ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd14e19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA 509 e-141
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 509 e-141
3dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic D... 509 e-141
4dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic D... 509 e-141
5dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
6dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 509 e-141
7dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clon... 502 e-139
8gb|AY108268.1| Zea mays PCO078526 mRNA sequence 438 e-120
9gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma... 72 2e-09
10gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1)... 72 2e-09
11emb|X76131.1|SOATPCG S.oleracea (monatol) chloroplast ATP syntha... 66 1e-07
12emb|Y00758.1|SOATPG Spinach plastid atpC mRNA for ATP synthase g... 66 1e-07
13emb|X17257.1|SOATPC Spinach AtpC gene for chloroplast ATP syntha... 66 1e-07
14gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sytha... 66 1e-07
15emb|Z00018.1|RBATP R.blasticus atp operon coding for the 5 subun... 50 0.008
16gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP ... 50 0.008
17gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 48 0.032
18emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 46 0.13
19ref|XM_653752.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.50
20emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete ch... 44 0.50
21gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 44 0.50
22ref|XM_505851.1| Yarrowia lipolytica CLIB122, YALI0F25025g predi... 44 0.50
23gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 44 0.50
24gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 44 0.50
25emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plast... 44 0.50
26gb|CP000249.1| Frankia sp. CcI3, complete genome 44 0.50
27dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 44 0.50
28emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 44 0.50
29gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 2.0
30gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 42 2.0
31gb|AF515783.1| Aplysia californica neurite outgrowth regulated k... 42 2.0
32emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 42 2.0
33gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g... 42 2.0
34gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 2.0
35gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 2.0
36dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 2.0
37gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 2.0
38gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 7.9
39ref|XM_512476.1| PREDICTED: Pan troglodytes myosin IXB (LOC45582... 40 7.9
40gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence 40 7.9
41gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.9
42ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA 40 7.9
43gb|DQ481115.1| Uncultured bacterium clone RT-250_16 membrane bou... 40 7.9
44gb|DQ356948.1| Crocodilepox virus, complete genome 40 7.9
45gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipie... 40 7.9
46gb|AY174086.1| Pisolithus sp. W48 SSR P9 sequence 40 7.9
47gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete se... 40 7.9
48gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete ... 40 7.9
49emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.9
50emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.9
51emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 40 7.9
52emb|BX640421.1| Bordetella pertussis strain Tohama I, complete g... 40 7.9
53emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.9
54emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 40 7.9
55gb|AC020913.9| Homo sapiens chromosome 19 clone CTD-3032J10, com... 40 7.9
56gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete s... 40 7.9
57gb|AF333761.1|AF333761 Rhodococcus ruber putative two-component ... 40 7.9
58gb|AF124816.1|AF124816 Mentha x piperita cytochrome p450 isoform... 40 7.9
59gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 7.9
60dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, par... 40 7.9
61gb|AF194439.1|AF194439 Rattus norvegicus SMDF neuregulin alpha 2... 40 7.9
62dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.9
63gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the... 40 7.9
64emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.9
65gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.9
66gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds 40 7.9
67gb|AD000014.1|MSGY423 Mycobacterium tuberculosis sequence from c... 40 7.9 
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1469

 Score =  509 bits (257), Expect = e-141
 Identities = 479/553 (86%)
 Strand = Plus / Plus

                                                                       
Query: 26  ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
           ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 145 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 204

                                                                       
Query: 86  gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
           |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 205 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 264

                                                                       
Query: 146 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 324

                                                                       
Query: 206 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
           |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 325 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 384

                                                                       
Query: 266 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
           |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 385 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 444

                                                                       
Query: 326 caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
           ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 445 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 504

                                                                       
Query: 386 cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
           |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 505 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 564

                                                                       
Query: 446 cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
               || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 565 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 624

                                                                       
Query: 506 ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
           |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 625 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 684

                        
Query: 566 caacctcgtccgc 578
           |  ||||||||||
Sbjct: 685 ctccctcgtccgc 697
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  509 bits (257), Expect = e-141
 Identities = 479/553 (86%)
 Strand = Plus / Minus

                                                                            
Query: 26       ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
                ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 19603736 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 19603677

                                                                            
Query: 86       gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
                |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 19603676 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 19603617

                                                                            
Query: 146      cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
                 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 19603616 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 19603557

                                                                            
Query: 206      ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
                |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 19603556 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 19603497

                                                                            
Query: 266      cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
                |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 19603496 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 19603437

                                                                            
Query: 326      caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
                ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 19603436 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 19603377

                                                                            
Query: 386      cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
                |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 19603376 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 19603317

                                                                            
Query: 446      cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
                    || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 19603316 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 19603257

                                                                            
Query: 506      ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
                |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 19603256 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 19603197

                             
Query: 566      caacctcgtccgc 578
                |  ||||||||||
Sbjct: 19603196 ctccctcgtccgc 19603184
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>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0580A11
          Length = 174673

 Score =  509 bits (257), Expect = e-141
 Identities = 479/553 (86%)
 Strand = Plus / Minus

                                                                          
Query: 26     ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
              ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 147080 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 147021

                                                                          
Query: 86     gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
              |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 147020 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 146961

                                                                          
Query: 146    cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
               ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 146960 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 146901

                                                                          
Query: 206    ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
              |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 146900 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 146841

                                                                          
Query: 266    cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
              |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 146840 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 146781

                                                                          
Query: 326    caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
              ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 146780 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 146721

                                                                          
Query: 386    cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
              |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 146720 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 146661

                                                                          
Query: 446    cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
                  || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 146660 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 146601

                                                                          
Query: 506    ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
              |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 146600 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 146541

                           
Query: 566    caacctcgtccgc 578
              |  ||||||||||
Sbjct: 146540 ctccctcgtccgc 146528
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>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041J06
          Length = 138157

 Score =  509 bits (257), Expect = e-141
 Identities = 479/553 (86%)
 Strand = Plus / Minus

                                                                         
Query: 26    ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
             ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 42386 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 42327

                                                                         
Query: 86    gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
             |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 42326 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 42267

                                                                         
Query: 146   cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
              ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 42266 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 42207

                                                                         
Query: 206   ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
             |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 42206 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 42147

                                                                         
Query: 266   cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
             |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 42146 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 42087

                                                                         
Query: 326   caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
             ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 42086 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 42027

                                                                         
Query: 386   cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
             |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 42026 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 41967

                                                                         
Query: 446   cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
                 || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 41966 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 41907

                                                                         
Query: 506   ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
             |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 41906 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 41847

                          
Query: 566   caacctcgtccgc 578
             |  ||||||||||
Sbjct: 41846 ctccctcgtccgc 41834
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>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full
            insert sequence
          Length = 2822

 Score =  509 bits (257), Expect = e-141
 Identities = 479/553 (86%)
 Strand = Plus / Plus

                                                                        
Query: 26   ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
            ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 1610 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 1669

                                                                        
Query: 86   gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
            |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 1670 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 1729

                                                                        
Query: 146  cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
             ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1730 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 1789

                                                                        
Query: 206  ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
            |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 1790 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 1849

                                                                        
Query: 266  cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
            |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 1850 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 1909

                                                                        
Query: 326  caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
            ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 1910 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 1969

                                                                        
Query: 386  cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
            |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 1970 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 2029

                                                                        
Query: 446  cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
                || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 2030 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 2089

                                                                        
Query: 506  ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
            |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 2090 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 2149

                         
Query: 566  caacctcgtccgc 578
            |  ||||||||||
Sbjct: 2150 ctccctcgtccgc 2162
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>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full
           insert sequence
          Length = 1470

 Score =  509 bits (257), Expect = e-141
 Identities = 479/553 (86%)
 Strand = Plus / Plus

                                                                       
Query: 26  ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
           ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 145 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 204

                                                                       
Query: 86  gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
           |||||||||||||||||||||||||||||| || |||||||| || || |||||||||||
Sbjct: 205 gaagatcacggaggcgatgaagctggtggcggcggccaaggtgcggcgggcgcaggaggc 264

                                                                       
Query: 146 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 324

                                                                       
Query: 206 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
           |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 325 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 384

                                                                       
Query: 266 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
           |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 385 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 444

                                                                       
Query: 326 caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
           ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 445 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 504

                                                                       
Query: 386 cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
           |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 505 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 564

                                                                       
Query: 446 cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
               || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 565 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 624

                                                                       
Query: 506 ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
           |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 625 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 684

                        
Query: 566 caacctcgtccgc 578
           |  ||||||||||
Sbjct: 685 ctccctcgtccgc 697
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>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full
           insert sequence
          Length = 1482

 Score =  502 bits (253), Expect = e-139
 Identities = 478/553 (86%)
 Strand = Plus / Plus

                                                                       
Query: 26  ggtggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgca 85
           ||||||||||||||| || || || || || | |||||||||||| || |||||||||||
Sbjct: 250 ggtggtgcggtgctcgctgcgtgagctgcggagccgcatcgactcggtgcgcaacacgca 309

                                                                       
Query: 86  gaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggc 145
           |||||||||||||||||||| ||||||||| || |||||||| || || |||||||||||
Sbjct: 310 gaagatcacggaggcgatgaggctggtggcggcggccaaggtgcggcgggcgcaggaggc 369

                                                                       
Query: 146 cgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaacca 205
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 370 ggtggtgtcctcccgccccttctcggaggcgctggtggaggtgctctacaacatgaacca 429

                                                                       
Query: 206 ggagatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgt 265
           |||||||||| |||||||||||||||| ||||||||||||   ||| ||||||||   ||
Sbjct: 430 ggagatccagacggaggacatcgacctccccctcacccgcatccgccccgtcaagaaggt 489

                                                                       
Query: 266 cgcgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgct 325
           |||  |||||||||||||||||||||| ||||| ||||||  ||||||||||||||| ||
Sbjct: 490 cgccctcgtcgtcctcaccggcgagcgcggcctctgcggcagcttcaacaacaacgtcct 549

                                                                       
Query: 326 caagaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcat 385
           ||||||||||||| ||||||| ||||| |||| |||||| ||| |||||||||  ||| |
Sbjct: 550 caagaaggccgagacccgcatcgaggagctcaagcagctcggcctcgagtacaccgtcgt 609

                                                                       
Query: 386 cagcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccccaccgagcg 445
           |||||||||||||||||||||||||||||||   ||||||  || |||||||||||||||
Sbjct: 610 cagcgtcggcaagaagggcaacgcctacttcatccgccgccccttcatccccaccgagcg 669

                                                                       
Query: 446 cttcctcgagctcgccggcatccccaccgtcaaggactcgcaggccatttgcgaccttat 505
               || ||| |   ||||||||||||||| |||||||| ||| |||| ||||||||  |
Sbjct: 670 gacgctggaggtgaacggcatccccaccgtgaaggactcccagtccatctgcgacctcgt 729

                                                                       
Query: 506 ctactccctctttgtcgccgaggaggtcgacaaggtggagctcgtttactccaagttcgt 565
           |||||| || || ||  |||||| ||| ||||||||||||||| | ||||||||||||||
Sbjct: 730 ctactcgctgttcgtgtccgaggcggtggacaaggtggagctcctctactccaagttcgt 789

                        
Query: 566 caacctcgtccgc 578
           |  ||||||||||
Sbjct: 790 ctccctcgtccgc 802
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>gb|AY108268.1| Zea mays PCO078526 mRNA sequence
          Length = 1437

 Score =  438 bits (221), Expect = e-120
 Identities = 362/409 (88%)
 Strand = Plus / Plus

                                                                       
Query: 28  tggtgcggtgctccctccgggacctccgcaaccgcatcgactctgtccgcaacacgcaga 87
           |||||||||| |||||||| || ||||||| |||||||||||| ||| | ||||||||||
Sbjct: 196 tggtgcggtgttccctccgtgagctccgcacccgcatcgactccgtcaggaacacgcaga 255

                                                                       
Query: 88  agatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcaggaggccg 147
           ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 256 agatcacggaggccatgaagctggtggccgccgccaaggtccggcgcgcgcaggaggccg 315

                                                                       
Query: 148 tggtctcctcccgccccttctcggaggctctggtggaggtgctctacaacatgaaccagg 207
           | |||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 316 tcgtctcctctcgccctttctcggaggcgctggtggaggtgctctacaacatgaaccagg 375

                                                                       
Query: 208 agatccagtcggaggacatcgacctgcccctcacccgccagcgcgccgtcaagcgcgtcg 267
           |||||||| |||||||||||||||||||||||||||||   ||| ||||||||   || |
Sbjct: 376 agatccagacggaggacatcgacctgcccctcacccgcacccgccccgtcaagaaggtgg 435

                                                                       
Query: 268 cgatcgtcgtcctcaccggcgagcgtggcctatgcggcgccttcaacaacaacgtgctca 327
           |  |||| ||||| ||||||||||| ||||| |||||   ||||||||||||||||||||
Sbjct: 436 ccctcgtggtcctgaccggcgagcgcggcctctgcgggagcttcaacaacaacgtgctca 495

                                                                       
Query: 328 agaaggccgaggcccgcatggaggacctcaggcagctgggcgtcgagtacaaagtcatca 387
           ||||||| ||  ||||||| || || |||| |||||||||| || ||||||  ||| |||
Sbjct: 496 agaaggcggaaacccgcatcgatgagctcaagcagctgggcctccagtacaccgtcgtca 555

                                                            
Query: 388 gcgtcggcaagaagggcaacgcctacttccagcgccgcgactacatccc 436
           |||| || ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 556 gcgtggggaagaagggcaacgcctacttccagcgccgcccctacatccc 604



 Score =  115 bits (58), Expect = 2e-22
 Identities = 88/98 (89%)
 Strand = Plus / Plus

                                                                       
Query: 468 cccaccgtcaaggactcgcaggccatttgcgaccttatctactccctctttgtcgccgag 527
           |||||||||||||||||||||||||| ||||||||  ||||||| ||||| ||| |||||
Sbjct: 636 cccaccgtcaaggactcgcaggccatctgcgacctcgtctactcgctcttcgtctccgag 695

                                                 
Query: 528 gaggtcgacaaggtggagctcgtttactccaagttcgt 565
           ||||| ||||||||||||||  | ||||||||||||||
Sbjct: 696 gaggtggacaaggtggagctgctctactccaagttcgt 733
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>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete
           cds
          Length = 1772

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 78  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
           ||||| ||||||||||| || || |||||||||||||| ||||| |||||||| || || 
Sbjct: 171 aacacccagaagatcaccgatgccatgaagctggtggctgccgctaaggtccgccgtgct 230

                                               
Query: 138 caggaggccgtggtctcctcccgccccttctcggag 173
           |||||||| |||||   |  ||||||||||||||||
Sbjct: 231 caggaggctgtggtgaacggccgccccttctcggag 266
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>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene,
           complete CDS
          Length = 2913

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                       
Query: 78  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
           ||||| ||||||||||| || || |||||||||||||| ||||| |||||||| || || 
Sbjct: 256 aacacccagaagatcaccgatgccatgaagctggtggctgccgctaaggtccgccgtgct 315

                                               
Query: 138 caggaggccgtggtctcctcccgccccttctcggag 173
           |||||||| |||||   |  ||||||||||||||||
Sbjct: 316 caggaggctgtggtgaacggccgccccttctcggag 351
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>emb|X76131.1|SOATPCG S.oleracea (monatol) chloroplast ATP synthase gene gamma subunit
          Length = 5616

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                        
Query: 78   aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
            ||||||||||||||||| || || |||||||| || |||||||| || ||||| || |||
Sbjct: 2213 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 2272

                                                                        
Query: 138  caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 197
            || || ||||| ||   |  |||||||||||||||| |||| || || || || ||||||
Sbjct: 2273 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 2332

                 
Query: 198  atgaa 202
            |||||
Sbjct: 2333 atgaa 2337
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>emb|Y00758.1|SOATPG Spinach plastid atpC mRNA for ATP synthase gamma-subunit
          Length = 1140

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                       
Query: 78  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
           ||||||||||||||||| || || |||||||| || |||||||| || ||||| || |||
Sbjct: 61  aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 120

                                                                       
Query: 138 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 197
           || || ||||| ||   |  |||||||||||||||| |||| || || || || ||||||
Sbjct: 121 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 180

                
Query: 198 atgaa 202
           |||||
Sbjct: 181 atgaa 185
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>emb|X17257.1|SOATPC Spinach AtpC gene for chloroplast ATP synthase gamma-subunit
          Length = 3537

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 102/125 (81%)
 Strand = Plus / Plus

                                                                       
Query: 78  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
           ||||||||||||||||| || || |||||||| || |||||||| || ||||| || |||
Sbjct: 626 aacacgcagaagatcaccgaagcaatgaagctcgtcgccgccgctaaagtccgccgtgcg 685

                                                                       
Query: 138 caggaggccgtggtctcctcccgccccttctcggaggctctggtggaggtgctctacaac 197
           || || ||||| ||   |  |||||||||||||||| |||| || || || || ||||||
Sbjct: 686 caagaagccgtcgtaaacggccgccccttctcggagactctagtcgaagttctttacaac 745

                
Query: 198 atgaa 202
           |||||
Sbjct: 746 atgaa 750
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>gb|DQ118640.1| Pavlova lutheri isolate 481 chloroplast ATP sythase gamma mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 2168

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                       
Query: 78  aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
           |||||| |||||||||||  |||||||||||| || || ||||||||||| || ||||||
Sbjct: 170 aacacgaagaagatcacgtcggcgatgaagctcgtcgcggccgccaaggtgcgccgcgcg 229

                
Query: 138 cagga 142
           |||||
Sbjct: 230 cagga 234
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>emb|Z00018.1|RBATP R.blasticus atp operon coding for the 5 subunits of F1-ATPase and
            8URFs
          Length = 12368

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 78   aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
            ||||||| |||||||||| |||||||| || |||| ||||| || ||  | |||||||||
Sbjct: 7573 aacacgcggaagatcacgaaggcgatgcagatggtcgccgcggcgaaacttcgtcgcgcg 7632

                 
Query: 138  cagga 142
            |||||
Sbjct: 7633 cagga 7637
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>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma
           subunit mRNA, partial cds; nuclear gene for chloroplast
           product
          Length = 900

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 114 gccgccgccaaggtccgtcgcgcgcaggaggcc 146
           |||||||||||||| || |||||||||||||||
Sbjct: 188 gccgccgccaaggttcgccgcgcgcaggaggcc 220
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>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                          
Query: 81     acgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcag 140
              ||||||||||||||  |||| ||| || ||||||||||| ||||| | || |||||||||
Sbjct: 486700 acgcagaagatcaccaaggccatgcagatggtggccgcctccaagcttcgccgcgcgcag 486759
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>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 81     acgcagaagatcacggaggcgatgaagctggtggccgcc 119
              ||||||||||||||  |||||||| || |||||||||||
Sbjct: 197103 acgcagaagatcaccaaggcgatgcagatggtggccgcc 197065
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>ref|XM_653752.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1240.2), mRNA
          Length = 3348

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 135  gcgcaggaggccgtggtctcct 156
            ||||||||||||||||||||||
Sbjct: 1380 gcgcaggaggccgtggtctcct 1359
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>emb|AL591792.1|SME591792 Sinorhizobium meliloti 1021 complete chromosome; segment 11/12
          Length = 333800

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 81     acgcagaagatcacggaggcgatgaagctggtggccgc 118
              ||||||||||||||  ||||||||||| |||| |||||
Sbjct: 246917 acgcagaagatcaccaaggcgatgaagatggtcgccgc 246880
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 281    caccggcgagcgtggcctatgcggcgccttcaac 314
              |||||||||||| ||||| | |||||||||||||
Sbjct: 586812 caccggcgagcgcggcctgtccggcgccttcaac 586779
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>ref|XM_505851.1| Yarrowia lipolytica CLIB122, YALI0F25025g predicted mRNA
          Length = 720

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 317 caacgtgctcaagaaggccgaggccc 342
           ||||||||||||||||| ||||||||
Sbjct: 621 caacgtgctcaagaagggcgaggccc 646
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                
Query: 281    caccggcgagcgtggcctatgcggcgccttcaac 314
              |||||||||||||||||| | |||||| ||||||
Sbjct: 631869 caccggcgagcgtggcctgtccggcgcgttcaac 631902
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 86      gaagatcacggaggcgatgaagctgg 111
               |||||||||||| |||||||||||||
Sbjct: 2677233 gaagatcacggaagcgatgaagctgg 2677208
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>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase
          Length = 1327

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 85  agaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcagga 142
           ||||||||||   ||| |||||||| || || ||||||||||||||||| || |||||
Sbjct: 243 agaagatcaccatggccatgaagcttgtcgctgccgccaaggtccgtcgtgctcagga 300



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 391 tcggcaagaagggcaacgcctacttccagcgccgcg 426
           |||| |||||||||| | ||||||||||||| ||||
Sbjct: 549 tcggaaagaagggcatcacctacttccagcgtcgcg 584
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 515    ctttgtcgccgaggaggtcgac 536
              ||||||||||||||||||||||
Sbjct: 738800 ctttgtcgccgaggaggtcgac 738821
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                
Query: 281    caccggcgagcgtggcctatgcggcgccttcaac 314
              |||||||||||| ||||| | |||||||||||||
Sbjct: 475979 caccggcgagcgcggcctgtccggcgccttcaac 475946
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 317     caacgtgctcaagaaggccgaggccc 342
               ||||||||||||||||| ||||||||
Sbjct: 3235980 caacgtgctcaagaagggcgaggccc 3236005
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                          
Query: 78     aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
              |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 120264 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 120323

                   
Query: 138    cagga 142
              |||||
Sbjct: 120324 cagga 120328
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                          
Query: 78     aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
              |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 185175 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 185116

                   
Query: 138    cagga 142
              |||||
Sbjct: 185115 cagga 185111
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>gb|AF515783.1| Aplysia californica neurite outgrowth regulated kinase (Nork) mRNA,
            complete cds
          Length = 3126

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 219  gaggacatcgacctgcccctcaccc 243
            |||||||||||| ||||||||||||
Sbjct: 2782 gaggacatcgacgtgcccctcaccc 2806
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 78      aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
               |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 4036947 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 4036888

                    
Query: 138     cagga 142
               |||||
Sbjct: 4036887 cagga 4036883
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>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 305    cgccttcaacaacaacgtgct 325
              |||||||||||||||||||||
Sbjct: 108019 cgccttcaacaacaacgtgct 107999
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 81      acgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcgcag 140
               ||||||||||||||  ||||||||||  |||| ||||| || ||| | || || ||||||
Sbjct: 4103056 acgcagaagatcaccaaggcgatgaaaatggtcgccgcggcgaagcttcggcgtgcgcag 4102997

                    
Query: 141     gaggc 145
               |||||
Sbjct: 4102996 gaggc 4102992
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 81     acgcagaagatcacggaggcgatgaagctggtggccgccgccaag 125
              ||||||||||||||  |||||||| || |||| |||||| |||||
Sbjct: 300262 acgcagaagatcaccaaggcgatgcagatggtcgccgcctccaag 300218



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 246     cagcgcgccgtcaagcgcgtcgcg 269
               |||||||||||| |||||||||||
Sbjct: 1421600 cagcgcgccgtcgagcgcgtcgcg 1421577
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 230     cctgcccctcacccgccagcgcgcc 254
               |||||||| ||||||||||||||||
Sbjct: 2248557 cctgccccgcacccgccagcgcgcc 2248533



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 519     gtcgccgaggaggtcgacaa 538
               ||||||||||||||||||||
Sbjct: 5447968 gtcgccgaggaggtcgacaa 5447949
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                           
Query: 78      aacacgcagaagatcacggaggcgatgaagctggtggccgccgccaaggtccgtcgcgcg 137
               |||||||  ||||||||| |||||||| || ||||||||||  | ||| | || ||||||
Sbjct: 3771921 aacacgcgcaagatcacgaaggcgatggagatggtggccgcatcgaagatgcgccgcgcg 3771862

                    
Query: 138     cagga 142
               |||||
Sbjct: 3771861 cagga 3771857
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  ctcaagaaggccgaggcccg 343
            ||||||||||||||||||||
Sbjct: 7677 ctcaagaaggccgaggcccg 7696
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>ref|XM_512476.1| PREDICTED: Pan troglodytes myosin IXB (LOC455820), mRNA
          Length = 3700

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gaagctggtggccgccgcca 123
            ||||||||||||||||||||
Sbjct: 2011 gaagctggtggccgccgcca 2030
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>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence
          Length = 183990

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     cggcagcagcctggtggtgcggtg 37
              |||||||||| |||||||||||||
Sbjct: 108746 cggcagcagcatggtggtgcggtg 108723
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    tcgccgaggaggtcgacaag 539
              ||||||||||||||||||||
Sbjct: 511208 tcgccgaggaggtcgacaag 511189
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>ref|NM_004145.2| Homo sapiens myosin IXB (MYO9B), mRNA
          Length = 7488

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gaagctggtggccgccgcca 123
            ||||||||||||||||||||
Sbjct: 3948 gaagctggtggccgccgcca 3967
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>gb|DQ481115.1| Uncultured bacterium clone RT-250_16 membrane bound nitrate
           reductase (narG) gene, partial cds
          Length = 645

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 103 tgaagctggtggccgccgccaagg 126
           |||| |||||||||||||||||||
Sbjct: 254 tgaaactggtggccgccgccaagg 277
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>gb|DQ356948.1| Crocodilepox virus, complete genome
          Length = 190054

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 559    agttcgtcaacctcgtccgc 578
              ||||||||||||||||||||
Sbjct: 130640 agttcgtcaacctcgtccgc 130659
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>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens
              quinquefasciatus-3940128D9, complete sequence
          Length = 128585

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    gaagctggtggccgccgccaaggt 127
              ||||||||||||||||| ||||||
Sbjct: 100372 gaagctggtggccgccggcaaggt 100395
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>gb|AY174086.1| Pisolithus sp. W48 SSR P9 sequence
          Length = 305

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 271 tcgtcgtcctcaccggcgag 290
           ||||||||||||||||||||
Sbjct: 271 tcgtcgtcctcaccggcgag 252
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>gb|AC142394.19| Medicago truncatula clone mth2-11d4, complete sequence
          Length = 111262

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 114   gccgccgccaaggtccgtcgcgcgcaggaggccgtggtctcctcccgccccttctc 169
             ||||||||||  ||||||||||| || || |||||  ||  |||||||||||||||
Sbjct: 87541 gccgccgccagagtccgtcgcgcacaagaagccgttatcaactcccgccccttctc 87596
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>gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence
          Length = 188318

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 456    ctcgccggcatccccaccgtcaag 479
              |||||||||||| |||||||||||
Sbjct: 142324 ctcgccggcatcaccaccgtcaag 142347
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>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13
          Length = 342416

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    tcgccgaggaggtcgacaag 539
              ||||||||||||||||||||
Sbjct: 167852 tcgccgaggaggtcgacaag 167833
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gcagcagcctggtggtgcgg 35
             ||||||||||||||||||||
Sbjct: 39950 gcagcagcctggtggtgcgg 39931
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gcagcagcctggtggtgcgg 35
              ||||||||||||||||||||
Sbjct: 303828 gcagcagcctggtggtgcgg 303809
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>emb|BX640421.1| Bordetella pertussis strain Tohama I, complete genome; segment 11/12
          Length = 349726

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     gcagcagcctggtggtgcgg 35
              ||||||||||||||||||||
Sbjct: 274890 gcagcagcctggtggtgcgg 274871
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>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14
          Length = 324050

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 520    tcgccgaggaggtcgacaag 539
              ||||||||||||||||||||
Sbjct: 167778 tcgccgaggaggtcgacaag 167759
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 408    gcctacttccagcgccgcgactac 431
              ||||| ||||||||||||||||||
Sbjct: 297085 gcctatttccagcgccgcgactac 297062
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>gb|AC020913.9| Homo sapiens chromosome 19 clone CTD-3032J10, complete sequence
          Length = 117751

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gaagctggtggccgccgcca 123
             ||||||||||||||||||||
Sbjct: 92366 gaagctggtggccgccgcca 92385
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>gb|AC147435.22| Medicago truncatula clone mth2-19c18, complete sequence
          Length = 137284

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 114   gccgccgccaaggtccgtcgcgcgcaggaggccgtggtctcctcccgccccttctc 169
             ||||||||||  ||||||||||| || || |||||  ||  |||||||||||||||
Sbjct: 77876 gccgccgccagagtccgtcgcgcacaagaagccgttatcaactcccgccccttctc 77931
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>gb|AF333761.1|AF333761 Rhodococcus ruber putative two-component system regulatory protein,
           partial cds; putative integral membrane protein and
           putative sodium:solute symporter, EthR (ethR), EthA
           (ethA), EthB (ethB), EthC (ethC), EthD (ethD), complete
           cds; class II transposon insertion sequence IS3
           transposase (tnpX) and transposase TnpA (tnpA) genes,
           complete cds; putative membrane protein gene, partial
           cds; and unknown genes
          Length = 23656

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 449 cctcgagctcgccggcatcc 468
           ||||||||||||||||||||
Sbjct: 306 cctcgagctcgccggcatcc 325
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>gb|AF124816.1|AF124816 Mentha x piperita cytochrome p450 isoform PM17 mRNA, complete cds
          Length = 1503

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  ggaggcgatgaagctggtgg 114
           ||||||||||||||||||||
Sbjct: 270 ggaggcgatgaagctggtgg 289
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 72   gtccgcaacacgcagaagatcacg 95
            ||||||||||| ||||||||||||
Sbjct: 8433 gtccgcaacacccagaagatcacg 8456
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>dbj|AB209997.1| Homo sapiens mRNA for MYO9B variant protein, partial cds, clone:
            ef05385
          Length = 7607

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gaagctggtggccgccgcca 123
            ||||||||||||||||||||
Sbjct: 4095 gaagctggtggccgccgcca 4114
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>gb|AF194439.1|AF194439 Rattus norvegicus SMDF neuregulin alpha 2a (Nrg1) mRNA, complete
          cds, alternatively spliced
          Length = 2540

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  attcggcacgaggcggcagc 20
          ||||||||||||||||||||
Sbjct: 3  attcggcacgaggcggcagc 22
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 112     tggccgccgccaaggtccgt 131
               ||||||||||||||||||||
Sbjct: 3031382 tggccgccgccaaggtccgt 3031401



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 230     cctgcccctcacccgccagc 249
               ||||||||||||||||||||
Sbjct: 1698231 cctgcccctcacccgccagc 1698212
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>gb|AE005129.1| Halobacterium sp. NRC-1 section 160 of 170 of the complete genome
          Length = 18209

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 439  ccgagcgcttcctcgagctcgccg 462
            |||||||||||| |||||||||||
Sbjct: 3354 ccgagcgcttccgcgagctcgccg 3331
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 247     agcgcgccgtcaagcgcgtc 266
               ||||||||||||||||||||
Sbjct: 2975079 agcgcgccgtcaagcgcgtc 2975098



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 241     cccgccagcgcgccgtcaagcgcg 264
               ||||||||||||||| ||||||||
Sbjct: 2608830 cccgccagcgcgccggcaagcgcg 2608853
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 520     tcgccgaggaggtcgacaag 539
               ||||||||||||||||||||
Sbjct: 4376645 tcgccgaggaggtcgacaag 4376626
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>gb|U42391.1|HSU42391 Human myosin-IXb mRNA, complete cds
          Length = 6069

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gaagctggtggccgccgcca 123
            ||||||||||||||||||||
Sbjct: 3948 gaagctggtggccgccgcca 3967
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>gb|AD000014.1|MSGY423 Mycobacterium tuberculosis sequence from clone y423
          Length = 42741

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   tcgccgaggaggtcgacaag 539
             ||||||||||||||||||||
Sbjct: 41926 tcgccgaggaggtcgacaag 41945


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,545,243
Number of Sequences: 3902068
Number of extensions: 3545243
Number of successful extensions: 74659
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 71592
Number of HSP's gapped (non-prelim): 3063
length of query: 578
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 555
effective length of database: 17,143,297,704
effective search space: 9514530225720
effective search space used: 9514530225720
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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