>ref|NM_197133.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner
            envelope protein (OSJNBa0051D19.7), mRNA
          Length = 2967

 Score =  256 bits (129), Expect = 8e-65
 Identities = 234/269 (86%)
 Strand = Plus / Plus

                                                                        
Query: 276  aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 335
            ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 736  aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 795

                                                                        
Query: 336  acggactatcagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagag 395
            || || | |||||||||||||||||||||||| ||||||||||   ||||||| | | | 
Sbjct: 796  actgattctcagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaa 855

                                                                        
Query: 396  ctcaagtctattggaagaggtcttgacataggcacgctcattgaagtgaggagagtacaa 455
            |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||
Sbjct: 856  ctcaagtctattgggagaggtcttgacataggcacgcttatcgaagtaaggagagcacaa 915

                                                                        
Query: 456  cttgcatataaactttttgatgaggttgctgctgacatgttcaaggagcatgcgaagaag 515
            |||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 916  cttgcatacaaactttctgatgagattgctgctgagatgttcaaggagcatgcaaagaag 975

                                         
Query: 516  ttgattcaagaaaacgtttcatctgcttt 544
            ||| ||||||||||| |||| || |||||
Sbjct: 976  ttggttcaagaaaacatttcgtcagcttt 1004



 Score =  188 bits (95), Expect = 2e-44
 Identities = 170/195 (87%)
 Strand = Plus / Plus

                                                                       
Query: 23  gaggtggcggccatcgcgagcaaatatggagtcagtacacaagatgcagcattcaaatca 82
           ||||||| |||| |||||| |||||||||||| |||||||| || ||||| |||||| ||
Sbjct: 502 gaggtggaggccctcgcgaccaaatatggagttagtacacaggacgcagccttcaaagca 561

                                                                       
Query: 83  gagctctgtgacctgtatgccagctttgtttactcagtacttcctccaggacatgaagat 142
           |||||||||||  |||||||||| ||| ||||||||||||||||||||||| ||||||||
Sbjct: 562 gagctctgtgatttgtatgccaggtttctttactcagtacttcctccaggagatgaagat 621

                                                                       
Query: 143 ctcaaaggtactgaggttgaagctattaaaaagttcaaaaaagctcttggactcgatgat 202
           |||||||||  ||||||| |  | |||| ||| || ||||| |||||||| |||||||||
Sbjct: 622 ctcaaaggtgatgaggttcagaccattataaaatttaaaaatgctcttgggctcgatgat 681

                          
Query: 203 gtggatgctgcaaat 217
           || ||||||||||||
Sbjct: 682 gtagatgctgcaaat 696

>dbj|AK064354.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-A12, full
           insert sequence
          Length = 1967

 Score =  248 bits (125), Expect = 2e-62
 Identities = 233/269 (86%)
 Strand = Plus / Plus

                                                                       
Query: 276 aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 335
           ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 134 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 193

                                                                       
Query: 336 acggactatcagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagag 395
           || || | |||||||||||||||||||||||| ||||||||||   ||||||| | | | 
Sbjct: 194 actgattctcagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaa 253

                                                                       
Query: 396 ctcaagtctattggaagaggtcttgacataggcacgctcattgaagtgaggagagtacaa 455
           |||||||||||||| ||||||||||||||||||||||| || ||||| ||||||| ||||
Sbjct: 254 ctcaagtctattgggagaggtcttgacataggcacgcttatcgaagtaaggagagcacaa 313

                                                                       
Query: 456 cttgcatataaactttttgatgaggttgctgctgacatgttcaaggagcatgcgaagaag 515
           |||||||| ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 314 cttgcatacaaactttctgatgagattgctgctgagatgttcaaggagcatgcaaagaag 373

                                        
Query: 516 ttgattcaagaaaacgtttcatctgcttt 544
           |||  |||||||||| |||| || |||||
Sbjct: 374 ttggctcaagaaaacatttcgtcagcttt 402



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 194 ctcgatgatgtggatgctgcaaat 217
           ||||||||||| ||||||||||||
Sbjct: 2   ctcgatgatgtagatgctgcaaat 25

>ref|NM_197135.1| Oryza sativa (japonica cultivar-group) putative chloroplast inner
           envelope protein (OSJNBa0051D19.5), mRNA
          Length = 1692

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                       
Query: 307 tacttccatggaaacatcttttcgggatcacggactatcagattgatattgctatgcggg 366
           ||||||||||||||| |||||||||| |    || | |||||| ||   || |||| |||
Sbjct: 755 tacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgaggg 814

                                                                       
Query: 367 agaatgccaaaagtctatatgcgttagagctcaagtctattggaagaggtcttgacatag 426
           | | |||||| ||| ||||||| | |  ||||||||||||||| ||||||||||||||||
Sbjct: 815 aaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacatag 874

                                                                       
Query: 427 gcacgctcattgaagtgaggagagtacaacttgcatataaactttttgatgaggttgctg 486
           ||||  | |||||||| ||||||  |||||| ||||||||||||| ||||||| ||||| 
Sbjct: 875 gcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgctt 934

                                                             
Query: 487 ctgacatgttcaaggagcatgcgaagaagttgattcaagaaaacgtttca 536
           |||| ||||||| ||||||||| ||||||||  || |||||||| |||||
Sbjct: 935 ctgagatgttcagggagcatgcaaagaagttagttgaagaaaacatttca 984



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 158/195 (81%)
 Strand = Plus / Plus

                                                                       
Query: 23  gaggtggcggccatcgcgagcaaatatggagtcagtacacaagatgcagcattcaaatca 82
           ||||||| |||||||||||||||||| || || || ||| | |||||| | |||||  | 
Sbjct: 445 gaggtggaggccatcgcgagcaaatacggcgttagcacagaggatgcaaccttcaaggcc 504

                                                                       
Query: 83  gagctctgtgacctgtatgccagctttgtttactcagtacttcctccaggacatgaagat 142
           |||||||||||  |||||| ||| ||||||| |||| || ||| ||||||| ||||||| 
Sbjct: 505 gagctctgtgatttgtatggcaggtttgttttctcattaattcatccaggatatgaagac 564

                                                                       
Query: 143 ctcaaaggtactgaggttgaagctattaaaaagttcaaaaaagctcttggactcgatgat 202
           ||  |||||||||| |||||  |||||| |||||| ||||| || |||||  |  |||||
Sbjct: 565 cttgaaggtactgaagttgagactattataaagtttaaaaaggcccttgggttgaatgat 624

                          
Query: 203 gtggatgctgcaaat 217
            | ||||||||||||
Sbjct: 625 atagatgctgcaaat 639

>dbj|AK120578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135E03, full
           insert sequence
          Length = 1669

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                       
Query: 307 tacttccatggaaacatcttttcgggatcacggactatcagattgatattgctatgcggg 366
           ||||||||||||||| |||||||||| |    || | |||||| ||   || |||| |||
Sbjct: 754 tacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgaggg 813

                                                                       
Query: 367 agaatgccaaaagtctatatgcgttagagctcaagtctattggaagaggtcttgacatag 426
           | | |||||| ||| ||||||| | |  ||||||||||||||| ||||||||||||||||
Sbjct: 814 aaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacatag 873

                                                                       
Query: 427 gcacgctcattgaagtgaggagagtacaacttgcatataaactttttgatgaggttgctg 486
           ||||  | |||||||| ||||||  |||||| ||||||||||||| ||||||| ||||| 
Sbjct: 874 gcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgctt 933

                                                             
Query: 487 ctgacatgttcaaggagcatgcgaagaagttgattcaagaaaacgtttca 536
           |||| ||||||| ||||||||| ||||||||  || |||||||| |||||
Sbjct: 934 ctgagatgttcagggagcatgcaaagaagttagttgaagaaaacatttca 983



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 157/195 (80%)
 Strand = Plus / Plus

                                                                       
Query: 23  gaggtggcggccatcgcgagcaaatatggagtcagtacacaagatgcagcattcaaatca 82
           ||||||| |||||||||||||||||| || || || ||| | |||||| | |||||  | 
Sbjct: 444 gaggtggaggccatcgcgagcaaatacggcgttagcacagaggatgcaaccttcaaggcc 503

                                                                       
Query: 83  gagctctgtgacctgtatgccagctttgtttactcagtacttcctccaggacatgaagat 142
           |||||||||||  ||| || ||| ||||||| |||| || ||| ||||||| ||||||| 
Sbjct: 504 gagctctgtgatttgtttggcaggtttgttttctcattaattcatccaggatatgaagac 563

                                                                       
Query: 143 ctcaaaggtactgaggttgaagctattaaaaagttcaaaaaagctcttggactcgatgat 202
           ||  |||||||||| |||||  |||||| |||||| ||||| || |||||  |  |||||
Sbjct: 564 cttgaaggtactgaagttgagactattataaagtttaaaaaggcccttgggttgaatgat 623

                          
Query: 203 gtggatgctgcaaat 217
            | ||||||||||||
Sbjct: 624 atagatgctgcaaat 638

>dbj|AK120231.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043E07, full
           insert sequence
          Length = 2003

 Score =  139 bits (70), Expect = 1e-29
 Identities = 190/230 (82%)
 Strand = Plus / Plus

                                                                       
Query: 307 tacttccatggaaacatcttttcgggatcacggactatcagattgatattgctatgcggg 366
           ||||||||||||||| |||||||||| |    || | |||||| ||   || |||| |||
Sbjct: 616 tacttccatggaaacgtcttttcggggttcatgaatctcagatagacgatgttatgaggg 675

                                                                       
Query: 367 agaatgccaaaagtctatatgcgttagagctcaagtctattggaagaggtcttgacatag 426
           | | |||||| ||| ||||||| | |  ||||||||||||||| ||||||||||||||||
Sbjct: 676 aaagtgccaagagtttatatgcatcattgctcaagtctattgggagaggtcttgacatag 735

                                                                       
Query: 427 gcacgctcattgaagtgaggagagtacaacttgcatataaactttttgatgaggttgctg 486
           ||||  | |||||||| ||||||  |||||| ||||||||||||| ||||||| ||||| 
Sbjct: 736 gcacattaattgaagtaaggagatcacaactagcatataaactttctgatgagattgctt 795

                                                             
Query: 487 ctgacatgttcaaggagcatgcgaagaagttgattcaagaaaacgtttca 536
           |||| ||||||| ||||||||| ||||||||  || |||||||| |||||
Sbjct: 796 ctgagatgttcagggagcatgcaaagaagttagttgaagaaaacatttca 845



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 158/196 (80%), Gaps = 1/196 (0%)
 Strand = Plus / Plus

                                                                       
Query: 23  gaggtggcggccatcgcgagcaaatatggagtcagtacacaagatgcagcattcaaat-c 81
           ||||||| |||||||||||||||||| || || || ||| | |||||| | |||||   |
Sbjct: 305 gaggtggaggccatcgcgagcaaatacggcgttagcacagaggatgcaaccttcaagggc 364

                                                                       
Query: 82  agagctctgtgacctgtatgccagctttgtttactcagtacttcctccaggacatgaaga 141
            |||||||||||  |||||| ||| ||||||| |||| || ||| ||||||| |||||||
Sbjct: 365 cgagctctgtgatttgtatggcaggtttgttttctcattaattcatccaggatatgaaga 424

                                                                       
Query: 142 tctcaaaggtactgaggttgaagctattaaaaagttcaaaaaagctcttggactcgatga 201
            ||  |||||||||| |||||  |||||| |||||| ||||| || |||||  |  ||||
Sbjct: 425 ccttgaaggtactgaagttgagactattataaagtttaaaaaggcccttgggttgaatga 484

                           
Query: 202 tgtggatgctgcaaat 217
           | | ||||||||||||
Sbjct: 485 tatagatgctgcaaat 500

>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
             sequence
          Length = 131984

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                         
Query: 102   ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 161
             |||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 51715 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 51774

                                                                     
Query: 162   aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 217
             |  | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 51775 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 51830



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Plus

                                                                         
Query: 413   aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 472
             ||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||| 
Sbjct: 53165 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 53224

                      
Query: 473   tgatgaggt 481
             |||||||||
Sbjct: 53225 tgatgaggt 53233



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Plus

                                                                         
Query: 481   ttgctgctgacatgttcaaggagcatgcgaagaagttgattcaagaaaacgtttcatctg 540
             |||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||| || |
Sbjct: 53474 ttgctgctgagatgttcaaggagcatgcaaagaagttggttcaagaaaacatttcgtcag 53533

                 
Query: 541   cttt 544
             ||||
Sbjct: 53534 cttt 53537



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 413   aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 472
             ||||||||||||||||||  | |||||||| ||||||  |||||| ||||||||||||| 
Sbjct: 38434 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 38493

                      
Query: 473   tgatgaggt 481
             |||||||||
Sbjct: 38494 tgatgaggt 38502



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Plus

                                                                         
Query: 345   cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 404
             ||||||||||||||||||||||| ||||||||||   ||||||| | | | |||||||||
Sbjct: 52892 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 52951

                         
Query: 405   attggaagaggt 416
             ||||| ||||||
Sbjct: 52952 attgggagaggt 52963



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                         
Query: 46    atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 105
             ||||||||| |||||||| || ||||| |||||| |||||||||||||  ||||||||||
Sbjct: 50562 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 50621



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Plus

                                                                         
Query: 102   ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 161
             |||| ||||||| |||| || ||| ||||||| ||||||| ||  |||||||||| ||||
Sbjct: 35946 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 36005

                                                                     
Query: 162   aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 217
             |  |||||| |||||| ||||| || |||||  |  ||||| | ||||||||||||
Sbjct: 36006 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 36061



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 276   aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 335
             ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 52140 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 52199

               
Query: 336   ac 337
             ||
Sbjct: 52200 ac 52201



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 307   tacttccatggaaacatcttttcggg 332
             ||||||||||||||| ||||||||||
Sbjct: 36392 tacttccatggaaacgtcttttcggg 36417

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 102      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 161
                |||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 18161413 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 18161354

                                                                        
Query: 162      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 217
                |  | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 18161353 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 18161298



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 413      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 472
                ||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||| 
Sbjct: 18159963 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 18159904

                         
Query: 473      tgatgaggt 481
                |||||||||
Sbjct: 18159903 tgatgaggt 18159895



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 481      ttgctgctgacatgttcaaggagcatgcgaagaagttgattcaagaaaacgtttcatctg 540
                |||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||| || |
Sbjct: 18159654 ttgctgctgagatgttcaaggagcatgcaaagaagttggttcaagaaaacatttcgtcag 18159595

                    
Query: 541      cttt 544
                ||||
Sbjct: 18159594 cttt 18159591



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 413      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 472
                ||||||||||||||||||  | |||||||| ||||||  |||||| ||||||||||||| 
Sbjct: 18174694 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 18174635

                         
Query: 473      tgatgaggt 481
                |||||||||
Sbjct: 18174634 tgatgaggt 18174626



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 345      cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 404
                ||||||||||||||||||||||| ||||||||||   ||||||| | | | |||||||||
Sbjct: 18160236 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 18160177

                            
Query: 405      attggaagaggt 416
                ||||| ||||||
Sbjct: 18160176 attgggagaggt 18160165



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 46       atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 105
                ||||||||| |||||||| || ||||| |||||| |||||||||||||  ||||||||||
Sbjct: 18162566 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 18162507



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 102      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 161
                |||| ||||||| |||| || ||| ||||||| ||||||| ||  |||||||||| ||||
Sbjct: 18177182 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 18177123

                                                                        
Query: 162      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 217
                |  |||||| |||||| ||||| || |||||  |  ||||| | ||||||||||||
Sbjct: 18177122 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 18177067



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 307      tacttccatggaaacatcttttcggg 332
                ||||||||||||||| ||||||||||
Sbjct: 18176736 tacttccatggaaacgtcttttcggg 18176711



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 276      aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 335
                ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 18160988 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 18160929

                  
Query: 336      ac 337
                ||
Sbjct: 18160928 ac 18160927

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Minus

                                                                            
Query: 102      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 161
                |||| ||| ||||||||||||||||||||||| |||||||||||||||||  ||||||| 
Sbjct: 18170666 ccaggtttctttactcagtacttcctccaggagatgaagatctcaaaggtgatgaggttc 18170607

                                                                        
Query: 162      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 217
                |  | |||| ||| || ||||| |||||||| ||||||||||| ||||||||||||
Sbjct: 18170606 agaccattataaaatttaaaaatgctcttgggctcgatgatgtagatgctgcaaat 18170551



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 63/69 (91%)
 Strand = Plus / Minus

                                                                            
Query: 413      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 472
                ||||||||||||||||||||| || ||||| ||||||| |||||||||||| ||||||| 
Sbjct: 18169216 aggtcttgacataggcacgcttatcgaagtaaggagagcacaacttgcatacaaactttc 18169157

                         
Query: 473      tgatgaggt 481
                |||||||||
Sbjct: 18169156 tgatgaggt 18169148



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                            
Query: 481      ttgctgctgacatgttcaaggagcatgcgaagaagttgattcaagaaaacgtttcatctg 540
                |||||||||| ||||||||||||||||| ||||||||| ||||||||||| |||| || |
Sbjct: 18168907 ttgctgctgagatgttcaaggagcatgcaaagaagttggttcaagaaaacatttcgtcag 18168848

                    
Query: 541      cttt 544
                ||||
Sbjct: 18168847 cttt 18168844



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 61/69 (88%)
 Strand = Plus / Minus

                                                                            
Query: 413      aggtcttgacataggcacgctcattgaagtgaggagagtacaacttgcatataaactttt 472
                ||||||||||||||||||  | |||||||| ||||||  |||||| ||||||||||||| 
Sbjct: 18183947 aggtcttgacataggcacattaattgaagtaaggagatcacaactagcatataaactttc 18183888

                         
Query: 473      tgatgaggt 481
                |||||||||
Sbjct: 18183887 tgatgaggt 18183879



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 63/72 (87%)
 Strand = Plus / Minus

                                                                            
Query: 345      cagattgatattgctatgcgggagaatgccaaaagtctatatgcgttagagctcaagtct 404
                ||||||||||||||||||||||| ||||||||||   ||||||| | | | |||||||||
Sbjct: 18169489 cagattgatattgctatgcgggaaaatgccaaaatcttatatgcatcacaactcaagtct 18169430

                            
Query: 405      attggaagaggt 416
                ||||| ||||||
Sbjct: 18169429 attgggagaggt 18169418



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                            
Query: 46       atatggagtcagtacacaagatgcagcattcaaatcagagctctgtgacctgtatgccag 105
                ||||||||| |||||||| || ||||| |||||| |||||||||||||  ||||||||||
Sbjct: 18171819 atatggagttagtacacaggacgcagccttcaaagcagagctctgtgatttgtatgccag 18171760



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 102      ccagctttgtttactcagtacttcctccaggacatgaagatctcaaaggtactgaggttg 161
                |||| ||||||| |||| || ||| ||||||| ||||||| ||  |||||||||| ||||
Sbjct: 18186435 ccaggtttgttttctcattaattcatccaggatatgaagaccttgaaggtactgaagttg 18186376

                                                                        
Query: 162      aagctattaaaaagttcaaaaaagctcttggactcgatgatgtggatgctgcaaat 217
                |  |||||| |||||| ||||| || |||||  |  ||||| | ||||||||||||
Sbjct: 18186375 agactattataaagtttaaaaaggcccttgggttgaatgatatagatgctgcaaat 18186320



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 307      tacttccatggaaacatcttttcggg 332
                ||||||||||||||| ||||||||||
Sbjct: 18185989 tacttccatggaaacgtcttttcggg 18185964



 Score = 44.1 bits (22), Expect = 0.55
 Identities = 52/62 (83%)
 Strand = Plus / Minus

                                                                            
Query: 276      aatcttgtcttcggagatgcatcagacttcatacttccatggaaacatcttttcgggatc 335
                ||||||||||| || |||||||||   ||| | ||||||||||||| |||||| ||| ||
Sbjct: 18170241 aatcttgtctttggggatgcatcaacattcctgcttccatggaaacgtctttttggggtc 18170182

                  
Query: 336      ac 337
                ||
Sbjct: 18170181 ac 18170180

>gb|AC123575.10| Medicago truncatula clone mth1-31p6, complete sequence
          Length = 83007

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                
Query: 249   gcattccaaaagttaatttttgtgtcgaatcttgtcttcggagatgcatca 299
             |||||||||||||| |||| |||||| ||| |||| || || |||||||||
Sbjct: 14724 gcattccaaaagttgatttatgtgtcaaatattgtatttggggatgcatca 14774

>gb|AC124425.3| Mus musculus BAC clone RP24-230N16 from chromosome 5, complete sequence
          Length = 178931

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 487   ctgacatgttcaaggagcatgc 508
             ||||||||||||||||||||||
Sbjct: 59051 ctgacatgttcaaggagcatgc 59030

>ref|XM_845051.1| PREDICTED: Canis familiaris hypothetical protein LOC608134
            (LOC608134), mRNA
          Length = 3231

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 5    caccgcgctggaggccgtgagg 26
            ||||||||||||||||||||||
Sbjct: 2805 caccgcgctggaggccgtgagg 2826

>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence
          Length = 398525

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 364    gggagaatgccaaaagtctat 384
              |||||||||||||||||||||
Sbjct: 111594 gggagaatgccaaaagtctat 111614

>gb|AC115904.13| Mus musculus chromosome 16, clone RP24-472P22, complete sequence
          Length = 167938

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 113    tactcagtacttcctccagga 133
              |||||||||||||||||||||
Sbjct: 141101 tactcagtacttcctccagga 141081

>gb|AC123851.4| Mus musculus BAC clone RP23-323K4 from chromosome 16, complete sequence
          Length = 230221

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 113    tactcagtacttcctccagga 133
              |||||||||||||||||||||
Sbjct: 218165 tactcagtacttcctccagga 218185

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 166      tattaaaaagttcaaaaaagc 186
                |||||||||||||||||||||
Sbjct: 16973784 tattaaaaagttcaaaaaagc 16973764



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16811535 attaaaaagttcaaaaaagc 16811554



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16804474 attaaaaagttcaaaaaagc 16804493



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16803835 attaaaaagttcaaaaaagc 16803854



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16803360 attaaaaagttcaaaaaagc 16803379



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16801450 attaaaaagttcaaaaaagc 16801469



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16799220 attaaaaagttcaaaaaagc 16799239



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16792191 attaaaaagttcaaaaaagc 16792210



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16770369 attaaaaagttcaaaaaagc 16770350



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16767819 attaaaaagttcaaaaaagc 16767800



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 167      attaaaaagttcaaaaaagc 186
                ||||||||||||||||||||
Sbjct: 16755485 attaaaaagttcaaaaaagc 16755466

>emb|BX957241.13| Zebrafish DNA sequence from clone CH211-197N10 in linkage group 19,
              complete sequence
          Length = 199001

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 203    gtggatgctgcaaattggtag 223
              |||||||||||||||||||||
Sbjct: 183076 gtggatgctgcaaattggtag 183056

>emb|BX649476.3| Zebrafish DNA sequence from clone DKEY-13I19 in linkage group 4,
             complete sequence
          Length = 126315

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 282   gtcttcggagatgcatcagacttca 306
             ||||| |||||||||||||||||||
Sbjct: 52608 gtctttggagatgcatcagacttca 52584

>gb|AC150512.3| Bos taurus  BAC CH240-319N17 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 167026

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   cttcctccaggacatgaaga 141
             ||||||||||||||||||||
Sbjct: 96257 cttcctccaggacatgaaga 96276

>gb|AC123837.5| Mus musculus BAC clone RP23-385F8 from chromosome 7, complete sequence
          Length = 208880

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   cttcctccaggacatgaaga 141
             ||||||||||||||||||||
Sbjct: 93248 cttcctccaggacatgaaga 93267

>gb|AC164411.4| Mus musculus chromosome 1, clone RP23-60E6, complete sequence
          Length = 228155

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    ctattaaaaagttcaaaaaa 184
              ||||||||||||||||||||
Sbjct: 164196 ctattaaaaagttcaaaaaa 164177

>gb|AC123863.4| Mus musculus BAC clone RP23-364A19 from chromosome 5, complete sequence
          Length = 218179

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    tttactcagtacttcctcca 130
              ||||||||||||||||||||
Sbjct: 104246 tttactcagtacttcctcca 104227

>gb|AC122721.2| Homo sapiens chromosome 5 clone RP11-91I13, complete sequence
          Length = 137867

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 344   tcagattgatattgctatgcggga 367
             |||||||||| |||||||||||||
Sbjct: 90521 tcagattgatgttgctatgcggga 90498

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    atgaggttgctgctgacatg 494
              ||||||||||||||||||||
Sbjct: 144988 atgaggttgctgctgacatg 144969

>gb|AC160646.2| Gallus gallus BAC clone CH261-24P2 from chromosome unknown, complete
              sequence
          Length = 212960

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ctgctgacatgttcaaggag 503
              ||||||||||||||||||||
Sbjct: 138917 ctgctgacatgttcaaggag 138936

>gb|AC010596.8| Homo sapiens chromosome 5 clone CTC-483B24, complete sequence
          Length = 165193

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 344  tcagattgatattgctatgcggga 367
            |||||||||| |||||||||||||
Sbjct: 6627 tcagattgatgttgctatgcggga 6604

>gb|AC151986.4| Mus musculus BAC clone RP23-365E22 from chromosome 7, complete sequence
          Length = 199337

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   cttcctccaggacatgaaga 141
             ||||||||||||||||||||
Sbjct: 44843 cttcctccaggacatgaaga 44824

>gb|AC160399.6| Mus musculus 6 BAC RP23-218B15 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 196625

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 457  ttgcatataaactttttgatgagg 480
            |||||||||| |||||||||||||
Sbjct: 9489 ttgcatataatctttttgatgagg 9466

>gb|AC115775.12| Mus musculus chromosome 8, clone RP23-125P1, complete sequence
          Length = 189510

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 251    attccaaaagttaatttttg 270
              ||||||||||||||||||||
Sbjct: 128327 attccaaaagttaatttttg 128308

>gb|AC084652.1|CBRG45O11 Caenorhabditis briggsae cosmid G45O11, complete sequence
          Length = 26703

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 609 agtatccttgcattcaatag 628
           ||||||||||||||||||||
Sbjct: 686 agtatccttgcattcaatag 705

>emb|Z68506.1|PSIEP110 P.sativum mRNA for 110 kD chloroplast inner envelope protein IEP110
          Length = 3267

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 252 ttccaaaagttaatttttgtgtcgaatcttgtcttcggagatgcatca 299
           ||||||||||| || | |||||| ||| |||| || ||||||||||||
Sbjct: 785 ttccaaaagttgatatatgtgtcaaatattgtatttggagatgcatca 832

>gb|AC133086.4| Mus musculus BAC clone RP24-110I11 from 6, complete sequence
          Length = 212696

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 457   ttgcatataaactttttgatgagg 480
             |||||||||| |||||||||||||
Sbjct: 61247 ttgcatataatctttttgatgagg 61270

>gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, complete sequence
          Length = 169085

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 165    ctattaaaaagttcaaaaaa 184
              ||||||||||||||||||||
Sbjct: 129459 ctattaaaaagttcaaaaaa 129478

>gb|U56419.1|PSU56419 Pisum sativum import intermediate associated protein 100 mRNA,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 3282

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 252 ttccaaaagttaatttttgtgtcgaatcttgtcttcggagatgcatca 299
           ||||||||||| || | |||||| ||| |||| || ||||||||||||
Sbjct: 755 ttccaaaagttgatatatgtgtcaaatattgtatttggagatgcatca 802

>gb|AC138609.4| Mus musculus BAC clone RP24-360D18 from 3, complete sequence
          Length = 151011

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   cttccatggaaacatctttt 328
             ||||||||||||||||||||
Sbjct: 21780 cttccatggaaacatctttt 21761

>emb|CT573076.1| Medicago truncatula chromosome 5 clone mth2-181d5, COMPLETE SEQUENCE
          Length = 89591

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   atgcattccaaaagttaatt 266
             ||||||||||||||||||||
Sbjct: 64290 atgcattccaaaagttaatt 64309

>dbj|AP006693.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT35C17, TM0399,
             complete sequence
          Length = 94919

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ctattaaaaagttcaaaaaa 184
             ||||||||||||||||||||
Sbjct: 65880 ctattaaaaagttcaaaaaa 65899

>gb|M96929.1|SYOCO2CMP Synechococcus sp. carbon dioxide concentrating mechanism protein
            (ccmK, ccmL and ccmM) genes, complete cds
          Length = 3557

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 475  atgaggttgctgctgacatg 494
            ||||||||||||||||||||
Sbjct: 1143 atgaggttgctgctgacatg 1162

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 475     atgaggttgctgctgacatg 494
               ||||||||||||||||||||
Sbjct: 1475812 atgaggttgctgctgacatg 1475831


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,079,313
Number of Sequences: 3902068
Number of extensions: 6079313
Number of successful extensions: 135646
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134738
Number of HSP's gapped (non-prelim): 908
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)