ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13o18 |
|---|---|
| Clone Library Name | barley_pub |
>AMOL2_MOUSE (Q8K371) Angiomotin-like protein 2| Length = 772 Score = 34.3 bits (77), Expect = 0.24 Identities = 24/64 (37%), Positives = 30/64 (46%) Frame = +3 Query: 261 QRRGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVR 440 Q+ G RP GDR+P GV+GGG Q+E + R R GH R L + R Sbjct: 120 QQAGSRPHVGDRDPRGGVSGGGR--------RQDEAL-RELRHGHVRSLSERLLQLSLER 170 Query: 441 GGER 452 G R Sbjct: 171 NGAR 174
>ECNR_CITFR (O69280) Transcriptional regulatory protein entR (Entericidin R)| Length = 199 Score = 33.9 bits (76), Expect = 0.31 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 14/115 (12%) Frame = -1 Query: 386 STRPVHPFFLGGKVPTTLVLSSASHSTLRLPISFSGAHS-----TSLHSESSGDEEALQ- 225 S+ P++PFF+ V ++L SA + S S AHS T+L++ S +EALQ Sbjct: 67 SSPPINPFFMSCGVIPLILLQSADRQHAPIAPSQSVAHSVLTKHTTLNTLSHTIQEALQV 126 Query: 224 ----ETVKNLLLPLMPPR--GIVACW--GLLLLRSTQLLAESMDWAGQAIFTFSQ 84 E KN PL+ P+ +++ W G+ S +A ++ G+ ++T+ + Sbjct: 127 RPALEIPKN-ATPLLTPQEEKVLSMWMDGV----SNNAIAAALSIHGKTVYTYKR 176
>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor| 65 kDa subunit) (U2 snRNP auxiliary factor large subunit) (U2AF65) Length = 496 Score = 33.9 bits (76), Expect = 0.31 Identities = 32/105 (30%), Positives = 40/105 (38%), Gaps = 9/105 (8%) Frame = +3 Query: 261 QRRG----VRPGEGDREPERGV-----AGGGEDQGRGNFPSQEERMDRPSREGHRRPDQH 413 QR G ++P G E E + GGGED + DR +R R D+ Sbjct: 22 QREGGLEAIQPTTGPLENEENLKSSTGGGGGEDDNDRKKRKRSRSRDRDTRRRSRSRDRG 81 Query: 414 LLHRAGGVRGGERHQLRHGGDVVRRV*EHRGAHGGAGPHLRRRGG 548 R GG GG+R + R R GG RRRGG Sbjct: 82 --ERRGGGGGGDRDRSRS---------RERRRGGGGRDEPRRRGG 115
>PP1RA_PIG (Q767K9) Serine/threonine-protein phosphatase 1 regulatory subunit 10| (MHC class I region proline-rich protein CAT53) (Protein FB19) Length = 925 Score = 33.9 bits (76), Expect = 0.31 Identities = 33/102 (32%), Positives = 38/102 (37%), Gaps = 8/102 (7%) Frame = +3 Query: 267 RGVRPGEGDREPE--RGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVR 440 RG R G P RG GGG G G+ P + S GHR + GG+ Sbjct: 726 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMSSGSGHRPHEGP----GGGMG 781 Query: 441 GGERHQLRHGGDVVRRV*EHRGAHGGAG------PHLRRRGG 548 GG R GG + H G GG G PH GG Sbjct: 782 GGHRPHEGPGGGMGGGHRPHEGPGGGMGGGSGHRPHEGPGGG 823
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 33.5 bits (75), Expect = 0.41 Identities = 31/87 (35%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Frame = +3 Query: 246 GRLRVQRRGVRPGEGDREPERGVAGGGEDQGRGNFPSQEE------RMDRPSREGHRRPD 407 G R + G R G+G +G GGE RG E+ R+DR R G RR Sbjct: 98 GGFRGGQGGSRGGQGGSRGGQGGFRGGEGGFRGRLYENEDGDERRGRLDREERGGERR-- 155 Query: 408 QHLLHRAGGVRGGERHQLRHGGDVVRR 488 L R RGGER + GG RR Sbjct: 156 -GRLDRE--ERGGERGERGDGGFARRR 179
>SALA_DROOR (P21748) Protein spalt-accessory precursor| Length = 142 Score = 33.1 bits (74), Expect = 0.53 Identities = 26/89 (29%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Frame = +3 Query: 282 GEGDREPERGVAGGGEDQGRGNFPSQ------EERMDRPSREGHRRPDQHLLHRAGGVRG 443 G+G + GV GG G+G F +Q + P GH + AG + G Sbjct: 54 GQGGVGGQLGVGQGGVSPGQGGFAAQGPPNQYQPGYGSPVGSGHFHGGNPV--DAGYIHG 111 Query: 444 GERHQLRHGGDVVRRV*EHRGAHGGAGPH 530 H GD R EH G H G H Sbjct: 112 NHHEYPEHHGDHHREHHEHHGHHEHHGHH 140
>NFAC1_HUMAN (O95644) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 943 Score = 32.7 bits (73), Expect = 0.69 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = -1 Query: 374 VHPFFLGGKVPTTLVLSSASHSTLRLPISFSGAHSTSLHSESSGDEEALQETVKNLLLPL 195 +H + + L + +A LR P +F H + + S+ EA+ K L +PL Sbjct: 463 LHGYLENEPLMLQLFIGTADDRLLR-PHAFYQVHRITGKTVSTTSHEAILSNTKVLEIPL 521 Query: 194 MPP---RGIVACWGLLLLRSTQL 135 +P R ++ C G+L LR++ + Sbjct: 522 LPENSMRAVIDCAGILKLRNSDI 544
>HCF_DROME (Q9V4C8) Host cell factor (dHcf) [Contains: HCF N-terminal chain;| HCF C-terminal chain] Length = 1500 Score = 32.7 bits (73), Expect = 0.69 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 3/73 (4%) Frame = -1 Query: 398 AVSFSTRPVHPFFLGGKVPTTL---VLSSASHSTLRLPISFSGAHSTSLHSESSGDEEAL 228 AVS +T P L +VP+T+ V+ S+S STLR+ S + +HS + S + Sbjct: 599 AVSIATSTSDP--LSVRVPSTMSANVVLSSSSSTLRIVPSVTASHSLRIASSQASGNNCR 656 Query: 227 QETVKNLLLPLMP 189 + N+L +P Sbjct: 657 SSSAINILKTALP 669
>U269_DEIRA (Q9RXP1) Protein DR0269| Length = 322 Score = 32.7 bits (73), Expect = 0.69 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%) Frame = +3 Query: 264 RRGVRPGEGDREPERGVAGGGEDQGRGNFPSQEER--MDRPSREGHRRPDQHLLHRAGGV 437 R G RP E E G GG+ G+G F +E+R R G R + GG Sbjct: 206 RGGFRPREDRGERSFGGDRGGDRGGQGGFRPREDRGGFGDRDRGGFRPREDRGERNFGGD 265 Query: 438 RGGER 452 RGG+R Sbjct: 266 RGGDR 270 Score = 31.6 bits (70), Expect = 1.5 Identities = 34/101 (33%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Frame = +3 Query: 267 RGVRPGEGDREPERGV-------AGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHR 425 RG R GDR +RG G G D+ RG F +E+R +R Sbjct: 175 RGERSFGGDRGGDRGGFRPREDRGGFGGDRDRGGFRPREDRGER---------------S 219 Query: 426 AGGVRGGERHQLRHGGDVVRRV*EHRGAHGGAGPHLRRRGG 548 GG RGG+R GG R E RG G R RGG Sbjct: 220 FGGDRGGDR-----GGQGGFRPREDRGGFGD-----RDRGG 250 Score = 30.4 bits (67), Expect = 3.4 Identities = 34/106 (32%), Positives = 40/106 (37%), Gaps = 11/106 (10%) Frame = +3 Query: 264 RRGVRPGE-GDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVR 440 R G R G+ G P G G D+ RG F +E+R +R GG R Sbjct: 140 RGGDRGGDRGGFRPREDRGGFGGDRDRGGFRPREDRGER---------------SFGGDR 184 Query: 441 GGERHQLR-------HGGDVVR---RV*EHRGAHGGAGPHLRRRGG 548 GG+R R GGD R R E RG G RGG Sbjct: 185 GGDRGGFRPREDRGGFGGDRDRGGFRPREDRGERSFGGDRGGDRGG 230 Score = 29.3 bits (64), Expect = 7.7 Identities = 21/59 (35%), Positives = 28/59 (47%) Frame = +3 Query: 264 RRGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVR 440 R G RP E E G GG+ G+G F +E+R + RE R D ++ GG R Sbjct: 248 RGGFRPREDRGERNFGGDRGGDRGGQGGFRPREDR-NFGDREFRPRTDDAQGNQEGGFR 305
>FXR1_DROME (Q9NFU0) Fragile X mental retardation syndrome-related protein 1| (dFMR1) (dfxr) Length = 684 Score = 32.7 bits (73), Expect = 0.69 Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 5/94 (5%) Frame = +3 Query: 282 GEGDREPERGVAGGGEDQGRG----NFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGE 449 G G R RG GGG G G ++ + D SR H+R Q RG Sbjct: 421 GGGQRGRVRGRGGGGPGGGNGLNQRYHNNRRDEDDYNSRGDHQRDQQ---------RG-- 469 Query: 450 RHQLRHGGDVVRRV*EHRGAHGGA-GPHLRRRGG 548 + R GGD +RG GGA GP RRGG Sbjct: 470 -YNDRGGGD---NTGSYRGGGGGAGGPGNNRRGG 499
>CD99_MOUSE (Q8VCN6) CD99 antigen precursor (Paired immunoglobin-like type 2| receptor-ligand) (PILR-L) Length = 175 Score = 32.7 bits (73), Expect = 0.69 Identities = 23/72 (31%), Positives = 28/72 (38%) Frame = +3 Query: 309 GVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQLRHGGDVVRR 488 G GGG + GN P + + RP + D L AG + GG RR Sbjct: 66 GGGGGGAGEKPGNRPQPDPKPPRPHGDSGGISDSDLADAAG----------QGGGGAGRR 115 Query: 489 V*EHRGAHGGAG 524 G HGGAG Sbjct: 116 GSGDEGGHGGAG 127
>NFAC1_PIG (O77638) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) (NFATmac) Length = 822 Score = 32.7 bits (73), Expect = 0.69 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%) Frame = -1 Query: 374 VHPFFLGGKVPTTLVLSSASHSTLRLPISFSGAHSTSLHSESSGDEEALQETVKNLLLPL 195 +H + + L + +A LR P +F H + + S+ EA+ K L +PL Sbjct: 453 LHGYVESEPLTLQLFIGTADDRLLR-PHAFYQVHRITGKTVSTTSHEAVLSNTKVLEIPL 511 Query: 194 MPP---RGIVACWGLLLLRSTQL 135 +P R I+ C G+L LR++ + Sbjct: 512 LPENNMRAIIDCAGILKLRNSDI 534
>ENPP1_HUMAN (P22413) Ectonucleotide pyrophosphatase/phosphodiesterase 1 (E-NPP| 1) (Phosphodiesterase I/nucleotide pyrophosphatase 1) (Plasma-cell membrane glycoprotein PC-1) [Includes: Alkaline phosphodiesterase I (EC 3.1.4.1); Nucleotide pyrophosphatase Length = 925 Score = 32.7 bits (73), Expect = 0.69 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 Query: 270 GVRPGEGDREPERGVAGGGEDQGRGN 347 G R GEG R P G AG G D+GR + Sbjct: 10 GSRGGEGGRAPREGPAGNGRDRGRSH 35
>Y1398_RHIME (Q92QD3) UPF0229 protein R01398| Length = 438 Score = 32.3 bits (72), Expect = 0.90 Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = +3 Query: 261 QRRGVRPGE-----GDREPERGVAGGGEDQGRGNFPSQEERMDRPSRE 389 +RR V PG GDR P+RG GG + G G S++E SRE Sbjct: 72 ERRHVLPGNREFAAGDRIPKRGSGGGAGNAGAGTGQSEDEFQFVLSRE 119
>CACB2_BOVIN (Q9MZL5) Voltage-dependent L-type calcium channel beta-2 subunit| (CAB2) (Calcium channel, voltage-dependent, beta 2 subunit) Length = 603 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +3 Query: 285 EGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREG-HRRPDQHLLHRAGGVRGGERHQ 458 +GD+ +RG G Q ++EE P ++ HR QH HR+G RG R + Sbjct: 444 QGDQRTDRGAPGRSASQ------AEEEHCPEPVKKAQHRSSTQHHNHRSGTSRGLSRQE 496
>CD2L7_CAEEL (P46551) Putative cell division cycle 2-related protein kinase 7| (EC 2.7.11.22) Length = 730 Score = 32.0 bits (71), Expect = 1.2 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 11/66 (16%) Frame = +3 Query: 234 FFVSGRLRVQRRGVRPGEGD-----------REPERGVAGGGEDQGRGNFPSQEERMDRP 380 F+ + R+GVRP + D R RG GGG D+GR +F +++ D Sbjct: 34 FYSKDKRGSSRQGVRPRDRDSKDSISPQYKQRNWSRGGGGGGRDRGRNDFSYRKKGKDYN 93 Query: 381 SREGHR 398 R R Sbjct: 94 KRRDKR 99
>AT2A1_MAKNI (P70083) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 996 Score = 31.6 bits (70), Expect = 1.5 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + + S +TLR+ S S S+ H+ES D A+ + KN+L Sbjct: 155 VGDKVPADIRIVSIKSTTLRVDQSILTGESVSVIKHTESVPDPRAVNQDKKNML 208
>NFAC1_MOUSE (O88942) Nuclear factor of activated T-cells, cytoplasmic 1 (NFAT| transcription complex cytosolic component) (NF-ATc1) (NF-ATc) Length = 717 Score = 31.6 bits (70), Expect = 1.5 Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%) Frame = -1 Query: 374 VHPFFLGGKVPTTLVLSSASHSTLRLPISFSGAHSTSLHSESSGDEEALQETVKNLLLPL 195 +H + + L + +A LR P +F H + + S+ E + K L +PL Sbjct: 464 LHGYLENEPLTLQLFIGTADDRLLR-PHAFYQVHRITGKTVSTTSHEIILSNTKVLEIPL 522 Query: 194 MPP---RGIVACWGLLLLRSTQL 135 +P R I+ C G+L LR++ + Sbjct: 523 LPENNMRAIIDCAGILKLRNSDI 545
>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated RNA-binding| fly homolog) (P19) Length = 399 Score = 31.6 bits (70), Expect = 1.5 Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 4/86 (4%) Frame = +3 Query: 303 ERGVAGGGEDQGRGNF---PSQEERMDRPSREG-HRRPDQHLLHRAGGVRGGERHQLRHG 470 ERG GGG QG NF P ++M P++ G + P + + GG G H+ G Sbjct: 2 ERGGYGGGSGQGYNNFAVPPPNYQQM--PNKTGNYNEPPPNYGKQGGGYDSGSGHRGSGG 59 Query: 471 GDVVRRV*EHRGAHGGAGPHLRRRGG 548 G GG G RGG Sbjct: 60 S----------GNGGGGGGSWNDRGG 75 Score = 28.9 bits (63), Expect = 10.0 Identities = 31/94 (32%), Positives = 35/94 (37%), Gaps = 6/94 (6%) Frame = +3 Query: 285 EGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREG--HRRPDQHLLHRAGGVRGG---- 446 +GD E G GGG G G + DR S G H R GG GG Sbjct: 302 KGDDEGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGGGY 361 Query: 447 ERHQLRHGGDVVRRV*EHRGAHGGAGPHLRRRGG 548 R +GG RG GG G + RR GG Sbjct: 362 SRFNDNNGGG--------RGGRGGGGGN-RRDGG 386
>CAC1B_RABIT (Q05152) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 31.6 bits (70), Expect = 1.5 Identities = 36/133 (27%), Positives = 44/133 (33%), Gaps = 25/133 (18%) Frame = +3 Query: 147 PQEQQAPAGHDSARRHQWQQQVLDSLLQCFFVSGRLRVQRRGVRPGEGDREPERG----- 311 P +AP G D RRH + + + R + GE ERG Sbjct: 837 PDGSEAPEGADPPRRHHRHRDKDKAPATVPSAGEQDRAEALRAEGGELGPREERGRPRRS 896 Query: 312 ----VAGGGE---DQGRGNFPSQEERMDR---PSREGHRRPDQHLLHRAG---------- 431 G E D+GRG P R R P R P +H HR G Sbjct: 897 RSKEAPGAPEVRSDRGRGPCPEGGRRHHRRGSPEEAAEREPRRHRAHRHGPDPGKEGPAS 956 Query: 432 GVRGGERHQLRHG 470 G RG R + R G Sbjct: 957 GTRGERRARHRTG 969
>AKIB1_MOUSE (Q6ZPS6) Ankyrin repeat and IBR domain-containing protein 1| (Fragment) Length = 1087 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/51 (41%), Positives = 23/51 (45%) Frame = +3 Query: 267 RGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLL 419 RGV P + P R AGG D F S E R R R+ RR D H L Sbjct: 733 RGVAPADSPDAPRRSFAGGTWDWEYLGFASPEYR--RRHRQQRRRGDVHSL 781
>G3BP_HUMAN (Q13283) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 466 Score = 31.2 bits (69), Expect = 2.0 Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 6/91 (6%) Frame = +3 Query: 192 HQWQQQVLDSLLQCFFVSGRLRVQRRGVRPGEG-----DREPERGVAGGGEDQGRGNFP- 353 H+ + L Q + LR+ G P G D EP + V RG Sbjct: 349 HEVDKSELKDFFQSYGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGEVRL 408 Query: 354 SQEERMDRPSREGHRRPDQHLLHRAGGVRGG 446 + EE+ R +REG RR ++ L GG RGG Sbjct: 409 NVEEKKTRAAREGDRRDNR--LRGPGGPRGG 437
>AKIB1_HUMAN (Q9P2G1) Ankyrin repeat and IBR domain-containing protein 1| (Fragment) Length = 1214 Score = 31.2 bits (69), Expect = 2.0 Identities = 21/54 (38%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = +3 Query: 267 RGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGH---RRPDQHLL 419 RGV P + P R AGG D F S EE + R H RR D H L Sbjct: 855 RGVAPADSPEAPRRSFAGGTWDWEYLGFASPEEYAEFQYRRRHRQRRRGDVHSL 908
>CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn))| (Cadherin-associated Src substrate) (CAS) (p120(cas)) Length = 968 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +3 Query: 243 SGRLRVQRRGVRPGEG-DREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLL 419 +G + R P +G R E G GG ++ G + ++ E RPS EG+R P + + Sbjct: 197 AGTATLPRNFHYPPDGYSRHYEDGYPGGSDNYGSLSRVTRIEERYRPSMEGYRAPSRQDV 256 Query: 420 HRAGGVRGGERHQLRHGGDVV 482 + G + Q+R GG V Sbjct: 257 Y-------GPQPQVRVGGSSV 270
>G3BP_MOUSE (P97855) Ras-GTPase-activating protein-binding protein 1 (EC| 3.6.1.-) (ATP-dependent DNA helicase VIII) (GAP SH3-domain-binding protein 1) (G3BP-1) (HDH-VIII) Length = 465 Score = 31.2 bits (69), Expect = 2.0 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 6/97 (6%) Frame = +3 Query: 192 HQWQQQVLDSLLQCFFVSGRLRVQRRGVRPGEG-----DREPERGVAGGGEDQGRGNFP- 353 H+ + L Q F LR+ G P G D EP + V RG Sbjct: 347 HEVDKSELKDFFQNFGNVVELRINSGGKLPNFGFVVFDDSEPVQKVLSNRPIMFRGAVRL 406 Query: 354 SQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQLR 464 + EE+ R +REG RR ++ L GG RGG +R Sbjct: 407 NVEEKKTRAAREGDRRDNR--LRGPGGPRGGPSGGMR 441
>FBRL_CANGA (Q6FN88) Fibrillarin| Length = 323 Score = 31.2 bits (69), Expect = 2.0 Identities = 34/99 (34%), Positives = 39/99 (39%), Gaps = 6/99 (6%) Frame = +3 Query: 246 GRLRVQRRGVRPGEGDREPERGVAGG-GEDQG--RGNFPSQEERMDRP---SREGHRRPD 407 G R R G R G G R RG GG G +G RG F + P SR G R Sbjct: 9 GGARGGRGGSRGGFGGRGGSRGGFGGRGGSRGGSRGGFGGRGGSRGGPRGGSRGGPR--- 65 Query: 408 QHLLHRAGGVRGGERHQLRHGGDVVRRV*EHRGAHGGAG 524 GG RGG R + G VV +H G + G Sbjct: 66 -------GGARGGARGGAKGGAKVVIEPHKHDGVYIARG 97
>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2424 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +3 Query: 246 GRLRVQRRGVRPGEGDRE-PERGVAGGGEDQGR---GNFPSQEERMDRPSRE-GHRR 401 GR R R R GEG+ E P+ G GGGE + R G P+ + R RE HRR Sbjct: 983 GRHREGSRPARSGEGEAEGPDGGGGGGGERRRRHRHGPPPAYDPDARRDDRERRHRR 1039
>ZBT10_RAT (Q9WTY8) Zinc finger and BTB domain-containing protein 10 (Zinc| finger protein RIN ZF) Length = 836 Score = 30.8 bits (68), Expect = 2.6 Identities = 33/122 (27%), Positives = 42/122 (34%), Gaps = 13/122 (10%) Frame = +3 Query: 141 RAPQEQQAPAGHDSARRHQWQQQ-------VLDSLLQCFFVSGR----LRVQRRGVRPGE 287 + P + P G R QWQQ V Q GR R GV G Sbjct: 57 KEPSDSGLPRGRRRGSRQQWQQSRPPGDLGVAPQAFQWARAGGRGSGAGRAGGEGVDAGR 116 Query: 288 GDREPERGVAGGGEDQGRGNFPSQEERMD--RPSREGHRRPDQHLLHRAGGVRGGERHQL 461 G PE GGG + GR + + +R R EG + GV GE + Sbjct: 117 G--VPELQHRGGGGEPGRWQWGGRRQRSSSRRSGGEGGEEAE------GSGVGAGEGETV 168 Query: 462 RH 467 +H Sbjct: 169 QH 170 Score = 30.8 bits (68), Expect = 2.6 Identities = 31/94 (32%), Positives = 38/94 (40%), Gaps = 2/94 (2%) Frame = +3 Query: 249 RLRVQRRGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRA 428 RL +RRG P G +EP + G +GR Q+ + RP + P RA Sbjct: 43 RLAGRRRGGPPASG-KEP----SDSGLPRGRRRGSRQQWQQSRPPGDLGVAPQAFQWARA 97 Query: 429 GGVRGGERHQLRHGGDVVRRV*E--HRGAHGGAG 524 GG G G D R V E HRG G G Sbjct: 98 GGRGSGAGRAGGEGVDAGRGVPELQHRGGGGEPG 131
>CTND1_MOUSE (P30999) Catenin delta-1 (p120 catenin) (p120(ctn))| (Cadherin-associated Src substrate) (CAS) (p120(cas)) Length = 911 Score = 30.8 bits (68), Expect = 2.6 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 1/81 (1%) Frame = +3 Query: 243 SGRLRVQRRGVRPGEG-DREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLL 419 +G + R P +G R E G GG ++ G + ++ E RPS EG+R P + + Sbjct: 197 AGTATLPRNFHYPPDGYGRHYEDGYPGGSDNYGSLSRVTRIEERYRPSMEGYRAPSRQDV 256 Query: 420 HRAGGVRGGERHQLRHGGDVV 482 + G + Q+R GG V Sbjct: 257 Y-------GPQPQVRVGGSSV 270
>HRP65_CHITE (Q9U1N0) Hrp65 protein (Ct-Hrp65)| Length = 535 Score = 30.4 bits (67), Expect = 3.4 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 2/111 (1%) Frame = +3 Query: 132 EQLRAPQE--QQAPAGHDSARRHQWQQQVLDSLLQCFFVSGRLRVQRRGVRPGEGDREPE 305 +Q+R Q+ Q D R + Q+ L +Q +S L Q + G G Sbjct: 386 QQMRRQQDDMQMRMQRQDEEMRRRQQENSL--FMQAQQLSNMLDQQEMNHQGGGGGG--- 440 Query: 306 RGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQ 458 G G G +QG G R R R + ++++ GG GG ++Q Sbjct: 441 -GNGGNGNNQGGGGNQGGGRRNYNNDRNNDRNQNFDMMNQGGGNHGGNQYQ 490
>AT2A3_HUMAN (Q93084) Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (EC| 3.6.3.8) (Calcium pump 3) (SERCA3) (SR Ca(2+)-ATPase 3) Length = 1043 Score = 30.4 bits (67), Expect = 3.4 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP L L +TLR+ S S S+ H+E+ D A+ + KN+L Sbjct: 155 VGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTEAIPDPRAVNQDKKNML 208
>AT2A2_RAT (P11507) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class Length = 1043 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2160 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +3 Query: 237 FVSGRLRVQRRGVRPGEGDREPERGVAGGGEDQGRG--NFPSQEERMDRPSREGHRRPDQ 410 F S R ++R+ RPG G + G + GG G G P + ++ PS + RP + Sbjct: 1388 FSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGAGPGGRTGPGRGDKRSWPSPKNRSRPPE 1447
>AT2A2_RABIT (P20647) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1042 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>AT2A2_PIG (P11607) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum class Length = 1042 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>AT2A2_HUMAN (P16615) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1042 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>AT2A2_MOUSE (O55143) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1044 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>AT2A2_FELCA (Q00779) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 997 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>AT2A2_CANFA (O46674) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 997 Score = 30.4 bits (67), Expect = 3.4 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L+S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRLTSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>AT2A1_RANES (Q92105) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 994 Score = 30.4 bits (67), Expect = 3.4 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + L S +TLR+ S S S+ H+E D A+ + KN+L Sbjct: 155 VGDKVPADIRLISIKSTTLRIDQSILTGESVSVIKHTEVVPDTRAVNQDKKNML 208
>TTLL4_HUMAN (Q14679) Tubulin--tyrosine ligase-like protein 4| Length = 1199 Score = 30.0 bits (66), Expect = 4.5 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 4/123 (3%) Frame = -1 Query: 521 SPPVSAAVFSDPSDDVPAVPELMALSATYTAGSME*MLVWPAVSFSTRPVHPFFLGGKVP 342 S P + FS P +P ++L+A SM + P S ST P G+ P Sbjct: 138 SSPSEKSPFSLPQKSLP-----VSLTANKATSSMVFSMAQPMASSSTEPYLCLAAAGENP 192 Query: 341 TTLVLSSASHSTLRLPISFSGAHSTSLHSES----SGDEEALQETVKNLLLPLMPPRGIV 174 + L+SA ++P S ++ L++ S + L +T + L P+ PP+ Sbjct: 193 SGKSLASAISG--KIPSPLSSSYKPMLNNNSFMWPNSTPVPLLQTTQG-LKPVSPPKIQP 249 Query: 173 ACW 165 W Sbjct: 250 VSW 252
>Y338_MYCGE (P47580) Hypothetical lipoprotein MG338 precursor| Length = 1271 Score = 30.0 bits (66), Expect = 4.5 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%) Frame = +1 Query: 127 SASSCVLLRSS--KPQQATIPRGGINGNSRFLTVSCNASSSPDDSECN 264 S+++ V+++S+ K Q+ T G N S FL ++ + SSS D+ N Sbjct: 381 SSATTVMMKSAMTKSQEVTSDNNGFNVKSEFLKINPSLSSSGSDNSSN 428
>FBLN2_MOUSE (P37889) Fibulin-2 precursor| Length = 1221 Score = 30.0 bits (66), Expect = 4.5 Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 9/85 (10%) Frame = +1 Query: 175 TIPRGGINGNSRFLTVSCNASSSP---DDSECNDV-ECAPEKEIGSLS-----VEWLAEE 327 ++PRG ++G+++ L +C A+ D+ EC ++ E + +I ++ + +L +E Sbjct: 418 SVPRGDLDGSTKDLIETCCAAGQQWAIDNDECQEIPENGAQSDICRIAQRQCCISYL-KE 476 Query: 328 RTKVVGTFPPKKKGWTGLVEKDTAG 402 ++ V G K+ G + DT G Sbjct: 477 KSCVAGVMGAKEGETCGAEDNDTCG 501
>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2157 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Frame = +3 Query: 237 FVSGRLRVQRRGVRPGEGDREPERGVAGGGEDQGRG--NFPSQEERMDRPSREGHRRPDQ 410 F S R ++R+ RPG G + G + GG G G P + ++ PS + RP + Sbjct: 1385 FSSQRPGMERQNRRPGPGGKAGSSGSSSGGGGGGPGGRTGPGRGDKRSWPSPKNRSRPPE 1444
>PEP_DROME (P41073) Zinc finger protein on ecdysone puffs| Length = 716 Score = 30.0 bits (66), Expect = 4.5 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = +3 Query: 270 GVRPGEGDREPERGVA--GGGEDQGRGNFPSQEERMDRPSREGHRRPD 407 G GEGD E E V G G+D G +QEE +EG + P+ Sbjct: 594 GEGEGEGDEEAEAEVEEDGAGQDNGEEEMEAQEEE----GQEGEQEPE 637
>CAC1B_HUMAN (Q00975) Voltage-dependent N-type calcium channel alpha-1B subunit| (Voltage-gated calcium channel alpha subunit Cav2.2) (Calcium channel, L type, alpha-1 polypeptide isoform 5) (Brain calcium channel III) (BIII) Length = 2339 Score = 30.0 bits (66), Expect = 4.5 Identities = 30/126 (23%), Positives = 41/126 (32%), Gaps = 18/126 (14%) Frame = +3 Query: 147 PQEQQAPAGHDSARRHQWQQQV--------LDSLLQCFFVSGRLRVQRRGVRPGEGDREP 302 P+ +AP G D RRH + D SG + RP + Sbjct: 836 PEAAEAPEGVDPPRRHHRHRDKDKTPAAGDQDRAEAPKAESGEPGAREERPRPHRSHSKE 895 Query: 303 ERGVAGGGEDQGRGNFPS---QEERMDRPSREGHRRPDQHLLHR-------AGGVRGGER 452 G ++GRG P + R P R P +H HR G +G R Sbjct: 896 AAGPPEARSERGRGPGPEGGRRHHRRGSPEEAAEREPRRHRAHRHQDPSKECAGAKGERR 955 Query: 453 HQLRHG 470 + R G Sbjct: 956 ARHRGG 961
>SET1A_HUMAN (O15047) Histone-lysine N-methyltransferase, H3 lysine-4 specific| SET1 (EC 2.1.1.43) (Set1/Ash2 histone methyltransferase complex subunit SET1) (SET-domain-containing protein 1A) Length = 1707 Score = 30.0 bits (66), Expect = 4.5 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 545 APAAKMRASPPVSAAVFSDPSDDVPAVPELMALSA 441 APA + P AA+FS P+D+V PE++ A Sbjct: 1312 APALRPPEPVPAPAALFSSPADEVLEAPEVVVAEA 1346
>K0853_HUMAN (Q5T200) Protein KIAA0853| Length = 1668 Score = 30.0 bits (66), Expect = 4.5 Identities = 30/100 (30%), Positives = 41/100 (41%) Frame = +3 Query: 108 PCPIHALCEQLRAPQEQQAPAGHDSARRHQWQQQVLDSLLQCFFVSGRLRVQRRGVRPGE 287 P P H+L +PQ +Q+P H S R + + + Q R RG R E Sbjct: 373 PYPSHSLS----SPQRKQSPPRHRSPMREKGRHD-HERTSQSHDRRHERREDTRGKRDRE 427 Query: 288 GDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPD 407 D ER +DQ S++ R DR R+G R D Sbjct: 428 KDSREEREYE---QDQS----SSRDHRDDREPRDGRDRRD 460
>EWS_MOUSE (Q61545) RNA-binding protein EWS| Length = 655 Score = 30.0 bits (66), Expect = 4.5 Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Frame = +3 Query: 267 RGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRR-----PDQHLLHRAG 431 RG R G DR G+ GG RG F MDR G RR P L+ + G Sbjct: 571 RGGRGGLMDRGGPGGMFRGGRGGDRGGFRG-GRGMDRGGFGGGRRGGPGGPPGPLMEQMG 629 Query: 432 GVRGG 446 G RGG Sbjct: 630 GRRGG 634
>EWS_HUMAN (Q01844) RNA-binding protein EWS (EWS oncogene) (Ewing sarcoma| breakpoint region 1 protein) Length = 656 Score = 30.0 bits (66), Expect = 4.5 Identities = 25/65 (38%), Positives = 28/65 (43%), Gaps = 5/65 (7%) Frame = +3 Query: 267 RGVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRR-----PDQHLLHRAG 431 RG R G DR G+ GG RG F MDR G RR P L+ + G Sbjct: 572 RGGRGGLMDRGGPGGMFRGGRGGDRGGFRG-GRGMDRGGFGGGRRGGPGGPPGPLMEQMG 630 Query: 432 GVRGG 446 G RGG Sbjct: 631 GRRGG 635
>RU17_MOUSE (Q62376) U1 small nuclear ribonucleoprotein 70 kDa (U1 SNRNP 70| kDa) (snRNP70) Length = 448 Score = 30.0 bits (66), Expect = 4.5 Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%) Frame = +3 Query: 249 RLRVQRRGVRPGEGDREPERGVAGGGEDQGRGNFPS--QEERMDRPSREGHRRPDQHLLH 422 R R +RG R E R+ RG G G+D G S ++ M+ +G+ P+ L Sbjct: 384 RDREHKRGERGSERGRDEARGGGGSGQDNGLEGLGSDGRDMYMEAEGGDGYMAPENGYLM 443 Query: 423 RA 428 A Sbjct: 444 EA 445
>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70| kDa) (snRNP70) (U1-70K) Length = 437 Score = 30.0 bits (66), Expect = 4.5 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Frame = +3 Query: 249 RLRVQRRGVRPGEGDREPERGVAGGGED---QGRGNFPSQEERMDRPSREGHRRPDQHLL 419 R R +RG R E R+ RG GGG+D +G GN S++ M+ +G+ P+ L Sbjct: 374 RDREHKRGERGSERGRDEARG-GGGGQDNGLEGLGN-DSRDMYMESEGGDGYLAPENGYL 431 Query: 420 HRA 428 A Sbjct: 432 MEA 434
>AT2A1_RABIT (P04191) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1001 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + + S +TLR+ S S S+ H+E D A+ + KN+L Sbjct: 155 VGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNML 208
>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 4/49 (8%) Frame = +3 Query: 270 GVRPGEGDREPE----RGVAGGGEDQGRGNFPSQEERMDRPSREGHRRP 404 G P G R P GG RG P R PSR GH P Sbjct: 132 GHLPSHGQRPPSPSHGHAPPSGGHTPPRGQHPPSHRRPSPPSRHGHPPP 180
>FBRL_CAEEL (Q22053) Fibrillarin| Length = 352 Score = 29.6 bits (65), Expect = 5.9 Identities = 33/91 (36%), Positives = 35/91 (38%), Gaps = 6/91 (6%) Frame = +3 Query: 270 GVRPGEG-DREPERGVAGGGEDQG-----RGNFPSQEERMDRPSREGHRRPDQHLLHRAG 431 G R G G DR RG GGG G RG+F + R R G R G Sbjct: 14 GFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDR---------G 64 Query: 432 GVRGGERHQLRHGGDVVRRV*EHRGAHGGAG 524 G RGG R GGD RG GG G Sbjct: 65 GFRGG-----RGGGD--------RGGFGGRG 82
>AT2A1_CHICK (P13585) Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 (EC| 3.6.3.8) (Calcium pump 1) (SERCA1) (SR Ca(2+)-ATPase 1) (Calcium-transporting ATPase sarcoplasmic reticulum type, fast twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 994 Score = 29.6 bits (65), Expect = 5.9 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + + S +TLR+ S S S+ H+E D A+ + KN+L Sbjct: 155 VGDKVPADIRIISIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNML 208
>AT2A2_CHICK (Q03669) Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 (EC| 3.6.3.8) (Calcium pump 2) (SERCA2) (SR Ca(2+)-ATPase 2) (Calcium-transporting ATPase sarcoplasmic reticulum type, slow twitch skeletal muscle isoform) (Endoplasmic reticulum cla Length = 1041 Score = 29.6 bits (65), Expect = 5.9 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP + ++S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 155 VGDKVPADIRITSIKSTTLRVDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 208
>PP1RA_HUMAN (Q96QC0) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 (Phosphatase 1 nuclear targeting subunit) (MHC class I region proline-rich protein CAT53) (FB19 protein) (PP1-binding protein of 114 kDa) (p99) Length = 940 Score = 29.6 bits (65), Expect = 5.9 Identities = 29/96 (30%), Positives = 35/96 (36%), Gaps = 2/96 (2%) Frame = +3 Query: 267 RGVRPGEGDREPE--RGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVR 440 RG R G P RG GGG G G+ P + + GHR + GG+ Sbjct: 723 RGARGGRSGGGPPNGRGGPGGGMVGGGGHRPHEGPGGGMGNSSGHRPHE----GPGGGMG 778 Query: 441 GGERHQLRHGGDVVRRV*EHRGAHGGAGPHLRRRGG 548 G R GG + G GG PH GG Sbjct: 779 SGHRPHEGPGGSM--------GGGGGHRPHEGPGGG 806
>IF2_PROAC (Q6A7M5) Translation initiation factor IF-2| Length = 964 Score = 29.6 bits (65), Expect = 5.9 Identities = 25/94 (26%), Positives = 34/94 (36%), Gaps = 3/94 (3%) Frame = +3 Query: 276 RPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPS---REGHRRPDQHLLHRAGGVRGG 446 +PG + P+ G G G PS RP R G RP + + G+ G Sbjct: 167 KPGAPSKSPKPGARPGPRPGGSAGLPSAARPGPRPGAGRRTGAPRPGNNPFASSQGM-GQ 225 Query: 447 ERHQLRHGGDVVRRV*EHRGAHGGAGPHLRRRGG 548 RH+ G G+ G G + R GG Sbjct: 226 SRHRSEGGQ-------RSGGSRSGQGERMPRPGG 252
>RL15_SYNPX (Q7U4I3) 50S ribosomal protein L15| Length = 152 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = -1 Query: 392 SFSTRPVHPFFLGGKVPTTLVLSSASHSTLRLPISFSGAHSTSLHSESSGDEEALQETVK 213 S S RP P F GG++P + H L P F+ + ++L+S G L VK Sbjct: 43 SRSGRPTRPGFEGGQMPLYRRVPKLKHFPLVNPKHFTVLNVSALNSLKDGSTVNLDSLVK 102 Query: 212 N 210 + Sbjct: 103 D 103
>WDR33_HUMAN (Q9C0J8) WD-repeat protein 33 (WD-repeat protein WDC146)| Length = 1336 Score = 29.3 bits (64), Expect = 7.7 Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%) Frame = +3 Query: 261 QRRGVRPGEGDREPERGVAGGGED-----QGRGNFPSQEERMDRPSREGHRRPDQHLLHR 425 +RR + G + PERG GG+D RG P + RP PD+ HR Sbjct: 972 ERRHEQSGGPEHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPD---DFHPDKRFGHR 1028 Query: 426 AGGVRGGERHQLRHGGDVVRRV*EHRGAHGGAGP 527 G GG + + E + GG GP Sbjct: 1029 LREFEG-------RGGPLPQ---EEKWRRGGPGP 1052
>SALA_DROME (P21750) Protein spalt-accessory precursor (Protein spalt-adjacent)| Length = 142 Score = 29.3 bits (64), Expect = 7.7 Identities = 26/94 (27%), Positives = 32/94 (34%), Gaps = 11/94 (11%) Frame = +3 Query: 282 GEGDREPERGVAGGGEDQGRGNFPSQ------EERMDRPSREGHRRPDQHLLHRAGGVRG 443 G+G + G+ GG G+G F Q + P GH H V Sbjct: 54 GQGGVGGQVGIGQGGVHPGQGGFAGQGSPNQYQPGYGSPVGSGH-------FHGTNPVES 106 Query: 444 GERHQ-----LRHGGDVVRRV*EHRGAHGGAGPH 530 G H+ H GD R EH G H G H Sbjct: 107 GHFHENPHEYPEHHGDHHREHHEHHGHHEHHGHH 140
>PSI1_SCHPO (Q09912) Protein psi1 (Protein psi)| Length = 379 Score = 29.3 bits (64), Expect = 7.7 Identities = 24/74 (32%), Positives = 28/74 (37%) Frame = +3 Query: 318 GGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQLRHGGDVVRRV*E 497 GGG G G ++ MD G R R GG+ GG + GG Sbjct: 136 GGGMGGGMGGMGGMDDDMDMDGGFGTRT-------RGGGMPGGFANMF--GG-------- 178 Query: 498 HRGAHGGAGPHLRR 539 GGAGPH RR Sbjct: 179 -----GGAGPHARR 187
>ATC_ARTSF (P35316) Calcium-transporting ATPase sarcoplasmic/endoplasmic| reticulum type (EC 3.6.3.8) (Calcium pump) Length = 1003 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G K+P L L S +TLR+ S S S+ H++ D A+ + KN+L Sbjct: 158 VGDKIPADLRLISILSTTLRIDQSILTGESVSVIKHTDPVPDPRAVNQDKKNML 211
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 29.3 bits (64), Expect = 7.7 Identities = 29/93 (31%), Positives = 32/93 (34%) Frame = +3 Query: 270 GVRPGEGDREPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGE 449 G RPG P R V G N P+ RP+ G RP R+GG RG Sbjct: 228 GGRPGSSAGGPPRPVPRPGPRPSPMNMPAS-----RPTPPGGARPSTS--SRSGGGRG-- 278 Query: 450 RHQLRHGGDVVRRV*EHRGAHGGAGPHLRRRGG 548 RG GGAGP GG Sbjct: 279 -----------------RGGGGGAGPRGGGAGG 294
>FIG2_YEAST (P25653) Factor-induced gene 2 precursor (Cell wall adhesin FIG2)| Length = 1609 Score = 29.3 bits (64), Expect = 7.7 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 11/111 (9%) Frame = -1 Query: 548 AAPAAKMRASPPVS-----------AAVFSDPSDDVPAVPELMALSATYTAGSME*MLVW 402 ++PA+ + SP VS A+ + VP +P ++SA+ + + Sbjct: 1240 SSPASTLAYSPSVSTSSSSSFSTTTASTLTSTHTSVPLLPSSSSISASSPSSTS------ 1293 Query: 401 PAVSFSTRPVHPFFLGGKVPTTLVLSSASHSTLRLPISFSGAHSTSLHSES 249 ST P F +PT +SS++ LP+S + S S S S Sbjct: 1294 ---LLSTSLPSPAFTSSTLPTATAVSSSTFIASSLPLSSKSSLSLSPVSSS 1341
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 29.3 bits (64), Expect = 7.7 Identities = 21/77 (27%), Positives = 32/77 (41%) Frame = +3 Query: 315 AGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQLRHGGDVVRRV* 494 AG + +G+ SQ+ + S + RR + + G R Q RHG R Sbjct: 1582 AGSKTSRRQGSSVSQDRDSEGHSEDSERRSESASRNHYGSAR----EQSRHGSRNPRSHQ 1637 Query: 495 EHRGAHGGAGPHLRRRG 545 E R +HG + R+ G Sbjct: 1638 EDRASHGHSAESSRQSG 1654 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 2/79 (2%) Frame = +3 Query: 315 AGGGEDQGRGNFPSQEERMDRPS-REGHRRPDQHLLHRAG-GVRGGERHQLRHGGDVVRR 488 AG G+ +G Q + + S EGH + A RG + Q RHG R Sbjct: 928 AGQGQSEGSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASRNHRGSAQEQSRHGSRHPRS 987 Query: 489 V*EHRGAHGGAGPHLRRRG 545 E R HG + R+ G Sbjct: 988 HHEDRAGHGHSADSSRQSG 1006
>MANA_RHOMR (P49425) Mannan endo-1,4-beta-mannosidase (EC 3.2.1.78)| (Endo-(1,4)-beta-mannanase) Length = 1021 Score = 29.3 bits (64), Expect = 7.7 Identities = 32/128 (25%), Positives = 43/128 (33%), Gaps = 12/128 (9%) Frame = +3 Query: 144 APQEQQAPAGHDS-------ARRHQWQQQVLDSLLQCFFVSGRLRVQRRGVRPGEGDREP 302 AP QQA GH+ A+ Q Q V+D R+ P E + Sbjct: 101 APHGQQAKTGHEGLGHEHAQAQHQQGQSNVVD---------------RQDGEPVEAQHQK 145 Query: 303 ERGVAGGGEDQGRGNFP-----SQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQLRH 467 + G GR +Q ++ + R G RR + V GG RH Sbjct: 146 DGAQRAGNAPAGRVELEQQPVEAQHQQQEGDVRIGKRRQNAFAPPALDHVHGGPGRLQRH 205 Query: 468 GGDVVRRV 491 G V R V Sbjct: 206 GLAVERHV 213
>ERME_SACER (P07287) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) (NMT) Length = 370 Score = 29.3 bits (64), Expect = 7.7 Identities = 30/93 (32%), Positives = 35/93 (37%), Gaps = 9/93 (9%) Frame = +3 Query: 297 EPERGVAGGGEDQGRGNFPSQEERMDRPSREGH--RRPDQHLLHRAGG-----VRGGERH 455 +P+RG GG D G Q+ R H R+ H R+ G R GER Sbjct: 282 QPQRGRRTGGRDHGDRRTGGQDRGDRRTGGRDHRDRQASGHGDRRSSGRNRDDGRTGERE 341 Query: 456 QLRHGGDVVRRV*EHRGAHGG--AGPHLRRRGG 548 Q GG RG GG G RRGG Sbjct: 342 QGDQGG--------RRGPSGGGRTGGRPGRRGG 366
>ADCY5_CANFA (P30803) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase| type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5) (Ca(2+)-inhibitable adenylyl cyclase) Length = 1265 Score = 29.3 bits (64), Expect = 7.7 Identities = 40/151 (26%), Positives = 51/151 (33%), Gaps = 38/151 (25%) Frame = +3 Query: 114 PIHALCEQLRAPQEQQAPAGHDSARRHQWQQQVL--------------------DSLLQC 233 P A+ QL+ Q+QQ ++H+ QQ V D L Sbjct: 50 PGGAVTPQLQQQQQQQQHEQQHEQQQHEQQQHVQQQQRLAKRWRGDDDPPLGGDDPLAGG 109 Query: 234 FFVSGRLRV---QRRGVRPGEGDREPERGVAGGGEDQ----GRGNFP-----------SQ 359 F S R R +R G G G R RG AGGG + G G P S Sbjct: 110 FGFSFRSRSAWQERGGDDCGRGSRRRRRGAAGGGSSRAPPAGGGGGPAAAGGAEVRPRSV 169 Query: 360 EERMDRPSREGHRRPDQHLLHRAGGVRGGER 452 E +D G P+ G GG+R Sbjct: 170 ELGLDERRGRGRAEPEP---EAEAGAPGGDR 197
>U2AF1_DROME (Q94535) Splicing factor U2af 38 kDa subunit (U2 auxiliary factor| 38 kDa subunit) (U2 snRNP auxiliary factor small subunit) Length = 264 Score = 29.3 bits (64), Expect = 7.7 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%) Frame = +3 Query: 225 LQCFFVSGRLRVQRRGVRPGEG------DREPERGVAGGGEDQGRGNFPSQEERMDRPSR 386 L+ + S R R + R PG R P R G G+ G GN+ + E R + Sbjct: 183 LRRYLYSRRRRARSRSRSPGRRRGSRSRSRSPGRRGGGRGDGVGGGNYLNNERDNMRGND 242 Query: 387 EGHRRPDQHLLHRAGGVRGGERH 455 G+ R D+ GG GG R+ Sbjct: 243 RGNDR-DRRKGGGGGGGGGGGRY 264
>AT2A3_MOUSE (Q64518) Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (EC| 3.6.3.8) (Calcium pump 3) (SERCA3) (SR Ca(2+)-ATPase 3) Length = 1038 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP L L +TLR+ S S S+ H+++ D A+ + KN+L Sbjct: 155 VGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTDAIPDPRAVNQDKKNML 208
>AT2A3_RAT (P18596) Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 (EC| 3.6.3.8) (Calcium pump 3) (SERCA3) (SR Ca(2+)-ATPase 3) Length = 999 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%) Frame = -1 Query: 359 LGGKVPTTLVLSSASHSTLRLPISFSGAHSTSL--HSESSGDEEALQETVKNLL 204 +G KVP L L +TLR+ S S S+ H+++ D A+ + KN+L Sbjct: 155 VGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTKHTDAIPDPRAVNQDKKNML 208
>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit| 10 Length = 819 Score = 28.9 bits (63), Expect = 10.0 Identities = 25/72 (34%), Positives = 26/72 (36%), Gaps = 1/72 (1%) Frame = +3 Query: 276 RPGEGDREPERGVAGGGEDQGRG-NFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGER 452 R G G RG GGE G N P D EGHR H HR G Sbjct: 727 RGGRGGEPGYRGRGRGGERGHPGRNGPYGMGHGDHRGHEGHRGHGGHGDHRGHG------ 780 Query: 453 HQLRHGGDVVRR 488 HGGD+ R Sbjct: 781 ----HGGDMSTR 788
>IF2_CORGL (Q8NP40) Translation initiation factor IF-2| Length = 1004 Score = 28.9 bits (63), Expect = 10.0 Identities = 36/121 (29%), Positives = 43/121 (35%), Gaps = 26/121 (21%) Frame = +3 Query: 261 QRRGVRPGEGDREPERGVAG-------------------GGEDQGRGNFPSQEERMDRPS 383 QR G R G+G+R +R AG GG QG PSQE Sbjct: 252 QRDGQRDGQGNRGGQRQGAGAGGPRPQGGPRPQGGSRPQGGSAQGAQGAPSQER------ 305 Query: 384 REGHRRPDQHLLHRAGGV-------RGGERHQLRHGGDVVRRV*EHRGAHGGAGPHLRRR 542 + G RRP ++ G +GG Q GG G GGAG RR Sbjct: 306 QGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQA--GGGAGGGFNRGGGTGGGAGRGGRRG 363 Query: 543 G 545 G Sbjct: 364 G 364
>AMOL2_HUMAN (Q9Y2J4) Angiomotin-like protein 2 (Leman coiled-coil protein)| (LCCP) Length = 779 Score = 28.9 bits (63), Expect = 10.0 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 9/57 (15%) Frame = +3 Query: 261 QRRGVRPGEGDREPERGVAGGGEDQG-------RGNFPSQEERMDRPS--REGHRRP 404 Q+ G RP GDR+P RG GG Q G+ S ER+ + S R G R P Sbjct: 120 QQAGTRPHAGDRDP-RGAPGGSRRQDEALRELRHGHVRSLSERLLQLSLERNGARAP 175
>SC6A8_TORMA (Q91502) Creatine transporter| Length = 611 Score = 28.9 bits (63), Expect = 10.0 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 3/44 (6%) Frame = +3 Query: 111 CPIHALCEQLRAPQEQQ---APAGHDSARRHQWQQQVLDSLLQC 233 CP H LC+++RAP+ Q PAG + R W +Q +D ++ C Sbjct: 9 CPGH-LCKEMRAPRRAQPPDVPAG-EPGSRVTWSRQ-MDFIMSC 49
>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated transcript| 2) Length = 2158 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%) Frame = +3 Query: 237 FVSGRLRVQRRGVRPGEGDREPERGVAGGGEDQGRG--NFPSQEERMDRPSREGHRRPDQ 410 F S R + R+ RPG G + G + GG G G P + ++ PS + RP + Sbjct: 1381 FSSQRPGMDRQNRRPGTGGKTGSGGGSSGGGGAGPGGRTGPGRGDKRSWPSPKNRSRPPE 1440
>UBE3C_HUMAN (Q15386) Ubiquitin-protein ligase E3C (EC 6.3.2.-)| Length = 1083 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/63 (28%), Positives = 31/63 (49%) Frame = +1 Query: 217 TVSCNASSSPDDSECNDVECAPEKEIGSLSVEWLAEERTKVVGTFPPKKKGWTGLVEKDT 396 + SC+ S+S + E + + E G LSV ++ EE K + T + LV +D+ Sbjct: 358 SASCHDSASDSEEESEEADKPSSPEDGRLSVSYITEECLKKLDT-KQQTNTLLNLVWRDS 416 Query: 397 AGQ 405 A + Sbjct: 417 ASE 419
>RS3_STRAW (Q82DN9) 30S ribosomal protein S3| Length = 275 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%) Frame = +3 Query: 264 RRGVRPGEGDRE-PERGVAGGGEDQGRGNFPSQEERMDRPSRE 389 R G RP G + P RG GGE GRG P Q + P E Sbjct: 220 RAGNRPARGGADRPARG-GRGGERGGRGRKPQQAPAAEAPKAE 261
>FBRL2_ARATH (Q94AH9) Fibrillarin-2 (Fibrillarin-like protein)| Length = 320 Score = 28.9 bits (63), Expect = 10.0 Identities = 31/85 (36%), Positives = 32/85 (37%) Frame = +3 Query: 294 REPERGVAGGGEDQGRGNFPSQEERMDRPSREGHRRPDQHLLHRAGGVRGGERHQLRHGG 473 R P G +GGG GRG R G R R GG RGG R GG Sbjct: 2 RPPLTG-SGGGFSGGRG----------RGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGG 50 Query: 474 DVVRRV*EHRGAHGGAGPHLRRRGG 548 R GA GG GP RGG Sbjct: 51 RGRGRGPPRGGARGGRGP--AGRGG 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,015,889 Number of Sequences: 219361 Number of extensions: 1271532 Number of successful extensions: 5652 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 5240 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5616 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
