19950475 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393559 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 10393618 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393619 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 10393678 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10393679 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 10393738 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393739 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10393798 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393799 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10393858 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393859 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10393918 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393919 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10393978 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393979 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10394038 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394039 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10394098 Query: 542 gataaag 548 ||||||| Sbjct: 10394099 gataaag 10394105 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282817 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 10282758 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282757 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 10282698 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10282697 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 10282638 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282637 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 10282578 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282577 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 10282518 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282517 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 10282458 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282457 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 10282398 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282397 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 10282338 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282337 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 10282278 Query: 542 gataaag 548 ||||||| Sbjct: 10282277 gataaag 10282271 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 393 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 452 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 453 tcggccagtgagacgatgggggataagcttcatcgtcgagag 494 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119358 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 119299 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119298 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 119239 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119238 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 119179 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119178 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 119119 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119118 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 119059 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119058 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 118999 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118998 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 118939 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118938 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 118879 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118878 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 118819 Query: 542 gataaag 548 ||||||| Sbjct: 118818 gataaag 118812 Score = 1076 bits (543), Expect = 0.0 Identities = 546/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95681 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 95740 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95741 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 95800 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95801 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 95860 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95861 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 95920 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95921 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 95980 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95981 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 96040 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96041 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 96100 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96101 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 96160 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96161 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 96220 Query: 542 gataaag 548 ||||||| Sbjct: 96221 gataaag 96227
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20743 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 20802 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 20803 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 20862 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 20863 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 20922 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20923 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 20982 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20983 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 21042 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21043 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 21102 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21103 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 21162 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21163 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 21222 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21223 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 21282 Query: 542 gataaag 548 ||||||| Sbjct: 21283 gataaag 21289 Score = 1031 bits (520), Expect = 0.0 Identities = 542/548 (98%), Gaps = 1/548 (0%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44375 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 44316 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 44315 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaaccctccg 44256 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 44255 gagccgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 44196 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44195 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 44136 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtg-aaatgccactcgaacccag 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 44135 tgatgttgaagaatcagcggatgagttgtggttaggggtgtaaatgccactcgaacccag 44076 Query: 301 agctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44075 agctagttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggt 44016 Query: 361 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44015 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 43956 Query: 421 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43955 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 43896 Query: 481 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43895 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 43836 Query: 541 tgataaag 548 |||||||| Sbjct: 43835 tgataaag 43828
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1004 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 945 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 944 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 885 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 884 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 825 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 765 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 705 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 645 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 585 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 525 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 465 Query: 542 gataaag 548 ||||||| Sbjct: 464 gataaag 458
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123214 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 123155 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123154 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 123095 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123094 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 123035 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123034 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 122975 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122974 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 122915 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122914 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122855 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 122795 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 122735 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122734 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 122675 Query: 542 gataaag 548 ||||||| Sbjct: 122674 gataaag 122668 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99623 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 99682 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99683 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 99742 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99743 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 99802 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99803 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 99862 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99863 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 99922 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99923 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 99982 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99983 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100042 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100043 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100102 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100103 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 100162 Query: 542 gataaag 548 ||||||| Sbjct: 100163 gataaag 100169
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123931 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 123872 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123871 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 123812 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123811 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 123752 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123751 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 123692 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123691 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 123632 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123631 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 123572 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123571 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 123512 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123511 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 123452 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123451 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 123392 Query: 542 gataaag 548 ||||||| Sbjct: 123391 gataaag 123385 Score = 1068 bits (539), Expect = 0.0 Identities = 545/547 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100300 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 100359 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 100360 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 100419 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 100420 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 100479 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100480 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 100539 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100540 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 100599 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100600 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 100659 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100660 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100719 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100720 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100779 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100780 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 100839 Query: 542 gataaag 548 ||||||| Sbjct: 100840 gataaag 100846
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1063 bits (536), Expect = 0.0 Identities = 542/544 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 314 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 373 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 374 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 433 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 434 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 493 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 494 ggtgatctatccatgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgac 553 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 613 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 614 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 673 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 674 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 733 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 793 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 853 Query: 542 gata 545 |||| Sbjct: 854 gata 857
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1061 bits (535), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241613 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 9241554 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241553 gttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccg 9241494 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9241493 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 9241434 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 9241433 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtc 9241374 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241373 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 9241314 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241313 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 9241254 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241253 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 9241194 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241193 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 9241134 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241133 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 9241074 Query: 542 gataaag 548 ||||||| Sbjct: 9241073 gataaag 9241067 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 358 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 417 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 418 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 477 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 478 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 523 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 40.1 bits (20), Expect = 7.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 512 ccagctaaggcccctaaatgaccgctcagtgataaa 547 ||||||||| || ||||||||||||| ||| ||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaa 3580350
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1061 bits (535), Expect = 0.0 Identities = 544/547 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52826 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 52767 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52766 gttgaagaatgagctggcgactcataggcagtggcttggttaagggaacggaacccaccg 52707 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 52706 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 52647 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 52646 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtc 52587 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52586 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 52527 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52526 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 52467 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52466 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 52407 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52406 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 52347 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52346 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 52287 Query: 542 gataaag 548 ||||||| Sbjct: 52286 gataaag 52280
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 1057 bits (533), Expect = 0.0 Identities = 536/537 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 312 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 371 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 372 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 431 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 432 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 491 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 492 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 551 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 552 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 611 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 671 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 672 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 731 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 732 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 791 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 538 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 792 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1045 bits (527), Expect = 0.0 Identities = 543/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123154 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 123095 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123094 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 123035 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123034 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 122975 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122974 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 122915 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122914 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 122855 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122854 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 122795 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122794 aagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 122736 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122735 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 122676 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 122675 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 122616 Query: 542 gataaag 548 ||||||| Sbjct: 122615 gataaag 122609 Score = 1045 bits (527), Expect = 0.0 Identities = 543/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99583 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 99642 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99643 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 99702 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99703 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 99762 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99763 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 99822 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99823 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 99882 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99883 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 99942 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 99943 aagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 100001 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100002 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 100061 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 100062 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 100121 Query: 542 gataaag 548 ||||||| Sbjct: 100122 gataaag 100128
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1045 bits (527), Expect = 0.0 Identities = 543/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5936 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 5995 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5996 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 6055 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6056 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 6115 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6116 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 6175 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6176 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 6235 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6236 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 6295 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 6296 aagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 6354 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6355 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 6414 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 6415 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 6474 Query: 542 gataaag 548 ||||||| Sbjct: 6475 gataaag 6481
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1045 bits (527), Expect = 0.0 Identities = 543/547 (99%), Gaps = 1/547 (0%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 583 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 584 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 643 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 644 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 703 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 763 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 823 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 883 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 aagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 942 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 943 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 1002 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagt 541 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1003 tcatcgtcgagagggaaacagcccggatcaccagctaaggccccttaatgaccgctcagt 1062 Query: 542 gataaag 548 ||||||| Sbjct: 1063 gataaag 1069
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1029 bits (519), Expect = 0.0 Identities = 522/523 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 520 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 579 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 639 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 640 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 699 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 759 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 819 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 879 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 880 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 939 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 940 agatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagct 999 Query: 482 tcatcgtcgagagggaaacagcccggatcaccagctaaggccc 524 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1000 tcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 987 bits (498), Expect = 0.0 Identities = 537/549 (97%), Gaps = 2/549 (0%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122696 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 122637 Query: 62 gttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaacccac 119 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122636 gttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaacccac 122577 Query: 120 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 179 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122576 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 122517 Query: 180 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122516 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccg 122457 Query: 240 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122456 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 122397 Query: 300 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122396 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 122337 Query: 360 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 419 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122336 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaata 122277 Query: 420 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 479 ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| Sbjct: 122276 ctagatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataag 122217 Query: 480 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 539 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122216 cttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctca 122157 Query: 540 gtgataaag 548 |||||||| Sbjct: 122156 atgataaag 122148
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 987 bits (498), Expect = 0.0 Identities = 537/549 (97%), Gaps = 2/549 (0%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825237 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 12825178 Query: 62 gttgaagaatgagccggcgactcataggcagtg--gcttggttaagggaacggaacccac 119 ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12825177 gttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacggaacccac 12825118 Query: 120 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 179 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12825117 cggagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacc 12825058 Query: 180 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 239 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12825057 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccg 12824998 Query: 240 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824997 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 12824938 Query: 300 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824937 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 12824878 Query: 360 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 419 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12824877 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaata 12824818 Query: 420 ctagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataag 479 ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||| Sbjct: 12824817 ctagatatgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataag 12824758 Query: 480 cttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctca 539 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12824757 cttcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgctca 12824698 Query: 540 gtgataaag 548 |||||||| Sbjct: 12824697 atgataaag 12824689
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 950 bits (479), Expect = 0.0 Identities = 482/483 (99%) Strand = Plus / Plus Query: 66 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 125 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagc 61 Query: 126 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 185 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 186 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 245 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 246 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 305 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 306 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 365 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 366 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 426 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 486 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 545 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 481 Query: 546 aag 548 ||| Sbjct: 482 aag 484
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 948 bits (478), Expect = 0.0 Identities = 481/482 (99%) Strand = Plus / Plus Query: 67 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 126 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggagcc 60 Query: 127 gtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtga 186 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtga 120 Query: 187 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 180 Query: 247 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 240 Query: 307 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagca 300 Query: 367 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 360 Query: 427 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 420 Query: 487 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 gtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataa 480 Query: 547 ag 548 || Sbjct: 481 ag 482
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 926 bits (467), Expect = 0.0 Identities = 518/535 (96%), Gaps = 5/535 (0%) Strand = Plus / Minus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 141578 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 141519 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 141518 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 141464 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141463 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 141404 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 141403 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 141344 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141343 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 141284 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141283 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 141224 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141223 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 141164 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141163 aaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 141104 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141103 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 141049 Score = 926 bits (467), Expect = 0.0 Identities = 518/535 (96%), Gaps = 5/535 (0%) Strand = Plus / Plus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 112079 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 112138 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112139 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 112193 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 112194 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 112253 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 112254 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 112313 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112314 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 112373 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112374 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 112433 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112434 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 112493 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112494 aaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 112553 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112554 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 112608
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 922 bits (465), Expect = 0.0 Identities = 517/533 (96%), Gaps = 6/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 133691 agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagc 133632 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 133631 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 133577 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133576 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 133517 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 133516 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 133457 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133456 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 133397 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133396 cccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcgg 133337 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133336 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 133277 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133276 aatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 133218 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133217 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 133165 Score = 922 bits (465), Expect = 0.0 Identities = 517/533 (96%), Gaps = 6/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 104280 agctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatgagc 104339 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 104340 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 104394 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104395 gcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 104454 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 104455 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 104514 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104515 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 104574 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104575 cccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcgg 104634 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104635 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 104694 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104695 aatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 104753 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104754 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 104806
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 900 bits (454), Expect = 0.0 Identities = 515/535 (96%), Gaps = 9/535 (1%) Strand = Plus / Minus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 127334 tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatga 127275 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 127274 gccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcga 127220 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127219 aagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 127160 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 127159 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 127100 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127099 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 127040 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127039 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 126980 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126979 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 126920 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126919 a----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 126864 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126863 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 126809 Score = 900 bits (454), Expect = 0.0 Identities = 515/535 (96%), Gaps = 9/535 (1%) Strand = Plus / Plus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 107588 tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaagaatga 107647 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct: 107648 gccggcgactcataggcagtggcttggttaagggaat-----ccaccgtagccgtagcga 107702 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107703 aagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 107762 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 107763 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 107822 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107823 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 107882 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107883 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 107942 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107943 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 108002 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108003 a----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 108058 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108059 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 108113
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 898 bits (453), Expect = 0.0 Identities = 459/461 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 402 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 401 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 342 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 341 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 282 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 222 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 162 Query: 302 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggta 102 Query: 362 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 42 Query: 422 agatatgacccaaaaataacaggggtcaaggtcggccagtg 462 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 41 agatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 896 bits (452), Expect = 0.0 Identities = 518/540 (95%), Gaps = 10/540 (1%) Strand = Plus / Minus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 139056 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 138997 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 138996 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcga 138942 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138941 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 138882 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 138881 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 138822 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138821 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 138762 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138761 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 138702 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc- 432 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138701 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 138642 Query: 433 ----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 488 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138641 aaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 138582 Query: 489 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138581 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 138522 Score = 896 bits (452), Expect = 0.0 Identities = 518/540 (95%), Gaps = 10/540 (1%) Strand = Plus / Plus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 110889 tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaagaatga 110948 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 110949 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccatagcga 111003 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111004 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 111063 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 111064 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 111123 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111124 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 111183 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111184 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 111243 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc- 432 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111244 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccc 111303 Query: 433 ----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 488 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111304 aaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgt 111363 Query: 489 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111364 cgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 111423
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 886 bits (447), Expect = 0.0 Identities = 489/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 131046 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 130992 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130991 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 130932 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 130872 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130871 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 130812 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 130811 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130752 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130751 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 130692 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130691 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130632 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 130631 taaatgaccgctcagtgataaag 130609 Score = 886 bits (447), Expect = 0.0 Identities = 489/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 103589 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 103643 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103644 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 103703 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103704 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 103763 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103764 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 103823 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 103824 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 103883 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 103884 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 103943 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103944 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104003 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 104004 taaatgaccgctcagtgataaag 104026
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 886 bits (447), Expect = 0.0 Identities = 489/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 622 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 676 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 677 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 736 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 796 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 856 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 857 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 916 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 917 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 976 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1036 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 1037 taaatgaccgctcagtgataaag 1059
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 136405 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 136348 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136347 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 136293 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136292 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 136233 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 136232 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 136173 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136172 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 136113 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136112 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 136053 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 136052 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 135993 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135992 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 135933 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135932 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 135880 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 107152 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 107209 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 107210 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 107264 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 107265 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 107324 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 107325 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 107384 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107385 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107444 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107445 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107504 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107505 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 107564 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107565 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 107624 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107625 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 107677
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135013 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 134956 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134955 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134901 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134900 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134841 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134840 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134781 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134780 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134721 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134720 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134661 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134660 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 134601 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134600 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 134541 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134540 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 134488 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106023 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106080 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106081 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106135 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106136 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106195 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106196 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106255 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106315 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106375 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106376 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 106435 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106436 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 106495 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106548
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 136059 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 136002 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 136001 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135947 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135946 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135887 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135886 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135827 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135826 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135767 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135766 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135707 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135706 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 135647 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135646 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 135587 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135586 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 135534 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106366 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106423 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106424 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106478 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106479 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106538 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106539 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106598 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106599 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106658 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106659 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106718 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106719 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 106778 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106779 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 106838 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106839 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106891
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135148 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135091 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135090 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135036 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135035 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134976 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134975 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134916 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134915 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134856 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134855 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134796 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134795 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 134736 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134735 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 134676 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134675 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 134623 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106195 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106252 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106253 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106307 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106308 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106367 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106368 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106427 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106428 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106487 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106488 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106547 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106548 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 106607 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106608 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 106667 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106668 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106720
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135146 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135089 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135088 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135034 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135033 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134974 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134973 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134914 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134913 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134854 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134853 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134794 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134793 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 134734 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134733 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 134674 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134673 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 134621 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106192 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106249 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106250 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106304 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106305 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106364 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106365 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106424 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106425 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106484 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106485 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106544 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106545 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 106604 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106605 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 106664 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106665 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106717
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135058 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135001 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135000 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134946 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134945 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134886 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134885 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134826 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134825 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134766 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134765 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134706 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134705 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 134646 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134645 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 134586 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134585 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 134533 Score = 884 bits (446), Expect = 0.0 Identities = 512/533 (96%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106070 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106127 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106128 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106182 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106183 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106242 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106243 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106302 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106303 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106362 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106363 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106422 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106423 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 106482 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106483 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 106542 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106543 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106595
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 878 bits (443), Expect = 0.0 Identities = 488/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 138883 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 138829 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138828 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138769 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138768 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138709 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138708 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138649 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138648 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138589 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 138588 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 138529 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138528 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138469 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 138468 taaatgaccgctcagtgataaag 138446 Score = 878 bits (443), Expect = 0.0 Identities = 488/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110214 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110268 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110269 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110328 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110329 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110388 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110389 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110448 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110449 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110508 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct: 110509 gcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgaga 110568 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110569 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110628 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 110629 taaatgaccgctcagtgataaag 110651
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 878 bits (443), Expect = 0.0 Identities = 488/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132154 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132100 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132099 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132040 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132039 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131980 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131979 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131920 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131919 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131860 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131859 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131800 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131799 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131740 Query: 526 taaatgaccgctcagtgataaag 548 ||||||| ||||||||||||||| Sbjct: 131739 taaatgatcgctcagtgataaag 131717 Score = 878 bits (443), Expect = 0.0 Identities = 488/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104724 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104778 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104779 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104838 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104839 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104898 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104958 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104959 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105018 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105019 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105078 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105079 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105138 Query: 526 taaatgaccgctcagtgataaag 548 ||||||| ||||||||||||||| Sbjct: 105139 taaatgatcgctcagtgataaag 105161
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 878 bits (443), Expect = 0.0 Identities = 488/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132147 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132093 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132092 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 132033 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132032 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131973 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131972 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131913 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131912 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 131853 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 131852 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 131793 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131792 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131733 Query: 526 taaatgaccgctcagtgataaag 548 ||||||| ||||||||||||||| Sbjct: 131732 taaatgatcgctcagtgataaag 131710 Score = 878 bits (443), Expect = 0.0 Identities = 488/503 (97%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104722 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104776 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104777 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104836 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104837 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104896 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104897 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104956 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104957 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105016 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105017 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgaga 105076 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105077 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105136 Query: 526 taaatgaccgctcagtgataaag 548 ||||||| ||||||||||||||| Sbjct: 105137 taaatgatcgctcagtgataaag 105159
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135767 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135710 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135709 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135655 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135654 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135595 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135594 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135535 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135534 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135475 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135474 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135415 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135414 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 135355 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135354 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 135295 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135294 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 135242 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106863 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106920 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106921 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106975 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106976 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 107035 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 107036 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 107095 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107096 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107155 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107156 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107215 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107216 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 107275 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107276 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 107335 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107336 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 107388
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 2057 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 2114 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2115 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 2169 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2170 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 2229 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 2230 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 2289 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2290 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 2349 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2350 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 2409 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2410 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 2469 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2470 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 2529 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2530 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 2582
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135765 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135708 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135707 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135653 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135652 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135593 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135592 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135533 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135532 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135473 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135472 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135413 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135412 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 135353 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135352 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 135293 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135292 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 135240 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106861 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106918 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106919 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106973 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106974 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 107033 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 107034 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 107093 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107094 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 107153 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107154 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 107213 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107214 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 107273 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107274 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 107333 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107334 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 107386
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135496 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 135439 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135438 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 135384 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135383 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 135324 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 135323 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 135264 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135263 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 135204 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135203 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 135144 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135143 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 135084 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 135083 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 135024 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135023 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 134971 Score = 876 bits (442), Expect = 0.0 Identities = 511/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106642 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106699 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106700 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106754 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106755 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106814 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106815 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106874 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106875 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106934 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106935 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106994 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106995 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaa 107054 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 107055 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 107114 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107115 gaaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 107167
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 874 bits (441), Expect = 0.0 Identities = 486/501 (97%), Gaps = 5/501 (0%) Strand = Plus / Minus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 108 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 167 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 131168 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 131114 Query: 168 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 227 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 131113 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 131054 Query: 228 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131053 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 130994 Query: 288 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130993 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 130934 Query: 348 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 130933 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 130874 Query: 408 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 467 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 130873 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 130814 Query: 468 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130813 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 130754 Query: 528 aatgaccgctcagtgataaag 548 ||||||||||||||||||||| Sbjct: 130753 aatgaccgctcagtgataaag 130733 Score = 874 bits (441), Expect = 0.0 Identities = 486/501 (97%), Gaps = 5/501 (0%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 108 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctta 167 ||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 102277 aac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgctta 102331 Query: 168 tggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcag 227 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct: 102332 tggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtgg 102391 Query: 228 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102392 aggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgc 102451 Query: 288 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102452 cactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactg 102511 Query: 348 gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 102512 gacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggc 102571 Query: 408 aaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacg 467 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 102572 aaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacg 102631 Query: 468 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102632 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 102691 Query: 528 aatgaccgctcagtgataaag 548 ||||||||||||||||||||| Sbjct: 102692 aatgaccgctcagtgataaag 102712
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 874 bits (441), Expect = 0.0 Identities = 510/532 (95%), Gaps = 7/532 (1%) Strand = Plus / Minus Query: 17 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 76 ||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| Sbjct: 142345 gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagcc 142288 Query: 77 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 136 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 142287 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 142233 Query: 137 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 196 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142232 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 142173 Query: 197 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 256 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 142172 accaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatc 142113 Query: 257 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 142112 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctcc 142053 Query: 317 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142052 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141993 Query: 377 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 436 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141992 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 141933 Query: 437 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 496 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 141932 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagaggg 141873 Query: 497 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141872 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 141821 Score = 874 bits (441), Expect = 0.0 Identities = 510/532 (95%), Gaps = 7/532 (1%) Strand = Plus / Plus Query: 17 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 76 ||||||||||||||||||| | || | ||||||||||||||||||||||||||||||| Sbjct: 110983 gctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagcc 111040 Query: 77 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 136 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 111041 ggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaag 111095 Query: 137 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 196 |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111096 cgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 111155 Query: 197 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 256 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111156 accaggatgaagcttggatgaaactaagcggaggtccgaaccgactgatgttgaagaatc 111215 Query: 257 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 316 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 111216 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctcgttctcc 111275 Query: 317 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111276 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 111335 Query: 377 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 436 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111336 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 111395 Query: 437 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 496 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 111396 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagaggg 111455 Query: 497 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 111456 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaag 111507
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135280 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135226 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135225 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135166 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135165 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135106 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135105 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135046 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135045 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 134986 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 134985 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 134926 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 134866 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 134865 taaatgaccgctcagtgataaag 134843 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106626 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106680 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106681 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106740 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 106800 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106801 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 106860 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 106861 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 106920 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 106921 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 106980 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106981 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107040 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 107041 taaatgaccgctcagtgataaag 107063
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 135559 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 135505 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135504 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 135445 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135444 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 135385 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135384 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 135325 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 135324 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 135265 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 135264 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 135205 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135204 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 135145 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 135144 taaatgaccgctcagtgataaag 135122 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| || |||| |||||||||||| Sbjct: 106848 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatggggcaattgtcactgct 106902 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106903 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 106962 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106963 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 107022 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107023 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 107082 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 107083 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 107142 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 107143 gcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgaga 107202 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107203 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 107262 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 107263 taaatgaccgctcagtgataaag 107285
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139088 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139034 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139033 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 138974 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138973 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 138914 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138913 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 138854 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 138853 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 138794 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 138793 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 138734 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138733 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 138674 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 138673 taaatgaccgctcagtgataaag 138651 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110211 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110265 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110266 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110325 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110326 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110385 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110386 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 110445 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110446 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110505 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| Sbjct: 110506 gcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgaga 110565 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110566 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110625 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 110626 taaatgaccgctcagtgataaag 110648
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 870 bits (439), Expect = 0.0 Identities = 487/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 718 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 772 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 773 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 832 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 892 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 952 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 953 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1012 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 1013 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 1072 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1132 Query: 526 taaatgaccgctcagtgataaag 548 ||||||| ||||||||||||||| Sbjct: 1133 taaatgatcgctcagtgataaag 1155
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 868 bits (438), Expect = 0.0 Identities = 510/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 135025 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 134968 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 134967 cggcgactaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 134913 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134912 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 134853 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 134852 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 134793 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134792 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 134733 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134732 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 134673 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 134672 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaa 134613 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 134612 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 134553 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134552 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 134500 Score = 868 bits (438), Expect = 0.0 Identities = 510/533 (95%), Gaps = 7/533 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 106037 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 106094 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 106095 cggcgactaataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 106149 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106150 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 106209 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 106210 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 106269 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106270 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 106329 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106330 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 106389 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 435 ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 106390 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaa 106449 Query: 436 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 495 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 106450 aataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 106509 Query: 496 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106510 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106562
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 856 bits (432), Expect = 0.0 Identities = 509/535 (95%), Gaps = 16/535 (2%) Strand = Plus / Minus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 134451 tgagctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatga 134396 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 134395 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 134341 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 134340 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 134281 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 134280 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 134221 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134220 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 134161 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134160 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 134101 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134100 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 134041 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134040 aaa-------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 133988 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133987 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 133933 Score = 856 bits (432), Expect = 0.0 Identities = 509/535 (95%), Gaps = 16/535 (2%) Strand = Plus / Plus Query: 14 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 73 |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 105831 tgagctcccaagcagtgggaggagaaa----tctctgaccgcgtgcctgttgaagaatga 105886 Query: 74 gccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcga 133 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 105887 gccggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcga 105941 Query: 134 aagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcc 193 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 105942 aagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatcc 106001 Query: 194 atgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaaga 253 |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| Sbjct: 106002 atgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaga 106061 Query: 254 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106062 atcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttc 106121 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106122 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 106181 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106182 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatccc 106241 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106242 aaa-------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 106294 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106295 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 106349
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 620 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 674 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 734 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 794 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 914 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 915 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 974 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 975 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1034 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 1035 taaatgaccgctcagtgataaag 1057
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 132377 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 132323 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132322 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 132263 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 132262 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 132203 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132202 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 132143 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 132142 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 132083 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 132082 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132023 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132022 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 131963 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 131962 taaatgaccgctcagtgataaag 131940 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 104387 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 104441 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104442 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 104501 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 104502 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 104561 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104562 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104621 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104622 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104681 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 104682 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 104741 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104742 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104801 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 104802 taaatgaccgctcagtgataaag 104824
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 131246 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 131192 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131191 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 131132 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131131 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 131072 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131071 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 131012 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 131011 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 130952 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130951 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 130892 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130891 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 130832 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 130831 taaatgaccgctcagtgataaag 130809 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| | ||||| |||||||||||| Sbjct: 104148 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcacagggcaattgtcactgct 104202 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104203 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 104262 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104263 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 104322 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104323 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 104382 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 | ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 104383 tagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 104442 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 104443 gcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgaga 104502 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104503 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 104562 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 104563 taaatgaccgctcagtgataaag 104585
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 133338 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 133284 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133283 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 133224 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 133223 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 133164 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133163 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 133104 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 133103 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 133044 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 133043 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 132984 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132983 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 132924 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 132923 taaatgaccgctcagtgataaag 132901 Score = 854 bits (431), Expect = 0.0 Identities = 485/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 105311 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 105365 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105366 tatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaagt 105425 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 105426 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaat 105485 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105486 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 105545 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 105546 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 105605 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 105606 gcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgaga 105665 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105666 cggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 105725 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 105726 taaatgaccgctcagtgataaag 105748
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 848 bits (428), Expect = 0.0 Identities = 486/504 (96%), Gaps = 6/504 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 1116 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 1170 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1171 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 1230 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1231 gagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 1290 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1291 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 1350 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 1351 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 1410 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1411 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 1470 Query: 466 cgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 524 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1471 cgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1530 Query: 525 ctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||| Sbjct: 1531 ctaaatgaccgctcagtgataaag 1554
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 846 bits (427), Expect = 0.0 Identities = 484/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 567 ctctgaacgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaag 626 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 627 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 681 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 682 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 741 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 801 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 861 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 862 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 921 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 922 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 981 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 982 cgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1041 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 1042 taaatgaccgctcagtgataaag 1064
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 846 bits (427), Expect = 0.0 Identities = 484/503 (96%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 629 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 683 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 684 tatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaagt 743 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 744 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 803 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 804 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 863 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 864 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 923 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 924 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 983 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 984 caatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1043 Query: 526 taaatgaccgctcagtgataaag 548 |||||||||||||| |||||||| Sbjct: 1044 taaatgaccgctcaatgataaag 1066
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 841 bits (424), Expect = 0.0 Identities = 511/535 (95%), Gaps = 10/535 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 2301 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 2358 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2359 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 2413 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2414 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 2473 Query: 196 gaccaggatgaagcttggatgaaactaagcagagg-tccgaaccgactgatgttgaagaa 254 |||||||||||||||||| |||||||||| |||| |||||||||||||||||||||||| Sbjct: 2474 gaccaggatgaagcttgggtgaaactaagtggagggtccgaaccgactgatgttgaagaa 2533 Query: 255 tcagcggatgagttgtggttaggggtgaaatg-ccactcgaacccagagctagctggttc 313 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2534 tcagcggatgagttgtggttaggggtgaaatggccactcgaacccagagctagctggttc 2593 Query: 314 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2594 tccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttc 2653 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccca 433 ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 2654 ggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgactc- 2712 Query: 434 aaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2713 aaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgaga 2772 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2773 gggaaacagtccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 2827
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 831 bits (419), Expect = 0.0 Identities = 482/503 (95%), Gaps = 5/503 (0%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 129909 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 129855 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129854 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 129795 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129794 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 129735 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129734 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 129675 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 129674 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 129615 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 129614 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 129555 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129554 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 129495 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 129494 taaatgaccgctcagtgataaag 129472 Score = 831 bits (419), Expect = 0.0 Identities = 482/503 (95%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 102547 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 102601 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102602 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 102661 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102662 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 102721 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102722 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 102781 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 102782 cggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 102841 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||| Sbjct: 102842 gcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgaga 102901 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102902 cgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcccc 102961 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 102962 taaatgaccgctcagtgataaag 102984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 130003 agctcccaagcagtgggagg 129984 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 102453 agctcccaagcagtgggagg 102472
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 813 bits (410), Expect = 0.0 Identities = 481/503 (95%), Gaps = 5/503 (0%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||| ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaac 639 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||||||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 gg----gaacccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 935 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 936 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 995 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 1055 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 1056 taaatgaccgctcagtgataaag 1078 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 811 bits (409), Expect = 0.0 Identities = 479/503 (95%), Gaps = 12/503 (2%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 106 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 160 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 161 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 220 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 221 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 280 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 281 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 340 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 341 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 400 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 401 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 453 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 513 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 514 taaatgaccgctcagtgataaag 536
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 811 bits (409), Expect = 0.0 Identities = 479/503 (95%), Gaps = 12/503 (2%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 139739 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 139685 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139684 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 139625 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139624 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 139565 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 139564 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 139505 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 139504 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 139445 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 139444 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 139392 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139391 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 139332 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 139331 taaatgaccgctcagtgataaag 139309 Score = 811 bits (409), Expect = 0.0 Identities = 479/503 (95%), Gaps = 12/503 (2%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 110321 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 110375 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110376 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 110435 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110436 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 110495 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110496 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 110555 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 110556 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 110615 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 110616 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 110668 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110669 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 110728 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 110729 taaatgaccgctcagtgataaag 110751
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 803 bits (405), Expect = 0.0 Identities = 478/503 (95%), Gaps = 12/503 (2%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 122 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 176 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 236 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 296 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 297 gccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 356 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 357 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 416 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||| || || |||| ||||||||||||||||||||| Sbjct: 417 gcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgaga 469 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 529 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 530 taaatgaccgctcagtgataaag 552
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 801 bits (404), Expect = 0.0 Identities = 481/504 (95%), Gaps = 7/504 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 106 ggaacggaacccaccgga-gccgtagcgaaagcgagtcttaatagggcgattgtcactgc 164 ||||| |||||||| ||||||||||||||||||||| |||||| ||||||||||| Sbjct: 640 ggaac-----ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 694 Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 754 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 814 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 874 Query: 345 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 875 ctggacatctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 934 Query: 405 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 464 |||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 935 ggcaaactctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgag 994 Query: 465 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 524 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 995 acgatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggccc 1054 Query: 525 ctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||| Sbjct: 1055 ctaaatgaccgctcagtgataaag 1078 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 801 bits (404), Expect = 0.0 Identities = 481/504 (95%), Gaps = 7/504 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 177465 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 177519 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177520 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 177579 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177580 ggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaat 177638 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177639 gccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 177698 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| Sbjct: 177699 tggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcgag 177758 Query: 406 gcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtgag 464 |||||||||||||||||||||||||| ||||||| | |||| |||||||||| |||||| Sbjct: 177759 gcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtgag 177818 Query: 465 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 524 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 177819 acgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggccc 177878 Query: 525 ctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||| Sbjct: 177879 ctaaatgaccgctcagtgataaag 177902 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 519 aggcccctaaatgaccgctcag 540 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 799 bits (403), Expect = 0.0 Identities = 503/534 (94%), Gaps = 8/534 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 52153 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 52096 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 52095 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 52041 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 52040 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 51981 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 51980 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 51921 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51920 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 51861 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 51860 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 51801 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaa 434 ||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 51800 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctac 51741 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51740 aaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 51681 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 51680 ggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaag 51627 Score = 799 bits (403), Expect = 0.0 Identities = 503/534 (94%), Gaps = 8/534 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 37675 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 37732 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 37733 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 37787 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 37788 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 37847 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 37848 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 37907 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37908 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 37967 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 37968 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 38027 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaa 434 ||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 38028 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctac 38087 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38088 aaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 38147 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 38148 ggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaag 38201
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 799 bits (403), Expect = 0.0 Identities = 479/503 (95%), Gaps = 6/503 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||| ||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 640 ggaac-----ccaacggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 694 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 695 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 754 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 814 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 874 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 875 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 934 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 935 gcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgaga 994 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 995 ccatgggggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccc 1054 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 1055 taaatgaccgctcagtgataaag 1077 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 799 bits (403), Expect = 0.0 Identities = 503/534 (94%), Gaps = 8/534 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 4603 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 4660 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||| Sbjct: 4661 cggcgactcataggcagcggcttggttaagggaac-----ccaccggagccatagcgaaa 4715 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 |||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4716 gcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 4775 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 4776 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 4835 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4836 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 4895 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 4896 cccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcag 4955 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-atatgacccaa 434 ||||||| | | ||||||||||||||||| |||||||||||||||||| |||||||| | Sbjct: 4956 tgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctac 5015 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5016 aaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 5075 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 5076 ggaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaag 5129
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 795 bits (401), Expect = 0.0 Identities = 452/469 (96%), Gaps = 5/469 (1%) Strand = Plus / Plus Query: 80 gactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcga 139 ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccggagccgtagcgaaagcga 646 Query: 140 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 199 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgacc 706 Query: 200 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 259 |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 707 aggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagc 766 Query: 260 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 826 Query: 320 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 379 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 827 aaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcg 886 Query: 380 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaata 439 ||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 887 ggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaata 946 Query: 440 acaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 499 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 acaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaa 1006 Query: 500 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1007 cagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 1055 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 785 bits (396), Expect = 0.0 Identities = 478/504 (94%), Gaps = 6/504 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||| |||||||||||||| || ||||| | |||||||||||| Sbjct: 620 ggaac-----ccaccggagccatagcgaaagcgagtattcataggactattgtcactgct 674 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 675 tatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaagt 734 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 794 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 854 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 855 tggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcgaa 914 Query: 406 gcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtgag 464 |||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| Sbjct: 915 gcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtgag 974 Query: 465 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 524 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 975 acgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 1034 Query: 525 ctaaatgaccgctcagtgataaag 548 |||| ||| ||||||||||||||| Sbjct: 1035 ctaattgatcgctcagtgataaag 1058
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 781 bits (394), Expect = 0.0 Identities = 427/438 (97%) Strand = Plus / Plus Query: 111 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 170 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 602 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 661 Query: 171 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 230 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 662 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 721 Query: 231 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 781 Query: 291 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 841 Query: 351 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 410 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 842 atctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaa 901 Query: 411 ctctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatg 470 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 902 ctctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatg 961 Query: 471 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 962 ggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaat 1021 Query: 531 gaccgctcagtgataaag 548 |||||| ||||||||||| Sbjct: 1022 gaccgcccagtgataaag 1039
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 777 bits (392), Expect = 0.0 Identities = 475/503 (94%), Gaps = 11/503 (2%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 641 ggaac-----ccaccggagccgtagcgaaagcgagtcttcgtagggcaattgtcactgct 695 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 696 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 755 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 756 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 815 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 816 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 875 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||| Sbjct: 876 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgag 935 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| Sbjct: 936 gcaaactctgaatactagatatgacc------tcacaggggttaaggtcggccaatgaga 989 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 990 cgatgggggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccc 1049 Query: 526 taaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| Sbjct: 1050 taaatgaccgctcagtgataaag 1072 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggagg 35 |||||||||||||||||||| Sbjct: 540 agctcccaagcagtgggagg 559
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 775 bits (391), Expect = 0.0 Identities = 501/535 (93%), Gaps = 7/535 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 592 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 593 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 647 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 648 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctatccat 707 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 708 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 767 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 827 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 828 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 887 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 888 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccc 947 Query: 435 aaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||||||||| | |||||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 948 aaataacaggggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaaga 1007 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1008 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaag 1062
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 753 bits (380), Expect = 0.0 Identities = 495/530 (93%), Gaps = 10/530 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 86796 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 86855 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 86856 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 86910 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86911 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86970 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86971 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 87030 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87031 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 87090 Query: 316 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 374 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 87091 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 87150 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 || ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 87151 gtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc-- 87207 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 ||||| |||||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 87208 -aataaaaggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagag 87266 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgat 544 || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 87267 gggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgat 87316
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 747 bits (377), Expect = 0.0 Identities = 422/437 (96%), Gaps = 5/437 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 46878 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 46932 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46933 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 46992 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46993 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 47052 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47053 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 47112 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 47113 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 47172 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 47173 gcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgaga 47232 Query: 466 cgatgggggataagctt 482 ||||||||||||||||| Sbjct: 47233 cgatgggggataagctt 47249
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 745 bits (376), Expect = 0.0 Identities = 497/533 (93%), Gaps = 12/533 (2%) Strand = Plus / Minus Query: 17 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 76 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 146025 gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagcc 145966 Query: 77 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 136 ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 145965 ggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaag 145911 Query: 137 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 196 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145910 cgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 145851 Query: 197 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 256 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 145850 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 145791 Query: 257 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 316 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 145790 agcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctcc 145731 Query: 317 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 145730 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 145671 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccca 433 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 145670 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 145611 Query: 434 a---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 489 | ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 145610 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 145551 Query: 490 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 542 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145550 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 145498 Score = 745 bits (376), Expect = 0.0 Identities = 497/533 (93%), Gaps = 12/533 (2%) Strand = Plus / Plus Query: 17 gctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagcc 76 ||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 112437 gctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaagaatgagcc 112496 Query: 77 ggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaag 136 ||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 112497 ggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaag 112551 Query: 137 cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatg 196 |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112552 cgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccatg 112611 Query: 197 accaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatc 256 ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| Sbjct: 112612 accaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaatc 112671 Query: 257 agcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcc 316 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 112672 agcggatgagttgtggttaggggtgaaatgccaatcgaacccagagctagctggttctcc 112731 Query: 317 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 375 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 112732 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 112791 Query: 376 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga--ccca 433 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 112792 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 112851 Query: 434 a---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 489 | ||| |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 112852 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 112911 Query: 490 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 542 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112912 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtg 112964
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 743 bits (375), Expect = 0.0 Identities = 433/451 (96%), Gaps = 6/451 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 106 ggaacggaacccaccggagccgtagcgaaag-cgagtcttaatagggcgattgtcactgc 164 ||||| ||||||||||||||||||||| |||||||| ||||||| ||||||||||| Sbjct: 364803 ggaac-----ccaccggagccgtagcgaaaggcgagtcttcatagggcaattgtcactgc 364857 Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 364858 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 364917 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 364918 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 364977 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364978 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 365037 Query: 345 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 404 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 365038 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 365097 Query: 405 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 464 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 365098 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 365157 Query: 465 acgatgggggataagcttcatcgtcgagagg 495 ||| ||||||||||||||||||||||||||| Sbjct: 365158 acggtgggggataagcttcatcgtcgagagg 365188 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 490 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaag 129289 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 743 bits (375), Expect = 0.0 Identities = 497/535 (92%), Gaps = 7/535 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 117616 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 117557 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 117556 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 117502 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 117501 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccat 117442 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 117441 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 117382 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117381 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 117322 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117321 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 117262 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 117261 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccc 117202 Query: 435 aaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||| | ||||| | |||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 117201 aaataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaaga 117142 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 117141 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaag 117087 Score = 743 bits (375), Expect = 0.0 Identities = 497/535 (92%), Gaps = 7/535 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 90486 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 90545 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 90546 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 90600 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 90601 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccat 90660 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 90661 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 90720 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90721 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 90780 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 90781 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 90840 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 90841 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccc 90900 Query: 435 aaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||| | ||||| | |||| ||||||||||| ||||||||||||||||||||| ||| Sbjct: 90901 aaataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaaga 90960 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 90961 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaag 91015
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 735 bits (371), Expect = 0.0 Identities = 496/535 (92%), Gaps = 7/535 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 533 agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 592 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| ||||| |||||| |||||||||| || |||||||||||||||||||| Sbjct: 593 cggcgacttataggtagtggcctggttaaggggac-----ccaccggagccgtagcgaaa 647 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| | |||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 648 gcgagtcttcctggggcaattgtcactacttatggacccgaacctgggtgatctatccat 707 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 ||||||||||||||| || |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 708 gaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 767 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 827 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 828 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 887 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 888 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcc 947 Query: 435 aaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 |||||| |||| | | |||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 948 gaataacgggggataagggtcaaccagtgagacggtgggggataagcttcatcgtcgaga 1007 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1008 gggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaag 1062
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 728 bits (367), Expect = 0.0 Identities = 492/530 (92%), Gaps = 9/530 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 88882 agctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttgaagaatgagc 88941 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||||||||||||||||| |||||||||||||||||| | Sbjct: 88942 cggcgacttataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaga 88996 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 88997 gcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 89056 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 89057 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 89116 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89117 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 89176 Query: 316 cccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcg 374 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89177 cccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcg 89236 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 || ||||| || |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 89237 gtacgggccacgagagcggtaccaaatcgaggcaaactctgaatactagat-taccccaa 89295 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 | || ||||| | |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 89296 ta--aaagggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagag 89353 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgat 544 || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 89354 gggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgat 89403
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 720 bits (363), Expect = 0.0 Identities = 444/467 (95%), Gaps = 8/467 (1%) Strand = Plus / Plus Query: 86 taggcagtggcttggttaa-gggaacggaacccaccggagccgtagcgaaagcgagtctt 144 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaaccgtagcgaaagcgagtctt 668 Query: 145 aatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccagg 202 ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 669 catagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccagg 728 Query: 203 atgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgga 262 ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 729 atgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgga 788 Query: 263 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-gaa 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 789 tgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccgaa 848 Query: 322 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 849 atgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcggg 908 Query: 382 ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataac 441 | ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 909 ccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataac 968 Query: 442 aggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaaca 501 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 969 aagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaaca 1028 Query: 502 gcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||| ||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1029 gccctgatcacccgctaaggcccctaaatgatcgctcagtgataaag 1075
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 710 bits (358), Expect = 0.0 Identities = 491/534 (91%), Gaps = 6/534 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| Sbjct: 127908 agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagc 127849 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 127848 cggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 127794 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 127793 gcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccat 127734 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| Sbjct: 127733 gaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaat 127674 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127673 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 127614 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 127613 cccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcg 127554 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127553 gtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgaccccc 127494 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 || ||| ||| | |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 127493 gaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagag 127434 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 || |||||||| ||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 127433 gggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaag 127380 Score = 710 bits (358), Expect = 0.0 Identities = 491/534 (91%), Gaps = 6/534 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| ||||||||||||| |||||||||| |||||||| Sbjct: 95539 agctcccaagcagtgggaggagaattggatctctgaccgcatgcctgttgaggaatgagc 95598 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 95599 cggcgactcataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 95653 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95654 gcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtgatctatccat 95713 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| Sbjct: 95714 gaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgatgttgaaaaat 95773 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95774 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 95833 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 |||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||| Sbjct: 95834 cccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcg 95893 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95894 gtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgaccccc 95953 Query: 435 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 494 || ||| ||| | |||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 95954 gaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagag 96013 Query: 495 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 || |||||||| ||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 96014 gggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaag 96067
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 696 bits (351), Expect = 0.0 Identities = 491/535 (91%), Gaps = 7/535 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 537 agctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 596 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| ||||||||||||| |||||||||||||||||||| Sbjct: 597 cggcgacttataggcagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 651 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 || |||||| | |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 652 gcaagtcttcctggggcaattgtcactgcttatggacccgaacctgggtgatctatccat 711 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 712 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 771 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 772 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 831 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 832 cccgaaatgcgttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcg 891 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 892 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactggataggactccc 951 Query: 435 aaataacag-gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 493 ||||| || | || | |||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 952 taataatagagagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgaga 1011 Query: 494 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||| |||||||| ||||||| ||||||||||||||||||||||| |||| ||||| Sbjct: 1012 ggggaacagcccagatcaccggctaaggcccctaaatgaccgctaagtggtaaag 1066
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 628 bits (317), Expect = e-177 Identities = 387/409 (94%), Gaps = 6/409 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 115678 agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagc 115619 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 115618 cggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaa 115564 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115563 gcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 115504 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 115503 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 115444 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115443 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 115384 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 115383 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 115324 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115323 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 628 bits (317), Expect = e-177 Identities = 387/409 (94%), Gaps = 6/409 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 86442 agctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaagaatgagc 86501 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| ||||||||||| | |||||||||||||||||||| Sbjct: 86502 cggcgacttataggcagtggcctggttaagggagc-----ccaccggagccgtagcgaaa 86556 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86557 gcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 86616 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 86617 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 86676 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86677 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 86736 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86737 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 86796 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 |||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86797 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Minus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaag 115149 Score = 139 bits (70), Expect = 1e-29 Identities = 91/98 (92%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaag 86971
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 4851 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 4905 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4906 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 4965 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 4966 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5025 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5026 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5085 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5086 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5145 Query: 406 gcaaactctgaatactagatat 427 |||||||||||||||||||||| Sbjct: 5146 gcaaactctgaatactagatat 5167 Score = 176 bits (89), Expect = 5e-41 Identities = 95/97 (97%) Strand = Plus / Plus Query: 452 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 512 ccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||| ||||||||||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaag 5278
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 622 bits (314), Expect = e-175 Identities = 365/382 (95%), Gaps = 5/382 (1%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 23074 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 23020 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23019 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaagt 22960 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 22959 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 22900 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22899 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 22840 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 22839 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 22780 Query: 406 gcaaactctgaatactagatat 427 |||||||||||||||||||||| Sbjct: 22779 gcaaactctgaatactagatat 22758 Score = 176 bits (89), Expect = 5e-41 Identities = 95/97 (97%) Strand = Plus / Minus Query: 452 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 512 ccagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||| ||||||||||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaag 22647
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 406 gcaaactctgaatactagatatgaccc 432 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 178 bits (90), Expect = 1e-41 Identities = 103/106 (97%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 444 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 502 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 503 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaag 5550
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 617 bits (311), Expect = e-173 Identities = 368/387 (95%), Gaps = 5/387 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 5119 ggaaa-----ccaccggagccgtagcgaaagcgagtcttcatagggctattgtcactgct 5173 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5174 tatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaagt 5233 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 5234 ggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaat 5293 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5294 gccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 5353 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 |||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||| Sbjct: 5354 tggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcgag 5413 Query: 406 gcaaactctgaatactagatatgaccc 432 ||||||||||||||||||||||||||| Sbjct: 5414 gcaaactctgaatactagatatgaccc 5440 Score = 178 bits (90), Expect = 1e-41 Identities = 103/106 (97%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 444 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 502 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 503 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaag 5550
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 615 bits (310), Expect = e-173 Identities = 389/414 (93%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 4422 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 4481 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 4482 cggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaa 4536 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 4537 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 4596 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 4597 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 4656 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4657 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 4716 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4717 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 4776 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4777 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaag 4955
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 615 bits (310), Expect = e-173 Identities = 389/414 (93%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 532 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 591 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 592 cggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaa 646 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 706 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 707 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 766 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 826 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 827 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 886 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 887 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaag 1065
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 615 bits (310), Expect = e-173 Identities = 389/414 (93%), Gaps = 6/414 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 150713 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 150654 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 150653 cggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaa 150599 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 150598 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 150539 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 150538 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 150479 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150478 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 150419 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 150418 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 150359 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150358 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 615 bits (310), Expect = e-173 Identities = 389/414 (93%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 117953 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 118012 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 118013 cggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaa 118067 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 118068 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 118127 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 118128 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 118187 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118188 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 118247 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 118248 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 118307 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118308 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Minus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaag 150180 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaag 118486
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 615 bits (310), Expect = e-173 Identities = 389/414 (93%), Gaps = 6/414 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||| |||||||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 532 agcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 591 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| |||||||||||| ||||||||||||||||||| Sbjct: 592 cggcgacttataggcagtggcctggttaagggaatt-----caccggagccgtagcgaaa 646 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 647 gcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 706 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 707 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 766 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 826 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 827 cccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcg 886 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 |||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 887 gtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940 Score = 155 bits (78), Expect = 2e-34 Identities = 93/98 (94%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 511 accagctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||| ||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaag 1065
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 605 bits (305), Expect = e-170 Identities = 387/412 (93%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 516 agcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaagaatgagc 575 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||||||||| |||||||||||| | | ||||||||||| |||||||| Sbjct: 576 cggcgacttataggcagtggcctggttaagggaaagaa--ccaccggagccatagcgaaa 633 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 634 gcgagtcttcccagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 693 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| Sbjct: 694 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaat 753 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 813 Query: 316 cccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcg 374 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 814 cccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcg 873 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 426 |||||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 874 gtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||||||||||||||| |||| Sbjct: 1015 taaggcccctaaatgaccgctaagtg 1040
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 589 bits (297), Expect = e-165 Identities = 336/349 (96%), Gaps = 5/349 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 150 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 204 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 205 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 264 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 324 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 325 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttgac 384 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 394 ||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 385 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 585 bits (295), Expect = e-164 Identities = 473/530 (89%), Gaps = 8/530 (1%) Strand = Plus / Minus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 138735 agctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagc 138676 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||| | ||| ||||||||||||| |||||||||||||||||||| Sbjct: 138675 cggcgacttataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaa 138621 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||| | |||| ||||||||||||||||||| ||||||||||||||| Sbjct: 138620 gcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccat 138561 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||||| ||| | | ||||||||||||||||||||||||| ||| Sbjct: 138560 gaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaat 138501 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 138500 cagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctc 138441 Query: 316 cccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||| ||||||| || | || | |||||||||||||| || Sbjct: 138440 cccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacg 138381 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||| |||||||| |||||||||||||||||||| | |||| ||| | Sbjct: 138380 gtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggcccca 138321 Query: 435 aaataaca--ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 492 | | ||| |||| ||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 138320 gagtcacacgagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgag 138261 Query: 493 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 542 |||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 138260 aggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtg 138211 Score = 585 bits (295), Expect = e-164 Identities = 473/530 (89%), Gaps = 8/530 (1%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 83142 agctcccgagcagtgggaggagaattggatctctgaccgcgtgcctgttgaagaatgagc 83201 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| |||||| | ||| ||||||||||||| |||||||||||||||||||| Sbjct: 83202 cggcgacttataggcggcggcctggttaagggaac-----ccaccggagccgtagcgaaa 83256 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||| | |||| ||||||||||||||||||| ||||||||||||||| Sbjct: 83257 gcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtgatctatccat 83316 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||||| ||| | | ||||||||||||||||||||||||| ||| Sbjct: 83317 gaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgatgttgaaaaat 83376 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 83377 cagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagctagctggttctc 83436 Query: 316 cccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaaagcactgtttcg 374 ||||||||||||||||||||||| ||||||| || | || | |||||||||||||| || Sbjct: 83437 cccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacg 83496 Query: 375 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaa 434 |||||||||||| |||| |||||||| |||||||||||||||||||| | |||| ||| | Sbjct: 83497 gtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggcccca 83556 Query: 435 aaataaca--ggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 492 | | ||| |||| ||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 83557 gagtcacacgagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgag 83616 Query: 493 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtg 542 |||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 83617 aggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtg 83666
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 573 bits (289), Expect = e-160 Identities = 454/505 (89%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 | |||| ||||||||| | |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 626 g----ggaa-ccaccggagtcatagcgaaagcaagtcttcatagggcaaatgtcattgct 680 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 681 tatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaagt 740 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 800 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| || Sbjct: 801 gccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-ac 859 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| ||| Sbjct: 860 cagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattgag 919 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| ||||||||||||||||| ||||||||||||||| | ||||| | ||||||| Sbjct: 920 gcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtga 979 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 980 gaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggcc 1039 Query: 524 cctaaatgaccgctcagtgataaag 548 |||||||||||||| ||| |||||| Sbjct: 1040 cctaaatgaccgctaagttataaag 1064
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 569 bits (287), Expect = e-159 Identities = 323/335 (96%), Gaps = 5/335 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 146 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 200 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 201 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 260 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 320 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 321 gccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttgac 380 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgg 380 ||||||||||||||||||||||||||||||||||| Sbjct: 381 tggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 567 bits (286), Expect = e-158 Identities = 313/323 (96%), Gaps = 8/323 (2%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 75174 gtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcct 75123 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 75122 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 75063 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75062 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 75003 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75002 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 74943 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74942 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 74883 Query: 302 gctagctggttctccccgaaatg 324 ||||||||||||||||||||||| Sbjct: 74882 gctagctggttctccccgaaatg 74860 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 567 bits (286), Expect = e-158 Identities = 313/323 (96%), Gaps = 8/323 (2%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 382364 gtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcct 382415 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 382416 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 382475 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 382476 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 382535 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382536 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 382595 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382596 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 382655 Query: 302 gctagctggttctccccgaaatg 324 ||||||||||||||||||||||| Sbjct: 382656 gctagctggttctccccgaaatg 382678 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 567 bits (286), Expect = e-158 Identities = 313/323 (96%), Gaps = 8/323 (2%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 113265 gtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcct 113214 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 113213 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 113154 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113153 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 113094 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113093 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 113034 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113033 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 112974 Query: 302 gctagctggttctccccgaaatg 324 ||||||||||||||||||||||| Sbjct: 112973 gctagctggttctccccgaaatg 112951 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 567 bits (286), Expect = e-158 Identities = 316/327 (96%), Gaps = 8/327 (2%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 367947 gtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcct 367896 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 367895 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 367836 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 367835 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 367776 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367775 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 367716 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367715 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 367656 Query: 302 gctagctggttctccccgaaatgcgtt 328 |||||||||||||||||||||| |||| Sbjct: 367655 gctagctggttctccccgaaattcgtt 367629 Score = 567 bits (286), Expect = e-158 Identities = 316/327 (96%), Gaps = 8/327 (2%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 184552 gtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgtgcct 184501 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 184500 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaatggaacccaccg 184441 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 184440 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 184381 Query: 182 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184380 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 184321 Query: 242 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184320 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 184261 Query: 302 gctagctggttctccccgaaatgcgtt 328 |||||||||||||||||||||| |||| Sbjct: 184260 gctagctggttctccccgaaattcgtt 184234 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 487 gtcgagagggaaacagcccggatc 510 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 555 bits (280), Expect = e-155 Identities = 382/412 (92%), Gaps = 3/412 (0%) Strand = Plus / Plus Query: 15 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 74 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| Sbjct: 144451 gagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgag 144510 Query: 75 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 134 ||||||||| ||||| ||||| ||||||||| | ||||| |||||||||||||||| Sbjct: 144511 ccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaa 144568 Query: 135 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 194 |||||||||| | |||| |||||||| |||||| |||||||||||||||||||||||| Sbjct: 144569 agcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatctatcca 144628 Query: 195 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 254 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 144629 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 144688 Query: 255 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144689 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 144748 Query: 315 ccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | Sbjct: 144749 ccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttcc 144808 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 425 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144809 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 555 bits (280), Expect = e-155 Identities = 382/412 (92%), Gaps = 3/412 (0%) Strand = Plus / Minus Query: 15 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 74 ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||||||||| Sbjct: 88400 gagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaagaatgag 88341 Query: 75 ccggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaa 134 ||||||||| ||||| ||||| ||||||||| | ||||| |||||||||||||||| Sbjct: 88340 ccggcgacttgtaggcggtggcccggttaagggggag-aaccc-ccggagccgtagcgaa 88283 Query: 135 agcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatcca 194 |||||||||| | |||| |||||||| |||||| |||||||||||||||||||||||| Sbjct: 88282 agcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtgatctatcca 88223 Query: 195 tgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaa 254 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| || Sbjct: 88222 tgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaaaaa 88163 Query: 255 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88162 tcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttct 88103 Query: 315 ccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttc 373 |||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| | Sbjct: 88102 ccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttcc 88043 Query: 374 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 425 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88042 ggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 87991 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||| ||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaag 144990 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Minus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||| ||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaag 87861
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 535 bits (270), Expect = e-149 Identities = 378/410 (92%), Gaps = 8/410 (1%) Strand = Plus / Minus Query: 21 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 80 ||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||| Sbjct: 6010 ccaagcagtgggaggagaatggaatctctgaccgcgtgccttttgaagaatgagccggcg 5951 Query: 81 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 140 ||| ||||||||||||||||||||||| || |||||||||||||||||| |||||| Sbjct: 5950 acttataggcagtggcttggttaagggcac-----ccaccggagccgtagcgagagcgag 5896 Query: 141 tcttaatagggcgattgtcactgctt-atggacccgaacctgggtgatctatccatgacc 199 |||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 5895 tcttcatagggcaattgtcactgctttatggacccgaacctgggtgatctatccatgacc 5836 Query: 200 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 259 ||||||||||| ||||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct: 5835 aggatgaagct-ggatgaaactaagtagaggtccgaaccgactgatgttgcaaaatcagc 5777 Query: 260 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5776 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 5717 Query: 320 aaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcggtgc 378 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 5716 aaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcggtat 5657 Query: 379 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 ||| | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5656 aggccgtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607 Score = 131 bits (66), Expect = 3e-27 Identities = 87/94 (92%) Strand = Plus / Minus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 511 accagctaaggcccctaaatgaccgctcagtgat 544 ||||| |||||||||||||||||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgat 5509
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 498 bits (251), Expect = e-137 Identities = 368/404 (91%), Gaps = 6/404 (1%) Strand = Plus / Plus Query: 21 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 80 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 537 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 596 Query: 81 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 140 ||| |||||||||||| ||||||||| | ||| || |||||||||||||||||||| Sbjct: 597 acttataggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgag 651 Query: 141 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 200 |||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| Sbjct: 652 tctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggcca 711 Query: 201 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 260 || |||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||| Sbjct: 712 gggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 771 Query: 261 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 320 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 772 gatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccga 831 Query: 321 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 379 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 832 aatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcg 891 Query: 380 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 892 ggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 511 accagctaaggcccctaaatgaccgctcagtg 542 |||||||||||||||||||||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtg 1037
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 498 bits (251), Expect = e-137 Identities = 368/404 (91%), Gaps = 6/404 (1%) Strand = Plus / Plus Query: 21 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 80 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 550 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 609 Query: 81 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 140 ||| |||||||||||| ||||||||| | ||| || |||||||||||||||||||| Sbjct: 610 acttataggcagtggcctggttaaggcga--gaagcc---ggagccgtagcgaaagcgag 664 Query: 141 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 200 |||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||| Sbjct: 665 tctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggcca 724 Query: 201 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 260 || |||||||||| |||| | ||| ||||||||||||||||||||||||| |||||||| Sbjct: 725 gggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcg 784 Query: 261 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 320 |||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct: 785 gatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccga 844 Query: 321 aatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcg 379 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 845 aatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgcg 904 Query: 380 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 905 ggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 143 bits (72), Expect = 7e-31 Identities = 87/92 (94%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 511 accagctaaggcccctaaatgaccgctcagtg 542 |||||||||||||||||||||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtg 1050
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 494 bits (249), Expect = e-136 Identities = 369/405 (91%), Gaps = 8/405 (1%) Strand = Plus / Plus Query: 21 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 80 ||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 654 ccaagcagtgggaggagaatggaatctctgaccgcgtgcctgttgaagaatgagccggcg 713 Query: 81 actcataggcagtggcttggttaagggaacg-gaacccaccggagccgtagcgaaagcga 139 ||| |||||||||||| ||||||||| || ||| || ||||||||||||||||||| Sbjct: 714 acttataggcagtggcctggttaagg---cgtgaagcc---ggagccgtagcgaaagcga 767 Query: 140 gtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacc 199 ||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| || Sbjct: 768 gtctttctagggcgaatgtcactgcttatggacccgaacccgggtgatctaaccatggcc 827 Query: 200 aggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagc 259 ||| |||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||| Sbjct: 828 agggtgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagc 887 Query: 260 ggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccg 319 ||||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 888 ggatgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccg 947 Query: 320 aaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgc 378 ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 948 aaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcggtgc 1007 Query: 379 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 |||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1008 gggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 451 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 510 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 511 accagctaaggcccctaaatgaccgctcagtg 542 |||||||||||||||||||||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtg 1154
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 494 bits (249), Expect = e-136 Identities = 300/316 (94%), Gaps = 7/316 (2%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| | || | |||||||||||||||||||||||||||||| Sbjct: 507 agctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagc 564 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 565 cggcgactcataggcagtggcttggttaagggaac-----ccaccggagccgtagcgaaa 619 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 620 gcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccat 679 Query: 196 gaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaat 255 |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 680 gaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaat 739 Query: 256 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 cagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctc 799 Query: 316 cccgaaatgcgttgag 331 |||||||||||||||| Sbjct: 800 cccgaaatgcgttgag 815
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 482 bits (243), Expect = e-133 Identities = 365/403 (90%), Gaps = 7/403 (1%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 540 caagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcga 599 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || |||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 600 cttataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaaagcgagt 654 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 || || |||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 655 ct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccag 713 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| |||||| ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 714 gatgaagcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcgg 773 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||| Sbjct: 774 atgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaa 833 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 ||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||||| Sbjct: 834 atgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgg 893 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 894 gctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 936 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 516 ctaaggcccctaaatgaccgctcagtg 542 ||||||||||||||||||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtg 1039
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 740 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 348 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 349 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 408 aaactctgaatactagatatg 428 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 516 ctaaggcccctaaat 530 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 478 bits (241), Expect = e-131 Identities = 348/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 3661 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 3714 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || Sbjct: 3715 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtgga 3774 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 3775 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 3834 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 348 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 3835 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 3894 Query: 349 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 3895 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 3954 Query: 408 aaactctgaatactagatatg 428 ||||||||||||||| ||||| Sbjct: 3955 aaactctgaatactaaatatg 3975 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 516 ctaaggcccctaaat 530 |||||||||||||| Sbjct: 4045 ttaaggcccctaaat 4059
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 476 bits (240), Expect = e-131 Identities = 351/385 (91%), Gaps = 6/385 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 | |||| ||||||||||| |||||||||| |||||| ||||||| | ||||| |||| Sbjct: 639 g----ggaa-ccaccggagccatagcgaaagcaagtcttcatagggcaaatgtcattgct 693 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 694 tatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaagt 753 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 ggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 813 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| || Sbjct: 814 gccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-ac 872 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct: 873 cggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattgag 932 Query: 406 gcaaactctgaatactagatatgac 430 ||||||| ||||||||||||||||| Sbjct: 933 gcaaactatgaatactagatatgac 957 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 455 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 514 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 515 gctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||||| ||| |||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaag 1093
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 470 bits (237), Expect = e-129 Identities = 347/381 (91%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | |||||| |||| |||||||||| |||||| |||||||||||||||| |||| Sbjct: 627 at-----ccaccgaagccatagcgaaagcaagtctttc-agggcgattgtcactgtttat 680 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| || Sbjct: 681 ggacccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtgga 740 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgcc 800 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgg 348 |||||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 801 actcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgg 860 Query: 349 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | || ||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 861 gctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgc 920 Query: 408 aaactctgaatactagatatg 428 ||||||||||||||| ||||| Sbjct: 921 aaactctgaatactaaatatg 941 Score = 85.7 bits (43), Expect = 1e-13 Identities = 67/75 (89%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 516 ctaaggcccctaaat 530 |||||||||||||| Sbjct: 1011 ttaaggcccctaaat 1025
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 466 bits (235), Expect = e-128 Identities = 363/403 (90%), Gaps = 7/403 (1%) Strand = Plus / Minus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 124725 caagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcga 124666 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || |||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 124665 cttataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaaagcgagt 124611 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 || || |||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 124610 ct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccag 124552 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 124551 gatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcgg 124492 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||| Sbjct: 124491 atgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaa 124432 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 ||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||||| Sbjct: 124431 atgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgg 124372 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 |||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 124371 gctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 466 bits (235), Expect = e-128 Identities = 363/403 (90%), Gaps = 7/403 (1%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95141 caagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcga 95200 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || |||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 95201 cttataggcagtggcgtggttaagggaatt-----caccggagccgtagcgaaagcgagt 95255 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 || || |||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 95256 ct-aacagggcgattgtcactgcttatggacccgaacccgggtgatctatccatggccag 95314 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| |||| | ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 95315 gatgaagcttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcgg 95374 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| |||||||| ||| |||||| | |||||||||||||||||||||| Sbjct: 95375 atgagctgtggttagcggtgaaataccaatcgaactcggagctagctggttctccccgaa 95434 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 ||||||||||||||||| ||| | ||| | |||||||||||||||||||||||||||| Sbjct: 95435 atgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcggtgcgg 95494 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 423 |||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 95495 gctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 95537 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Minus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 516 ctaaggcccctaaatgaccgctcagtg 542 ||||||||||||||||||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtg 124226 Score = 133 bits (67), Expect = 7e-28 Identities = 82/87 (94%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 516 ctaaggcccctaaatgaccgctcagtg 542 ||||||||||||||||||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtg 95640
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 448 bits (226), Expect = e-123 Identities = 320/350 (91%), Gaps = 1/350 (0%) Strand = Plus / Minus Query: 199 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 258 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 259 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 318 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 319 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 378 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 379 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 438 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 439 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 498 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 499 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 ||| || |||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaag 2763 Score = 157 bits (79), Expect = 5e-35 Identities = 121/135 (89%), Gaps = 5/135 (3%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 |||||||||||||||| ||||||||||||||| ||| |||| ||| |||||||| Sbjct: 3189 -----ggaacccaccggagccatagcgaaagcgagtcagaatggggcaattctcactgct 3135 Query: 166 tatggacccgaacct 180 ||||||||||||||| Sbjct: 3134 tatggacccgaacct 3120
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 446 bits (225), Expect = e-122 Identities = 359/401 (89%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 4584 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 4643 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 |||||||||||||||||||||||||||| | || ||||||||| |||||||||| ||| Sbjct: 4644 ctcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagt 4702 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 4703 ctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 4762 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 4763 gatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgg 4822 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 4823 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 4882 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||| Sbjct: 4883 atgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgg 4942 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||| || || |||||||||||||||||||||||||||||| Sbjct: 4943 gctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 519 aggcccctaaatgaccgctcagtgataaag 548 ||||||||||||| ||||| |||| ||||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaag 5094
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 446 bits (225), Expect = e-122 Identities = 359/401 (89%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 551 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 610 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 |||||||||||||||||||||||||||| | || ||||||||| |||||||||| ||| Sbjct: 611 ctcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagt 669 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 670 ctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 729 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 730 gatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgg 789 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 790 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 849 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||| Sbjct: 850 atgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgg 909 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||| || || |||||||||||||||||||||||||||||| Sbjct: 910 gctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 519 aggcccctaaatgaccgctcagtgataaag 548 ||||||||||||| ||||| |||| ||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaag 1061
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 446 bits (225), Expect = e-122 Identities = 359/401 (89%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 551 caagcagtgggaggagaattgtatctttgaccgcgtgcctgttgaagaatgagccggcga 610 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 |||||||||||||||||||||||||||| | || ||||||||| |||||||||| ||| Sbjct: 611 ctcataggcagtggcttggttaagggaaattatcc-accggagccatagcgaaagcaagt 669 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||| |||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 670 ctttttagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 729 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| | |||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 730 gatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgttgaaaaatcggcgg 789 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 790 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 849 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 |||||||||||||||||| || |||| || ||| |||||||||||||||||||||||||| Sbjct: 850 atgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcggtgcgg 909 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 ||| || || |||||||||||||||||||||||||||||| Sbjct: 910 gctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 519 aggcccctaaatgaccgctcagtgataaag 548 ||||||||||||| ||||| |||| ||||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaag 1061
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 424 bits (214), Expect = e-115 Identities = 360/406 (88%), Gaps = 2/406 (0%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 ||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 546 caagcagtgggagaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcga 605 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 ||||||| ||||||| ||||||||||| | | || |||||| |||||||||| ||| Sbjct: 606 ctcatagatagtggctgggttaagggaatttatgc-actggagccatagcgaaagcaagt 664 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||| ||||| |||||||||| |||||||||||||| |||||||||| ||||| |||| Sbjct: 665 cttttcagggctattgtcactgtctatggacccgaacccgggtgatctaaccatggccag 724 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||||| |||||||||| ||||||| ||||||| ||||||||| |||| |||| Sbjct: 725 gatgaagcttgggtgaaactaagtggaggtcccaaccgaccgatgttgaaaaatcggcgg 784 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||| ||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 785 atgagctgtggttagtggtgaaatgccactcgaactcggagctagctggttctccccgaa 844 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 |||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||||| Sbjct: 845 atgcgttgaggcgcagcaattaactggactatccaggggtaaagcactgtttcggtgcgg 904 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 426 |||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 905 gctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 107 bits (54), Expect = 4e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 519 aggcccctaaatgaccgctcagtgataaag 548 ||||||||||||| ||||| |||| ||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaag 1056
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 420 bits (212), Expect = e-114 Identities = 360/405 (88%), Gaps = 7/405 (1%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 537 caagcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcga 596 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || ||||||||||||| |||||| || || || ||||||||| |||||||||||||| Sbjct: 597 cttataggcagtggctaggttaa-ggtacaaaa---accggagccatagcgaaagcgagt 652 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||| |||| Sbjct: 653 cttaatagggcga-tgtcactgtctatagacccgaacccgggtgatctaaccatggccag 711 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||| | ||||||| || || |||||||||||| ||||||||| |||| |||| Sbjct: 712 gatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcgg 771 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct: 772 atgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaa 831 Query: 322 atgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcg 379 ||||||||||||||||| |||| | || |||||||||||||||||||||||||||| Sbjct: 832 atgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcg 891 Query: 380 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 424 ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 892 ggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||||||||| ||||| |||| Sbjct: 1012 taaggcccctaaatggccgctaagtg 1037
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 420 bits (212), Expect = e-114 Identities = 360/405 (88%), Gaps = 7/405 (1%) Strand = Plus / Minus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 115125 caagcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcga 115066 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || ||||||||||||| |||||| || || || ||||||||| |||||||||||||| Sbjct: 115065 cttataggcagtggctaggttaa-ggtacaaaa---accggagccatagcgaaagcgagt 115010 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||| |||| Sbjct: 115009 cttaatagggcga-tgtcactgtctatagacccgaacccgggtgatctaaccatggccag 114951 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||| | ||||||| || || |||||||||||| ||||||||| |||| |||| Sbjct: 114950 gatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcgg 114891 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct: 114890 atgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaa 114831 Query: 322 atgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcg 379 ||||||||||||||||| |||| | || |||||||||||||||||||||||||||| Sbjct: 114830 atgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcg 114771 Query: 380 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 424 ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114770 ggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 420 bits (212), Expect = e-114 Identities = 360/405 (88%), Gaps = 7/405 (1%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| Sbjct: 86863 caagcagtgggaggaggttttgatctctgaccgcgtgcctattgaagaatgagccggcga 86922 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || ||||||||||||| |||||| || || || ||||||||| |||||||||||||| Sbjct: 86923 cttataggcagtggctaggttaa-ggtacaaaa---accggagccatagcgaaagcgagt 86978 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 ||||||||||||| |||||||| ||| |||||||||| |||||||||| ||||| |||| Sbjct: 86979 cttaatagggcga-tgtcactgtctatagacccgaacccgggtgatctaaccatggccag 87037 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 |||||||||| | ||||||| || || |||||||||||| ||||||||| |||| |||| Sbjct: 87038 gatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgttgaaaaatcggcgg 87097 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 |||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||| Sbjct: 87098 atgagttgtggttaggggtgaaatgccaatcgaactcggagctagctggttctccccgaa 87157 Query: 322 atgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcggtgcg 379 ||||||||||||||||| |||| | || |||||||||||||||||||||||||||| Sbjct: 87158 atgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcggtgcg 87217 Query: 380 ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 424 ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87218 ggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Minus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||||||||| ||||| |||| Sbjct: 114650 taaggcccctaaatggccgctaagtg 114625 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||||||||| ||||| |||| Sbjct: 87338 taaggcccctaaatggccgctaagtg 87363
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 420 bits (212), Expect = e-114 Identities = 267/284 (94%), Gaps = 6/284 (2%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 104 |||||||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 105 gggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 164 | |||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 80 g-----ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134 Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 194 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 254 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 328 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 tgccactcgaacccagagctagctggttctccccgaaatgcgtt 298 Score = 355 bits (179), Expect = 1e-94 Identities = 197/203 (97%) Strand = Plus / Plus Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 406 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 465 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 466 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 526 taaatgaccgctcagtgataaag 548 ||||||| ||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaag 519
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1015 cctaaatgaccactaagttataaag 1039
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 414 bits (209), Expect = e-112 Identities = 434/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 406 bits (205), Expect = e-110 Identities = 433/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 601 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 655 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 656 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 715 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 ggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 775 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 776 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgtt-ac 834 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1015 cctaaatgaccactaagttataaag 1039
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 406 bits (205), Expect = e-110 Identities = 434/505 (85%), Gaps = 9/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gtt-ac 834 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 835 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 894 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 895 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 954 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 955 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1014 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1015 cctaaatgaccactaagttataaag 1039
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 406 bits (205), Expect = e-110 Identities = 433/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| || ||| || Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgtt-ac 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 402 bits (203), Expect = e-109 Identities = 358/409 (87%), Gaps = 8/409 (1%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 ||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||||| Sbjct: 944 caagcagtgggagaagaatctaatctttgaccgcgtgcctgttgaagaatgagccggcga 1003 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || ||| |||||||| |||||||||| | |||| ||||||||||||||||||| Sbjct: 1004 cttataagcagtggcctggttaagggtat-------accgaagccgtagcgaaagcgagt 1056 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 | | |||||| |||||||| ||||||||||||||| |||||||||||||||| |||| Sbjct: 1057 cattcaagggcgcatgtcactgtttatggacccgaacccgggtgatctatccatggccag 1116 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 | |||||||||| |||| | ||| |||| |||||||||||| ||||||| || |||||| Sbjct: 1117 ggtgaagcttgggtgaagccaagtggaggcccgaaccgactggtgttgaaaaaccagcgg 1176 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1177 atgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaa 1236 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 ||||||||||||||||| |||||| || | ||||||||||||||||||||||||||| Sbjct: 1237 atgcgttgaggcgcagcgattgactaaactgtttaggggtaaagcactgtttcggtgcgg 1296 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 429 |||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1297 gctgcgaaagcggtaccaaatcgaggcaaactctgaatactagacatga 1345 Score = 121 bits (61), Expect = 3e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 458 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 517 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 518 aaggcccctaaatgaccgctcagtg 542 ||||||||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtg 1442
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 400 bits (202), Expect = e-108 Identities = 358/408 (87%), Gaps = 9/408 (2%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 497 caagcagtgggaggagaatagaatctctgaccgcgtgcctgttgaagaatgagccggcga 556 Query: 82 ctcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgagt 141 || ||| | |||||| |||||||| ||| || ||||||||||||||||| ||| Sbjct: 557 cttataagtagtggcctggttaagagaat-------actggagccgtagcgaaagcaagt 609 Query: 142 cttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccag 201 | || | || || |||||||| |||| |||||||||| |||||||||||||||| |||| Sbjct: 610 catatttgg-cgcatgtcactgtttatagacccgaacccgggtgatctatccatggccag 668 Query: 202 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 261 | |||| ||||| |||| | ||| ||||||||||||||||||||||||| ||||||||| Sbjct: 669 ggtgaaacttgggtgaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcgg 728 Query: 262 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaa 321 ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 729 atgagctgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaa 788 Query: 322 atgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgg 380 ||||||||||||||||| |||| ||||| | ||||||||||||||||||||||||||| Sbjct: 789 atgcgttgaggcgcagcgattgattggactacttaggggtaaagcactgtttcggtgcgg 848 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 428 |||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 849 gctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatg 896 Score = 133 bits (67), Expect = 7e-28 Identities = 85/91 (93%) Strand = Plus / Plus Query: 458 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 517 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 518 aaggcccctaaatgaccgctcagtgataaag 548 |||||||| |||||||||||||||||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaag 1002
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 400 bits (202), Expect = e-108 Identities = 205/206 (99%) Strand = Plus / Plus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 482 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 542 Query: 122 gagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctg 181 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 543 gagccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctg 602 Query: 182 ggtgatctatccatgaccaggatgaa 207 |||||||||||||||||||||||||| Sbjct: 603 ggtgatctatccatgaccaggatgaa 628
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 398 bits (201), Expect = e-108 Identities = 432/505 (85%), Gaps = 8/505 (1%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 || ||| | || ||||| |||| |||| |||||| ||||| | | || || |||| Sbjct: 602 gg----gaatcg-ccagagccatagcaaaagtaagtcttcataggacaaatgccattgct 656 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||| ||| || |||||||| ||||||||| |||||| || | |||||||||| Sbjct: 657 tatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaactaagt 716 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 ggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 776 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 | || ||||||||| |||||||||||||||||||||||||||| ||||| ||| | | | Sbjct: 777 gtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccg-tatc 835 Query: 346 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||| Sbjct: 836 cagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgag 895 Query: 406 gcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtga 463 ||||||| |||||| |||||||||| ||||||||||||||| | ||||| | |||| || Sbjct: 896 gcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcga 955 Query: 464 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 523 ||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||||||| Sbjct: 956 gaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcc 1015 Query: 524 cctaaatgaccgctcagtgataaag 548 ||||||||||| || ||| |||||| Sbjct: 1016 cctaaatgaccactaagttataaag 1040
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 392 bits (198), Expect = e-106 Identities = 343/389 (88%), Gaps = 3/389 (0%) Strand = Plus / Plus Query: 162 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 221 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 222 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 281 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 282 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 341 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 342 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 401 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 402 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 459 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 460 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 519 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 520 ggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||| || ||| |||||| Sbjct: 1012 ggcccctaaatgaccactaagttataaag 1040 Score = 60.0 bits (30), Expect = 8e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 106 gg 107 || Sbjct: 602 gg 603
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 377 bits (190), Expect = e-101 Identities = 358/410 (87%), Gaps = 8/410 (1%) Strand = Plus / Plus Query: 21 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 80 ||||||||||||||| || || | |||||||| |||||| ||||||||||||| ||||| Sbjct: 531 ccaagcagtgggaggagacaggg--ctctgaccacgtgcccgttgaagaatgagtcggcg 588 Query: 81 actcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaagcgag 140 ||||||| | |||||| ||||||||| |||| ||||||||||| |||||||||| || Sbjct: 589 actcataagtagtggcctggttaagg----ggaa-ccaccggagccatagcgaaagcaag 643 Query: 141 tcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgacca 200 |||| |||||| | ||||| ||||| ||||||||||| ||||||||||| ||||||||| Sbjct: 644 tcttcatagggaaaatgtcattgcttgtggacccgaacttgggtgatctaaccatgacca 703 Query: 201 ggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcg 260 ||||| | |||| | |||||||| | |||| ||||||||||||||||||||||||||| Sbjct: 704 ggatgcaatttggttaaaactaagtgggggtctgaaccgactgatgttgaagaatcagcg 763 Query: 261 gatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccga 320 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||| Sbjct: 764 gatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagctggttcgccccga 823 Query: 321 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 380 ||||| || ||||||||||||| || || ||||||||||||||||| ||||| ||||||| Sbjct: 824 aatgcatttaggcgcagcagtt-accgggcatctaggggtaaagcattgttttggtgcgg 882 Query: 381 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 430 | || |||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 883 gtcacgagagcggtaccaaattgaggcagactatgaatactagatatgac 932 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 433 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 492 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 493 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaag 548 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaag 1059
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 377 bits (190), Expect = e-101 Identities = 336/381 (88%), Gaps = 9/381 (2%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 107 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagga 688 Query: 108 aacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgct 165 ||| | |||||||| ||||||||| |||||||||||||||||| |||||| | Sbjct: 689 ----gaatcatccggagccagagcgaaagcaagtcttaatagggcgattttgtcactttt 744 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 745 tatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagt 804 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||||| Sbjct: 805 ggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaat 864 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga- 344 |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 865 gccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgat 924 Query: 345 -ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 402 || | ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 925 gttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 984 Query: 403 gaggcaaactctgaatactag 423 | ||||||| ||||||||| Sbjct: 985 gtagcaaactaagaatactag 1005 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 517 taaggcccctaaatgaccgctcagtg 542 |||||||||| |||| ||||| |||| Sbjct: 1083 taaggcccctgaatggccgctaagtg 1108
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 337 bits (170), Expect = 2e-89 Identities = 329/379 (86%), Gaps = 6/379 (1%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| | Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaaggaa 773 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | | || |||||| ||||||||| |||||||||||||| |||||| |||| Sbjct: 774 aaaaatcc----ggagccaaagcgaaagcaagtcttaatagggctcaggtcactctttat 829 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||| |||||||||| |||||||||||||||||||| | | |||| || || Sbjct: 830 ggacccgaacccgggtgatctaaccatgaccaggatgaagcttcggtaaaacggagtgga 889 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 890 agtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgcc 949 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac-tg 347 | |||||| | ||||||||||||||||||||||||||||||||||||||| ||| || || Sbjct: 950 aatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaacgtg 1009 Query: 348 gac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 406 | | ||||||||||||||||||||||||||||||||||| |||||||||||||||| | Sbjct: 1010 ggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtag 1069 Query: 407 caaactctgaatactagat 425 |||||| ||||||||||| Sbjct: 1070 caaactaagaatactagat 1088 Score = 127 bits (64), Expect = 4e-26 Identities = 85/92 (92%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 |||||||||| |||| ||||| |||| ||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaag 1194
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 337 bits (170), Expect = 2e-89 Identities = 278/311 (89%), Gaps = 6/311 (1%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 176 |||||||| ||||||||||||||| |||||||| || |||||| |||||||||||| Sbjct: 632 ccggagccaaagcgaaagcgagtctgaatagggcacttttgtcactttttatggacccga 691 Query: 177 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 236 ||| |||||||||| |||||||||||||||||||||| | |||| ||| |||||||||| Sbjct: 692 acccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaa 751 Query: 237 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 296 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 752 ccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaac 811 Query: 297 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-at 352 | ||||||||||||||||||||||||||||||||||||||| |||||| ||| | || Sbjct: 812 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctat 871 Query: 353 ctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 412 |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct: 872 ctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaact 931 Query: 413 ctgaatactag 423 ||||||||| Sbjct: 932 aagaatactag 942 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||| ||||| |||||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaag 1051 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 566 tgaccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 327 bits (165), Expect = 2e-86 Identities = 277/313 (88%), Gaps = 1/313 (0%) Strand = Plus / Plus Query: 118 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 177 |||| |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||| Sbjct: 592 accgaagccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaa 651 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || |||||||||||||||| ||||||||||| |||| |||||| || ||||||||||| Sbjct: 652 cccgggtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaac 711 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||||| ||||||| || || |||||||| ||||| ||||||||||||||||||||||| Sbjct: 712 cgactggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaact 771 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctag 356 | ||||||||||||||||||||||||||||||||||||||| ||||||| ||| || ||| Sbjct: 772 cggagctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttag 831 Query: 357 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 416 |||||||||||||||||||||||||||| | | ||||||||||| || ||||||||||| Sbjct: 832 gggtaaagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctga 891 Query: 417 atactagatatga 429 |||||| |||||| Sbjct: 892 atactaaatatga 904 Score = 137 bits (69), Expect = 4e-29 Identities = 87/93 (93%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 516 ctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||| |||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaag 1007 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 22 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||| || | || ||||||||||||||||||||||||||||||||||| Sbjct: 503 caagcagtgggaggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcga 562 Query: 82 ctcataggcagtggcttggttaagg 106 || |||||||||||| ||||||||| Sbjct: 563 cttataggcagtggcctggttaagg 587
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Minus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 114870 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 114812 Query: 107 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 165 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 114811 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 114754 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 114753 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 114694 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 114693 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 114634 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 114633 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 114574 Query: 346 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 404 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 114573 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 114514 Query: 405 ggcaaactctgaatacta 422 |||||||||||||||||| Sbjct: 114513 ggcaaactctgaatacta 114496 Score = 323 bits (163), Expect = 3e-85 Identities = 328/378 (86%), Gaps = 5/378 (1%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 |||||| |||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 2647 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaagg 2705 Query: 107 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgct 165 || | | || |||||| |||||||||||||| | |||| ||| || |||||| | Sbjct: 2706 taaagaatt--actggagccctagcgaaagcgagtttgtatagagcgttttgtcactatt 2763 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 ||| |||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| Sbjct: 2764 tatagacccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagt 2823 Query: 226 agaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaat 285 |||| |||||| || | |||||||| ||| | ||||||||||||||||||||||||||| Sbjct: 2824 ggaggcccgaactgattaatgttgaaaaattaccggatgagttgtggttaggggtgaaat 2883 Query: 286 gccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgac 345 |||| |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 2884 gccaatcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgag 2943 Query: 346 tggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 404 | | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2944 attataacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcga 3003 Query: 405 ggcaaactctgaatacta 422 |||||||||||||||||| Sbjct: 3004 ggcaaactctgaatacta 3021 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 516 ctaaggcccctaaat 530 |||||||||||||| Sbjct: 114423 ttaaggcccctaaat 114409 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 516 ctaaggcccctaaat 530 |||||||||||||| Sbjct: 3094 ttaaggcccctaaat 3108
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 317 bits (160), Expect = 2e-83 Identities = 322/371 (86%), Gaps = 5/371 (1%) Strand = Plus / Plus Query: 54 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 113 |||||||||||||||||||||||||||||| ||||| |||||| |||||||| || | Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggca-ggttaaggtaatg-- 2441 Query: 114 acccaccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggac 172 | || |||||| |||||||||||||| ||||||| ||| || |||||| |||| ||| Sbjct: 2442 atttactggagccatagcgaaagcgagttttaatagagcgtttagtcactatttatagac 2501 Query: 173 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 232 ||||||| |||||||||| ||||| ||||| |||||||| | | ||||||| |||| | Sbjct: 2502 ccgaacccgggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcc 2561 Query: 233 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 292 |||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| || Sbjct: 2562 cgaaccgatcgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatc 2621 Query: 293 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggaca 351 |||||| ||||||||||||||||||||||||||||||||||||||| ||||| | | Sbjct: 2622 gaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataa 2681 Query: 352 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 411 | |||||||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 2682 tttaggggtaaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaac 2741 Query: 412 tctgaatacta 422 ||||||||||| Sbjct: 2742 tctgaatacta 2752 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 529 at 530 || Sbjct: 2838 at 2839
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 315 bits (159), Expect = 8e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 111 ggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 170 |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 5 ggaacccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgg 64 Query: 171 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 230 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 65 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 124 Query: 231 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 289 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 125 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 315 bits (159), Expect = 8e-83 Identities = 329/382 (86%), Gaps = 9/382 (2%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 |||||||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 107 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcga--ttgtcactgc 164 | ||| | ||| |||| ||||||||| ||||| |||||||| | | |||||| Sbjct: 598 g---ggattac-ccgaagccaaagcgaaagcaagtctgaatagggcaaaatcgtcacttt 653 Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 ||| ||||||||||| |||||||||| ||||| |||||||||||||||| | |||| ||| Sbjct: 654 ttagggacccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaaccaag 713 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 ||||||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||| Sbjct: 714 tggaggtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaa 773 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt-- 342 ||||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 774 tgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttgg 833 Query: 343 -gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 401 ||| || |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct: 834 cgacgggctgtctaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaat 893 Query: 402 cgaggcaaactctgaatactag 423 || ||||||| ||||||||| Sbjct: 894 cgtagcaaactaagaatactag 915 Score = 95.6 bits (48), Expect = 1e-16 Identities = 81/92 (88%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 ||||||||| |||| ||||| |||| ||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaag 1024
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 227 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 286 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 287 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 346 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 347 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 406 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 407 caaactctgaatactagatat 427 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 154 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 213 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 214 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 273 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 274 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 333 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 334 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 390 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 391 cggtaccaaatcgaggcaaactctgaatactaga 424 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 131 bits (66), Expect = 3e-27 Identities = 81/86 (94%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||| ||||||||||| |||| Sbjct: 1150 taaggccccaaaatgaccgctaagtg 1175 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 693 tgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 305 bits (154), Expect = 8e-80 Identities = 154/154 (100%) Strand = Plus / Minus Query: 395 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 454 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 455 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 514 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 515 gctaaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaag 366
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 170 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 229 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 230 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 289 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 290 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 348 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 349 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 408 aaactctgaatactagatatgac 430 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 519 aggcccctaaatg 531 ||||||| ||||| Sbjct: 6706 aggccccaaaatg 6718 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 123 agccgtagcgaaagcgagtcttaatagggcgat 155 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 170 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 229 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 230 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 289 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 290 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 348 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 349 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 408 aaactctgaatactagatatgac 430 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 519 aggcccctaaatg 531 ||||||| ||||| Sbjct: 3769 aggccccaaaatg 3781 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 123 agccgtagcgaaagcgagtcttaatagggcgat 155 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 170 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 229 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 230 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 289 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 290 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 348 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 349 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 408 aaactctgaatactagatatgac 430 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 519 aggcccctaaatg 531 ||||||| ||||| Sbjct: 1057 aggccccaaaatg 1069 Score = 63.9 bits (32), Expect = 5e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 123 agccgtagcgaaagcgagtcttaatagggcgat 155 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 192429 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 192488 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 192489 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 192543 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 192544 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 192603 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 192604 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 192663 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 346 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 192664 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 192723 Query: 347 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 192724 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 192783 Query: 406 gcaaactctgaatacta 422 ||||||| |||||||| Sbjct: 192784 gcaaactaagaatacta 192800 Score = 295 bits (149), Expect = 8e-77 Identities = 323/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 144353 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggta 144294 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | || ||||||||| ||||||||| ||||| ||||||||| |||||||| ||||| Sbjct: 144293 a---aat--accggagccaaagcgaaagcaagtctgaatagggcgcttgtcacttcttat 144239 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||| | |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 144238 ggacccgaacccgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 144179 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 144178 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 144119 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 346 | |||||| | ||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 144118 agtcgaactcggagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 144059 Query: 347 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 || | || ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 144058 gggctatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 143999 Query: 406 gcaaactctgaatacta 422 ||||||| |||||||| Sbjct: 143998 gcaaactaagaatacta 143982 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 529 atgaccgctcagtg 542 ||| ||||| |||| Sbjct: 192890 atggccgctaagtg 192903 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 529 atgaccgctcagtg 542 ||| ||||| |||| Sbjct: 143892 atggccgctaagtg 143879
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 293 bits (148), Expect = 3e-76 Identities = 178/188 (94%), Gaps = 5/188 (2%) Strand = Plus / Minus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 106 ggaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgct 165 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 123 ggaac-----ccaccggagccgtagcgaaagcgagtcttcatagggcaattgtcactgct 69 Query: 166 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagc 225 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 68 tatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagt 9 Query: 226 agaggtcc 233 ||||||| Sbjct: 8 ggaggtcc 1
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 289 bits (146), Expect = 5e-75 Identities = 263/302 (87%) Strand = Plus / Plus Query: 120 cggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacc 179 ||||||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| Sbjct: 2189 cggagccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacc 2248 Query: 180 tgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccg 239 || ||||||| |||| |||||||||||||| | | | ||| || ||||||||||||| Sbjct: 2249 cggatgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccg 2308 Query: 240 actgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccca 299 |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || Sbjct: 2309 actgatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccg 2368 Query: 300 gagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctagggg 359 ||||||||||||||||||||||||||||||||||||||| ||| | | | | |||| Sbjct: 2369 gagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttggggg 2428 Query: 360 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 419 ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| Sbjct: 2429 taaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaata 2488 Query: 420 ct 421 || Sbjct: 2489 ct 2490 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 |||||||||||||| | ||| |||||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaag 2596 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 ||||||| ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 157 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 216 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 217 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 276 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 277 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 336 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 337 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 393 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 394 taccaaatcgaggcaaactctgaatactaga 424 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 151 bits (76), Expect = 3e-33 Identities = 88/92 (95%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||||||||||| |||| ||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaag 1057 Score = 89.7 bits (45), Expect = 9e-15 Identities = 54/57 (94%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104 |||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 176 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 621 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 680 Query: 177 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 236 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 681 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 740 Query: 237 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 296 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 741 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 800 Query: 297 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 355 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 801 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 860 Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 861 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 920 Query: 416 aatactagata 426 ||||||||||| Sbjct: 921 aatactagata 931 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 516 ctaaggcccctaaatga 532 |||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatga 1020 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 285 bits (144), Expect = 7e-74 Identities = 271/311 (87%), Gaps = 3/311 (0%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 176 ||||||||| ||||||||| ||||| ||||||||||| |||| || | ||||||| Sbjct: 25430 ccggagccgaagcgaaagcaagtctgaatagggcgataaagtcatattttctagacccga 25489 Query: 177 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 236 ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||||||| Sbjct: 25490 acccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaaggtccgaa 25549 Query: 237 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 296 ||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| |||||| Sbjct: 25550 ccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaataccagtcgaac 25609 Query: 297 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatcta 355 | ||||||||||||||||||||||||||||||||||||||| ||| | || | || Sbjct: 25610 tcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataaggctgttta 25669 Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 25670 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactctg 25729 Query: 416 aatactagata 426 ||||||||||| Sbjct: 25730 aatactagata 25740 Score = 121 bits (61), Expect = 3e-24 Identities = 73/77 (94%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 516 ctaaggcccctaaatga 532 |||||||||| |||||| Sbjct: 25813 ctaaggccccaaaatga 25829 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 283 bits (143), Expect = 3e-73 Identities = 264/303 (87%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 178 |||||||| || |||| ||||||| |||||||||| ||||| |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaatagggcgaaagtcacattttatagacccgaac 308 Query: 179 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 238 | |||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 ccgggtgatctaaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 239 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 298 ||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaaccc 428 Query: 299 agagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctag-g 357 ||||||||||||||||||||||||| ||| ||||||||| || | |||||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaacgattaaatctaggg 488 Query: 358 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 417 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 489 ggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaa 548 Query: 418 tac 420 ||| Sbjct: 549 tac 551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 516 ctaaggcccctaaatgaccgctcagtgataaag 548 |||||| ||| ||||| ||| |||||||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaag 658 Score = 60.0 bits (30), Expect = 8e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 56 gtgcctgttgaagaatgagccggcgactcatagg 89 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 123 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 182 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 183 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 242 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 243 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 302 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 303 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 359 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 360 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 419 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 420 ctaga 424 ||||| Sbjct: 935 ctaga 939 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||||||||| ||||| |||| Sbjct: 1017 taaggcccctaaatggccgctaagtg 1042 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 187 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 188 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 247 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 248 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 307 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 308 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 364 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 365 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 421 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 107 bits (54), Expect = 4e-20 Identities = 69/74 (93%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 517 taaggcccctaaat 530 |||||||||||||| Sbjct: 995 taaggcccctaaat 1008 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 89 ||||||||| ||||||||||||||| ||||||||| ||||| Sbjct: 543 tgaccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 123 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 182 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 183 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 242 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 243 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 302 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 303 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 359 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 360 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 419 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 420 ctaga 424 ||||| Sbjct: 2817 ctaga 2821 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 517 taaggcccctaaatgaccgctcagtg 542 ||||||||||||||| ||||| |||| Sbjct: 2899 taaggcccctaaatggccgctaagtg 2924 Score = 101 bits (51), Expect = 2e-18 Identities = 57/59 (96%) Strand = Plus / Plus Query: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 132 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 191 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 192 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 251 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 252 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 311 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 312 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 370 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 371 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 132 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 191 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 192 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 251 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 252 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 311 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 312 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 370 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 371 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 517 taaggcccctaaat 530 |||||||||||||| Sbjct: 189932 taaggcccctaaat 189945 Score = 99.6 bits (50), Expect = 9e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 517 taaggcccctaaat 530 |||||||||||||| Sbjct: 151359 taaggcccctaaat 151372 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 55 cgtgcctgttgaagaatgagccggcgactcatag 88 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 55 cgtgcctgttgaagaatgagccggcgactcatag 88 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 280 bits (141), Expect = 5e-72 Identities = 321/377 (85%), Gaps = 8/377 (2%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||| | Sbjct: 598 tgaccgcatgcctgttgaagaatgagccggcgacttatagggagtggcttggttaaggca 657 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | || || |||||| ||||||||| ||||| ||||||||| |||||||| |||| Sbjct: 658 aa--aagcc---ggagccaaagcgaaagcaagtctgaatagggcgcttgtcactttttat 712 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 ||||||||||||| |||||||| ||||| |||||||||| ||||| | | || || || Sbjct: 713 ggacccgaacctgagtgatctaaccatggccaggatgaatcttgggtaacaccaaatgga 772 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 | |||||||||| ||||||||| |||| ||||||||| |||||||||||||||||| || Sbjct: 773 agaccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttaggggtgaaattcc 832 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 346 | |||||| ||||||||||||| ||||| ||||||| ||||||||||||| ||||| | Sbjct: 833 agtcgaactcagagctagctggatctcctcgaaatgtgttgaggcgcagcggttgatgat 892 Query: 347 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 405 || | | ||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct: 893 gggctagttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtc 952 Query: 406 gcaaactctgaatacta 422 ||||||| |||||||| Sbjct: 953 gcaaactaagaatacta 969 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 529 atgaccgctcagtg 542 ||| ||||| |||| Sbjct: 1059 atggccgctaagtg 1072
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 278 bits (140), Expect = 2e-71 Identities = 315/369 (85%), Gaps = 7/369 (1%) Strand = Plus / Plus Query: 56 gtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaac 115 |||| ||||||||||||||||||||||| ||| | |||||| |||||||| || | | Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggtaaagaat- 188629 Query: 116 ccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccg 175 |||| |||| || ||||||||| | ||||| ||| | |||||| |||| |||||| Sbjct: 188630 --accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttatagacccg 188687 Query: 176 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 235 |||| || ||||||| ||||| ||||| |||||||| | | | |||||| ||||||||| Sbjct: 188688 aacccggatgatctagccatggccagggtgaagcttaggtaacactaagtggaggtccga 188747 Query: 236 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 295 ||||||| |||||||| ||| |||||||||||||||| |||||||||||||||| ||||| Sbjct: 188748 accgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgccaatcgaa 188807 Query: 296 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ctggacatc 353 || ||||||||||||||||||||||||| ||||||||||||| ||||| || | | Sbjct: 188808 tccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct-taaact 188866 Query: 354 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 413 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 414 tgaatacta 422 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 276 bits (139), Expect = 7e-71 Identities = 320/376 (85%), Gaps = 7/376 (1%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 ||||| ||||| ||||||||||||||||||||||| ||| | |||||| |||||||| | Sbjct: 150122 tgacctcgtgcatgttgaagaatgagccggcgacttataagtagtggca-ggttaaggta 150180 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 | | | |||| |||| || ||||||||| | ||||| ||| | |||||| |||| Sbjct: 150181 aagaat---accgaagccaaagtgaaagcgagcttgaatagagcgttggtcactatttat 150237 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| || Sbjct: 150238 agacccgaacccggatgatctagccatggccagggtgaagcttaggtaacactaagtgga 150297 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 ||||||| |||||| |||||||| ||| |||||||||||||||| ||||||||||||||| Sbjct: 150298 ggtccgagccgactaatgttgaaaaattagcggatgagttgtggctaggggtgaaatgcc 150357 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga--ct 346 | ||||| || ||||||||||||||||||||||||| ||||||||||||| ||||| || Sbjct: 150358 aatcgaatccggagctagctggttctccccgaaatgtgttgaggcgcagcggttgatgct 150417 Query: 347 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 406 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 150418 -taaacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagg 150476 Query: 407 caaactctgaatacta 422 |||||||||||||||| Sbjct: 150477 caaactctgaatacta 150492 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 519 aggcccctaaat 530 ||||||| |||| Sbjct: 189011 aggccccaaaat 189022 Score = 87.7 bits (44), Expect = 4e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 459 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 518 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 519 aggcccctaaat 530 ||||||| |||| Sbjct: 150568 aggccccaaaat 150579
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Minus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 5974 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 5915 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 5914 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 5855 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 5854 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 5795 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 5794 agctagctggttctccccgaaatacgttgaggcg 5761 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6041 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 5585 atcaacactaagtgataaag 5566 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| Sbjct: 211798 ggagccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaaccc 211857 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 211858 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 211917 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 211918 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 211977 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 211978 agctagctggttctccccgaaatacgttgaggcg 212011 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211731 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 212187 atcaacactaagtgataaag 212206 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 274 bits (138), Expect = 3e-70 Identities = 195/214 (91%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 344 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 345 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 401 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 402 cgaggcaaactctgaatact 421 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 123 bits (62), Expect = 6e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 517 taaggcccctaaat 530 |||||||||||||| Sbjct: 1025 taaggcccctaaat 1038 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 344 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 345 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 401 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 402 cgaggcaaactctgaatact 421 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 123 bits (62), Expect = 6e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 517 taaggcccctaaat 530 |||||||||||||| Sbjct: 2763 taaggcccctaaat 2776 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 270 bits (136), Expect = 4e-69 Identities = 136/136 (100%) Strand = Plus / Plus Query: 413 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 473 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 533 ccgctcagtgataaag 548 |||||||||||||||| Sbjct: 121 ccgctcagtgataaag 136
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 270 bits (136), Expect = 4e-69 Identities = 251/286 (87%), Gaps = 5/286 (1%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 108 |||||| |||||||||||||||||||||||||||| ||||| | |||| ||||||||| Sbjct: 2776 tgaccgtgtgcctgttgaagaatgagccggcgacttataggtactggca-ggttaaggg- 2833 Query: 109 acggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttat 168 |||| | |||||||| ||||||||||||||| ||||||||||| |||| | |||| Sbjct: 2834 --ggaaatc-ccggagccacagcgaaagcgagtctgaatagggcgatggtcagtatttat 2890 Query: 169 ggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcaga 228 |||||||||| |||||||||| ||||| |||||||||||||||| ||| || | | || Sbjct: 2891 agacccgaacccgggtgatctaaccatggccaggatgaagcttgggtgataccacgtgga 2950 Query: 229 ggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcc 288 ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2951 ggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgcc 3010 Query: 289 actcgaacccagagctagctggttctccccgaaatgcgttgaggcg 334 | |||||||| |||||||||||||||||||||||| |||| ||||| Sbjct: 3011 aatcgaacccggagctagctggttctccccgaaatacgtttaggcg 3056 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 356 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 414 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 415 gaatac 420 |||||| Sbjct: 3139 gaatac 3144 Score = 79.8 bits (40), Expect = 9e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 3232 ataagcgctaagtgataaag 3251
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 173 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 174 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 233 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 234 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 293 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 294 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 350 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 351 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 409 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 410 actctgaatactagata 426 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 491 agagggaaacagcccggatcaccagctaaggcccctaaatg 531 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 268 bits (135), Expect = 2e-68 Identities = 274/317 (86%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 173 |||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 762 ccggagccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacc 821 Query: 174 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 233 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 822 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 881 Query: 234 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 293 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 882 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 941 Query: 294 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 350 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 942 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1000 Query: 351 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 409 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1001 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1060 Query: 410 actctgaatactagata 426 |||| |||||||||||| Sbjct: 1061 actcagaatactagata 1077 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 491 agagggaaacagcccggatcaccagctaaggcccctaaatg 531 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 132 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 191 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 192 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 251 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 252 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 311 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 312 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 368 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 369 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 97.6 bits (49), Expect = 4e-17 Identities = 82/93 (88%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 516 ctaaggcccctaaatgaccgctcagtgataaag 548 |||||| ||| |||| | |||| |||||||||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaag 658 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 91 ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 178 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 137118 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 137177 Query: 179 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 238 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 137178 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 137237 Query: 239 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 298 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 137238 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 137297 Query: 299 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 355 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 137298 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 137357 Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 137358 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 137417 Query: 416 aatactag 423 |||||||| Sbjct: 137418 aatactag 137425 Score = 266 bits (134), Expect = 7e-68 Identities = 265/308 (86%), Gaps = 3/308 (0%) Strand = Plus / Minus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 178 |||||||| ||||||||| ||||| ||||||||| |||||||| ||||||||||||||| Sbjct: 48426 ccggagcctaagcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaac 48367 Query: 179 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 238 | |||||||||| |||||||||||||||||||||| | |||| ||| || | ||||||| Sbjct: 48366 ccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaacc 48307 Query: 239 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 298 ||| ||||||||| |||| |||||||||||||||||||||| ||||| | | |||||| | Sbjct: 48306 gaccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactc 48247 Query: 299 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatcta 355 |||||||||||||||| ||||||| ||||||||||||| ||| ||| || |||| Sbjct: 48246 ggagctagctggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtcta 48187 Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||||||||||||||||||||||| | | |||||||||||| |||||||| | Sbjct: 48186 ggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcag 48127 Query: 416 aatactag 423 |||||||| Sbjct: 48126 aatactag 48119 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 517 taaggcccctaaatg 531 ||||||||||||||| Sbjct: 137502 taaggcccctaaatg 137516 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 517 taaggcccctaaatg 531 ||||||||||||||| Sbjct: 48042 taaggcccctaaatg 48028 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137053 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48491 tgaccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 266 bits (134), Expect = 7e-68 Identities = 267/310 (86%), Gaps = 6/310 (1%) Strand = Plus / Plus Query: 118 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 177 ||||||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||| Sbjct: 624 accggagccagagcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaa 683 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || |||||||||| ||||| |||||| ||||||||| |||||| | || |||||||| Sbjct: 684 cccgggtgatctaaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaac 743 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||| || |||||||| || |||||||||||||||||||||||||||| ||| |||||| Sbjct: 744 cgaccgacgttgaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaact 803 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca- 351 | ||||||||||||||||||||||||||||||||||||||| || || ||| || Sbjct: 804 cggagctagctggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcag 863 Query: 352 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 411 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 412 tctgaatact 421 | ||||||| Sbjct: 924 taagaatact 933 Score = 127 bits (64), Expect = 4e-26 Identities = 88/96 (91%) Strand = Plus / Plus Query: 453 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 512 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 513 cagctaaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||| |||| |||||||||||||||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaag 1043 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 266 bits (134), Expect = 7e-68 Identities = 194/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| Sbjct: 356101 ggagccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccc 356160 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 ||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 356161 tggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 356220 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| | Sbjct: 356221 ctgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccagg 356280 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 356281 agctagctggttctccccgaaatacgttgaggcg 356314 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356034 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386 Score = 44.1 bits (22), Expect = 0.48 Identities = 52/62 (83%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 529 at 530 || Sbjct: 356490 at 356491
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 262 bits (132), Expect = 1e-66 Identities = 323/379 (85%), Gaps = 7/379 (1%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||| ||||| ||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggca-ggttaagg 2379 Query: 107 -gaacggaacccaccggagccgtagcgaaagcgagtcttaatagg-gcgattgtcactgc 164 | | ||| ||||||||| ||| ||||||||| ||| ||| | ||| | ||||||| Sbjct: 2380 cgtaaagaat--accggagccatagtgaaagcgag-cttgataagagcgttcgtcactgt 2436 Query: 165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 224 ||| |||||||||| || ||||||| |||| ||||| |||||||| | | | |||||| Sbjct: 2437 ttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggtaacactaag 2496 Query: 225 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 284 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 2497 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattaggggtgaaa 2556 Query: 285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 344 ||||| ||||| || ||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 2557 tgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgcagcggttga 2616 Query: 345 ctggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 403 | | | ||||||||||||||||||||||| ||||||| | ||||||||||||||| Sbjct: 2617 tgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggtaccaaatcg 2676 Query: 404 aggcaaactctgaatacta 422 ||||||||||||||||||| Sbjct: 2677 aggcaaactctgaatacta 2695 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 517 taaggcccctaaat 530 |||||||||||||| Sbjct: 2769 taaggcccctaaat 2782
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2138158 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 2138099 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2138098 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2138039 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2138038 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 2137979 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 2137978 agctagctggttctccccgaaatacgttgaggcg 2137945 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 476702 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 476761 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 476762 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 476821 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 476822 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 476881 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 476882 agctagctggttctccccgaaatacgttgaggcg 476915 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138225 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 2137769 atcaacactaagtgataaag 2137750 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 477091 atcaacactaagtgataaag 477110 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476635 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 476682 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 132 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 191 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 192 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 251 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 252 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 311 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 312 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 368 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 369 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 516 ctaaggcccctaaatgaccgctcagtgataaag 548 |||||| ||| |||| | |||| | |||||||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaag 658 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 91 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 258 bits (130), Expect = 2e-65 Identities = 253/292 (86%), Gaps = 4/292 (1%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 |||||| |||||||||||||||||||||||||||||| ||| | |||||| |||||||| Sbjct: 2303 tctgactgcgtgcctgttgaagaatgagccggcgacttataagtagtggca-ggttaagg 2361 Query: 107 gaacggaacccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 166 | | | ||||||||| ||| ||||||||| || ||||||||| ||||||||| || Sbjct: 2362 tagagaat---accggagccatagtgaaagcgagcctgaatagggcgtttgtcactggtt 2418 Query: 167 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 226 || |||||||||| || ||||||| ||||| ||||| |||||||| | | | |||||| Sbjct: 2419 atagacccgaacccggatgatctaaccatggccaggttgaagcttaggtaatactaagtg 2478 Query: 227 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 286 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2479 gaggaccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 2538 Query: 287 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagc 338 ||| ||||| | ||||||||||||||||||||||||||||| ||||||||| Sbjct: 2539 ccaatcgaattcggagctagctggttctccccgaaatgcgtttaggcgcagc 2590 Score = 85.7 bits (43), Expect = 1e-13 Identities = 79/91 (86%) Strand = Plus / Plus Query: 458 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 517 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 518 aaggcccctaaatgaccgctcagtgataaag 548 ||||||||||||| | ||| |||||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaag 2781
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 339409 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 339350 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 339349 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 339290 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 339289 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 339230 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 339229 agctagctggttctccccgaaatacgttgaggcg 339196 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Minus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 132469 ggagccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaaccc 132410 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 132409 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 132350 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 132349 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 132290 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 132289 agctagctggttctccccgaaatacgttgaggcg 132256 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339476 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132536 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 132489 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 339020 atcaacactaagtgataaag 339001 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 132080 atcaacactaagtgataaag 132061
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 258 bits (130), Expect = 2e-65 Identities = 193/214 (90%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 485 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 544 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 545 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 604 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 |||| |||||| | |||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 605 ctgacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 664 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 665 agctagctggttctccccgaaatacgttgaggcg 698 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 123 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 180 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 301 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 357 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 358 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 416 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 417 atactagatatg 428 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 109 bits (55), Expect = 1e-20 Identities = 70/75 (93%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 517 taaggcccctaaatg 531 ||||||||||||||| Sbjct: 1038 taaggcccctaaatg 1052 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 107 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Minus Query: 59 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 118 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 39800 Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 177 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 39799 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 39740 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 39739 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 39680 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 39679 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 39620 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 356 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 39619 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 39560 Query: 357 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 416 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 39559 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 39500 Query: 417 atacta 422 |||||| Sbjct: 39499 atacta 39494 Score = 254 bits (128), Expect = 3e-64 Identities = 310/366 (84%), Gaps = 6/366 (1%) Strand = Plus / Plus Query: 59 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaaccca 118 ||||||||||||||||||||||||| |||| |||||| |||||||| | ||| | Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggca-ggttaaggta---gaaaata 19600 Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaa 177 |||||||| || ||||||||| ||||||| ||| || ||||||| ||| |||||||| Sbjct: 19601 ccggagccagagtgaaagcgagctttaatagagcgttttgtcactgtttacagacccgaa 19660 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || || ||||||| ||||| |||| |||||||| | | | |||||| ||||| ||||| Sbjct: 19661 cccggatgatctaaccatggccagcgtgaagcttaggtaacactaagtggaggtgcgaac 19720 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| | Sbjct: 19721 cgactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaatc 19780 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-tag 356 | ||||||||||||||||||||||||||||| ||||||||| |||| || | ||| Sbjct: 19781 cggagctagctggttctccccgaaatgcgtttaggcgcagcgattgatgctccaacttag 19840 Query: 357 gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 416 ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| Sbjct: 19841 gggtaaagcactgtttcggtgcgggctgctaacgcggtaccaaatcgatgcaaactctga 19900 Query: 417 atacta 422 |||||| Sbjct: 19901 atacta 19906 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 529 atgaccgctcagtgataaag 548 || | ||| |||||||||| Sbjct: 39408 ataattgctaagtgataaag 39389 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 529 atgaccgctcagtgataaag 548 || | ||| |||||||||| Sbjct: 19992 ataattgctaagtgataaag 20011
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 252 bits (127), Expect = 1e-63 Identities = 272/317 (85%), Gaps = 10/317 (3%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacc 173 |||||||| ||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 816 ccggagccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacc 875 Query: 174 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 233 |||||| |||||||||| ||||||||||||||||||||| | | || ||| ||||||| Sbjct: 876 cgaacccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtcc 935 Query: 234 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 293 |||||||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| ||| Sbjct: 936 gaaccgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcg 995 Query: 294 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggac 350 ||| | ||||||||||| ||||||||||||||||||||||||||| | ||||| | Sbjct: 996 aactcggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagct 1054 Query: 351 atctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 409 |||||| |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||| Sbjct: 1055 atctagaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaa 1114 Query: 410 actctgaatactagata 426 |||| |||||||||||| Sbjct: 1115 actcagaatactagata 1131 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 750 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 491 agagggaaacagcccggatcaccagctaaggcccctaaatg 531 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatg 1220
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 310/368 (84%), Gaps = 5/368 (1%) Strand = Plus / Plus Query: 54 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 113 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 114 acccaccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacc 173 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| |||| Sbjct: 247 accc---gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagacc 303 Query: 174 cgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtcc 233 |||||| |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||| Sbjct: 304 cgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtcc 363 Query: 234 gaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcg 293 |||||||| |||||| | ||||||||| |||||||||||||||||||||| ||| Sbjct: 364 gaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatcg 423 Query: 294 aacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc 353 ||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| | Sbjct: 424 aacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacagc 483 Query: 354 t-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 412 | |||||||||||||| |||||||||||||||| |||||||||||||||||| |||||| Sbjct: 484 tggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaact 543 Query: 413 ctgaatac 420 | |||||| Sbjct: 544 cagaatac 551 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 516 ctaaggcccctaaatg 531 |||||| ||||||||| Sbjct: 626 ctaaggtccctaaatg 641
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 309 ggttctccccgaaatgcgttgaggcgcagc 338 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 416 aatac 420 ||||| Sbjct: 548 aatac 552 Score = 103 bits (52), Expect = 6e-19 Identities = 82/92 (89%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 517 taaggcccctaaatgaccgctcagtgataaag 548 ||||| ||| |||| ||| || ||||| |||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaag 659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 309 ggttctccccgaaatgcgttgaggcgcagc 338 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 113 bits (57), Expect = 6e-22 Identities = 84/93 (90%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 516 ctaaggcccctaaatgaccgctcagtgataaag 548 |||||| ||| ||||||| ||| |||||||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaag 659 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 416 aatac 420 ||||| Sbjct: 548 aatac 552 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 184 tgaccgtgtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 177 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 355 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 356 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 414 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 415 gaatactagatatg 428 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 517 taaggcccctaaatg 531 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 97 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 89 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 89 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 250 bits (126), Expect = 4e-63 Identities = 192/214 (89%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| Sbjct: 472 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaaccc 531 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| || Sbjct: 532 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacgga 591 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| | Sbjct: 592 ctgatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccgg 651 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 652 agctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 8e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 89 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 227 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 286 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 287 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 346 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 347 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 403 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 404 aggcaaactctgaatactag 423 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 50 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 515 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 516 ctaaggcccctaaatga 532 ||||||||||| ||||| Sbjct: 1013 ctaaggcccctcaatga 1029 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 156 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 211 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 250 bits (126), Expect = 4e-63 Identities = 271/314 (86%), Gaps = 4/314 (1%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaa 177 |||||||| ||||||||| ||||| ||||||||| ||||||||| |||||||||||||| Sbjct: 648 ccggagcccaagcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaa 707 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || ||||||||||| |||| |||||||||||||||| | | || ||| ||||||||||| Sbjct: 708 cccgggtgatctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaac 767 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 768 cgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaact 827 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atcta 355 | ||||||||||| ||||||||||||||||||||||||||| || | ||| | |||| Sbjct: 828 cggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatctt 887 Query: 356 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 414 |||||||||| ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| Sbjct: 888 ggggtaaagcgactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactca 947 Query: 415 gaatactagatatg 428 |||||| ||||||| Sbjct: 948 gaatacaagatatg 961 Score = 125 bits (63), Expect = 2e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 517 taaggcccctaaatg 531 ||||||||||||||| Sbjct: 1033 taaggcccctaaatg 1047 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 97 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 248 bits (125), Expect = 2e-62 Identities = 197/221 (89%) Strand = Plus / Plus Query: 118 accggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaa 177 ||||||||| ||||||||| ||||| ||||||||| |||| ||||||||||||||||| Sbjct: 622 accggagccagagcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaa 681 Query: 178 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 237 || |||||||||| |||||||||||||||||||| | ||| ||| ||||||||||| Sbjct: 682 cccgggtgatctaaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaac 741 Query: 238 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 297 |||| ||||||||| |||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 742 cgaccgatgttgaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaact 801 Query: 298 cagagctagctggttctccccgaaatgcgttgaggcgcagc 338 | ||||||||||||||||||||||||||||||||||||||| Sbjct: 802 cggagctagctggttctccccgaaatgcgttgaggcgcagc 842 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 516 ctaaggcccctaaatgaccgctcagtg 542 |||||||||| ||||||||||| |||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtg 1030 Score = 111 bits (56), Expect = 2e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 351 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 410 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 411 ctctgaatactagata 426 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 246 bits (124), Expect = 6e-62 Identities = 273/317 (86%), Gaps = 8/317 (2%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccg 175 |||||||| ||||||||||||||| ||||||||| || |||||| |||||||||||| Sbjct: 644 ccggagcccaagcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccg 703 Query: 176 aacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccga 235 |||| ||||||||||| ||||||||||||||||||||| | | || ||| ||||||||| Sbjct: 704 aacccgggtgatctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccga 763 Query: 236 accgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaa 295 |||||| ||||||||| |||| |||||||||||||| |||||| ||||| ||| ||||| Sbjct: 764 accgaccgatgttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaa 823 Query: 296 cccagagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-at 352 | | ||||||||||| ||||||||||||||||||||||||||| || || || || || Sbjct: 824 ctcggagctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactat 882 Query: 353 ctaggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 411 || |||||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||| Sbjct: 883 cttggggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaac 942 Query: 412 tctgaatactagatatg 428 || |||||| ||||||| Sbjct: 943 tcagaatacaagatatg 959 Score = 85.7 bits (43), Expect = 1e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 477 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 531 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatg 2761 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 246 bits (124), Expect = 6e-62 Identities = 178/196 (90%), Gaps = 5/196 (2%) Strand = Plus / Plus Query: 16 agctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 75 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 2577 agctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaagaatgagc 2636 Query: 76 cggcgactcataggcagtggcttggttaagggaacggaacccaccggagccgtagcgaaa 135 |||||||| ||||| |||||| ||||||||||||| |||||||||||||||||||| Sbjct: 2637 cggcgacttataggtagtggcctggttaagggaac-----ccaccggagccgtagcgaaa 2691 Query: 136 gcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccat 195 ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 2692 gcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtgatctaaccat 2751 Query: 196 gaccaggatgaagctt 211 |||||||||||||||| Sbjct: 2752 gaccaggatgaagctt 2767
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 246 bits (124), Expect = 6e-62 Identities = 127/128 (99%) Strand = Plus / Minus Query: 2 gtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcct 61 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 108002 gtgaaaccgtgctgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcct 107943 Query: 62 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107942 gttgaagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccg 107883 Query: 122 gagccgta 129 |||||||| Sbjct: 107882 gagccgta 107875
>emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrnL gene Length = 3017 Score = 246 bits (124), Expect = 6e-62 Identities = 269/314 (85%), Gaps = 5/314 (1%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccga 176 |||||||| |||||||||| ||||||||||||||||| |||||| ||||||||||||| Sbjct: 718 ccggagccttagcgaaagcaagtcttaatagggcgataaagtcacttcttatggacccga 777 Query: 177 acctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaa 236 ||| ||||||||||| |||| |||||||||||||||| | | || || |||||||||| Sbjct: 778 acccgggtgatctattcatggccaggatgaagcttgggtaacacctagtggaggtccgaa 837 Query: 237 ccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaac 296 ||||| ||||||||| |||| ||||||||| |||| |||||| ||||| ||| |||||| Sbjct: 838 ccgaccgatgttgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaac 897 Query: 297 ccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg--actggacatct 354 | ||||||||||| ||||||||||||||||||||||||||| || | | | |||| Sbjct: 898 tcggagctagctggatctccccgaaatgcgttgaggcgcagcggtggctatgagctatct 957 Query: 355 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 413 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 958 agaggtaaagcgactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1017 Query: 414 tgaatactagatat 427 ||||||||||||| Sbjct: 1018 agaatactagatat 1031 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 106 ||||||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 651 ctgaccgcgtgcctgttgaagaatgagcctgcgacttatagggagtggcaaggttaagg 709 Score = 75.8 bits (38), Expect = 1e-10 Identities = 41/42 (97%) Strand = Plus / Plus Query: 491 agagggaaacagcccggatcaccagctaaggcccctaaatga 532 ||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1079 agagggaaacagcccagatcaccagctaaggcccctaaatga 1120
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 309 ggttctccccgaaatgcgttgaggcgcagcagttg 343 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 516 ctaaggcccctaaatgaccgctcagtgat 544 |||||| ||| ||||| ||||||||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgat 657 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 416 aatac 420 ||||| Sbjct: 550 aatac 554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcga 81 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 244 bits (123), Expect = 3e-61 Identities = 262/305 (85%), Gaps = 5/305 (1%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 178 |||||||| || |||| ||||||| || ||||||| ||| || |||| ||||||||| Sbjct: 249 ccggagccaaagggaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaac 308 Query: 179 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 238 | ||||||||| ||||| |||||||||||||||| | | || ||| |||||||||||| Sbjct: 309 cctggtgatctaaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaacc 368 Query: 239 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 298 ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| Sbjct: 369 gactgatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacca 428 Query: 299 agagctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag 356 ||||||||||||||||||||||||| ||| ||||||||| || ||| | | |||| | Sbjct: 429 ggagctagctggttctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctgg 486 Query: 357 -gggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 416 aatac 420 ||||| Sbjct: 547 aatac 551 Score = 89.7 bits (45), Expect = 9e-15 Identities = 81/93 (87%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 516 ctaaggcccctaaatgaccgctcagtgataaag 548 |||||| ||| |||| | ||| |||||||||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaag 658 Score = 77.8 bits (39), Expect = 3e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggca 91 ||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 184 tgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 244 bits (123), Expect = 3e-61 Identities = 267/310 (86%), Gaps = 5/310 (1%) Strand = Plus / Plus Query: 119 ccggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaac 178 |||||||| |||||||||||||||||| | ||| | |||||| ||||||||||||||| Sbjct: 820 ccggagcctaagcgaaagcgagtcttaa-atggct-tcgtcacttcttatggacccgaac 877 Query: 179 ctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaacc 238 | |||||||||| |||| |||||||||| |||| | | || || | |||||||||||| Sbjct: 878 ccgggtgatctaatcatggccaggatgaaatttgggtaacaccaaccggaggtccgaacc 937 Query: 239 gactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaaccc 298 ||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | Sbjct: 938 gaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactc 997 Query: 299 agagctagctggttctccccgaaatgcgttgaggcgcagcagtt--gactggacatctag 356 ||||||||||| ||||||||||||||||||||||||||| ||| || | ||||||| Sbjct: 998 ggagctagctggatctccccgaaatgcgttgaggcgcagcggttaagatttaccatctag 1057 Query: 357 gggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 ||||||||| ||||||||||||||||||||| ||||||||||| ||| ||||||||| | Sbjct: 1058 gggtaaagcgactgtttcggtgcgggctgcgaaagcggtaccaagtcgtggcaaactcag 1117 Query: 416 aatactagat 425 |||||||||| Sbjct: 1118 aatactagat 1127 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 491 agagggaaacagcccggatcaccagctaaggcccctaaatg 531 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatg 1217
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 320614 attaacgctaagtgataaag 320633 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320158 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Minus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 1775855 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 1775796 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 1775795 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 1775736 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 1775735 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 1775676 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 1775675 agctagctggttctccccgaaatacgttgaggcg 1775642 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 376214 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 376273 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 376274 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 376333 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 376334 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 376393 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 376394 agctagctggttctccccgaaatacgttgaggcg 376427 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775922 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 1775466 atcaacactaagtgataaag 1775447 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 529 atgaccgctcagtgataaag 548 || | | || |||||||||| Sbjct: 376603 atcaacactaagtgataaag 376622 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376147 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 3037 attaacgctaagtgataaag 3056 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2581 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 3038 attaacgctaagtgataaag 3057 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2582 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 4137 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 2876 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 2935 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 2936 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 2995 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 2996 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 3055 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 3056 agctagctggttctccccgaaatacgttgaggcg 3089 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2809 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2856 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 3205 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 3264 Query: 529 at 530 || Sbjct: 3265 at 3266 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 3127 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 3177
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 309 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 365 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 366 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 420 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 457 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 516 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 517 taaggcccctaaatga 532 ||||| ||| |||||| Sbjct: 626 taaggtccccaaatga 641 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20299 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 19843 attaacgctaagtgataaag 19824 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2053 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 1597 attaacgctaagtgataaag 1578 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 529 atgaccgctcagtgataaag 548 || | |||| |||||||||| Sbjct: 316103 attaacgctaagtgataaag 316122 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315647 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 370 tttcggtgcgggctgcgcgagcggtaccaaatcga 404 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 416 aatac 420 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 416 aatac 420 ||||| Sbjct: 1049320 aatac 1049316 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659061 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049683 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 516 ctaagg 521 |||||| Sbjct: 1659503 ctaagg 1659508 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 516 ctaagg 521 |||||| Sbjct: 1049241 ctaagg 1049236
>gb|DQ313008.1| Uncultured bacterium clone 3O7D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 242 bits (122), Expect = 1e-60 Identities = 191/214 (89%) Strand = Plus / Plus Query: 121 ggagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 180 |||||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| Sbjct: 486 ggagccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaaccc 545 Query: 181 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 240 |||||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||| Sbjct: 546 gggtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccga 605 Query: 241 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 300 ||| |||||| | ||||||||||| |||||||||||||||||||||| |||||||| | Sbjct: 606 ctggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccgg 665 Query: 301 agctagctggttctccccgaaatgcgttgaggcg 334 ||||||||||||||||||||||| |||||||||| Sbjct: 666 agctagctggttctccccgaaatacgttgaggcg 699 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 419 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 466
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 416 aatac 420 ||||| Sbjct: 1186 aatac 1190 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 823 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 870 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 516 ctaagg 521 |||||| Sbjct: 1265 ctaagg 1270
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 129 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 188 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 189 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 248 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 249 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 308 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 309 ggttctccccgaaatgcgttgaggcg 334 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 416 aatac 420 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 356 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 415 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 416 aatac 420 ||||| Sbjct: 571559 aatac 571563 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Minus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657725 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 49 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||| |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571196 tgacggcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Minus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 516 ctaagg 521 |||||| Sbjct: 2657283 ctaagg 2657278 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 456 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 515 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 516 ctaagg 521 |||||| Sbjct: 571638 ctaagg 571643
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 171 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 230 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 231 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 290 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 291 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 350 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 351 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 409 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 410 actctgaatacta 422 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 47 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 96 |||||| |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1010 tctgactgcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 469 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 528 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 529 at 530 || Sbjct: 1470 at 1471
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 170 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 229 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 230 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 289 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 290 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 349 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 350 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 407 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 408 aaactctgaatactagatatg 428 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 48 ctgaccgcgtgcctgttgaagaatgagccggcgact 83 |||||||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 455 ggccagtgagacgatgggggataagcttcat 485 |||||||||||| ||||||||||||||||| Sbjct: 2988 ggccagtgagacagtgggggataagcttcat 3018
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 238 bits (120), Expect = 2e-59 Identities = 126/128 (98%) Strand = Plus / Plus Query: 421 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 480 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 481 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 540 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 541 tgataaag 548 |||||||| Sbjct: 19152950 tgataaag 19152957 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,238,613 Number of Sequences: 3902068 Number of extensions: 3238613 Number of successful extensions: 64650 Number of sequences better than 10.0: 2714 Number of HSP's better than 10.0 without gapping: 2734 Number of HSP's successfully gapped in prelim test: 16 Number of HSP's that attempted gapping in prelim test: 50104 Number of HSP's gapped (non-prelim): 14018 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)