| Clone Name | basd14g11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 446 cattgatggcctcctgcacctccagctcg 474 ||||||||||| ||||||||||| ||||| Sbjct: 623682 cattgatggccgcctgcacctcctgctcg 623710
>emb|X69969.1|CRALDCHL C.reinhardtii mRNA for fructose-1,6-bisphosphate aldolase Length = 1737 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcctcctgcacctccag 470 ||||||||||||||||||||| Sbjct: 742 gatggcctcctgcacctccag 722
>gb|S72951.1| Chlamydomonas reinhardtii fructosediphophate aldolase gene, complete cds; and unknown gene; nuclear genes for chloroplast products Length = 1717 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcctcctgcacctccag 470 ||||||||||||||||||||| Sbjct: 741 gatggcctcctgcacctccag 721
>gb|AC019211.6| Homo sapiens BAC clone RP11-454J11 from 2, complete sequence Length = 167471 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 cctcgccagccctctgtcaac 561 ||||||||||||||||||||| Sbjct: 22593 cctcgccagccctctgtcaac 22573
>emb|X85495.1|CRALD C.reinhardtii ald gene Length = 3676 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 450 gatggcctcctgcacctccag 470 ||||||||||||||||||||| Sbjct: 1915 gatggcctcctgcacctccag 1895
>gb|AC152418.5| Mus musculus BAC clone RP23-7L11 from chromosome 7, complete sequence Length = 249571 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 ctccgagcaagccatgcctc 113 |||||||||||||||||||| Sbjct: 174196 ctccgagcaagccatgcctc 174215
>gb|AC169984.2| Mus musculus BAC clone RP23-450I9 from chromosome 6, complete sequence Length = 181976 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tgatggcctcctgcacctcc 468 |||||||||||||||||||| Sbjct: 107044 tgatggcctcctgcacctcc 107025
>gb|BC028927.1| Mus musculus exocyst complex component 7, mRNA (cDNA clone MGC:30390 IMAGE:4208803), complete cds Length = 2102 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 594 cctcctgcacctccagctcg 575
>gb|AC121894.2| Mus musculus BAC clone RP24-157H5 from 6, complete sequence Length = 148613 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 449 tgatggcctcctgcacctcc 468 |||||||||||||||||||| Sbjct: 2387 tgatggcctcctgcacctcc 2368
>emb|AL590105.19| Human DNA sequence from clone RP11-273H7 on chromosome 10 Contains the 5' end of the gene for protein kinase (PKE), gene KIAA1674, gene LOC170394, the 5' end of a novel gene and six CpG islands, complete sequence Length = 132772 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 ctgtccatccccaactgccc 542 |||||||||||||||||||| Sbjct: 23523 ctgtccatccccaactgccc 23504
>emb|AJ621385.1| Gallus gallus RAD50 gene (partial), IL5 gene, IRF1 gene, OCTN2 gene and OCTN1 gene (partial) Length = 113629 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcctcctgcacctccagct 472 |||||||||||||||||||| Sbjct: 64380 ggcctcctgcacctccagct 64399
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 catcgaaccccatcagcgcg 164 |||||||||||||||||||| Sbjct: 3214933 catcgaaccccatcagcgcg 3214914
>gb|AC111149.4| Homo sapiens chromosome 8, clone RP11-434I12, complete sequence Length = 135213 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 cccgtgccgcctcctctgcgcacc 400 |||||||||||||| ||||||||| Sbjct: 98833 cccgtgccgcctccgctgcgcacc 98810
>dbj|AK140450.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN full-length enriched library, clone:B830030O19 product:exocyst complex component 7, full insert sequence Length = 3313 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 592 cctcctgcacctccagctcg 573
>dbj|AK167769.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730011M14 product:exocyst complex component 7, full insert sequence Length = 2083 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 601 cctcctgcacctccagctcg 582
>dbj|AK169928.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630004J16 product:exocyst complex component 7, full insert sequence Length = 2085 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 605 cctcctgcacctccagctcg 586
>dbj|AK162868.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230067I15 product:exocyst complex component 7, full insert sequence Length = 3738 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 604 cctcctgcacctccagctcg 585
>dbj|AK087601.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230023C22 product:exocyst component protein 70 kDa homolog (S. cerevisiae), full insert sequence Length = 2088 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 606 cctcctgcacctccagctcg 587
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 agccatcgaaccccatcagc 161 |||||||||||||||||||| Sbjct: 4864558 agccatcgaaccccatcagc 4864577
>ref|NM_016857.1| Mus musculus exocyst complex component 7 (Exoc7), mRNA Length = 2094 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 553 cctcctgcacctccagctcg 534
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 gcgccaccgaccagatccgg 356 |||||||||||||||||||| Sbjct: 2042544 gcgccaccgaccagatccgg 2042563
>dbj|AK173094.1| Mus musculus premature mRNA for mKIAA1067 protein Length = 6719 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 594 cctcctgcacctccagctcg 575
>gb|BC053710.1| Mus musculus exocyst complex component 7, mRNA (cDNA clone MGC:60517 IMAGE:30056570), complete cds Length = 2111 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 605 cctcctgcacctccagctcg 586
>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1122_A12 Length = 149011 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 agccatcgaaccccatcagc 161 |||||||||||||||||||| Sbjct: 23812 agccatcgaaccccatcagc 23831
>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056D04 Length = 158118 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 agccatcgaaccccatcagc 161 |||||||||||||||||||| Sbjct: 69352 agccatcgaaccccatcagc 69371
>ref|XM_319833.2| Anopheles gambiae str. PEST ENSANGP00000005228 (ENSANGG00000004028), partial mRNA Length = 660 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 ctcctgcacctccagctcga 475 |||||||||||||||||||| Sbjct: 483 ctcctgcacctccagctcga 464
>gb|AC150745.2| Mus musculus BAC clone RP24-77E13 from 7, complete sequence Length = 232607 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 ctccgagcaagccatgcctc 113 |||||||||||||||||||| Sbjct: 163469 ctccgagcaagccatgcctc 163450
>gb|AC159985.2| Gallus gallus BAC clone CH261-18F10 from chromosome unknown, complete sequence Length = 211288 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 453 ggcctcctgcacctccagct 472 |||||||||||||||||||| Sbjct: 197354 ggcctcctgcacctccagct 197373
>gb|AF014461.1|AF014461 Mus musculus EXO70 protein (Exo70) mRNA, complete cds Length = 2094 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 553 cctcctgcacctccagctcg 534
>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete sequence Length = 212385 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 cctcctgcacctccagctcg 474 |||||||||||||||||||| Sbjct: 49186 cctcctgcacctccagctcg 49205 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,603,099 Number of Sequences: 3902068 Number of extensions: 2603099 Number of successful extensions: 42669 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42512 Number of HSP's gapped (non-prelim): 157 length of query: 572 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 549 effective length of database: 17,143,297,704 effective search space: 9411670439496 effective search space used: 9411670439496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)