| Clone Name | basd14g20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_196908.1| Oryza sativa (japonica cultivar-group) putative glutamine synthetase (OSJNBa0071K18.3), mRNA Length = 1780 Score = 640 bits (323), Expect = e-180 Identities = 479/531 (90%) Strand = Plus / Plus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 670 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 729 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 730 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 789 Query: 133 tgaaaaatggggtttgccacccttcaatgattggattgaaggtaccttaccaatagaccc 192 |||||||||||| |||||||| || | ||||||||| || | ||||||||||||||| || Sbjct: 790 tgaaaaatggggattgccaccatttagtgattggatcgatgataccttaccaatagaacc 849 Query: 193 atggtttattggtggacctgtgatcaaaggattcggccgtggttctaaagtactaggaat 252 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 850 atggtttattggtggacctgtgattaaaggatttggccgtggttctaaagtactaggaat 909 Query: 253 accaacagcgaacttggctgcagaaaacttttccgacatactgtcagagcatacatcagg 312 |||||||| ||||| ||||||||||||| |||||| |||| ||||||||||||||||| Sbjct: 910 tccaacagccaacttacctgcagaaaacttctccgacgtactatcagagcatacatcagg 969 Query: 313 tgtatacttcgggtgggctggactttcgaagcgaggcatatacaagatggtcatgagcat 372 |||||||| || |||||||||||||| | |||||| |||| ||||||||||||||||| Sbjct: 970 ggtatactttggctgggctggactttcaacgcgaggtatatttaagatggtcatgagcat 1029 Query: 373 tggctggaacccttactttgataacacagagaagactatcgaaccatggctgcttcatgg 432 ||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||| | Sbjct: 1030 tggctggaacccttattttgataacacggagaagactattgaaccatggttgcttcacga 1089 Query: 433 ttttgatgaggacttctatggagaggagctgcgccttgttattgttgggtacatacgacc 492 ||||| ||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1090 ttttggtgaagacttttacggagaggagctgcgccttgttattgttggttacatacgacc 1149 Query: 493 cgaggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 1150 cgaggccaactttccttcacttgagagcttgatagagaggattcacgagga 1200
>gb|AY332469.1| Oryza sativa (japonica cultivar-group) GS1-like protein (GLN) mRNA, complete cds Length = 1428 Score = 640 bits (323), Expect = e-180 Identities = 479/531 (90%) Strand = Plus / Plus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 596 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 655 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 656 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 715 Query: 133 tgaaaaatggggtttgccacccttcaatgattggattgaaggtaccttaccaatagaccc 192 |||||||||||| |||||||| || | ||||||||| || | ||||||||||||||| || Sbjct: 716 tgaaaaatggggattgccaccatttagtgattggatcgatgataccttaccaatagaacc 775 Query: 193 atggtttattggtggacctgtgatcaaaggattcggccgtggttctaaagtactaggaat 252 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 776 atggtttattggtggacctgtgattaaaggatttggccgtggttctaaagtactaggaat 835 Query: 253 accaacagcgaacttggctgcagaaaacttttccgacatactgtcagagcatacatcagg 312 |||||||| ||||| ||||||||||||| |||||| |||| ||||||||||||||||| Sbjct: 836 tccaacagccaacttacctgcagaaaacttctccgacgtactatcagagcatacatcagg 895 Query: 313 tgtatacttcgggtgggctggactttcgaagcgaggcatatacaagatggtcatgagcat 372 |||||||| || |||||||||||||| | |||||| |||| ||||||||||||||||| Sbjct: 896 ggtatactttggctgggctggactttcaacgcgaggtatatttaagatggtcatgagcat 955 Query: 373 tggctggaacccttactttgataacacagagaagactatcgaaccatggctgcttcatgg 432 ||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||| | Sbjct: 956 tggctggaacccttattttgataacacggagaagactattgaaccatggttgcttcacga 1015 Query: 433 ttttgatgaggacttctatggagaggagctgcgccttgttattgttgggtacatacgacc 492 ||||| ||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1016 ttttggtgaagacttttacggagaggagctgcgccttgttattgttggttacatacgacc 1075 Query: 493 cgaggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 1076 cgaggccaactttccttcacttgagagcttgatagagaggattcacgagga 1126
>dbj|AK066663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071M21, full insert sequence Length = 1894 Score = 640 bits (323), Expect = e-180 Identities = 479/531 (90%) Strand = Plus / Plus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 721 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 780 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 781 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 840 Query: 133 tgaaaaatggggtttgccacccttcaatgattggattgaaggtaccttaccaatagaccc 192 |||||||||||| |||||||| || | ||||||||| || | ||||||||||||||| || Sbjct: 841 tgaaaaatggggattgccaccatttagtgattggatcgatgataccttaccaatagaacc 900 Query: 193 atggtttattggtggacctgtgatcaaaggattcggccgtggttctaaagtactaggaat 252 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 901 atggtttattggtggacctgtgattaaaggatttggccgtggttctaaagtactaggaat 960 Query: 253 accaacagcgaacttggctgcagaaaacttttccgacatactgtcagagcatacatcagg 312 |||||||| ||||| ||||||||||||| |||||| |||| ||||||||||||||||| Sbjct: 961 tccaacagccaacttacctgcagaaaacttctccgacgtactatcagagcatacatcagg 1020 Query: 313 tgtatacttcgggtgggctggactttcgaagcgaggcatatacaagatggtcatgagcat 372 |||||||| || |||||||||||||| | |||||| |||| ||||||||||||||||| Sbjct: 1021 ggtatactttggctgggctggactttcaacgcgaggtatatttaagatggtcatgagcat 1080 Query: 373 tggctggaacccttactttgataacacagagaagactatcgaaccatggctgcttcatgg 432 ||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||| | Sbjct: 1081 tggctggaacccttattttgataacacggagaagactattgaaccatggttgcttcacga 1140 Query: 433 ttttgatgaggacttctatggagaggagctgcgccttgttattgttgggtacatacgacc 492 ||||| ||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1141 ttttggtgaagacttttacggagaggagctgcgccttgttattgttggttacatacgacc 1200 Query: 493 cgaggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 1201 cgaggccaactttccttcacttgagagcttgatagagaggattcacgagga 1251
>dbj|AK062574.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-A01, full insert sequence Length = 1582 Score = 640 bits (323), Expect = e-180 Identities = 479/531 (90%) Strand = Plus / Plus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 735 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 794 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 795 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 854 Query: 133 tgaaaaatggggtttgccacccttcaatgattggattgaaggtaccttaccaatagaccc 192 |||||||||||| |||||||| || | ||||||||| || | ||||||||||||||| || Sbjct: 855 tgaaaaatggggattgccaccatttagtgattggatcgatgataccttaccaatagaacc 914 Query: 193 atggtttattggtggacctgtgatcaaaggattcggccgtggttctaaagtactaggaat 252 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 915 atggtttattggtggacctgtgattaaaggatttggccgtggttctaaagtactaggaat 974 Query: 253 accaacagcgaacttggctgcagaaaacttttccgacatactgtcagagcatacatcagg 312 |||||||| ||||| ||||||||||||| |||||| |||| ||||||||||||||||| Sbjct: 975 tccaacagccaacttacctgcagaaaacttctccgacgtactatcagagcatacatcagg 1034 Query: 313 tgtatacttcgggtgggctggactttcgaagcgaggcatatacaagatggtcatgagcat 372 |||||||| || |||||||||||||| | |||||| |||| ||||||||||||||||| Sbjct: 1035 ggtatactttggctgggctggactttcaacgcgaggtatatttaagatggtcatgagcat 1094 Query: 373 tggctggaacccttactttgataacacagagaagactatcgaaccatggctgcttcatgg 432 ||||||||||||||| ||||||||||| ||||||||||| ||||||||| ||||||| | Sbjct: 1095 tggctggaacccttattttgataacacggagaagactattgaaccatggttgcttcacga 1154 Query: 433 ttttgatgaggacttctatggagaggagctgcgccttgttattgttgggtacatacgacc 492 ||||| ||| ||||| || ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1155 ttttggtgaagacttttacggagaggagctgcgccttgttattgttggttacatacgacc 1214 Query: 493 cgaggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 1215 cgaggccaactttccttcacttgagagcttgatagagaggattcacgagga 1265
>ref|NM_195506.1| Oryza sativa (japonica cultivar-group) putative Riboflavin biosynthesis protein ribF (OSJNBa0082N11.3), mRNA Length = 990 Score = 605 bits (305), Expect = e-170 Identities = 468/521 (89%), Gaps = 1/521 (0%) Strand = Plus / Plus Query: 23 gctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaaaaggaccgat 82 ||||| |||||||||||||||||||| || ||||| |||||||| ||||||||||| | | Sbjct: 341 gctggaaaagctgcaggaatgcatgt-atagctgtaccttcagtccccaaaaggactgct 399 Query: 83 gaattcagttctgctgatgagattatcaactccctccttgacttaaagcctgaaaaatgg 142 ||||||||||||||||||||| | ||||| |||||||||||| ||| ||||||||||||| Sbjct: 400 gaattcagttctgctgatgaggtgatcaattccctccttgacgtaaggcctgaaaaatgg 459 Query: 143 ggtttgccacccttcaatgattggattgaaggtaccttaccaatagacccatggtttatt 202 || |||| || || | |||||||||||| | ||||||||||||||| ||||||||||| Sbjct: 460 ggattgcggccatttagtgattggattgatgataccttaccaatagaaccatggtttata 519 Query: 203 ggtggacctgtgatcaaaggattcggccgtggttctaaagtactaggaataccaacagcg 262 |||||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 520 ggtggatctgtgattaaaggattcggccgtggttctaaagtactaggaattccaacagcc 579 Query: 263 aacttggctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttc 322 ||||| |||||||||||||||||||| |||| ||||||||||||||| | |||||||| Sbjct: 580 aacttacctgcagaaaacttttccgacgtactatcagagcatacatcaagggtatacttt 639 Query: 323 gggtgggctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaac 382 || |||||||||||||| | |||||| ||||| |||||||||||||||||||| |||||| Sbjct: 640 ggctgggctggactttcaacgcgaggtatatataagatggtcatgagcattgggtggaac 699 Query: 383 ccttactttgataacacagagaagactatcgaaccatggctgcttcatggttttgatgag 442 ||||| ||||||||||| ||||||||||| ||||||||| ||||||| | ||||| ||| Sbjct: 700 ccttattttgataacacggagaagactattgaaccatggttgcttcacgattttggtgaa 759 Query: 443 gacttctatggagaggagctgcgccttgttattgttgggtacatacgacccgaggcaaac 502 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 760 gacttttatggagaggagctgcgccttgttattgttggttacatacgacccgaggccaac 819 Query: 503 tttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||||||| || |||||||||||||| |||||||||||||| Sbjct: 820 tttccttcactagagagcttgatagagaggattcacgagga 860
>gb|AC027038.12| Oryza sativa chromosome 10 BAC OSJNBa0071K18 genomic sequence, complete sequence Length = 149758 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Plus Query: 270 ctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttcgggtggg 329 ||||||||||||| |||||| |||| ||||||||||||||||| |||||||| || |||| Sbjct: 40168 ctgcagaaaacttctccgacgtactatcagagcatacatcaggggtatactttggctggg 40227 Query: 330 ctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaacccttact 389 |||||||||| | |||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 40228 ctggactttcaacgcgaggtatatttaagatggtcatgagcattggctggaacccttatt 40287 Query: 390 ttgataacacagagaagactat 411 |||||||||| ||||||||||| Sbjct: 40288 ttgataacacggagaagactat 40309 Score = 176 bits (89), Expect = 6e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 39618 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 39677 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 39678 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 39737 Query: 133 tgaaaaatggggtttgccacc 153 |||||||||||| |||||||| Sbjct: 39738 tgaaaaatggggattgccacc 39758 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Plus Query: 175 taccttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtgg 234 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 39861 taccttaccaatagaaccatggtttattggtggacctgtgattaaaggatttggccgtgg 39920 Query: 235 ttctaaagtactaggaataccaacag 260 |||||||||||||||||| ||||||| Sbjct: 39921 ttctaaagtactaggaattccaacag 39946 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||| | ||||| ||| ||||| || ||||||||||||||||||||| Sbjct: 40389 gaaccatggttgcttcacgattttggtgaagacttttacggagaggagctgcgccttgtt 40448 Query: 473 attgttgggtacatacgacccgagg 497 |||||||| |||||||||||||||| Sbjct: 40449 attgttggttacatacgacccgagg 40473 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 495 aggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 40565 aggccaactttccttcacttgagagcttgatagagaggattcacgagga 40613
>gb|AC091735.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0082N11, from chromosome 10, complete sequence Length = 183345 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 270 ctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttcgggtggg 329 |||||||||||||||||||| |||| ||||||||||||||| | |||||||| || |||| Sbjct: 6865 ctgcagaaaacttttccgacgtactatcagagcatacatcaagggtatactttggctggg 6806 Query: 330 ctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaacccttact 389 |||||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||| | Sbjct: 6805 ctggactttcaacgcgaggtatatataagatggtcatgagcattgggtggaacccttatt 6746 Query: 390 ttgataacacagagaagactat 411 |||||||||| ||||||||||| Sbjct: 6745 ttgataacacggagaagactat 6724 Score = 145 bits (73), Expect = 2e-31 Identities = 122/137 (89%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| |||||||||||||||||||| || ||||| |||||||| ||||| Sbjct: 7420 aggtgttgcagctggaaaagctgcaggaatgcatgt-atagctgtaccttcagtccccaa 7362 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 7361 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaggcc 7302 Query: 133 tgaaaaatggggtttgc 149 |||||||||||| |||| Sbjct: 7301 tgaaaaatggggattgc 7285 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Minus Query: 165 ggattgaaggtaccttaccaatagacccatggtttattggtggacctgtgatcaaaggat 224 ||||||| | ||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 7188 ggattgatgataccttaccaatagaaccatggtttataggtggatctgtgattaaaggat 7129 Query: 225 tcggccgtggttctaaagtactaggaataccaacag 260 |||||||||||||||||||||||||||| ||||||| Sbjct: 7128 tcggccgtggttctaaagtactaggaattccaacag 7093 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||| | ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 6644 gaaccatggttgcttcacgattttggtgaagacttttatggagaggagctgcgccttgtt 6585 Query: 473 attgttgggtacatacgacccgagg 497 |||||||| |||||||||||||||| Sbjct: 6584 attgttggttacatacgacccgagg 6560 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 495 aggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 6467 aggccaactttccttcactagagagcttgatagagaggattcacgagga 6419
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 270 ctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttcgggtggg 329 ||||||||||||| |||||| |||| ||||||||||||||||| |||||||| || |||| Sbjct: 16620074 ctgcagaaaacttctccgacgtactatcagagcatacatcaggggtatactttggctggg 16620015 Query: 330 ctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaacccttact 389 |||||||||| | |||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 16620014 ctggactttcaacgcgaggtatatttaagatggtcatgagcattggctggaacccttatt 16619955 Query: 390 ttgataacacagagaagactat 411 |||||||||| ||||||||||| Sbjct: 16619954 ttgataacacggagaagactat 16619933 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 270 ctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttcgggtggg 329 |||||||||||||||||||| |||| ||||||||||||||| | |||||||| || |||| Sbjct: 7373001 ctgcagaaaacttttccgacgtactatcagagcatacatcaagggtatactttggctggg 7372942 Query: 330 ctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaacccttact 389 |||||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||| | Sbjct: 7372941 ctggactttcaacgcgaggtatatataagatggtcatgagcattgggtggaacccttatt 7372882 Query: 390 ttgataacacagagaagactat 411 |||||||||| ||||||||||| Sbjct: 7372881 ttgataacacggagaagactat 7372860 Score = 176 bits (89), Expect = 6e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 16620624 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 16620565 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 16620564 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 16620505 Query: 133 tgaaaaatggggtttgccacc 153 |||||||||||| |||||||| Sbjct: 16620504 tgaaaaatggggattgccacc 16620484 Score = 145 bits (73), Expect = 2e-31 Identities = 122/137 (89%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| |||||||||||||||||||| || ||||| |||||||| ||||| Sbjct: 7373556 aggtgttgcagctggaaaagctgcaggaatgcatgt-atagctgtaccttcagtccccaa 7373498 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 7373497 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaggcc 7373438 Query: 133 tgaaaaatggggtttgc 149 |||||||||||| |||| Sbjct: 7373437 tgaaaaatggggattgc 7373421 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 175 taccttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtgg 234 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 16620381 taccttaccaatagaaccatggtttattggtggacctgtgattaaaggatttggccgtgg 16620322 Query: 235 ttctaaagtactaggaataccaacag 260 |||||||||||||||||| ||||||| Sbjct: 16620321 ttctaaagtactaggaattccaacag 16620296 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Minus Query: 165 ggattgaaggtaccttaccaatagacccatggtttattggtggacctgtgatcaaaggat 224 ||||||| | ||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 7373324 ggattgatgataccttaccaatagaaccatggtttataggtggatctgtgattaaaggat 7373265 Query: 225 tcggccgtggttctaaagtactaggaataccaacag 260 |||||||||||||||||||||||||||| ||||||| Sbjct: 7373264 tcggccgtggttctaaagtactaggaattccaacag 7373229 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||| | ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 7372780 gaaccatggttgcttcacgattttggtgaagacttttatggagaggagctgcgccttgtt 7372721 Query: 473 attgttgggtacatacgacccgagg 497 |||||||| |||||||||||||||| Sbjct: 7372720 attgttggttacatacgacccgagg 7372696 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||| | ||||| ||| ||||| || ||||||||||||||||||||| Sbjct: 16619853 gaaccatggttgcttcacgattttggtgaagacttttacggagaggagctgcgccttgtt 16619794 Query: 473 attgttgggtacatacgacccgagg 497 |||||||| |||||||||||||||| Sbjct: 16619793 attgttggttacatacgacccgagg 16619769 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 495 aggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 16619677 aggccaactttccttcacttgagagcttgatagagaggattcacgagga 16619629 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 495 aggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 7372603 aggccaactttccttcactagagagcttgatagagaggattcacgagga 7372555
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 270 ctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttcgggtggg 329 ||||||||||||| |||||| |||| ||||||||||||||||| |||||||| || |||| Sbjct: 16628315 ctgcagaaaacttctccgacgtactatcagagcatacatcaggggtatactttggctggg 16628256 Query: 330 ctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaacccttact 389 |||||||||| | |||||| |||| |||||||||||||||||||||||||||||||| | Sbjct: 16628255 ctggactttcaacgcgaggtatatttaagatggtcatgagcattggctggaacccttatt 16628196 Query: 390 ttgataacacagagaagactat 411 |||||||||| ||||||||||| Sbjct: 16628195 ttgataacacggagaagactat 16628174 Score = 178 bits (90), Expect = 1e-41 Identities = 129/142 (90%) Strand = Plus / Minus Query: 270 ctgcagaaaacttttccgacatactgtcagagcatacatcaggtgtatacttcgggtggg 329 |||||||||||||||||||| |||| ||||||||||||||| | |||||||| || |||| Sbjct: 7377200 ctgcagaaaacttttccgacgtactatcagagcatacatcaagggtatactttggctggg 7377141 Query: 330 ctggactttcgaagcgaggcatatacaagatggtcatgagcattggctggaacccttact 389 |||||||||| | |||||| ||||| |||||||||||||||||||| ||||||||||| | Sbjct: 7377140 ctggactttcaacgcgaggtatatataagatggtcatgagcattgggtggaacccttatt 7377081 Query: 390 ttgataacacagagaagactat 411 |||||||||| ||||||||||| Sbjct: 7377080 ttgataacacggagaagactat 7377059 Score = 176 bits (89), Expect = 6e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| ||||||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 16628865 aggtgttgcagctggaaaagctgcaggaatgcatgtcatagctgtaccttcagtccccaa 16628806 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||||||| Sbjct: 16628805 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaagcc 16628746 Query: 133 tgaaaaatggggtttgccacc 153 |||||||||||| |||||||| Sbjct: 16628745 tgaaaaatggggattgccacc 16628725 Score = 145 bits (73), Expect = 2e-31 Identities = 122/137 (89%), Gaps = 1/137 (0%) Strand = Plus / Minus Query: 13 aggtgttacggctggcaaagctgcaggaatgcatgtcattgctgtcccttcagtacccaa 72 ||||||| | ||||| |||||||||||||||||||| || ||||| |||||||| ||||| Sbjct: 7377755 aggtgttgcagctggaaaagctgcaggaatgcatgt-atagctgtaccttcagtccccaa 7377697 Query: 73 aaggaccgatgaattcagttctgctgatgagattatcaactccctccttgacttaaagcc 132 |||||| | |||||||||||||||||||||| | ||||| |||||||||||| ||| ||| Sbjct: 7377696 aaggactgctgaattcagttctgctgatgaggtgatcaattccctccttgacgtaaggcc 7377637 Query: 133 tgaaaaatggggtttgc 149 |||||||||||| |||| Sbjct: 7377636 tgaaaaatggggattgc 7377620 Score = 139 bits (70), Expect = 1e-29 Identities = 82/86 (95%) Strand = Plus / Minus Query: 175 taccttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtgg 234 ||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||| Sbjct: 16628622 taccttaccaatagaaccatggtttattggtggacctgtgattaaaggatttggccgtgg 16628563 Query: 235 ttctaaagtactaggaataccaacag 260 |||||||||||||||||| ||||||| Sbjct: 16628562 ttctaaagtactaggaattccaacag 16628537 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Minus Query: 165 ggattgaaggtaccttaccaatagacccatggtttattggtggacctgtgatcaaaggat 224 ||||||| | ||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 7377523 ggattgatgataccttaccaatagaaccatggtttataggtggatctgtgattaaaggat 7377464 Query: 225 tcggccgtggttctaaagtactaggaataccaacag 260 |||||||||||||||||||||||||||| ||||||| Sbjct: 7377463 tcggccgtggttctaaagtactaggaattccaacag 7377428 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Minus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||| | ||||| ||| ||||| |||||||||||||||||||||||| Sbjct: 7376979 gaaccatggttgcttcacgattttggtgaagacttttatggagaggagctgcgccttgtt 7376920 Query: 473 attgttgggtacatacgacccgagg 497 |||||||| |||||||||||||||| Sbjct: 7376919 attgttggttacatacgacccgagg 7376895 Score = 105 bits (53), Expect = 2e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||| | ||||| ||| ||||| || ||||||||||||||||||||| Sbjct: 16628094 gaaccatggttgcttcacgattttggtgaagacttttacggagaggagctgcgccttgtt 16628035 Query: 473 attgttgggtacatacgacccgagg 497 |||||||| |||||||||||||||| Sbjct: 16628034 attgttggttacatacgacccgagg 16628010 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 495 aggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 16627918 aggccaactttccttcacttgagagcttgatagagaggattcacgagga 16627870 Score = 65.9 bits (33), Expect = 2e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 495 aggcaaactttccttcgctcgagagcttgatagaaaggattcacgagga 543 |||| ||||||||||| || |||||||||||||| |||||||||||||| Sbjct: 7376802 aggccaactttccttcactagagagcttgatagagaggattcacgagga 7376754
>gb|BT014255.1| Lycopersicon esculentum clone 133457R, mRNA sequence Length = 1613 Score = 89.7 bits (45), Expect = 1e-14 Identities = 126/153 (82%) Strand = Plus / Plus Query: 353 tacaagatggtcatgagcattggctggaacccttactttgataacacagagaagactatc 412 ||||||||||||||||||||||| ||||| |||| ||| | || ||||||||||| | Sbjct: 993 tacaagatggtcatgagcattggttggaatcctttcttcaacaatacagagaagacggtt 1052 Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||| ||||||||| || |||||||||||||||| ||||| ||| || ||| Sbjct: 1053 gaaccatggttgcttcatgacttcaatgaggacttctatggtgaggaattgcatctagtt 1112 Query: 473 attgttgggtacatacgacccgaggcaaacttt 505 |||| || |||||||| || ||||| |||||| Sbjct: 1113 gttgtgggctacatacggccggaggccaacttt 1145
>ref|NM_118267.3| Arabidopsis thaliana catalytic/ hydrolase/ riboflavin kinase AT4G21470 mRNA, complete cds Length = 1424 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaacccttactttgataacacagagaagactatcgaacca 418 ||||||||||||||||| ||||| ||||| || |||||| ||||| ||||| |||||| Sbjct: 1040 atggtcatgagcattggttggaatccttatttcaataacaaggagaaaactattgaacca 1099 Query: 419 tggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgttattgtt 478 ||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| |||| ||| Sbjct: 1100 tggctgcttcacgatttcactgaggatttctacggagaagagctacgtcttattatcgtt 1159 Query: 479 gggtacatacgacccgaggc 498 || || ||||| || ||||| Sbjct: 1160 ggctatatacgccctgaggc 1179 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 860 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 919 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 920 aaagtactcggaat 933
>gb|BT006373.1| Arabidopsis thaliana At4g21470 gene, complete cds Length = 1140 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaacccttactttgataacacagagaagactatcgaacca 418 ||||||||||||||||| ||||| ||||| || |||||| ||||| ||||| |||||| Sbjct: 880 atggtcatgagcattggttggaatccttatttcaataacaaggagaaaactattgaacca 939 Query: 419 tggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgttattgtt 478 ||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| |||| ||| Sbjct: 940 tggctgcttcacgatttcactgaggatttctacggagaagagctacgtcttattatcgtt 999 Query: 479 gggtacatacgacccgaggc 498 || || ||||| || ||||| Sbjct: 1000 ggctatatacgccctgaggc 1019 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 700 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 759 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 760 aaagtactcggaat 773
>emb|BX827404.1|CNS0A2UP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZF09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaacccttactttgataacacagagaagactatcgaacca 418 ||||||||||||||||| ||||| ||||| || |||||| ||||| ||||| |||||| Sbjct: 1004 atggtcatgagcattggttggaatccttatttcaataacaaggagaaaactattgaacca 1063 Query: 419 tggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgttattgtt 478 ||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| |||| ||| Sbjct: 1064 tggctgcttcacgatttcactgaggatttctacggagaagagctacgtcttattatcgtt 1123 Query: 479 gggtacatacgacccgaggc 498 || || ||||| || ||||| Sbjct: 1124 ggctatatacgccctgaggc 1143 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 825 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 884 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 885 aaagtactcggaat 898
>emb|BX828729.1|CNS0A2KP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1340 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaacccttactttgataacacagagaagactatcgaacca 418 ||||||||||||||||| ||||| ||||| || |||||| ||||| ||||| |||||| Sbjct: 1039 atggtcatgagcattggttggaatccttatttcaataacaaggagaaaactattgaacca 1098 Query: 419 tggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgttattgtt 478 | ||||||||| | |||| |||||| ||||| ||||| ||||| || ||| |||| ||| Sbjct: 1099 ttgctgcttcacgattttactgaggatttctacggagaagagctacgtcttattatcgtt 1158 Query: 479 gggtacatacgacccgaggc 498 || || ||||| || ||||| Sbjct: 1159 ggctatatacgccctgaggc 1178 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 860 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 919 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 920 aaagtactcggaat 933
>gb|AY878327.1| Arabidopsis thaliana riboflavin kinase/FMN hydrolase mRNA, complete cds Length = 1140 Score = 79.8 bits (40), Expect = 1e-11 Identities = 115/140 (82%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaacccttactttgataacacagagaagactatcgaacca 418 ||||||||||||||||| ||||| ||||| || |||||| ||||| ||||| |||||| Sbjct: 880 atggtcatgagcattggttggaatccttatttcaataacaaggagaaaactattgaacca 939 Query: 419 tggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgttattgtt 478 ||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| |||| ||| Sbjct: 940 tggctgcttcacgatttcactgaggatttctacggagaagagctacgtcttattatcgtt 999 Query: 479 gggtacatacgacccgaggc 498 || || ||||| || ||||| Sbjct: 1000 ggctatatacgccctgaggc 1019 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 700 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 759 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 760 aaagtactcggaat 773
>emb|BX571947.8| Zebrafish DNA sequence from clone DKEY-162F21 in linkage group 10, complete sequence Length = 269153 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 354 acaagatggtcatgagcattggctggaacccttact 389 |||||||||| ||||||||||||||||||||||||| Sbjct: 19585 acaagatggtaatgagcattggctggaacccttact 19550
>ref|XM_684315.1| PREDICTED: Danio rerio similar to riboflavin kinase (LOC560915), mRNA Length = 489 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 354 acaagatggtcatgagcattggctggaacccttact 389 |||||||||| ||||||||||||||||||||||||| Sbjct: 173 acaagatggtaatgagcattggctggaacccttact 208
>emb|AL161555.2|ATCHRIV55 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 55 Length = 194916 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 50370 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 50429 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 50430 aaagtactcggaat 50443 Score = 42.1 bits (21), Expect = 2.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| || Sbjct: 50765 gaaccatggctgcttcacgatttcactgaggatttctacggagaagagctacgtcttatt 50824 Query: 473 attgttgggtacatacg 489 || ||||| || ||||| Sbjct: 50825 atcgttggctatatacg 50841 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaaccctta 387 ||||||||||||||||| ||||| ||||| Sbjct: 50637 atggtcatgagcattggttggaatcctta 50665
>emb|AL022603.1|ATF18E5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18E5 (ESSAII project) Length = 95266 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 37362 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 37421 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 37422 aaagtactcggaat 37435 Score = 42.1 bits (21), Expect = 2.2 Identities = 63/77 (81%) Strand = Plus / Plus Query: 413 gaaccatggctgcttcatggttttgatgaggacttctatggagaggagctgcgccttgtt 472 ||||||||||||||||| | ||| |||||| ||||| ||||| ||||| || ||| || Sbjct: 37757 gaaccatggctgcttcacgatttcactgaggatttctacggagaagagctacgtcttatt 37816 Query: 473 attgttgggtacatacg 489 || ||||| || ||||| Sbjct: 37817 atcgttggctatatacg 37833 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaaccctta 387 ||||||||||||||||| ||||| ||||| Sbjct: 37629 atggtcatgagcattggttggaatcctta 37657
>emb|BX828067.1|CNS0A2ZR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZC04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1315 Score = 60.0 bits (30), Expect = 9e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 179 ttaccaatagacccatggtttattggtggacctgtgatcaaaggattcggccgtggttct 238 |||||||| || |||||| |||||| || || || ||||||||||| |||||||| ||| Sbjct: 847 ttaccaattgatccatggcatattggaggtccagtcatcaaaggatttggccgtggctct 906 Query: 239 aaagtactaggaat 252 |||||||| ||||| Sbjct: 907 aaagtactcggaat 920 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/104 (81%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaacccttactttgataacacagagaagactatcgaacca 418 ||||||||||||||||| ||||| ||| | | |||||| ||||| ||||| |||||| Sbjct: 1027 atggtcatgagcattggttggaatcctcatctcaataacaaggagaaaactattgaacca 1086 Query: 419 tggctgcttcatggttttgatgaggacttctatggagaggagct 462 ||||||||||| | ||| |||||| ||||| ||||| ||||| Sbjct: 1087 tggctgcttcacgatttcactgaggatttctacggagaagagct 1130
>gb|AY815798.1| Schistosoma japonicum SJCHGC02943 protein mRNA, complete cds Length = 575 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 353 tacaagatggtcatgagcattggctggaacccttacttt 391 ||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 229 tacaaaatggttatgagcattggctggaatccttacttt 267
>gb|AY812018.1| Schistosoma japonicum SJCHGC04098 protein mRNA, partial cds Length = 705 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 353 tacaagatggtcatgagcattggctggaacccttacttt 391 ||||| ||||| ||||||||||||||||| ||||||||| Sbjct: 284 tacaaaatggttatgagcattggctggaatccttacttt 322
>gb|BC079807.1| Xenopus laevis MGC86418 protein, mRNA (cDNA clone MGC:86418 IMAGE:7011809), complete cds Length = 1009 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 353 tacaagatggtcatgagcattggctggaaccctt 386 ||||||||||||||||| ||||||||||| |||| Sbjct: 371 tacaagatggtcatgagtattggctggaatcctt 404
>gb|BC108783.1| Xenopus laevis cDNA clone MGC:132107 IMAGE:6955603, complete cds Length = 2281 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 353 tacaagatggtcatgagcattggctggaaccctt 386 ||||| ||||||||||| ||||||||||| |||| Sbjct: 389 tacaaaatggtcatgagtattggctggaatcctt 422
>gb|BC046843.1| Xenopus laevis hypothetical protein MGC52924, mRNA (cDNA clone MGC:52924 IMAGE:4889702), complete cds Length = 2184 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Plus Query: 353 tacaagatggtcatgagcattggctggaaccctt 386 ||||| ||||||||||| ||||||||||| |||| Sbjct: 308 tacaaaatggtcatgagtattggctggaatcctt 341
>emb|Z98560.1|SPAC4C5 S.pombe chromosome I cosmid c4C5 Length = 15500 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 gctgcaggaatgcatgtcatt 52 ||||||||||||||||||||| Sbjct: 2287 gctgcaggaatgcatgtcatt 2307
>ref|NM_001016959.2| Xenopus tropicalis riboflavin kinase (rfk), mRNA Length = 929 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 acaagatggtcatgagcattggctggaaccctt 386 |||||||||| ||||| ||||||||||| |||| Sbjct: 440 acaagatggttatgagtattggctggaatcctt 472
>gb|AC090340.6| Homo sapiens chromosome 18, clone RP11-714M23, complete sequence Length = 170969 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 388 ctttgataacacagagaagac 408 ||||||||||||||||||||| Sbjct: 77295 ctttgataacacagagaagac 77275
>ref|NM_001018645.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC4C5.01), partial mRNA Length = 741 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 32 gctgcaggaatgcatgtcatt 52 ||||||||||||||||||||| Sbjct: 583 gctgcaggaatgcatgtcatt 603
>gb|AC007103.4|AC007103 Homo sapiens chromosome 4 clone C0190D22 map 4p16, complete sequence Length = 181571 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 aaccatggctgcttcatggtt 434 ||||||||||||||||||||| Sbjct: 86822 aaccatggctgcttcatggtt 86802
>emb|CR761430.2| Xenopus tropicalis finished cDNA, clone TEgg050p12 Length = 929 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 354 acaagatggtcatgagcattggctggaaccctt 386 |||||||||| ||||| ||||||||||| |||| Sbjct: 440 acaagatggttatgagtattggctggaatcctt 472
>gb|BC069227.1| Homo sapiens tripartite motif-containing 11, mRNA (cDNA clone MGC:78395 IMAGE:4875080), complete cds Length = 2725 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 2034 ggctggcaaagctgcaggaa 2015
>ref|XM_755394.1| Ustilago maydis 521 hypothetical protein (UM04340.1) partial mRNA Length = 1254 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 359 atggtcatgagcattggctggaaccctt 386 |||||||||||| |||||||||| |||| Sbjct: 592 atggtcatgagcgttggctggaatcctt 619
>gb|AC163242.3| Callicebus moloch clone LB5-73P23, complete sequence Length = 101102 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ttctaaagtactaggaatac 254 |||||||||||||||||||| Sbjct: 59311 ttctaaagtactaggaatac 59330
>gb|BC011629.2| Homo sapiens tripartite motif-containing 11, mRNA (cDNA clone IMAGE:3957038), complete cds Length = 1812 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 1135 ggctggcaaagctgcaggaa 1116
>gb|AC159816.2| Mus musculus BAC clone RP23-321A19 from chromosome 9, complete sequence Length = 191274 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 cttgttattgttgggtacat 486 |||||||||||||||||||| Sbjct: 107645 cttgttattgttgggtacat 107664
>emb|AL670729.19| Human DNA sequence from clone RP11-245P10 on chromosome 1 Contains the 3' end of the OBSCN gene for obscurin cytoskeletal calmodulin and titin-interacting RhoGEF protein, a novel protein, the TRIM11 gene for tripartite motif-containing 11 protein, the 5' end of a novel transcript, the 3' end of the TRIM17 gene for tripartite motif-containing 17 protein and three CpG islands, complete sequence Length = 62164 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 47687 ggctggcaaagctgcaggaa 47706
>ref|XM_784600.1| PREDICTED: Strongylocentrotus purpuratus similar to riboflavin kinase (LOC584749), mRNA Length = 459 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 acaagatggtcatgagcattggctggaa 381 |||||||||| ||||| ||||||||||| Sbjct: 179 acaagatggtgatgagtattggctggaa 206
>emb|BX248243.23| Zebrafish DNA sequence from clone CH211-225L7 in linkage group 7, complete sequence Length = 161572 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 taaagcctgaaaaatggggtttgc 149 ||||||||||||||||| |||||| Sbjct: 102615 taaagcctgaaaaatggagtttgc 102638
>gb|AF327056.1| Homo sapiens BIA1 protein mRNA, complete cds Length = 2714 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 2042 ggctggcaaagctgcaggaa 2023
>ref|NM_145214.2| Homo sapiens tripartite motif-containing 11 (TRIM11), mRNA Length = 2715 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 2043 ggctggcaaagctgcaggaa 2024
>dbj|AK097825.1| Homo sapiens cDNA FLJ40506 fis, clone TESTI2045611, weakly similar to 52 KDA RO PROTEIN Length = 2218 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 1572 ggctggcaaagctgcaggaa 1553
>gb|AC007976.4| Drosophila melanogaster, chromosome 2L, region 22C-22D, BAC clone BACR01K07, complete sequence Length = 175867 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cagttctgctgatgagatta 107 |||||||||||||||||||| Sbjct: 41484 cagttctgctgatgagatta 41465
>gb|AC022880.10| Homo sapiens chromosome , clone RP11-436P7, complete sequence Length = 166306 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 aaccatggctgcttcatggt 433 |||||||||||||||||||| Sbjct: 144472 aaccatggctgcttcatggt 144453
>gb|AC022690.6| Homo sapiens chromosome 8, clone RP11-480O10, complete sequence Length = 178316 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 aaccatggctgcttcatggt 433 |||||||||||||||||||| Sbjct: 170922 aaccatggctgcttcatggt 170941
>gb|AF220125.1|AF220125 Homo sapiens tripartite motif protein TRIM11 (TRIM11) mRNA, partial cds Length = 1280 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 608 ggctggcaaagctgcaggaa 589
>gb|AC010329.3|AC010329 Homo sapiens chromosome 19 clone CTD-2626G11, complete sequence Length = 187607 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 413 gaaccatggctgcttcatggtttt 436 |||||||| ||||||||||||||| Sbjct: 137562 gaaccatgactgcttcatggtttt 137539
>gb|AE003584.5| Drosophila melanogaster chromosome 2L, section 7 of 83 of the complete sequence Length = 346734 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 cagttctgctgatgagatta 107 |||||||||||||||||||| Sbjct: 242675 cagttctgctgatgagatta 242656
>emb|CT030158.4| M.truncatula DNA sequence from clone MTH2-49E10 on chromosome 3, complete sequence Length = 122591 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 433 ttttgatgaggacttctatg 452 |||||||||||||||||||| Sbjct: 32143 ttttgatgaggacttctatg 32162
>gb|DP000019.1| Callicebus moloch target 1 genomic scaffold Length = 2105003 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ttctaaagtactaggaatac 254 |||||||||||||||||||| Sbjct: 875565 ttctaaagtactaggaatac 875584
>emb|AL360165.1|HST000222 Homo sapiens mRNA full length insert cDNA clone EUROIMAGE 24843 Length = 1246 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 ggctggcaaagctgcaggaa 41 |||||||||||||||||||| Sbjct: 574 ggctggcaaagctgcaggaa 555 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,560,737 Number of Sequences: 3902068 Number of extensions: 4560737 Number of successful extensions: 80075 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 53 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79874 Number of HSP's gapped (non-prelim): 196 length of query: 630 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 607 effective length of database: 17,143,297,704 effective search space: 10405981706328 effective search space used: 10405981706328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)