>SRG15_CAEEL (Q18428) Serpentine receptor class gamma-15 (Protein srg-15)|
          Length = 320

 Score = 32.7 bits (73), Expect = 0.92
 Identities = 18/55 (32%), Positives = 32/55 (58%)
 Frame = -2

Query: 613 ILFTSLITSVGMFPALVLDFNMDKADETFS*INFFACSLNMSAATSSKSLYASCT 449
           ++FT + TSV ++  + L   +  A+++    N +  SL   AA +S++LYA CT
Sbjct: 207 LVFTFICTSVTLYKLISLSDRIKSAEKSLCFSNIYI-SLTFLAAAASQALYAFCT 260

>XYLR_STAXY (P27159) Xylose repressor|
          Length = 383

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = +3

Query: 450 VQLAYKLFDEVAADMFKEHAKKLIQENVSSALSILKSN 563
           V+L Y  FD   A + K+ + +L  +NVSS L ILKSN
Sbjct: 91  VELMYNYFD---ATILKQDSYELNDKNVSSILQILKSN 125

>YFFQ_ECOLI (P76548) Hypothetical protein yffQ|
          Length = 130

 Score = 30.8 bits (68), Expect = 3.5
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = +3

Query: 423 IGTLIEVRRVQLAYKLFDEVAADMFKEHAKKLIQENVSSALSIL-KSNTSAGNIPTE 590
           I TL +   + + Y  FD++AA   K   KK+++EN    +++L K    AG I  E
Sbjct: 66  IATLCKPVALVIIYDRFDDIAAIPLKVTLKKVLKENSDEKINLLNKMGDLAGRIVAE 122

>DEGP_RICCN (Q92JA1) Probable serine protease do-like precursor (EC 3.4.21.-)|
          Length = 508

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
 Frame = +3

Query: 351 DIAMRENAKSLYALELKSIGRGLDIGTLIEVRRVQLAYKLF---DEVAADMFKEHAKKLI 521
           DI ++   K    +    I + + +  L + + ++L  K+    +EV  D  +E  KK I
Sbjct: 347 DIPVKNTKKLRVIIADAPIDQEVKVKILRDKKELELPIKITSDNEEVTKDSTEETNKKEI 406

Query: 522 QENVSSALSILKSNTSAGNIPTEV 593
                + LSI K+N + GN+  E+
Sbjct: 407 TNKEENNLSITKNNITFGNLTEEL 430

>RRPL_PUUMH (P27176) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2156

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 21/76 (27%), Positives = 34/76 (44%)
 Frame = +2

Query: 98  YASFVYSVLPPGHEDLKGTEVEAIKKFKKALGLDDVDAANW*TLIQRETRCIPKVNFCVE 277
           Y S +  +LP    ++ G+ +     FK+ LGL D D  +    I   T C  K+   + 
Sbjct: 505 YGSVLLCILPSKSLEVAGSFIRFFTVFKEGLGLIDADNLDSKVEIDGVTWCFSKI---IS 561

Query: 278 SCLRRCIRLHTSMETS 325
             L R + L+ + E S
Sbjct: 562 LDLNRLLALNIAFEKS 577


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,399,291
Number of Sequences: 219361
Number of extensions: 1579246
Number of successful extensions: 4535
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4534
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)