| Clone Name | basd14g03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107J07, full insert sequence Length = 2462 Score = 454 bits (229), Expect = e-124 Identities = 371/417 (88%), Gaps = 1/417 (0%) Strand = Plus / Plus Query: 199 cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 258 ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| | Sbjct: 215 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 274 Query: 259 tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 318 | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 275 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 334 Query: 319 cgccttccgtggtggcttacaccaagggaggagaacggctagtgggccagattgctaaga 378 |||| ||||||||||| ||||||||||| || || ||||| || || ||||| || ||| Sbjct: 335 cgccctccgtggtggcgtacaccaagggcggggagcggctggtcgggcagatcgccaagc 394 Query: 379 ggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgca 438 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 395 ggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgca 454 Query: 439 agatggcttgaggtagatgacgaggccaagcaggtctcgtataacgttgtgcgtgatgag 498 ||||||| ||||| || |||||||||||||||||||| || |||| || || || || Sbjct: 455 agatggc-cgaggtcgacgacgaggccaagcaggtctcctaccacgtcgtccgcgacgac 513 Query: 499 aacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagata 558 ||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||| Sbjct: 514 aacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgccgccgaggagatt 573 Query: 559 tccgcgcaggtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 574 tccgcgcaggtcttgaggaagttggtggacgatgcatctaagtttttgaatgacaaa 630
>dbj|AK072071.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111L16, full insert sequence Length = 2201 Score = 392 bits (198), Expect = e-106 Identities = 328/370 (88%), Gaps = 1/370 (0%) Strand = Plus / Plus Query: 246 accaactccgccgtcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgag 305 ||||||||||| || ||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 7 accaactccgcggtggcggcgatggagggcgggaagccgacggtcatcaccaacgccgag 66 Query: 306 ggccagcggacgacgccttccgtggtggcttacaccaagggaggagaacggctagtgggc 365 | ||||||||||||||| ||||||||||| ||||||||||| || || ||||| || || Sbjct: 67 gaccagcggacgacgccctccgtggtggcgtacaccaagggcggggagcggctggtcggg 126 Query: 366 cagattgctaagaggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgc 425 ||||| || ||| |||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 127 cagatcgccaagcggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgc 186 Query: 426 ttcattggacgcaagatggcttgaggtagatgacgaggccaagcaggtctcgtataacgt 485 ||||| || ||||||||||| ||||| || |||||||||||||||||||| || |||| Sbjct: 187 ttcatcggccgcaagatggc-cgaggtcgacgacgaggccaagcaggtctcctaccacgt 245 Query: 486 tgtgcgtgatgagaacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgc 545 || || || || ||||| |||||||||||||||||||| || ||||||||||||||||| Sbjct: 246 cgtccgcgacgacaacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgc 305 Query: 546 agcggaagagatatccgcgcaggtcttgaggaaattggtggatgatgcatctaagtttct 605 || || ||||| |||||||||||||||||||| |||||||| ||||||||||||||| | Sbjct: 306 cgccgaggagatttccgcgcaggtcttgaggaagttggtggacgatgcatctaagttttt 365 Query: 606 gaatgacaaa 615 |||||||||| Sbjct: 366 gaatgacaaa 375
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 387 bits (195), Expect = e-104 Identities = 328/371 (88%), Gaps = 1/371 (0%) Strand = Plus / Plus Query: 199 cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 258 ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| | Sbjct: 7985422 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 7985481 Query: 259 tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 318 | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 7985482 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 7985541 Query: 319 cgccttccgtggtggcttacaccaagggaggagaacggctagtgggccagattgctaaga 378 |||| ||||||||||| ||||||||||| || || ||||| || || ||||| || ||| Sbjct: 7985542 cgccctccgtggtggcgtacaccaagggcggggagcggctggtcgggcagatcgccaagc 7985601 Query: 379 ggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgca 438 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 7985602 ggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgca 7985661 Query: 439 agatggcttgaggtagatgacgaggccaagcaggtctcgtataacgttgtgcgtgatgag 498 ||||||| ||||| || |||||||||||||||||||| || |||| || || || || Sbjct: 7985662 agatggc-cgaggtcgacgacgaggccaagcaggtctcctaccacgtcgtccgcgacgac 7985720 Query: 499 aacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagata 558 ||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||| Sbjct: 7985721 aacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgccgccgaggagatt 7985780 Query: 559 tccgcgcaggt 569 ||||||||||| Sbjct: 7985781 tccgcgcaggt 7985791 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 565 caggtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 |||||||||||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 7986633 caggtcttgaggaagttggtggacgatgcatctaagtttttgaatgacaaa 7986683
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 387 bits (195), Expect = e-104 Identities = 328/371 (88%), Gaps = 1/371 (0%) Strand = Plus / Plus Query: 199 cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 258 ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| | Sbjct: 7985303 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 7985362 Query: 259 tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 318 | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 7985363 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 7985422 Query: 319 cgccttccgtggtggcttacaccaagggaggagaacggctagtgggccagattgctaaga 378 |||| ||||||||||| ||||||||||| || || ||||| || || ||||| || ||| Sbjct: 7985423 cgccctccgtggtggcgtacaccaagggcggggagcggctggtcgggcagatcgccaagc 7985482 Query: 379 ggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgca 438 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 7985483 ggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgca 7985542 Query: 439 agatggcttgaggtagatgacgaggccaagcaggtctcgtataacgttgtgcgtgatgag 498 ||||||| ||||| || |||||||||||||||||||| || |||| || || || || Sbjct: 7985543 agatggc-cgaggtcgacgacgaggccaagcaggtctcctaccacgtcgtccgcgacgac 7985601 Query: 499 aacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagata 558 ||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||| Sbjct: 7985602 aacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgccgccgaggagatt 7985661 Query: 559 tccgcgcaggt 569 ||||||||||| Sbjct: 7985662 tccgcgcaggt 7985672 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Plus Query: 565 caggtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 |||||||||||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 7986514 caggtcttgaggaagttggtggacgatgcatctaagtttttgaatgacaaa 7986564
>emb|AL831810.4|CNS08CAN Oryza sativa chromosome 12, . BAC OSJNBa0077B14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153111 Score = 387 bits (195), Expect = e-104 Identities = 328/371 (88%), Gaps = 1/371 (0%) Strand = Plus / Minus Query: 199 cgatgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccg 258 ||||||||||| ||||||||||||||||||| |||||||| || || ||||||||||| | Sbjct: 14748 cgatgcgggtggcgtgcgagaaggtggtggggatcgacctcgggacgaccaactccgcgg 14689 Query: 259 tcgcggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacga 318 | ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 14688 tggcggcgatggagggcgggaagccgacggtcatcaccaacgccgagggccagcggacga 14629 Query: 319 cgccttccgtggtggcttacaccaagggaggagaacggctagtgggccagattgctaaga 378 |||| ||||||||||| ||||||||||| || || ||||| || || ||||| || ||| Sbjct: 14628 cgccctccgtggtggcgtacaccaagggcggggagcggctggtcgggcagatcgccaagc 14569 Query: 379 ggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgca 438 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct: 14568 ggcaggccgtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgca 14509 Query: 439 agatggcttgaggtagatgacgaggccaagcaggtctcgtataacgttgtgcgtgatgag 498 ||||||| ||||| || |||||||||||||||||||| || |||| || || || || Sbjct: 14508 agatggc-cgaggtcgacgacgaggccaagcaggtctcctaccacgtcgtccgcgacgac 14450 Query: 499 aacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagata 558 ||||| |||||||||||||||||||| || ||||||||||||||||| || || ||||| Sbjct: 14449 aacggcaacgtcaagctcgactgccccgccatcggcaagcagttcgccgccgaggagatt 14390 Query: 559 tccgcgcaggt 569 ||||||||||| Sbjct: 14389 tccgcgcaggt 14379 Score = 77.8 bits (39), Expect = 4e-11 Identities = 48/51 (94%) Strand = Plus / Minus Query: 565 caggtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 |||||||||||||| |||||||| ||||||||||||||| ||||||||||| Sbjct: 13537 caggtcttgaggaagttggtggacgatgcatctaagtttttgaatgacaaa 13487
>gb|BT024111.1| Zea mays clone EL01N0516B01 mRNA sequence Length = 2060 Score = 182 bits (92), Expect = 9e-43 Identities = 264/320 (82%), Gaps = 1/320 (0%) Strand = Plus / Plus Query: 292 tcaccaacgccgagggccagcggacgacgccttccgtggtggcttacaccaagggaggag 351 ||||||||||||||||| ||| || || || ||||| ||||| ||||||| ||| | Sbjct: 9 tcaccaacgccgagggcgcgcgcacaactccctccgtagtggcgtacaccattacagggg 68 Query: 352 aacggctagtgggccagattgctaagaggcaggccgttgtcaacccggaaaacaccttct 411 | || || ||||| ||||| |||||| | ||||| || || ||||| || |||||||||| Sbjct: 69 agcgcctggtggggcagatcgctaagcgccaggcggtcgtgaaccccgagaacaccttct 128 Query: 412 tctccgtcaagcgcttcattggacgcaagatggcttgaggtagatgacgaggccaagcag 471 |||| |||||||||||||| || ||||||||| | |||||| || ||||||||||||||| Sbjct: 129 tctctgtcaagcgcttcatcggccgcaagatgtc-tgaggtcgacgacgaggccaagcag 187 Query: 472 gtctcgtataacgttgtgcgtgatgagaacggaaacgtcaagctcgactgccctgctatc 531 |||||||| |||||| || |||||||| |||||||| ||||||||||| ||||| Sbjct: 188 gtctcgtacggcgttgtcaaagacgagaacggcaacgtcaaactcgactgccccgctatt 247 Query: 532 ggcaagcagttcgcagcggaagagatatccgcgcaggtcttgaggaaattggtggatgat 591 ||||| ||||| || || || ||||| || |||| || |||||||| |||||||||||| Sbjct: 248 ggcaaacagtttgctgccgaggagatctctgcgcttgttttgaggaagttggtggatgat 307 Query: 592 gcatctaagtttctgaatga 611 |||||||||||||| ||||| Sbjct: 308 gcatctaagtttcttaatga 327
>gb|AC098572.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1234_D05, complete sequence Length = 107476 Score = 170 bits (86), Expect = 3e-39 Identities = 203/242 (83%) Strand = Plus / Plus Query: 202 tgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccgtcg 261 |||||||| |||||||||||||||| || |||||||| || || ||||||||||| || | Sbjct: 32623 tgcgggtggcgtgcgagaaggtggtcgggatcgacctcgggaccaccaactccgcggtgg 32682 Query: 262 cggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacgacgc 321 |||| ||||||||||| ||||||||| | ||||||||||||||||| || || |||| Sbjct: 32683 cggccatggagggcggcaagccgacgatcgtcaccaacgccgagggcgcccgcaccacgc 32742 Query: 322 cttccgtggtggcttacaccaagggaggagaacggctagtgggccagattgctaagaggc 381 | || || || || ||||||||| || || ||||| ||||| ||||| || ||| | | Sbjct: 32743 cgtcggtcgtcgcctacaccaagtccggtgaccggctggtggggcagatcgccaagcgac 32802 Query: 382 aggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgcaaga 441 |||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct: 32803 aggcggtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgcaaga 32862 Query: 442 tg 443 || Sbjct: 32863 tg 32864 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 499 aacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagata 558 ||||| ||||||||||||||||| || || || |||||||||||||| || || ||||| Sbjct: 32919 aacggcaacgtcaagctcgactgtcccgccattggcaagcagttcgccgccgaggagatc 32978 Query: 559 tccgcgcaggt 569 ||||| ||||| Sbjct: 32979 tccgcccaggt 32989
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 170 bits (86), Expect = 3e-39 Identities = 203/242 (83%) Strand = Plus / Plus Query: 202 tgcgggtgacgtgcgagaaggtggtgggaatcgacctgggcactaccaactccgccgtcg 261 |||||||| |||||||||||||||| || |||||||| || || ||||||||||| || | Sbjct: 13488577 tgcgggtggcgtgcgagaaggtggtcgggatcgacctcgggaccaccaactccgcggtgg 13488636 Query: 262 cggcgatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacgacgc 321 |||| ||||||||||| ||||||||| | ||||||||||||||||| || || |||| Sbjct: 13488637 cggccatggagggcggcaagccgacgatcgtcaccaacgccgagggcgcccgcaccacgc 13488696 Query: 322 cttccgtggtggcttacaccaagggaggagaacggctagtgggccagattgctaagaggc 381 | || || || || ||||||||| || || ||||| ||||| ||||| || ||| | | Sbjct: 13488697 cgtcggtcgtcgcctacaccaagtccggtgaccggctggtggggcagatcgccaagcgac 13488756 Query: 382 aggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgcaaga 441 |||| || ||||||||||| ||||||||||||||||||||||||||||| || ||||||| Sbjct: 13488757 aggcggtcgtcaacccggagaacaccttcttctccgtcaagcgcttcatcggccgcaaga 13488816 Query: 442 tg 443 || Sbjct: 13488817 tg 13488818 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 499 aacggaaacgtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagata 558 ||||| ||||||||||||||||| || || || |||||||||||||| || || ||||| Sbjct: 13488873 aacggcaacgtcaagctcgactgtcccgccattggcaagcagttcgccgccgaggagatc 13488932 Query: 559 tccgcgcaggt 569 ||||| ||||| Sbjct: 13488933 tccgcccaggt 13488943
>gb|BT016772.1| Zea mays clone Contig605 mRNA sequence Length = 1938 Score = 125 bits (63), Expect = 2e-25 Identities = 129/151 (85%) Strand = Plus / Plus Query: 461 aggccaagcaggtctcgtataacgttgtgcgtgatgagaacggaaacgtcaagctcgact 520 ||||||||||||||||||| |||||| |||||||||| |||||||| ||||||| Sbjct: 13 aggccaagcaggtctcgtacggcgttgtcaaacatgagaacggcaacgtcaaactcgact 72 Query: 521 gccctgctatcggcaagcagttcgcagcggaagagatatccgcgcaggtcttgaggaaat 580 |||| ||||| ||||| ||||| || || || ||||| || |||||||| |||||||| | Sbjct: 73 gccccgctattggcaaacagtttgctgccgaggagatctctgcgcaggttttgaggaagt 132 Query: 581 tggtggatgatgcatctaagtttctgaatga 611 ||||||||||||||||||||||||| ||||| Sbjct: 133 tggtggatgatgcatctaagtttcttaatga 163
>emb|AJ271605.2|DSA271605 Dunaliella salina mRNA for chloroplast-localised heat shock protein (hsp70B gene) Length = 2764 Score = 113 bits (57), Expect = 7e-22 Identities = 183/225 (81%) Strand = Plus / Plus Query: 216 gagaaggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggc 275 |||||||||||||| |||||| |||| || ||||||||||| || || ||||||||||| Sbjct: 201 gagaaggtggtgggcatcgacttgggaaccaccaactccgctgtggcagcgatggaggga 260 Query: 276 ggtaagccgacggtgatcaccaacgccgagggccagcggacgacgccttccgtggtggct 335 || |||||||| | ||||||||||| ||||| || || || || ||||||||||| Sbjct: 261 ggcaagccgaccatcatcaccaacgctgagggtagccgcaccaccccctccgtggtggcc 320 Query: 336 tacaccaagggaggagaacggctagtgggccagattgctaagaggcaggccgttgtcaac 395 | ||||||||| || || || || || || ||||| || ||| | || ||||| || ||| Sbjct: 321 ttcaccaagggcggtgaccgcctggttggacagatcgccaagcgccaagccgtggtgaac 380 Query: 396 ccggaaaacaccttcttctccgtcaagcgcttcattggacgcaag 440 || || ||||||||||||||||||||||| ||||| || |||||| Sbjct: 381 ccagagaacaccttcttctccgtcaagcgtttcatcggtcgcaag 425
>gb|AY072744.1| Dunaliella salina heat shock protein 70B (hsp70B) mRNA, complete cds Length = 2732 Score = 105 bits (53), Expect = 2e-19 Identities = 182/225 (80%) Strand = Plus / Plus Query: 216 gagaaggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggc 275 ||||||||||| || |||||| |||| || ||||||||||| || || ||||||||||| Sbjct: 145 gagaaggtggttggcatcgacttgggaaccaccaactccgctgtggcagcgatggaggga 204 Query: 276 ggtaagccgacggtgatcaccaacgccgagggccagcggacgacgccttccgtggtggct 335 || ||||| ||| | ||| ||||||||||||| || || || || ||||||||||| Sbjct: 205 ggcaagcccacgatcatcgccaacgccgagggtagccgcaccaccccctccgtggtggcc 264 Query: 336 tacaccaagggaggagaacggctagtgggccagattgctaagaggcaggccgttgtcaac 395 | ||||||||| || || || || || || ||||| || ||| | || ||||| || ||| Sbjct: 265 ttcaccaagggcggtgaccgcctggttggacagatcgccaagcgccaagccgtggtgaac 324 Query: 396 ccggaaaacaccttcttctccgtcaagcgcttcattggacgcaag 440 || || ||||||||||||||||||||||| ||||| || |||||| Sbjct: 325 ccagagaacaccttcttctccgtcaagcgtttcatcggtcgcaag 369
>gb|M99565.1|SPI80HSP Spinach 80 kDa heat shock protein (HSP80) mRNA, 3' end Length = 2040 Score = 79.8 bits (40), Expect = 1e-11 Identities = 91/108 (84%) Strand = Plus / Plus Query: 508 gtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagatatccgcgcag 567 |||||||| || ||||||||||| || || ||||| || ||||||||||| || || || Sbjct: 133 gtcaagcttgagtgccctgctattggtaaacagtttgctgcggaagagatctctgctcaa 192 Query: 568 gtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 |||||||| ||| | || ||||||||||| |||||| ||||||||||| Sbjct: 193 gtcttgagaaaacttgttgatgatgcatcaaagtttttgaatgacaaa 240
>gb|AF035456.1|AF035456 Spinacia oleracea heat shock 70 protein (HSC70-9) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2574 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 508 gtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagatatccgcgcag 567 |||||||| || ||||||||||| || || ||||| || ||||||||||| || || || Sbjct: 674 gtcaagcttgagtgccctgctattggtaaacagtttgctgcggaagagatctctgctcaa 733 Query: 568 gtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 || ||||| ||| | || ||||||||||| |||||| ||||||||||| Sbjct: 734 gtgttgagaaaacttgttgatgatgcatcaaagtttttgaatgacaaa 781
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 266 gatggagggcggtaagccgacggtgatcaccaacgccgagggccagcggacgacgccttc 325 ||||||||| || ||||| || |||||| | |||||||||||| || ||||||||||| Sbjct: 2489024 gatggagggtggcaagcccaccgtgatcgcgaacgccgagggcttccgcacgacgccttc 2488965 Query: 326 cgtggtggcttacac 340 |||||| |||||||| Sbjct: 2488964 cgtggttgcttacac 2488950
>emb|X96502.1|CRHSP70B C.reinhardtii hsp70b gene Length = 5598 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 366 cagattgctaagaggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgc 425 |||||||| ||| | ||||| || |||||||| || ||||| ||||||||||| |||||| Sbjct: 1985 cagattgccaagcgccaggctgtggtcaaccccgagaacactttcttctccgtaaagcgc 2044 Query: 426 ttcat 430 ||||| Sbjct: 2045 ttcat 2049 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 220 aggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggcggta 279 |||| ||||| ||||| |||||||| |||||||| || || || || |||||||| || | Sbjct: 1440 aggtcgtgggtatcgatctgggcacgaccaactcggctgtggctgccatggagggtggca 1499 Query: 280 agccgacggtgatcaccaacgccgagggc 308 ||||||| | ||||||||||| |||||| Sbjct: 1500 agccgaccatcatcaccaacgctgagggc 1528
>gb|U92815.1|CLU92815 Citrullus lanatus heat shock protein 70 precursor mRNA, complete cds Length = 2430 Score = 50.1 bits (25), Expect = 0.009 Identities = 100/125 (80%) Strand = Plus / Plus Query: 216 gagaaggtggtgggaatcgacctgggcactaccaactccgccgtcgcggcgatggagggc 275 ||||| || |||||||| || || || ||||| |||||||| || ||||| ||||| || Sbjct: 247 gagaaagttgtgggaattgatcttggaactactaactccgcagttgcggccatggaaggt 306 Query: 276 ggtaagccgacggtgatcaccaacgccgagggccagcggacgacgccttccgtggtggct 335 || ||||| || | | ||||||||||| ||| || | |||||||| || ||||||||| Sbjct: 307 gggaagccaactattgtaaccaacgccgaaggcaagagaacgacgccatcggtggtggct 366 Query: 336 tacac 340 ||||| Sbjct: 367 tacac 371
>gb|AC140550.31| Medicago truncatula clone mth2-54a24, complete sequence Length = 129388 Score = 48.1 bits (24), Expect = 0.034 Identities = 153/196 (78%) Strand = Plus / Plus Query: 238 tgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtgatcacca 297 |||| |||||||| ||||||||||| || ||||| || || || || || | ||||||| Sbjct: 26515 tgggtactaccaattccgccgtcgccgccatggaaggtggcaaacctaccatcatcacca 26574 Query: 298 acgccgagggccagcggacgacgccttccgtggtggcttacaccaagggaggagaacggc 357 ||||||| || ||||| || || || || || || |||||||||||| || || | | Sbjct: 26575 acgccgaaggtcagcgtaccactccctctgtcgttgcttacaccaagaacggtgatagac 26634 Query: 358 tagtgggccagattgctaagaggcaggccgttgtcaacccggaaaacaccttcttctccg 417 | || || |||||||| ||| | |||||||| || || || || |||||||||||||| | Sbjct: 26635 tcgtcggtcagattgccaagcgtcaggccgtcgttaatcccgagaacaccttcttctctg 26694 Query: 418 tcaagcgcttcattgg 433 | ||| | |||||||| Sbjct: 26695 tgaagagattcattgg 26710
>emb|X69213.1|PSST70 P.sativum Psst70 gene for heat-shock protein Length = 4974 Score = 48.1 bits (24), Expect = 0.034 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 369 attgctaagaggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttc 428 ||||| ||| ||||||| ||||| || || || ||||| || |||||||||||| | || Sbjct: 1129 attgccaagcggcaggcggttgtgaatcccgagaacacgtttttctccgtcaagaggttt 1188 Query: 429 attggacgcaagatggcttgaggtagatgacgaggccaagcaggtctc 476 |||||||| |||||| | |||||| || || ||| | ||||||||||| Sbjct: 1189 attggacggaagatgtc-tgaggttgacgaagagtcaaagcaggtctc 1235
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 381 caggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttcattggacgcaag 440 ||||||||| ||||||| || ||||| |||| || |||||||||||||| || |||||| Sbjct: 4484647 caggccgttctcaaccccgagaacacgttctattcggtcaagcgcttcatcggccgcaag 4484706
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 225 gtgggaatcgacctgggcactaccaact 252 ||||| |||||||||||||||||||||| Sbjct: 3798968 gtgggcatcgacctgggcactaccaact 3798941
>gb|AF039083.1|AF039083 Spinacia oleracea heat shock 70 protein (HSC70-9) gene, nuclear gene encoding chloroplast protein, complete cds Length = 4316 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 564 gcaggtcttgaggaaattggtggatgatgcatctaagtttctgaatgacaaa 615 |||||| ||||| ||| | || ||||||||||| |||||| ||||||||||| Sbjct: 1347 gcaggtgttgagaaaacttgttgatgatgcatcaaagtttttgaatgacaaa 1398 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 508 gtcaagctcgactgccctgctatcggcaagcagttcgcagcggaagagat 557 |||||||| || ||||||||||| || || ||||| || ||||||||||| Sbjct: 674 gtcaagcttgagtgccctgctattggtaaacagtttgctgcggaagagat 723
>gb|L03299.1|PEA70HSP Pisum sativum chloroplast stromal 70 kDa heat shock protein (hsp70) mRNA, complete cds Length = 2474 Score = 48.1 bits (24), Expect = 0.034 Identities = 88/108 (81%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 369 attgctaagaggcaggccgttgtcaacccggaaaacaccttcttctccgtcaagcgcttc 428 ||||| ||| ||||||| ||||| || || || ||||| || |||||||||||| | || Sbjct: 400 attgccaagcggcaggcggttgtgaatcccgagaacacgtttttctccgtcaagaggttt 459 Query: 429 attggacgcaagatggcttgaggtagatgacgaggccaagcaggtctc 476 |||||||| |||||| | |||||| || || ||| | ||||||||||| Sbjct: 460 attggacggaagatgtc-tgaggttgacgaagagtcaaagcaggtctc 506
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 565 caggtcttgaggaaattggtgga 587 ||||||||||||||||||||||| Sbjct: 1774757 caggtcttgaggaaattggtgga 1774735
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 266 gatggagggcggtaagccgacggtgatcaccaacgccgagggc 308 ||||||||| |||||||| || || ||| |||||||||||||| Sbjct: 2215405 gatggagggtggtaagcccaccgttatcgccaacgccgagggc 2215363
>emb|AL139079.2|CJ11168X6 Campylobacter jejuni subsp. jejuni NCTC 11168 complete genome; segment 6/6 Length = 155932 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 565 caggtcttgaggaaattggtgga 587 ||||||||||||||||||||||| Sbjct: 152799 caggtcttgaggaaattggtgga 152777
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 224 ggtgggaatcgacctgggcactaccaactcc 254 |||||| |||||||||||||| ||||||||| Sbjct: 1064481 ggtgggcatcgacctgggcaccaccaactcc 1064511
>gb|AF004221.1|AF004221 Campylobacter coli hook protein (flgE) gene, complete cds Length = 3000 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 565 caggtcttgaggaaattggtgga 587 ||||||||||||||||||||||| Sbjct: 2520 caggtcttgaggaaattggtgga 2542
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 225 gtgggaatcgacctgggcactaccaa 250 |||||||||||| ||||||||||||| Sbjct: 5209598 gtgggaatcgacttgggcactaccaa 5209573 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactcc 254 ||||||||||| |||||||||||| Sbjct: 894940 atcgacctggggactaccaactcc 894963
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 225 gtgggaatcgacctgggcactaccaa 250 ||||| |||||||||||||||||||| Sbjct: 1397489 gtgggtatcgacctgggcactaccaa 1397514 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 atcgacctgggcactaccaactcc 254 ||||||||||| |||||||||||| Sbjct: 4992600 atcgacctggggactaccaactcc 4992577
>emb|X77458.1|SCDNAJ S.coelicolor dnaK, grpE and dnaJ genes Length = 5611 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 290 |||||||||||||| || ||||||| |||| | |||||||||| |||| || || Sbjct: 1894 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 1953 Query: 291 atcaccaacgccgagggc 308 |||||||||||||||||| Sbjct: 1954 atcaccaacgccgagggc 1971
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Minus Query: 231 atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 290 |||||||||||||| || ||||||| |||| | |||||||||| |||| || || Sbjct: 134725 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 134666 Query: 291 atcaccaacgccgagggc 308 |||||||||||||||||| Sbjct: 134665 atcaccaacgccgagggc 134648
>gb|L46700.1|STMDNAK Streptomyces coelicolor DnaK (dnaK), GrpE (grpE), DnaJ (dnaJ), and heat shock protein (hspR) genes, complete cds Length = 4648 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 290 |||||||||||||| || ||||||| |||| | |||||||||| |||| || || Sbjct: 218 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 277 Query: 291 atcaccaacgccgagggc 308 |||||||||||||||||| Sbjct: 278 atcaccaacgccgagggc 295
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 0.54 Identities = 64/78 (82%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactccgccgtcgcggcgatggagggcggtaagccgacggtg 290 |||||||||||||| || ||||||| |||| | |||||||||| |||| || || Sbjct: 5479072 atcgacctgggcacgactaactccgtcgtcagcgttctggagggcggcgagcccaccgtc 5479131 Query: 291 atcaccaacgccgagggc 308 |||||||||||||||||| Sbjct: 5479132 atcaccaacgccgagggc 5479149 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggcca 99 |||||||||||||||||||||| Sbjct: 405428 tcccaggtcagcgcgatggcca 405407 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggcca 99 |||||||||||||||||||||| Sbjct: 351862 tcccaggtcagcgcgatggcca 351841 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 225 gtgggaatcgacctgggcactaccaactc 253 ||||| |||||||||||||| |||||||| Sbjct: 8630212 gtgggcatcgacctgggcaccaccaactc 8630240
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 ggtcagcgcgatggccagcgcc 104 |||||||||||||||||||||| Sbjct: 4521105 ggtcagcgcgatggccagcgcc 4521126
>ref|XM_447319.1| Candida glabrata CBS138 hypothetical protein (CAGL0I01496g) partial mRNA Length = 1944 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 caggccgttgtcaacccggaaaacacctt 409 ||||||||||| |||||||| |||||||| Sbjct: 235 caggccgttgtgaacccggagaacacctt 263
>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence Length = 1089401 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 381 caggccgttgtcaacccggaaaacacctt 409 ||||||||||| |||||||| |||||||| Sbjct: 120492 caggccgttgtgaacccggagaacacctt 120520
>emb|BX569695.1| Synechococcus sp. WH8102 complete genome; segment 7/7 Length = 344615 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 312 cggacgacgccttccgtggtggcttacaccaag 344 ||||| ||||| ||||| ||||||||||||||| Sbjct: 325190 cggaccacgccctccgtcgtggcttacaccaag 325158
>dbj|AK069435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023024L22, full insert sequence Length = 1219 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 446 ttgaggtagatgacgaggcca 466 ||||||||||||||||||||| Sbjct: 900 ttgaggtagatgacgaggcca 920
>gb|DQ223723.1| Thermococcus sp. NA1 acylamino acid-releasing enzyme gene, complete cds Length = 15100 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 tgatgagaacggaaacgtcaa 512 ||||||||||||||||||||| Sbjct: 6741 tgatgagaacggaaacgtcaa 6761
>gb|L12237.1|MSG8318K Mycobacterium avium (clone Mavc83) DNA sequence encoding an 18 kDa protein Length = 610 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 gcggcggccggcggtcatgcc 154 ||||||||||||||||||||| Sbjct: 254 gcggcggccggcggtcatgcc 274
>ref|NM_190356.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 265 atggccagcgcctccccgtc 284
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 163 tgcgggttgctcgtggcgggcggc 186 |||||||||| ||||||||||||| Sbjct: 433794 tgcgggttgcgcgtggcgggcggc 433817
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 atcgacctgggcactaccaactcc 254 ||||||||||| |||||||||||| Sbjct: 5077639 atcgacctggggactaccaactcc 5077616
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 231 atcgacctgggcactaccaactcc 254 ||||||||||| |||||||||||| Sbjct: 4797113 atcgacctggggactaccaactcc 4797090
>emb|CR655756.2|CNS0F4YA Tetraodon nigroviridis full-length cDNA Length = 368 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 222 gtggtgggaatcgacctgggcactaccaactc 253 ||||| ||||||||||||||||| ||| |||| Sbjct: 233 gtggttggaatcgacctgggcaccacctactc 264
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gccggcggcggccggcggtc 149 |||||||||||||||||||| Sbjct: 227738 gccggcggcggccggcggtc 227757
>gb|AY738621.1| Natronococcus occultus DnaK gene, partial cds Length = 1359 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 295 ccaacgccgagggccagcggacgacgcc 322 ||||||| |||||| ||||||||||||| Sbjct: 35 ccaacgcggagggcgagcggacgacgcc 62
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 gtgatcaccaacgccgaggg 307 |||||||||||||||||||| Sbjct: 3036302 gtgatcaccaacgccgaggg 3036321
>dbj|AK132201.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:3425403H08 product:nuclear receptor subfamily 2, group E, member 1, full insert sequence Length = 3242 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gagccggcggcggccggcgg 147 |||||||||||||||||||| Sbjct: 600 gagccggcggcggccggcgg 619
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 acggtgatcaccaacgccgagggc 308 ||||||||| |||||||||||||| Sbjct: 5197261 acggtgatcgccaacgccgagggc 5197284
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 12343249 atggccagcgcctccccgtc 12343230
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 35028235 atggccagcgcctccccgtc 35028216 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 31905209 atggccagcgcctccccgtc 31905190
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 91287 atggccagcgcctccccgtc 91268
>dbj|AP003348.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0485B12 Length = 156047 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 35385 atggccagcgcctccccgtc 35366
>dbj|AP003302.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0703B11 Length = 144074 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 72463 atggccagcgcctccccgtc 72444
>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1168F12 Length = 141524 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 126803 atggccagcgcctccccgtc 126784
>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0599F09 Length = 157415 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 8833 atggccagcgcctccccgtc 8814
>gb|BT024167.1| Zea mays clone EL01N0424G03 mRNA sequence Length = 1505 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 cggcacgagggccgcctgaa 22 |||||||||||||||||||| Sbjct: 1 cggcacgagggccgcctgaa 20
>gb|AF135163.1|AF135163 Pseudomonas syringae pv. glycinea DnaK protein (dnaK) gene, complete cds Length = 1917 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactcc 254 ||||||||||| |||||||||||| Sbjct: 19 atcgacctggggactaccaactcc 42
>gb|AY752741.1| Mesorhizobium loti strain ATCC 33669 DnaK gene, complete cds Length = 1917 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactcc 254 |||||||||||||| ||||||||| Sbjct: 19 atcgacctgggcacgaccaactcc 42
>gb|AF073320.1|AF073320 Streptomyces scabies strain ATCC33282 ORFtnp pseudogene, complete sequence; and plant pathogenicity factor (nec1) gene, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 139 tcccaggtcagcgcgatggc 120
>gb|AF073319.1|AF073319 Streptomyces scabies strain 87.22 ORFtnp pseudogene, complete sequence; and plant pathogenicity factor (nec1) gene, complete cds Length = 1485 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 139 tcccaggtcagcgcgatggc 120
>gb|AF073318.1|AF073318 Streptomyces acidiscabies strain ATCC49003 ORFtnp pseudogene, complete sequence Length = 729 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 119 tcccaggtcagcgcgatggc 100
>gb|AF073316.1|AF073316 Streptomyces acidiscabies strain 84.104 ORFtnp pseudogene, complete sequence Length = 749 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 139 tcccaggtcagcgcgatggc 120
>gb|AF073315.1|AF073315 Streptomyces turgidiscabies strain Hi-C-13 ORFtnp pseudogene, complete sequence; and plant pathogenicity factor (nec1) gene, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 139 tcccaggtcagcgcgatggc 120
>gb|AF073314.1|AF073314 Streptomyces turgidiscabies strain Car-8 ORFtnp pseudogene, complete sequence; and plant pathogenicity factor (nec1) gene, complete cds Length = 1488 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 119 tcccaggtcagcgcgatggc 100
>gb|AY707080.1| Streptomyces turgidiscabies pathogenicity island putative transposase, hypothetical protein, putative transposase (IS1629), and negrogenic protein (nec1) genes, putative transposase pseudogene, and putative resolvase/invertase gene, complete cds Length = 11000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 5002 tcccaggtcagcgcgatggc 5021
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 aggtcagcgcgatggccagc 101 |||||||||||||||||||| Sbjct: 5957118 aggtcagcgcgatggccagc 5957137
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 231 atcgacctgggcactaccaactcc 254 |||||||||||||| ||||||||| Sbjct: 1779303 atcgacctgggcaccaccaactcc 1779326
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 ttgctcgtggcgggcggcca 188 |||||||||||||||||||| Sbjct: 27048 ttgctcgtggcgggcggcca 27067
>gb|AF031232.1|AF031232 Streptomyces scabies transposase pseudogene, partial sequence; plant pathogenicity factor (nec1) gene, complete cds; and unknown gene Length = 2406 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcccaggtcagcgcgatggc 97 |||||||||||||||||||| Sbjct: 291 tcccaggtcagcgcgatggc 272
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 atggccagcgcctccccgtc 112 |||||||||||||||||||| Sbjct: 1936 atggccagcgcctccccgtc 1917 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,684,453 Number of Sequences: 3902068 Number of extensions: 3684453 Number of successful extensions: 80277 Number of sequences better than 10.0: 72 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78473 Number of HSP's gapped (non-prelim): 1794 length of query: 615 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 592 effective length of database: 17,143,297,704 effective search space: 10148832240768 effective search space used: 10148832240768 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)