ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14d08 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1096 bits (553), Expect = 0.0 Identities = 586/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 120050 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 119993 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119992 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 119933 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119932 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 119873 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119872 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 119813 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119812 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 119753 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119752 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 119693 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119692 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 119633 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119632 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 119573 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119572 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119514 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119513 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 119463 Score = 1096 bits (553), Expect = 0.0 Identities = 586/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 94844 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 94901 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94902 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 94961 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94962 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95021 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95022 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 95081 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95082 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 95141 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95142 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 95201 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95202 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 95261 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95262 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 95321 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95322 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95380 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95381 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 95431
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 961 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 904 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 903 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 844 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 784 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 724 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 664 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 663 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 604 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 544 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 543 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 484 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 483 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 425 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 424 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 374
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 44875 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 44818 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 44817 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 44758 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44757 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 44698 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44697 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 44638 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44637 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 44578 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 44577 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 44518 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 44458 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44457 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 44398 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44397 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 44339 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 44338 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 44288 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 20243 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 20300 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20301 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 20360 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20361 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 20420 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20421 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 20480 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20481 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 20540 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 20541 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 20600 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20601 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 20660 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20661 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 20720 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 20721 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 20779 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 20780 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 20830
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 1504 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 1447 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1446 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 1387 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1386 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 1327 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1326 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1267 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1266 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 1207 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1206 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 1147 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1146 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 1087 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1086 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 1027 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1026 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 968 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 967 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 917
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 123714 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 123657 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123656 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123597 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123596 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123537 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123536 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123477 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123476 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 123417 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123416 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 123357 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123356 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 123297 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 123237 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123236 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 123178 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123177 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 123127 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 99123 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 99180 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99181 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99240 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99241 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99300 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99301 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 99360 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99361 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 99420 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99421 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 99480 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99481 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 99540 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99541 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 99600 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99601 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 99659 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99660 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 99710
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 124431 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 124374 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 124373 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 124314 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124313 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 124254 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124253 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 124194 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124193 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 124134 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 124133 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 124074 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124073 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 124014 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124013 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 123954 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123953 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 123895 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123894 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 123844 Score = 1088 bits (549), Expect = 0.0 Identities = 585/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 99800 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 99857 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99858 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99917 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99918 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99977 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99978 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 100037 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100038 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 100097 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 100098 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 100157 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100158 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 100217 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100218 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 100277 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 100278 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 100336 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 100337 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 100387
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 118831 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 118774 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118773 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 118714 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118713 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 118654 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118653 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 118594 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118593 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 118534 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118533 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 118474 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118473 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 118414 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118413 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 118354 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 118353 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 118295 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 118294 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 118244
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 119858 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119857 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 119798 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119797 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 119738 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119737 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 119678 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 119618 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119617 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 119558 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119557 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 119498 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 119438 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119437 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119379 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119378 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 119328 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 95298 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95299 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 95358 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95359 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95418 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95419 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 95478 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95479 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 95538 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95539 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 95598 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95599 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 95658 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95659 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 95718 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95719 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95777 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95778 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 95828
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 119915 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 119858 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119857 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 119798 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119797 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 119738 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119737 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 119678 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 119618 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119617 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 119558 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119557 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 119498 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 119438 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119437 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119379 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119378 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 119328 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 95241 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 95298 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95299 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 95358 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95359 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95418 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95419 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 95478 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95479 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 95538 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95539 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 95598 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95599 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 95658 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95659 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 95718 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95719 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95777 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95778 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 95828
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 119864 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 119807 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119806 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 119747 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119746 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 119687 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119686 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 119627 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119626 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 119567 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119566 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 119507 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119506 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 119447 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119446 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 119387 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119386 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119328 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119327 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 119277 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 95186 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 95243 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95244 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 95303 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95304 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95363 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95364 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 95423 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95424 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 95483 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95484 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 95543 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95544 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 95603 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95604 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 95663 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95664 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95722 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95723 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 95773
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 31507819 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 31507876 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 31507877 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 31507936 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507937 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 31507996 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507997 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 31508056 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508057 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 31508116 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 31508117 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 31508176 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508177 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 31508236 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508237 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 31508296 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31508297 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 31508355 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31508356 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 31508406
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 84777 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 84720 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 84719 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 84660 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84659 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 84600 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84599 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 84540 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84539 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 84480 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 84479 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 84420 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84419 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 84360 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84359 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 84300 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 84299 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 84241 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 84240 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 84190
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 119884 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 119827 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119826 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 119767 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119766 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 119707 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119706 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 119647 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119646 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 119587 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119586 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 119527 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119526 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 119467 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119466 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 119407 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119406 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119348 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119347 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 119297 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 95234 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 95291 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95292 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 95351 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95352 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95411 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95412 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 95471 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95472 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 95531 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95532 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 95591 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95592 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 95651 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95652 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 95711 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95712 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95770 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95771 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 95821
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 122283 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 122340 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122341 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 122400 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122401 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 122460 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122461 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 122520 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122521 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 122580 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 122581 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 122640 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122641 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 122700 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122701 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 122760 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 122761 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 122819 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 122820 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 122870 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 14008 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 14065 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14066 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 14125 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14126 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 14185 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14186 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 14245 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14246 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 14305 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 14306 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 14365 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 14366 cccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggc 14425 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14426 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 14485 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14486 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 14544 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 14545 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 14595
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 58603 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 58546 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 58545 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 58486 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58485 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 58426 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58425 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 58366 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58365 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 58306 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 58305 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 58246 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58245 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 58186 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58185 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 58126 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 58125 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 58067 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58066 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 58016
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 9268168 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 9268225 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9268226 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 9268285 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268286 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 9268345 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268346 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 9268405 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268406 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 9268465 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9268466 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 9268525 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268526 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 9268585 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268586 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 9268645 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9268646 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9268704 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9268705 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 9268755 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 9227668 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 9227725 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9227726 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 9227785 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227786 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 9227845 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227846 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 9227905 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227906 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 9227965 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9227966 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 9228025 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228026 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 9228085 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228086 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 9228145 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9228146 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9228204 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9228205 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 9228255 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 9164257 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 9164314 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9164315 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 9164374 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164375 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 9164434 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164435 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 9164494 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164495 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 9164554 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9164555 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 9164614 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164615 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 9164674 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164675 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 9164734 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9164735 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9164793 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9164794 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 9164844 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 9056082 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 9056139 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9056140 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 9056199 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056200 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 9056259 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056260 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 9056319 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056320 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 9056379 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9056380 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 9056439 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 9056440 cccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggc 9056499 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056500 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 9056559 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9056560 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9056618 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 9056619 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 9056669 Score = 163 bits (82), Expect = 8e-37 Identities = 100/106 (94%) Strand = Plus / Minus Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 502 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 503 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 548 |||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggg 25171408
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 19938153 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 19938210 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 19938211 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 19938270 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938271 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 19938330 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938331 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 19938390 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938391 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 19938450 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 19938451 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 19938510 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938511 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 19938570 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938571 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 19938630 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19938631 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 19938689 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19938690 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 19938740 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 10277278 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 10277221 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10277220 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 10277161 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277160 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 10277101 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277100 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 10277041 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277040 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 10276981 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10276980 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 10276921 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276920 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 10276861 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276860 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 10276801 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10276800 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10276742 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10276741 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 10276691 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 10387020 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 10387077 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10387078 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 10387137 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 10387197 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 10387257 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 10387317 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10387318 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 10387377 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 10387437 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10387438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccc 10387497 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10387498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10387556 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10387557 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 10387607 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 461 agtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 286 ttgtgctgctaggcgaagcggttgagtgc 314 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 31598335 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 31598392 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 31598393 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 31598452 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598453 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 31598512 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598513 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 31598572 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598573 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 31598632 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 31598633 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 31598692 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598693 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 31598752 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598753 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 31598812 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 31598813 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 31598871 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 31598872 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 31598922
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 33525651 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 33525708 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 33525709 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 33525768 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525769 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 33525828 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525829 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 33525888 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525889 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 33525948 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 33525949 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 33526008 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526009 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 33526068 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526069 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 33526128 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 33526129 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 33526187 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 33526188 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 33526238 Score = 226 bits (114), Expect = 7e-56 Identities = 134/138 (97%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 465 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 524 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 525 tgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaat 584 ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtggga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaat 16677984 Query: 585 gagccggcgactcatagg 602 |||||||||||||||||| Sbjct: 16677983 gagccggcgactcatagg 16677966 Score = 167 bits (84), Expect = 5e-38 Identities = 107/112 (95%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 479 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 538 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 539 gtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccg 590 |||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 32744712 gtggga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 472 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 510 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 43 agggcgtagcaagcgacgaaatgcttc 69 ||||| ||||||||||||||||||||| Sbjct: 19455170 agggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 47890 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 47833 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 47832 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 47773 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47772 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 47713 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47712 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 47653 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47652 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 47593 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 47592 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 47533 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47532 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 47473 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47472 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 47413 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 47412 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 47354 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47353 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 47303
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 70848 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 70905 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 70906 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 70965 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70966 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 71025 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71026 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 71085 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71086 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 71145 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 71146 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 71205 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71206 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 71265 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71266 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 71325 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71326 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 71384 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 71385 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 71435 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 77 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 137 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 258 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 317 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 318 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 377 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 498 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 556 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 557 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 607
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 17 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 74 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 134 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 194 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 195 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 254 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 314 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 315 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 374 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 434 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 494 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 495 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 553 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 554 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 604
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 19949429 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 19949486 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 19949487 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 19949546 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949547 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 19949606 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949607 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 19949666 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949667 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 19949726 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 19949727 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 19949786 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949787 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 19949846 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949847 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 19949906 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 19949907 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 19949965 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19949966 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 19950016 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 10283317 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 10283260 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10283259 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 10283200 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283199 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 10283140 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283139 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 10283080 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283079 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 10283020 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10283019 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 10282960 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282959 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 10282900 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282899 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 10282840 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10282839 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10282781 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10282780 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 10282730 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 10393059 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 10393116 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10393117 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 10393176 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393177 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 10393236 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393237 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 10393296 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393297 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 10393356 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 10393357 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 10393416 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393417 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 10393476 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 10393477 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccc 10393536 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10393537 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 10393595 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 10393596 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 10393646 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 286 ttgtgctgctaggcgaagcggttgagtgc 314 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 119858 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 119801 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119800 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 119741 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119740 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 119681 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119680 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 119621 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119620 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 119561 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 119560 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 119501 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119500 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 119441 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119440 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 119381 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 119380 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 119322 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119321 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 119271 Score = 1080 bits (545), Expect = 0.0 Identities = 584/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 95181 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 95238 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95239 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 95298 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95299 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95358 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95359 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 95418 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95419 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 95478 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 95479 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 95538 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95539 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 95598 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95599 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 95658 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 95659 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 95717 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 95718 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 95768
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 140816 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 140873 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 140874 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 140933 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140934 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 140993 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140994 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 141053 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141054 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 141113 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 141114 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 141173 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 141174 cccgagtagcatggggcacgtggaatcctgtgtgaatcagcaaggaccaccttgcaaggc 141233 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141234 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 141293 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141294 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 141352 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141353 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 141403
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 93412 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 93469 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 93470 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 93529 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93530 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 93589 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93590 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 93649 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93650 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 93709 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 93710 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 93769 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93770 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 93829 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 93830 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccc 93889 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 93890 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 93948 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 93949 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 93999
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1072 bits (541), Expect = 0.0 Identities = 583/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 27476 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 27533 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27534 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 27593 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27594 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 27653 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27654 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 27713 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27714 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 27773 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 27774 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 27833 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27834 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 27893 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 27894 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgagaagaaccc 27953 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27954 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 28012 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 28013 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 28063
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1065 bits (537), Expect = 0.0 Identities = 582/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 9242113 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 9242056 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9242055 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 9241996 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241995 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 9241936 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9241935 ggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaac 9241876 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241875 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 9241816 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9241815 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 9241756 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241755 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 9241696 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241695 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 9241636 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9241635 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 9241577 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 9241576 aagtgatctctga-ccgcgtgcctgttgaagaatgagctggcgactcatagg 9241526 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 168 actgaaacatcttagtagccagaggaaaagaaag 201 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1065 bits (537), Expect = 0.0 Identities = 582/592 (98%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 53326 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 53269 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 53268 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 53209 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53208 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 53149 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 53148 ggaaaagaaagcaaaagcgattcccgtagtagcagcgagcgaaatgggagcagcctaaac 53089 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53088 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 53029 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 53028 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 52969 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52968 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 52909 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52908 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 52849 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 52848 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 52790 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 52789 aagtgatctctga-ccgcgtgcctgttgaagaatgagctggcgactcatagg 52739
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1049 bits (529), Expect = 0.0 Identities = 555/561 (98%), Gaps = 2/561 (0%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 65 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 66 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 125 Query: 162 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 185 Query: 222 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 281 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 186 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagtaca 245 Query: 282 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 305 Query: 342 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 401 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 306 gccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcccgt 365 Query: 402 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 425 Query: 462 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 426 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 485 Query: 522 tgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaag 581 ||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||| Sbjct: 486 tgctgagctcccaagcagtggga-ggggaaattgatctctga-ccgcgtgcctgttgaag 543 Query: 582 aatgagccggcgactcatagg 602 ||||||||||||||||||||| Sbjct: 544 aatgagccggcgactcatagg 564
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1035 bits (522), Expect = 0.0 Identities = 578/592 (97%), Gaps = 4/592 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||| Sbjct: 123654 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 123596 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123595 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123536 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123535 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123476 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123475 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123416 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123415 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 123356 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 123355 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 123297 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123296 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 123237 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123236 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 123177 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 123176 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 123118 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 123117 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 123067 Score = 1035 bits (522), Expect = 0.0 Identities = 578/592 (97%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||| Sbjct: 99083 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 99141 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 99142 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 99201 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99202 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 99261 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99262 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 99321 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99322 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 99381 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 99382 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 99440 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99441 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 99500 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99501 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 99560 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 99561 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 99619 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 99620 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 99670
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1035 bits (522), Expect = 0.0 Identities = 578/592 (97%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||| Sbjct: 5436 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 5494 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 5495 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 5554 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5555 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 5614 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5615 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 5674 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5675 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 5734 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 5735 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 5793 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5794 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 5853 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5854 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 5913 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5914 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 5972 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5973 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 6023
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1035 bits (522), Expect = 0.0 Identities = 578/592 (97%), Gaps = 4/592 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| | |||||||||||||||||||||||||| Sbjct: 24 ggtggatacctaggcacccagag-acgaggaagaggcgtagcaagcgacgaaatgcttcg 82 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 83 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 142 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 tgccgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 202 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 262 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 263 cgtgaaaacggggttgtgggtgagcaatacaagcgttgtgctgctaggcgaagcggttga 322 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||| Sbjct: 323 gtgccgcaccctagatggctatagtccagtagccgatagcatcact-gcttacgctctga 381 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 441 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 442 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 501 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 502 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-gggga 560 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 561 aagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 611
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 975 bits (492), Expect = 0.0 Identities = 512/516 (99%), Gaps = 2/516 (0%) Strand = Plus / Plus Query: 87 catagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 146 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 catagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 60 Query: 147 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 120 Query: 207 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 180 Query: 267 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 240 Query: 327 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 386 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 241 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 300 Query: 387 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 360 Query: 447 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaa 420 Query: 507 tagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgaccc 566 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 421 tagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-cc 478 Query: 567 gcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||| Sbjct: 479 gcgtgcctgttgaagaatgagccggcgactcatagg 514
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 959 bits (484), Expect = 0.0 Identities = 507/512 (99%), Gaps = 2/512 (0%) Strand = Plus / Plus Query: 91 gatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggc 150 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1 gatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggc 60 Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 120 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggg 180 Query: 271 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggct 240 Query: 331 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 390 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 241 aaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcacg 300 Query: 391 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 360 Query: 451 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 420 Query: 511 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgt 570 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 421 acgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgt 478 Query: 571 gcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| Sbjct: 479 gcctgttgaagaatgagccggcgactcatagg 510
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 926 bits (467), Expect = 0.0 Identities = 492/498 (98%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 21 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 78 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 79 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 138 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 198 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 258 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 318 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 319 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctga 378 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 438 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 498 Query: 491 ccagtgggtagtgaaata 508 |||||||||||||||||| Sbjct: 499 ccagtgggtagtgaaata 516
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 910 bits (459), Expect = 0.0 Identities = 564/592 (95%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 139564 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 139507 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139506 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 139448 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139447 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 139388 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139387 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 139328 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 139327 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 139268 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||| Sbjct: 139267 gtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctga 139208 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139207 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139148 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139147 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 139088 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 139087 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 139032 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139031 atttgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 138981 Score = 910 bits (459), Expect = 0.0 Identities = 564/592 (95%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 110381 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 110438 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 110439 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 110497 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110498 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 110557 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110558 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 110617 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 110618 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 110677 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||||||||||| | |||||||||||||||||||||||| ||||| ||||||| Sbjct: 110678 gtactgcaccctagatggcgagagtccagtagccgaaagcatcactggcttacgctctga 110737 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110738 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110797 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110798 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 110857 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 110858 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 110913 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110914 atttgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 110964
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 910 bits (459), Expect = 0.0 Identities = 476/479 (99%), Gaps = 2/479 (0%) Strand = Plus / Plus Query: 124 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 184 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 244 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 304 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 363 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 364 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 424 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 484 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 544 agggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 421 a-ggggaaagtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 477
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 910 bits (459), Expect = 0.0 Identities = 564/592 (95%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 127842 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 127785 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 127784 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 127726 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127725 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 127666 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 127665 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 127606 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 127605 cgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgga 127546 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||||| Sbjct: 127545 gtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctga 127486 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127485 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 127426 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127425 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 127366 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 127365 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 127310 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 127309 atgtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 127259 Score = 910 bits (459), Expect = 0.0 Identities = 564/592 (95%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 107080 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 107137 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 107138 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 107196 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107197 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 107256 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107257 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 107316 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 107317 cgtgaaaacggggttgtgggagagcaatacaagcgtcatgctgctaggcgaagcggtgga 107376 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||| ||||||||||||| ||||||| Sbjct: 107377 gtgctgcaccctagatggcgagagtccagtagccgaaaacatcactagcttacgctctga 107436 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107437 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 107496 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107497 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 107556 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 107557 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 107612 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107613 atgtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 107663
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 910 bits (459), Expect = 0.0 Identities = 564/592 (95%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 134201 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 134144 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 134143 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 134085 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134084 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 134025 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134024 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 133965 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 133964 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 133905 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 133904 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 133845 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133844 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 133785 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133784 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 133725 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || || Sbjct: 133724 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggaga 133669 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133668 atgtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 133618 Score = 910 bits (459), Expect = 0.0 Identities = 564/592 (95%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 103770 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 103827 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 103828 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 103886 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103887 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 103946 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103947 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104006 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104007 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 104066 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 104067 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 104126 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104127 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104186 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104187 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 104246 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || || Sbjct: 104247 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggaga 104302 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104303 atgtgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 104353
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 894 bits (451), Expect = 0.0 Identities = 562/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 142086 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 142029 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct: 142028 gggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc- 141970 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141969 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 141910 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141909 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 141850 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 141849 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttga 141790 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||||| Sbjct: 141789 gtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctga 141730 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 141729 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 141670 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141669 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 141610 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 141609 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 141554 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141553 atttgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 141503 Score = 894 bits (451), Expect = 0.0 Identities = 562/592 (94%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 111571 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 111628 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| Sbjct: 111629 gggagttgaaaataagcatagatccggagattcccgaatgggtcaacctttcgaactgc- 111687 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111688 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 111747 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111748 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 111807 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 111808 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggttga 111867 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||||||||||| | ||||||||| |||||||||||||| ||||| ||||||| Sbjct: 111868 gtactgcaccctagatggcgagagtccagtaaccgaaagcatcactggcttacgctctga 111927 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 111928 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 111987 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111988 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 112047 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||| || || Sbjct: 112048 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtggga-ggaga 112103 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112104 atttgatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 112154
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 886 bits (447), Expect = 0.0 Identities = 560/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 134959 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 134902 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 134901 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 134843 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134842 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 134783 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134782 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 134723 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 134722 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 134663 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| | Sbjct: 134662 gtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaa 134603 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134602 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 134543 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134542 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 134483 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 134482 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg---- 134430 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134429 -agaaatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 134380 Score = 886 bits (447), Expect = 0.0 Identities = 560/592 (94%), Gaps = 12/592 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 105323 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 105380 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 105381 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 105439 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105440 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105499 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105500 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105559 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 105560 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 105619 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||| | Sbjct: 105620 gtgctgcaccctagatggctagagtccagtagccgaaagcatcactagcttacgttctaa 105679 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105680 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105739 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105740 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 105799 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105800 ccatcggggagtgaaatagaacatgaaaccg---tgagctcccaagcagtgggagg---- 105852 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105853 -agaaatctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 105902
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 882 bits (445), Expect = 0.0 Identities = 560/592 (94%), Gaps = 10/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 136569 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 136512 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 136511 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc- 136453 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136452 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136393 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136392 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136333 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 136332 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 136273 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 136272 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 136213 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136212 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 136153 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136152 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 136093 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136092 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 136036 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136035 a---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135988 Score = 882 bits (445), Expect = 0.0 Identities = 560/592 (94%), Gaps = 10/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 105856 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 105913 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 105914 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcaaactgc- 105972 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105973 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106032 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106033 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106092 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 106093 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 106152 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 106153 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 106212 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106213 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106272 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 106273 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 106332 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106333 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 106389 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106390 a---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106437
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 872 bits (440), Expect = 0.0 Identities = 559/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 132753 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 132696 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 132695 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 132637 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132636 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 132577 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132576 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 132517 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132516 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 132457 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132456 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 132397 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132396 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 132337 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132336 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 132277 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132276 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 132220 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132219 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 132171 Score = 872 bits (440), Expect = 0.0 Identities = 559/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 104125 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 104182 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 104183 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 104241 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104242 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 104301 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104302 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104361 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104362 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 104421 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104422 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 104481 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104482 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104541 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104542 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 104601 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104602 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 104658 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104659 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 104707
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 872 bits (440), Expect = 0.0 Identities = 559/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 132976 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 132919 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 132918 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 132860 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132859 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 132800 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132799 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 132740 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 132739 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgga 132680 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 132679 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 132620 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132619 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 132560 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132559 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 132500 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132499 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 132445 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132444 ccctgggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 132394 Score = 872 bits (440), Expect = 0.0 Identities = 559/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 103788 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 103845 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 103846 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 103904 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103905 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 103964 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103965 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104024 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| || Sbjct: 104025 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgga 104084 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 104085 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 104144 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104145 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104204 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104205 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 104264 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104265 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 104319 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104320 ccctgggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 104370
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 872 bits (440), Expect = 0.0 Identities = 559/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 132746 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 132689 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 132688 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 132630 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132629 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 132570 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132569 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 132510 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 132509 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 132450 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 132449 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 132390 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132389 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 132330 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132329 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 132270 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 132269 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 132213 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132212 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 132164 Score = 872 bits (440), Expect = 0.0 Identities = 559/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 104123 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 104180 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 104181 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 104239 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104240 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 104299 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104300 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104359 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 104360 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 104419 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104420 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctga 104479 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104480 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 104539 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104540 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 104599 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 104600 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 104656 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104657 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 104705
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 864 bits (436), Expect = 0.0 Identities = 558/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 131645 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 131588 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 131587 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 131529 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131528 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 131469 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131468 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131409 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 131408 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 131349 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 131348 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 131289 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131288 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 131229 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131228 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 131169 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 131168 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 131112 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131111 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 131063 Score = 864 bits (436), Expect = 0.0 Identities = 558/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 102990 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 103047 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 103048 gggagttgaaaataagcatagatccggagattcccgaataggttaacctttcaaactgc- 103106 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103107 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 103166 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103167 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 103226 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 103227 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtaga 103286 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 103287 atgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctga 103346 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103347 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 103406 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 103407 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 103466 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 103467 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 103523 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103524 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 103572
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 864 bits (436), Expect = 0.0 Identities = 558/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 133937 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 133880 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 133879 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 133821 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133820 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 133761 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133760 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 133701 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 133700 cgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgga 133641 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 133640 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 133581 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133580 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 133521 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 133520 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 133461 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 133460 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 133406 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133405 ccctgggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 133355 Score = 864 bits (436), Expect = 0.0 Identities = 558/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 104712 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 104769 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 104770 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 104828 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104829 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 104888 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104889 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 104948 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 104949 cgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgga 105008 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 105009 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 105068 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105069 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 105128 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105129 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 105188 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105189 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 105243 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105244 ccctgggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 105294
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 856 bits (432), Expect = 0.0 Identities = 557/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 140338 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 140281 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 140280 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 140222 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140221 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 140162 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140161 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 140102 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 140101 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcgga 140042 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 140041 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 139982 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139981 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139922 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139921 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 139862 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 139861 ccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-- 139807 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139806 acgggggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 139756 Score = 856 bits (432), Expect = 0.0 Identities = 557/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 109722 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 109779 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109780 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 109838 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109839 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 109898 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109899 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 109958 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 109959 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggcgga 110018 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 110019 atgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 110078 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110079 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110138 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110139 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 110198 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | || ||||||||||||||||| | Sbjct: 110199 ccatcggggagtgaaatagaacatgaaaccg---taagttcccaagcagtgggaggag-- 110253 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110254 acgggggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 110304
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 856 bits (432), Expect = 0.0 Identities = 557/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 21 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 78 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 79 gggagttgaaaataagcgtagatccggagattcccgaataggttaaccttttgaactgc- 137 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||| | |||||| |||||||||||||||||||| || Sbjct: 258 cgtgaaaacggggttgtgggagagcaaaaaaagcgtcgtgctgctaggcgaagcggtgga 317 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||| Sbjct: 318 gtgccgcaccctagatggcgagagtccagtagccgagagcatcactagcttatgctctga 377 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 378 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 437 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 497 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 552 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 553 ccctgggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 603
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 856 bits (432), Expect = 0.0 Identities = 557/592 (94%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 507 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 563 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 564 cgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 612
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 841 bits (424), Expect = 0.0 Identities = 555/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 106027 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 106084 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 106085 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 106143 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106144 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106203 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106204 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106263 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 106264 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 106323 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 106324 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 106383 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106384 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106443 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 106444 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 106503 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106504 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-- 106558 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106559 acgaggactctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106609 Score = 791 bits (399), Expect = 0.0 Identities = 554/595 (93%), Gaps = 12/595 (2%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 135882 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 135825 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 135824 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 135766 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135765 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135706 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135705 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135646 Query: 251 cgtgaaaacggggttgtgggagagc-aatacaagcgttgtgctgctaggcgaagcggttg 309 ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| || | Sbjct: 135645 cgtgaaaacggggttgtgggagagcaaatacaagcgtcgtgctgctaggcgaagcagtgg 135586 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg-ctct 368 |||| |||||||||||||| | |||||||||||||||||||||||||||||| | | || Sbjct: 135585 agtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgcccct 135526 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcag-caaggaccaccttgcaa 427 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 135525 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagccaaggaccaccttgcaa 135466 Query: 428 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 487 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 135465 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 135406 Query: 488 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 547 |||||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| Sbjct: 135405 cccccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggagga 135349 Query: 548 ggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135348 g--acgaggactctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135297
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 841 bits (424), Expect = 0.0 Identities = 555/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 136158 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 136101 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 136100 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 136042 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136041 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135982 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135981 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135922 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 135921 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 135862 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 135861 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 135802 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135801 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 135742 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 135741 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 135682 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 135681 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-- 135627 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135626 acgaggactctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135576 Score = 841 bits (424), Expect = 0.0 Identities = 555/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 106249 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 106306 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||| |||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 106307 gggagttgcaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 106365 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106366 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106425 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106426 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106485 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 106486 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgga 106545 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 106546 gtgttgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 106605 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106606 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 106665 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 106666 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 106725 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 106726 ccatcggggagtgaaatagaacatgaaaccg---taagcttccaagcagtgggaggag-- 106780 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106781 acgaggactctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106831
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 839 bits (423), Expect = 0.0 Identities = 558/595 (93%), Gaps = 10/595 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||| || ||||||||||||||| Sbjct: 46274 ggtggatacctaggcacccagag-acgaag-aagggcgtattaatcgacgaaatgcttcg 46331 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 46332 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactgc- 46390 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 46391 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccaga 46450 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46451 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 46510 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 46511 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 46570 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 46571 gtaccgcaccctagatggctagagtccagtagccgaaagcatcactagcttatgctctga 46630 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46631 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 46690 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 46691 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 46750 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg-ggg 549 ||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| || Sbjct: 46751 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaggc 46807 Query: 550 aaagtg--atctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| | ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 46808 gccgtggaagctctgac-cgcgtgcctgttgaagaatgagccggcgactcatagg 46861
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 136278 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 136221 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136220 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 136162 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136161 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136102 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136101 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136042 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 136041 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 135982 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135981 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 135922 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135921 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135862 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135861 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135802 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135801 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135745 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135744 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135696 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 106352 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 106409 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106410 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 106468 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106469 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106528 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106529 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106588 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106589 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 106648 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106649 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 106708 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106709 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106768 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106769 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106828 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106829 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106885 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106886 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106934
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 136916 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 136859 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136858 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 136800 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136799 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136740 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136739 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136680 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 136679 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 136620 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 136619 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 136560 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136559 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 136500 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 136499 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 136440 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 136439 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 136383 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136382 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 136334 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 106641 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 106698 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106699 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 106757 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106758 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106817 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106818 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106877 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 106878 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 106937 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 106938 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 106997 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106998 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 107057 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107058 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 107117 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 107118 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 107174 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107175 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 107223
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 1546 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 1603 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1604 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 1662 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1663 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 1722 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1723 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 1782 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 1783 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 1842 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1843 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 1902 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1903 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 1962 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1963 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 2022 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 2023 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 2079 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2080 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 2128
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 135524 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 135467 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135466 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135408 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135407 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135348 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135347 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135288 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135287 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135228 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135227 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135168 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135167 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135108 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135107 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135048 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135047 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 134991 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134990 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 134942 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 105512 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 105569 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105570 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105628 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105629 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105688 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105689 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105748 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105749 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105808 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105809 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 105868 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105869 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105928 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105929 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 105988 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 105989 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106045 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106046 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106094
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 135659 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 135602 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135601 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135543 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135542 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135483 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135482 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135423 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135422 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135363 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135362 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135303 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135302 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135243 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135242 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135183 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135182 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135126 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135125 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135077 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 105684 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 105741 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105742 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105800 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105801 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105860 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105861 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105920 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105921 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105980 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105981 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 106040 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106041 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106100 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106101 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106160 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106161 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106217 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106218 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106266
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 135657 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 135600 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135599 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135541 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135540 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135481 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135480 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135421 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135420 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135361 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135360 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135301 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135300 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135241 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135240 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135181 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135180 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135124 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135123 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135075 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 105681 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 105738 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105739 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105797 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105798 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105857 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105858 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105917 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105918 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105977 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105978 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 106037 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106038 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106097 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106098 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106157 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106158 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106214 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106215 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106263
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 135569 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 135512 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135511 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135453 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135452 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135393 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135392 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135333 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135332 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135273 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135272 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135213 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135212 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135153 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135152 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135093 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135092 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135036 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135035 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 134987 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 105559 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 105616 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105617 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105675 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105676 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105735 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105736 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105795 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105796 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105855 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105856 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 105915 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105916 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105975 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105976 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106035 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106036 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106092 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106093 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106141
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 136276 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 136219 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 136218 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 136160 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136159 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 136100 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136099 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 136040 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 136039 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 135980 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135979 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 135920 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135919 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135860 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135859 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135800 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135799 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135743 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135742 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135694 Score = 837 bits (422), Expect = 0.0 Identities = 556/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 106350 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 106407 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 106408 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 106466 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106467 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106526 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106527 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106586 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106587 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 106646 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106647 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 106706 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106707 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106766 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106767 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106826 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106827 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106883 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106884 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106932
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 835 bits (421), Expect = 0.0 Identities = 556/593 (93%), Gaps = 10/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 79 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 80 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 138 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139 tgctgaatccatgggcaggcaagagacaacctaacgaactgaaacatcttagtagccaga 198 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagc-ggcgagcgaaatgggagcagcctaaa 249 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 199 ggaaaagaaagcaaaagcgattcccgtagtagcaggcgagcgaaatgggagcagcctaaa 258 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 309 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 259 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtga 318 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 ||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 319 agtgccgaaccctagatggctagagtccagtagccgaaagcatcactagcttacgctctg 378 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 438 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct: 439 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaacc 498 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 499 cccaccggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 555 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 556 ctgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 605
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 833 bits (420), Expect = 0.0 Identities = 554/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 139482 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 139425 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139424 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 139366 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 139365 tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgga 139306 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139305 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 139246 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 139245 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaa 139186 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 139185 gtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga 139126 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139125 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 139066 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 139065 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 139006 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139005 ccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 138949 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138948 caggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 138900 Score = 833 bits (420), Expect = 0.0 Identities = 554/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 109615 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 109672 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109673 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 109731 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 109732 tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgga 109791 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109792 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 109851 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 109852 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaa 109911 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 109912 gtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga 109971 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109972 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 110031 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 110032 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 110091 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110092 ccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcc 110148 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110149 caggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 110197
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 831 bits (419), Expect = 0.0 Identities = 554/592 (93%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||||||||||||||||||||||||| ||| ||| |||||||| |||||| Sbjct: 81 gggagctgaaaataagcatagatccggagattcccgaatgggttaaccttttgaactgc- 139 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 199 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 200 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 259 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| Sbjct: 260 cgtgaaaacggggttgtgggagagcaatataagtgttgtgttgctaggcgaagcggttga 319 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || |||||||| |||||| | |||||||||||||||||||||||||||||| ||||| | Sbjct: 320 gtcccgcaccccagatggtgagagtccagtagccgaaagcatcactagcttacgctctaa 379 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 439 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 499 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| | | Sbjct: 500 ccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggaggagaa 556 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 557 tcg-gatctctgacc-gcgtgcctgttgaagaatgagccggcgacttatagg 606
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 831 bits (419), Expect = 0.0 Identities = 510/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| | |||||||| |||||||||||||||||| Sbjct: 130513 ggtggatacctaggcacccagag-acgagg-aggggcgtagtaagcgacgaaatgcttcg 130456 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 130455 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac- 130397 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130396 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 130337 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130336 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 130277 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 130276 cgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtgga 130217 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 130216 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 130157 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130156 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 130097 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 130096 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 130037 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 130036 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 129984 Score = 831 bits (419), Expect = 0.0 Identities = 510/536 (95%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| | |||||||| |||||||||||||||||| Sbjct: 101943 ggtggatacctaggcacccagag-acgagg-aggggcgtagtaagcgacgaaatgcttcg 102000 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 102001 gggagttgaaaataagcatagatccggagattcccgaataggtcaacctttcgaactac- 102059 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102060 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 102119 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102120 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 102179 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| || Sbjct: 102180 cgtgaaaacggggttgtgggagagctatacaagcgtcgtgctgctaggcgaagcggtgga 102239 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 102240 gtgccgcaccctagatggcgagagtccagtagccgaaagcatcactagcttatgctctga 102299 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102300 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 102359 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 102360 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaaccc 102419 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 102420 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 102472 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 129963 ccgcgtgcctgttgaagaatgagccggcgactcatagg 129926 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 102493 ccgcgtgcctgttgaagaatgagccggcgactcatagg 102530
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 829 bits (418), Expect = 0.0 Identities = 424/426 (99%) Strand = Plus / Plus Query: 79 aaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgctgaat 138 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 aaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcctgctgaat 60 Query: 139 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 198 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaaga 120 Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 180 Query: 259 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 240 Query: 319 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 241 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 300 Query: 379 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 360 Query: 439 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 420 Query: 499 tagtga 504 |||||| Sbjct: 421 tagtga 426
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 829 bits (418), Expect = 0.0 Identities = 555/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 136007 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 135950 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 135949 gggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc- 135891 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135831 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135830 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135771 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 135770 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 135711 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 135710 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 135651 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135650 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135591 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135590 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135531 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135530 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135474 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135473 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 135425 Score = 829 bits (418), Expect = 0.0 Identities = 555/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 106131 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 106188 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||||| Sbjct: 106189 gggagttgaaaataagcatagatccggggattcccgaatagggcaacctttcgaactgc- 106247 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106248 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 106307 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106308 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 106367 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | | Sbjct: 106368 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccg 106427 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 106428 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctg 106487 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106488 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 106547 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106548 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106607 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106608 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106664 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106665 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 106713
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 829 bits (418), Expect = 0.0 Identities = 555/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 135536 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 135479 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 135478 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 135420 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135419 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 135360 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135359 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 135300 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 135299 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 135240 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 135239 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 135180 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135179 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 135120 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135119 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 135060 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 135059 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 135003 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 135002 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactaatagg 134954 Score = 829 bits (418), Expect = 0.0 Identities = 555/593 (93%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 105526 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 105583 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 105584 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 105642 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105643 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 105702 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105703 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 105762 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct: 105763 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctg 105822 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 105823 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttacgctctg 105882 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105883 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 105942 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105943 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 106002 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 106003 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 106059 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106060 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactaatagg 106108
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 823 bits (415), Expect = 0.0 Identities = 554/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||| Sbjct: 131769 ggtggatacctaggcacccagag-acgagg-aagggcgtattaatcgacgaaatgcttcg 131712 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | Sbjct: 131711 gggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc- 131653 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131652 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 131593 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131592 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 131533 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 131532 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtgga 131473 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 131472 gtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 131413 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 131353 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131352 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 131293 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||| Sbjct: 131292 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg- 131237 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | || | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 131236 accaga-ccctgac-cgcgtgcctgttgaagaatgagccggcgactcatagg 131187 Score = 823 bits (415), Expect = 0.0 Identities = 554/592 (93%), Gaps = 9/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||| Sbjct: 101676 ggtggatacctaggcacccagag-acgagg-aagggcgtattaatcgacgaaatgcttcg 101733 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||| |||||||||||||||| ||||||||||||||| |||| | Sbjct: 101734 gggagttgaaaataagcagagatccggagattcccgaataggtcaacctttcgaacttc- 101792 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101793 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 101852 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101853 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 101912 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 101913 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatcagtgga 101972 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 101973 gtgcggaaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 102032 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102033 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 102092 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 102093 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 102152 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | ||||| ||||||||||||||||| Sbjct: 102153 ccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggggg- 102208 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | || | ||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 102209 accaga-ccctgac-cgcgtgcctgttgaagaatgagccggcgactcatagg 102258
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 823 bits (415), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 823 bits (415), Expect = 0.0 Identities = 509/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtactaccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 566 cgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||| | ||||||||||||||| Sbjct: 588 cgcgtgcctgttgaagaattaaccggcgactcatagg 624
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 819 bits (413), Expect = 0.0 Identities = 555/594 (93%), Gaps = 9/594 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 139691 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 139634 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 139633 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 139575 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139574 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 139515 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139514 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 139455 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tg 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 139454 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcg 139395 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 139394 aatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctg 139335 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139334 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 139275 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 139274 ctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacc 139215 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 139214 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 139158 Query: 550 aaagt-gatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139157 ctactaggactctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 139105 Score = 819 bits (413), Expect = 0.0 Identities = 555/594 (93%), Gaps = 9/594 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 109608 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 109665 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 109666 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 109724 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109725 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 109784 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109785 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 109844 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-g 309 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | Sbjct: 109845 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtgcg 109904 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 109905 aatgctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctg 109964 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109965 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 110024 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 110025 ctaaatactcctgggtgacccatagcgaagtagtaccgtgagggaagggtgaaaagaacc 110084 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 110085 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggaga 110141 Query: 550 aaagt-gatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110142 ctactaggactctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 110194
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 815 bits (411), Expect = 0.0 Identities = 508/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| || ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatccgggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 815 bits (411), Expect = 0.0 Identities = 508/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||||| ||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatcggggagtgaaataaaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 42.1 bits (21), Expect = 2.1 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 566 cgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||| || |||||||| |||||||||||| Sbjct: 588 cgcgtgcctgtttaaaaatgagcc-gcgactcatagg 623
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 815 bits (411), Expect = 0.0 Identities = 508/536 (94%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| Sbjct: 88 gggggttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||||||||||| | ||||||||||||||||||||| |||||||| ||||||| Sbjct: 327 gtgctgcaccctagatggcgagagtccagtagccgaaagcatccctagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 507 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 559 Score = 58.0 bits (29), Expect = 3e-05 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 566 cgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||||| ||||||||||||||||||||| Sbjct: 588 cgcgtgcctgttgaa-aatgagccggcgactcatagg 623
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 805 bits (406), Expect = 0.0 Identities = 550/589 (93%), Gaps = 12/589 (2%) Strand = Plus / Plus Query: 15 gatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcgggga 74 ||||||||||||||||| | |||||| |||||||||| || ||||||||||||||||||| Sbjct: 1 gatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcgggga 58 Query: 75 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 134 ||||||||||||||||||||||||||||||| |||||| |||||||| |||||| |||| Sbjct: 59 gttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc-tgct 117 Query: 135 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 177 Query: 195 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 237 Query: 255 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggt-tgagtg 313 |||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| || Sbjct: 238 aaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagcctgaatg 297 Query: 314 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 373 | |||||| | ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 298 ctgcaccc-atatggcgaaagtccagtagccgaaagcatcactagcttacgctctgaccc 356 Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 416 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 493 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 417 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca 476 Query: 494 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 553 ||| ||||||||||||| |||||||| | |||||||||||||||||||| | | Sbjct: 477 tcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagcca-- 531 Query: 554 tgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 532 -gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 578
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 795 bits (401), Expect = 0.0 Identities = 537/576 (93%), Gaps = 9/576 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 71 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 128 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||| Sbjct: 129 gggagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcgaactgc- 187 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct: 188 tgctgaatccatgggcagacaagagacaacctggcgaactgaaacatcttagtagccgga 247 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 307 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| | Sbjct: 308 cgtgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcggtgaa 367 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||| |||||||||||| | |||||||||||||||||||||||||||||| ||||||| Sbjct: 368 gtgccgaaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctga 427 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 428 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 487 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 488 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccc 547 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||||||||| |||||||| | ||||||||||||| |||||| | Sbjct: 548 ccgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagngggaggagcc 604 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatga 586 || | |||||| |||||||||||||||||||||| Sbjct: 605 caggg--ctctga-ccgcgtgcctgttgaagaatga 637
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 785 bits (396), Expect = 0.0 Identities = 552/595 (92%), Gaps = 12/595 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||| Sbjct: 86284 ggtggatacctaggcacccagag-acgagg-aagggcgtggtaagcgacgaaatgcttcg 86341 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||||| Sbjct: 86342 gggagttgaaaatgagcatagatccggagattcccgaataggttaacccttttaactgc- 86400 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86401 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 86460 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 86461 ggaatagaaagcaaaagcgattcccgtagtagtggcgagcgaaatgggagcagcctaaac 86520 Query: 251 cgtgaaaacggggttgtgggagagc--aatacaagcgttgtgctgctaggcgaagcggtt 308 ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| Sbjct: 86521 cgtgaaaacggggttgtgggagagcccaatataagctctgtgctgctaggcgaagcggtt 86580 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 |||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 86581 gagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctct 86640 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86641 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 86700 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86701 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 86760 Query: 489 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 548 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || Sbjct: 86761 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--gg 86815 Query: 549 gaaagt-gatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 86816 aaaattagatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 86869
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 785 bits (396), Expect = 0.0 Identities = 552/595 (92%), Gaps = 12/595 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||| | |||||||||||||||||| Sbjct: 88370 ggtggatacctaggcacccagag-acgagg-aagggcgtggtaagcgacgaaatgcttcg 88427 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||| ||||||||||||||||||||| ||||||| |||||||| ||||| Sbjct: 88428 gggagttgaaaattagcatagatccggagattcccgaataggttaacctttttcactgc- 88486 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 88487 tgctgaatccatgggcaggcaagagacaacctggtgaactgaaacatcttagtagccaga 88546 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88547 ggaatagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 88606 Query: 251 cgtgaaaacggggttgtgggagagca--atacaagcgttgtgctgctaggcgaagcggtt 308 |||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||| Sbjct: 88607 cgtgaaaacggggttgtgggagagcacaatataagctctgtgctgctaggcgaagcggtt 88666 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 |||| | ||||||||||||| | |||||||||||||||||||||| | ||||| ||||| Sbjct: 88667 gagtcctgcaccctagatggtgagagtccagtagccgaaagcatcattggcttacgctct 88726 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88727 aacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 88786 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88787 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 88846 Query: 489 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 548 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || Sbjct: 88847 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga--gg 88901 Query: 549 gaaagt-gatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 88902 aaaattagatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 88955
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 783 bits (395), Expect = 0.0 Identities = 552/595 (92%), Gaps = 11/595 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 131849 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 131792 Query: 71 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 129 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 131791 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 131732 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 131731 -tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 131673 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131672 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 131613 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 309 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 131612 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 131553 Query: 310 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 367 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 131552 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctc 131493 Query: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131492 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 131433 Query: 428 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 487 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 131432 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 131373 Query: 488 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 547 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 131372 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 131316 Query: 548 ggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131315 ggctcggga-ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 131263 Score = 783 bits (395), Expect = 0.0 Identities = 552/595 (92%), Gaps = 11/595 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 103545 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 103602 Query: 71 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 129 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 103603 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 103662 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||| | |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 103663 -tgctgaatccacgggcaggcaagagacaacctggtgaactgaaacatcttagtagccag 103721 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103722 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 103781 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 309 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 103782 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 103841 Query: 310 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 367 || ||| |||||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 103842 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctc 103901 Query: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103902 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 103961 Query: 428 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 487 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 103962 ggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaagggtgaaaagaa 104021 Query: 488 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 547 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 104022 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 104078 Query: 548 ggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | || |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104079 ggctcggga-ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 104131
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 781 bits (394), Expect = 0.0 Identities = 546/589 (92%), Gaps = 11/589 (1%) Strand = Plus / Minus Query: 15 gatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcgggga 74 ||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||| Sbjct: 142853 gatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcgggga 142796 Query: 75 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 134 ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||| Sbjct: 142795 gttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgct 142737 Query: 135 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142736 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 142677 Query: 195 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142676 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 142617 Query: 255 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtg 313 |||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||| Sbjct: 142616 aaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtg 142557 Query: 314 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 373 | ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 142556 ctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgaccc 142497 Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 142496 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaa 142437 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 493 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 142436 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca 142377 Query: 494 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 553 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | | Sbjct: 142376 tcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca-- 142322 Query: 554 tgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142321 -gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 142275 Score = 781 bits (394), Expect = 0.0 Identities = 546/589 (92%), Gaps = 11/589 (1%) Strand = Plus / Plus Query: 15 gatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcgggga 74 ||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||||| Sbjct: 110475 gatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcgggga 110532 Query: 75 gttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgct 134 ||||||||||||| |||||||||||||||| ||| ||||||||||| |||||| |||| Sbjct: 110533 gttgaaaataagcgcagatccggagattcccgaatgggtcaacctttcgaactgc-tgct 110591 Query: 135 gaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 194 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110592 gaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaa 110651 Query: 195 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110652 aagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtg 110711 Query: 255 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg-agtg 313 |||||||||||||||||||| |||||||||| ||||||||||||||||| | || |||| Sbjct: 110712 aaaacggggttgtgggagagtcatacaagcgtcgtgctgctaggcgaagcagctggagtg 110771 Query: 314 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 373 | ||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 110772 ctgcaccctagatggtgagagtccagtagccgaaagcatcactagcttacgctctgaccc 110831 Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 110832 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggctaa 110891 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 493 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 110892 atactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaaccccca 110951 Query: 494 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaag 553 ||| ||||||||||||| |||||||| | ||||||||||||||||||| | | Sbjct: 110952 tcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtgggaggagcca-- 111006 Query: 554 tgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111007 -gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 111053
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 777 bits (392), Expect = 0.0 Identities = 553/595 (92%), Gaps = 14/595 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || | ||||||||||||| Sbjct: 1789 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatc-acgaaatgcttcg 1845 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 1846 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 1904 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1905 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaccatcttagtagccaga 1964 Query: 191 ggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1965 ggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 2024 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagc-gttgtgctgctaggcgaagc-ggt 307 ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| | Sbjct: 2025 ccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctgctaggcgaagcagcc 2084 Query: 308 tgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 367 || ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2085 cgaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctc 2144 Query: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2145 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaa 2204 Query: 428 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaa 487 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 2205 ggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa 2264 Query: 488 cccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg 547 |||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 2265 cccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagga 2321 Query: 548 ggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2322 gcca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 2372
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 775 bits (391), Expect = 0.0 Identities = 548/593 (92%), Gaps = 12/593 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||| Sbjct: 518 ggtggatacctaggcacccagag-acgagg-aagggcgtattaatcgacgaaatgcttcg 575 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 576 gggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc- 634 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 694 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 754 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 755 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgga 814 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 815 gtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga 874 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 875 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 934 Query: 431 taaatactcctgggtgaccgatagcgaagtagta-ccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| Sbjct: 935 taaatactcctgggtgaccgatagccaaatagtacccgtgagggaaaggtgaaaagaacc 994 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | ||||| |||||||||||||| | Sbjct: 995 cccatcggggagtgaaatagaacatgaaaccg---taagctctcaagcagtgggaggaga 1051 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1052 cagg----ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 1099
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 771 bits (389), Expect = 0.0 Identities = 484/512 (94%), Gaps = 3/512 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 4579 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 4580 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 4638 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4639 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 4698 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4699 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 4758 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4759 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcga 4818 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4819 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 4878 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4879 cccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4938 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4939 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 4998 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | | ||| ||||||||||||| ||||||||| Sbjct: 4999 ctggcggggagtgaaatagaacatgaaaccgt 5030 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 5065 ccgcgtgcctgttgaagaatgagccggcgactcatagg 5102
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 771 bits (389), Expect = 0.0 Identities = 484/512 (94%), Gaps = 3/512 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 4522 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 4579 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 4580 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 4638 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4639 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 4698 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4699 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 4758 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || Sbjct: 4759 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagtcga 4818 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4819 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 4878 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 4879 cccgagtaacatggggcacgtgaaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4938 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4939 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 4998 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | | ||| ||||||||||||| ||||||||| Sbjct: 4999 ctggcggggagtgaaatagaacatgaaaccgt 5030 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 5065 ccgcgtgcctgttgaagaatgagccggcgactcatagg 5102
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 769 bits (388), Expect = 0.0 Identities = 552/594 (92%), Gaps = 16/594 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| || ||||||||||||||| Sbjct: 122 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaatcgacgaaatgcttcg 179 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 180 gggagttgaaaataagcatagatccggagattcccgaatagggcaacctttcgaactgc- 238 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt-agccag 189 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 239 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtgagccag 298 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 358 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag-cggtt 308 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| || Sbjct: 359 ccgtgaaaacggg-ttgtgggagagcaatacaagcgtcgtgctgctaggcgaagacgccc 417 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 418 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 477 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 478 gacccgagtagcatggggcacgtggaatcccgtgtgaatcgacaaggaccaccttgcaag 537 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 538 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 597 Query: 489 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 548 ||| | ||| ||||||||||||| ||||||||| |||||||||||||||||| | Sbjct: 598 ccc-atcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga---g 650 Query: 549 gaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | || | |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 651 gccaggg--ctctgacc-gcgtgcctgttgaagaatgagccggcgactcatagg 701
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 767 bits (387), Expect = 0.0 Identities = 502/536 (93%), Gaps = 6/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 4253 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 4310 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 4311 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 4369 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4370 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 4429 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4430 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 4489 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 4490 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcga 4549 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4550 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 4609 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4610 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4669 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 4670 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 4729 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 4730 ctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 4782 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 4797 ccgcgtgcctgttgaagaatgagccggcgactcatagg 4834
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 767 bits (387), Expect = 0.0 Identities = 502/536 (93%), Gaps = 6/536 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 23672 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 23615 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 23614 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 23556 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23555 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 23496 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 23495 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 23436 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| | || Sbjct: 23435 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgttgctaggcgaagcaatcga 23376 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23375 atgttgcaccctagatggtgaaagtccagtagccgaaagcatcactagcttatgctctga 23316 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23315 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 23256 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 23255 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 23196 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 | ||| ||||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 23195 ctgtcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggagg 23143 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 23128 ccgcgtgcctgttgaagaatgagccggcgactcatagg 23091
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 765 bits (386), Expect = 0.0 Identities = 403/406 (99%), Gaps = 2/406 (0%) Strand = Plus / Plus Query: 197 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 257 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 317 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 376 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 377 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 436 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 437 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 497 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtga 556 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtga 359 Query: 557 tctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 404
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 761 bits (384), Expect = 0.0 Identities = 543/590 (92%), Gaps = 11/590 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtattaatcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 88 gggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct: 447 taaatactcctgggtgaccgatagcgaagtaataccgtgagggaagggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| | Sbjct: 507 ccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggaggagac 563 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcata 600 | | |||||| | |||||||||||||| ||||||||||||||||||| Sbjct: 564 agg----ctctgaac-gcgtgcctgttgaaaaatgagccggcgactcata 608
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 761 bits (384), Expect = 0.0 Identities = 401/404 (99%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 259 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 319 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 379 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 439 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 499 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 558 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 559 tctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 402
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 761 bits (384), Expect = 0.0 Identities = 401/404 (99%), Gaps = 2/404 (0%) Strand = Plus / Plus Query: 199 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 258 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 259 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 318 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 319 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 378 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 379 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 439 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 499 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatc 558 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatc 359 Query: 559 tctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 402
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 759 bits (383), Expect = 0.0 Identities = 400/403 (99%), Gaps = 2/403 (0%) Strand = Plus / Plus Query: 200 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 260 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 320 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 379 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 380 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 440 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 500 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 559 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 359 Query: 560 ctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 360 ctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 401
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 759 bits (383), Expect = 0.0 Identities = 400/403 (99%), Gaps = 2/403 (0%) Strand = Plus / Plus Query: 200 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 259 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 260 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 319 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 320 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 379 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 380 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 439 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 440 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 499 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 500 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatct 559 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatct 362 Query: 560 ctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||| |||||||||||||||||||||||||||||||||||||| Sbjct: 363 ctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 404
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 755 bits (381), Expect = 0.0 Identities = 398/401 (99%), Gaps = 2/401 (0%) Strand = Plus / Plus Query: 202 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 262 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 322 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 381 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 382 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 442 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 502 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctct 561 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctct 359 Query: 562 gacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||||||||||||||||||||||||||||||||||| Sbjct: 360 ga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 399
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 749 bits (378), Expect = 0.0 Identities = 545/593 (91%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||| |||| || ||||||||||||||| Sbjct: 52664 ggtggatacctaggcacccagag-acgagg-aaggatgtagtaatcgacgaaatgcttcg 52607 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 52606 gggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc- 52548 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 52547 tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccaga 52488 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52487 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 52428 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttg 309 || |||||||||||||||||||||||||| ||| || ||||||||||||||| | | ||| Sbjct: 52427 cgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttg 52368 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||| Sbjct: 52367 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctg 52308 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52307 acccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 52248 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 52247 ctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacc 52188 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 52187 cccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 52131 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 52130 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 52082 Score = 749 bits (378), Expect = 0.0 Identities = 545/593 (91%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||| |||| || ||||||||||||||| Sbjct: 37164 ggtggatacctaggcacccagag-acgagg-aaggatgtagtaatcgacgaaatgcttcg 37221 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 37222 gggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc- 37280 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 37281 tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccaga 37340 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37341 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 37400 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttg 309 || |||||||||||||||||||||||||| ||| || ||||||||||||||| | | ||| Sbjct: 37401 cgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttg 37460 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||| Sbjct: 37461 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctg 37520 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37521 acccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 37580 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 37581 ctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacc 37640 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 37641 cccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 37697 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 37698 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 37746
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 749 bits (378), Expect = 0.0 Identities = 545/593 (91%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||| |||| || ||||||||||||||| Sbjct: 4092 ggtggatacctaggcacccagag-acgagg-aaggatgtagtaatcgacgaaatgcttcg 4149 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||| Sbjct: 4150 gggagttgaaaataagcatagatccggagattcccgaatagggcaaccttttgaactgc- 4208 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4209 tgctgaatccatgggcagacaagagataacctggcgaactgaaacatcttagtagccaga 4268 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4269 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagcagcctaaac 4328 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaa-gcggttg 309 || |||||||||||||||||||||||||| ||| || ||||||||||||||| | | ||| Sbjct: 4329 cgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctgctaggcgaacgagcttg 4388 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||| |||||| ||||||| Sbjct: 4389 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcattagcttgtgctctg 4448 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4449 acccgagtagcatgggacacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 4508 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 4509 ctaaatactcctgggtaaccgatagttaagtagtaccgtgagggaagggtgaaaagaacc 4568 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| |||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 4569 cccattggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 4625 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4626 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 4674
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 747 bits (377), Expect = 0.0 Identities = 546/593 (92%), Gaps = 11/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 116187 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 116130 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 116129 gggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc- 116071 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 116070 tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 116011 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 116010 ggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaac 115951 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||| Sbjct: 115950 cgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttga 115892 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| | Sbjct: 115891 gtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaa 115832 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 115831 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 115772 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115771 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 115712 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 115711 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 115657 Query: 551 aagtg-atctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || || |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 115656 aattgaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 115605 Score = 747 bits (377), Expect = 0.0 Identities = 546/593 (92%), Gaps = 11/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 85933 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 85990 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||| ||||||| Sbjct: 85991 gggagctgaaaataagtatagatccggagattcccgaataggttaacctttgaaactgc- 86049 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 86050 tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 86109 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 86110 ggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggaacagcctaaac 86169 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||| ||||||| |||| | | ||| |||||| ||||||||||||| ||||| Sbjct: 86170 cgtgaaaacggg-ttgtgggggagctaaataagtgttgtgttgctaggcgaagcagttga 86228 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | ||||||||||||| ||||||||||| ||||||||| |||||||||| ||||| | Sbjct: 86229 gtcctgcaccctagatggtgaaagtccagtaaccgaaagcagcactagcttaggctctaa 86288 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86289 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 86348 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86349 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 86408 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 86409 ccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag-- 86463 Query: 551 aagtg-atctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || || |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 86464 aattgaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 86515
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 743 bits (375), Expect = 0.0 Identities = 500/536 (93%), Gaps = 7/536 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||| || ||||||||||||||| Sbjct: 30 ggtggatacctaggcacccagag-acgagg-aagggcgtattaatcgacgaaatgcttcg 87 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| |||||||||||||||| |||||| |||||||| |||| | Sbjct: 88 gggagttgaaaataagccgagatccggagattcccgaatagggcaacctttcgaacttc- 146 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 147 tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 206 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 207 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 266 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || Sbjct: 267 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaatctgtgga 326 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| | ||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 327 gtgcggtaccctagatggtgaaagtccagtagccgaaagcatcactagcttacgctctga 386 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 387 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 447 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaa-cc 505 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||||| ||| |||||||| | ||||| |||||||||||||| Sbjct: 506 ccatcggggagtgaaataaaacatgaaaccg---taagctctcaagcagtgggagg 558
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 741 bits (374), Expect = 0.0 Identities = 547/598 (91%), Gaps = 14/598 (2%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||| ||| | |||||| ||||||||||||| ||||||||||||||| Sbjct: 128424 ggtggatacctaggcactcagag-acgagg-aagggcgtagcaatcgacgaaatgcttcg 128367 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 128366 gggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc- 128308 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128307 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 128248 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 128247 ggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaac 128188 Query: 251 cgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagc 304 |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 128187 cgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagc 128128 Query: 305 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 364 |||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | | Sbjct: 128127 ggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacg 128068 Query: 365 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 424 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128067 ctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 128008 Query: 425 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 484 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 128007 caaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaa 127948 Query: 485 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 544 ||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 127947 gaacccccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga 127891 Query: 545 gggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | | | ||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct: 127890 ggagaattg-gatctctgacc-gcatgcctgttgaggaatgagccggcgactcatagg 127835 Score = 741 bits (374), Expect = 0.0 Identities = 547/598 (91%), Gaps = 14/598 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||| ||| | |||||| ||||||||||||| ||||||||||||||| Sbjct: 95023 ggtggatacctaggcactcagag-acgagg-aagggcgtagcaatcgacgaaatgcttcg 95080 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 95081 gggagctgaaaacaagcatagatccggagattcccgaataggttaaccttttgaactgc- 95139 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 95199 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||| ||||||||| ||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 95200 ggaaaggaaagcaaacgcgattcccgtagtagcggcgagcgaagtgggagtagcctaaac 95259 Query: 251 cgtgaaaacggggttgtgggagagc------aatacaagcgttgtgctgctaggcgaagc 304 |||||||||||||||||||| |||| ||||||||| ||||||||||||||||||| Sbjct: 95260 cgtgaaaacggggttgtgggggagcgatacaaatacaagctttgtgctgctaggcgaagc 95319 Query: 305 ggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatg 364 |||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | | Sbjct: 95320 ggttgagtcccgcaccctagatggcaagagtccagtagccgaaagcatcactagctcacg 95379 Query: 365 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 424 |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95380 ctctaacccaagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 95439 Query: 425 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 484 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 95440 caaggctaaatactcctgggtgaccgatagcgaagcagtaccgtgagggaagggtgaaaa 95499 Query: 485 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 544 ||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 95500 gaacccccataggggagtgaaatagaacatgaaaccgta---agctcccaagcagtggga 95556 Query: 545 gggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | | | ||||||||||| || |||||||||| |||||||||||||||||||||| Sbjct: 95557 ggagaattg-gatctctgacc-gcatgcctgttgaggaatgagccggcgactcatagg 95612
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 737 bits (372), Expect = 0.0 Identities = 544/593 (91%), Gaps = 9/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 2066 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 2123 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 2124 gggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc- 2182 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2183 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 2242 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 2243 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaac 2302 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||| Sbjct: 2303 cgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttga 2362 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctg 369 || | ||||||||||||| | |||||||||||||||||||| || | || ||||||| Sbjct: 2363 gtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctcta 2422 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2423 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 2482 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2483 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 2542 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || | Sbjct: 2543 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggag 2598 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2599 aatcgaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 2650
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 737 bits (372), Expect = 0.0 Identities = 544/593 (91%), Gaps = 9/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 118127 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 118070 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 118069 gggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc- 118011 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118010 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 117951 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 117950 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaac 117891 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||| Sbjct: 117890 cgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttga 117831 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctg 369 || | ||||||||||||| | |||||||||||||||||||| || | || ||||||| Sbjct: 117830 gtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctcta 117771 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 117770 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 117711 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 117710 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 117651 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || | Sbjct: 117650 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggag 117595 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 117594 aatcgaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 117543 Score = 737 bits (372), Expect = 0.0 Identities = 544/593 (91%), Gaps = 9/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 89975 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 90032 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 90033 gggagctgaaaataagcatagatccggagattcccgaataggttaaccttttgaactgc- 90091 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90092 tgctgaattcataggcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 90151 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 90152 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggactagcctaaac 90211 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||| | ||| ||||| ||||||||||||| ||||| Sbjct: 90212 cgtgaaaacggggttgtgggagagcaaaataagtgttgttttgctaggcgaagcagttga 90271 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcacta-gcttatgctctg 369 || | ||||||||||||| | |||||||||||||||||||| || | || ||||||| Sbjct: 90272 gtcctgcaccctagatggtgagagtccagtagccgaaagcataacaacactcatgctcta 90331 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 90332 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaagg 90391 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 90392 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 90451 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || | Sbjct: 90452 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggag 90507 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 90508 aatcgaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 90559
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 735 bits (371), Expect = 0.0 Identities = 542/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaag-aagggcgtagcaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||||||||| ||||||||||||||| ||||||| |||||||| |||||| Sbjct: 81 gggagctgaaaataagcatggatccggagattcccgaataggttaaccttttgaactgc- 139 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 tgctgaattcataggcagacaagagacaacctggcgaactgaaacatcttagtagccaga 199 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 200 ggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaaatgggagtagcctaaac 259 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| |||||| | |||||||| |||||||||||| ||||| Sbjct: 260 cgtgaaaacggggttgtgggggagcaaagtaggcgttgtgtcgctaggcgaagcagttga 319 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 | | ||||| ||||||| | |||||||||||||||||||||||||| ||||||||| | Sbjct: 320 atcctgcaccatagatggtgagagtccagtagccgaaagcatcactagtttatgctctaa 379 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 380 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgtaaggc 439 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 499 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||||||||||||||||| || || Sbjct: 500 ccataggggagtgaaatagaacatgaaaccg---taagctcccaagcagtggga-ggaga 555 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 556 atcgaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 606
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 731 bits (369), Expect = 0.0 Identities = 456/479 (95%), Gaps = 6/479 (1%) Strand = Plus / Plus Query: 14 ggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcgggg 73 |||||||||||||||||| | |||||| |||||||||| ||||||||||||||||||||| Sbjct: 22 ggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcgggg 79 Query: 74 agttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctgc 133 |||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| ||| Sbjct: 80 agttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tgc 138 Query: 134 tgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 193 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139 tgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccagagga 198 Query: 194 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 199 aaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgt 258 Query: 254 gaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtg 313 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| || | Sbjct: 259 gaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggtggaata 318 Query: 314 ccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc 373 | |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| Sbjct: 319 ctgcaccctagatggcgatagtccagtagccgaaagcatcactagcttacgctctgaccc 378 Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 438 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccc 492 ||||| | |||||||||||| |||||||||||||||||||| |||| ||||||||||| Sbjct: 439 atactac--ggtgaccgatagtgaagtagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 728 bits (367), Expect = 0.0 Identities = 541/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 3912 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 3969 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 3970 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 4028 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 4029 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 4088 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4089 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 4148 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 4149 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 4208 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 4209 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 4268 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4269 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 4328 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4329 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 4388 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 4389 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 4444 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 4445 atcggatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 4495
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 728 bits (367), Expect = 0.0 Identities = 541/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 6 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 63 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||||||| |||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 64 gggagctgaaaataagtatagatccggagattcccgaataggttaaccttttaaactgc- 122 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||| || |||||||||||||||||||||||||||||||||||||||| || Sbjct: 123 tgctgaatccataggcgggcaagagacaacctggcgaactgaaacatcttagtagccgga 182 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| |||||||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 183 ggaagagaaagcaaaagcgattctcgtagtagcggcgagcgaaacgggagcagcctaaac 242 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||| |||| | | |||| |||| ||||||||||||| ||||| Sbjct: 243 cgtgaaaacggggttgtgggggagctaaagaagcattgtattgctaggcgaagcagttga 302 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | ||||||||||||| | ||||||||| |||||||||| || ||||| ||||| | Sbjct: 303 gtcctgcaccctagatggtgagagtccagtaaccgaaagcattacaagcttgggctctaa 362 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 363 cccgagtaacatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 422 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 423 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 482 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||||||| |||| ||||||||||||||| | | Sbjct: 483 ccatcggggagtgaaatagaacatgaaaccgta---agcttccaagcagtgggaggagaa 539 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 540 tcg-gatctctgacc-gcgtgcctgttgaagaatgagccggcgacttatagg 589
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 728 bits (367), Expect = 0.0 Identities = 541/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 79 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 80 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 138 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 198 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 199 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 258 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 259 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 318 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 319 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 378 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 438 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 498 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 499 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 554 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 555 atcggatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 605
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 728 bits (367), Expect = 0.0 Identities = 447/470 (95%), Gaps = 3/470 (0%) Strand = Plus / Plus Query: 13 tggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcggg 72 ||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||||| Sbjct: 1 tggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcggg 58 Query: 73 gagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcctg 132 ||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||| || Sbjct: 59 gagttgaaaataagcgtagatccggagattcccgaataggtcaacctttcaaactgc-tg 117 Query: 133 ctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagagg 192 | ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 118 ccgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtaaccagagg 177 Query: 193 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 178 aaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 237 Query: 253 tgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagt 312 |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 238 tgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcggccgaac 297 Query: 313 gccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacc 372 ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 298 accgcaccctagatggtgggagtccagtagccgaaagcatcactagcttacgctctgacc 357 Query: 373 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 432 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 cgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggcta 417 Query: 433 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 482 ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 418 aatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaa 467
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 728 bits (367), Expect = 0.0 Identities = 541/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 151223 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 151166 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 151165 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 151107 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 151106 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 151047 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 151046 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 150987 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 150986 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 150927 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 150926 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 150867 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150866 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 150807 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150806 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 150747 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 150746 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 150691 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 150690 atcggatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 150640 Score = 728 bits (367), Expect = 0.0 Identities = 541/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 117443 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 117500 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 117501 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 117559 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 117560 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 117619 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 117620 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 117679 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 117680 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 117739 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 117740 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 117799 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117800 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 117859 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117860 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 117919 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 117920 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 117975 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 117976 atcggatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 118026
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 728 bits (367), Expect = 0.0 Identities = 541/592 (91%), Gaps = 8/592 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 79 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 80 gggagctgaaaagaagcatagatccggagattcccgaataggttaaccttttgaactgc- 138 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || || | |||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139 tgctgaattcacaagtaagcaagagacaacttggcgaactgaaacatcttagtagccaga 198 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 199 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 258 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||| Sbjct: 259 cgtgaaaacggggttgtgggagagcaatataagcgttgtgctgctaggtgaagcagttga 318 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 || | |||||| |||||| | ||||||||||||||||||| |||| |||| || | | Sbjct: 319 gttctgcaccccagatggtgagagtccagtagccgaaagcaccactgtcttacactttaa 378 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 379 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 438 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 439 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 498 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| ||||| || | |||| |||||||||| || || || Sbjct: 499 ccatcggggagtgaaatagaacatgaaatcg---taagcttccaagcagtgaga-ggaga 554 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 555 atcggatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 605
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 726 bits (366), Expect = 0.0 Identities = 544/596 (91%), Gaps = 12/596 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||||||| || ||||||||||||||| ||||||| ||||||||||||||| Sbjct: 81 gggagctgaaaataagtatggatccggagattcccgaataggttaaccttttaaactgc- 139 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| || |||||||||||||| ||||||||||||||||||||||||| || Sbjct: 140 tgctgaattcataggcgggcaagagacaacccggcgaactgaaacatcttagtagccgga 199 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 200 ggaaaagaaagcaaaagcgattctcgtagtagcggcgagcgaaatgggagcggcctaaac 259 Query: 251 cgtgaaaacggggttgtgggagagcaatacaa----gcgttgtgctgctaggcgaagcgg 306 |||||||||||||||||||| |||| |||||| || ||| ||||||||||||||| | Sbjct: 260 cgtgaaaacggggttgtgggggagctatacaaataagcattgcgctgctaggcgaagcag 319 Query: 307 ttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgct 366 |||||| | |||||| |||||| | ||||||||| |||||||||| || | |||||||| Sbjct: 320 ttgagtcctgcaccccagatggtgagagtccagtaaccgaaagcataacaatcttatgct 379 Query: 367 ctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 426 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 ctaacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgca 439 Query: 427 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 aggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaaga 499 Query: 487 acccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 500 acccccatcggggagtgaaatagaacatgaaaccgta---agctcccaagcagtgggagg 556 Query: 547 gggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | | ||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 557 agaatcg-gatctctgacc-gcgtgcctgttgaagaatgagccggcgacttatagg 610
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 718 bits (362), Expect = 0.0 Identities = 547/593 (92%), Gaps = 22/593 (3%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 711 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 654 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||||||| ||||||||||||||||| ||||||||| ||| |||| | Sbjct: 653 gggagttgaaaataagcgtagatccggagattcccgaataggtca--ctt---gactg-c 600 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||||| || |||| ||| ||||||||||||||||| Sbjct: 599 tgctgaatccatg-gcaggcaagagaca--ct-gcga--tga-acatcttagtagccaga 547 Query: 191 ggaaaagaaa-gcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 ggaaaagaaaggcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 487 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 309 |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| | Sbjct: 486 ccgtgaaaacggggttgtgggagagcgatacaagcgtcgtgctgctaggcgaagcggtgg 427 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 ||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 426 agtgctgcaccctagatggcgagagtccagtagccgaaagcatcactagcttacgctctg 367 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 366 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 307 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 306 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacc 247 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 246 cccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggagc 190 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 189 ccgggg--ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 140
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 716 bits (361), Expect = 0.0 Identities = 476/509 (93%), Gaps = 9/509 (1%) Strand = Plus / Minus Query: 95 cggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaaga 154 ||||||||||| |||||| |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 512 cggagattcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaaga 454 Query: 155 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 214 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcc 394 Query: 215 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 274 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 393 cgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagag 334 Query: 275 caatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaa 333 |||||||||||| ||||||||||||||||| | || ||| |||||||||||||| ||| Sbjct: 333 caatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaa 274 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 214 Query: 394 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 453 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 213 aatcccgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgata 154 Query: 454 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 513 |||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 153 gcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaaca 94 Query: 514 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcc 573 |||||||| | |||||||||||||||||||| | | | |||||| ||||||||| Sbjct: 93 tgaaaccg---taagctcccaagcagtgggaggagcca---gggctctga-ccgcgtgcc 41 Query: 574 tgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||||||||||||| Sbjct: 40 tgttgaagaatgagccggcgactcatagg 12
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 714 bits (360), Expect = 0.0 Identities = 541/593 (91%), Gaps = 9/593 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 146537 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 146480 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | Sbjct: 146479 gggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac- 146421 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 146420 tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccaga 146361 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 146360 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 146301 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| Sbjct: 146300 cgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttga 146241 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctg 369 || | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 146240 gtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctcca 146181 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 146180 acccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaagg 146121 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 146120 ctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacc 146061 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 ||| ||| ||||||||||||| |||||||| | ||||||||||||||||| || | Sbjct: 146060 cccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggag 146005 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||| |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 146004 aatcggatccctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 145953 Score = 714 bits (360), Expect = 0.0 Identities = 541/593 (91%), Gaps = 9/593 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 111925 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 111982 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||| ||||| ||||||||||||||| ||||||| |||||||| |||| | Sbjct: 111983 gggagctgaaaatgagcatggatccggagattcccgaataggttaaccttttgaactac- 112041 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 112042 tgctgaattcataggcaggcgagagacaacctggcgaactgaaacatcttagtagccaga 112101 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112102 ggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagtagcctaaac 112161 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 ||||||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||| Sbjct: 112162 cgtgaaaacggggttgtgggagagcaatataagcgttttgctgctaggcgaagcagttga 112221 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagc-ttatgctctg 369 || | | ||||||||||| | |||||||||||||||||||||||| || |||||||| Sbjct: 112222 gtcctgtaccctagatggtgagagtccagtagccgaaagcatcactggctttatgctcca 112281 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 112282 acccgagtagcatggggcacgcagaatcccgtgtgaatcagcaaggaccaccttgtaagg 112341 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 112342 ctaaatactcctgggtgaccgatagcaaagtagtaccgtgagggaaaggtgaaaagaacc 112401 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 ||| ||| ||||||||||||| |||||||| | ||||||||||||||||| || | Sbjct: 112402 cccgtcggggagtgaaatagaacatgaaaccg---taggctcccaagcagtggga-ggag 112457 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || |||| |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 112458 aatcggatccctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 112509
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 710 bits (358), Expect = 0.0 Identities = 364/366 (99%) Strand = Plus / Plus Query: 88 atagatccggagattcccaaataggtcaaccttttaaactgcctgctgaatccatgagca 147 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 atagatccggagattcccaaataggtcaaccttttgaactgcctgctgaatccatgagca 60 Query: 148 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 120 Query: 208 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 180 Query: 268 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatg 240 Query: 328 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 387 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 241 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 300 Query: 388 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 360 Query: 448 ccgata 453 |||||| Sbjct: 361 ccgata 366
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 702 bits (354), Expect = 0.0 Identities = 447/474 (94%), Gaps = 8/474 (1%) Strand = Plus / Plus Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 308 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 309 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 368 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 369 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 429 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 488 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 489 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 548 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 549 gaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 434 cca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 483
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 682 bits (344), Expect = 0.0 Identities = 378/387 (97%), Gaps = 2/387 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | | |||| ||||||||||||||||||||||||||||| Sbjct: 123448 ggtggatacctaggtacccagag-atgagg-aagggcgtagcaagcgacgaaatgcttcg 123391 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 123390 gggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcc 123331 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123330 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 123271 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123270 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 123211 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123210 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 123151 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123150 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgc 123091 Query: 371 cccgagtagcatggggcacgtggaatc 397 ||||||||||||||||||||||||||| Sbjct: 123090 cccgagtagcatggggcacgtggaatc 123064 Score = 385 bits (194), Expect = e-103 Identities = 211/214 (98%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 389 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgc 122643 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||||||| |||||||||| Sbjct: 122642 gtgcctgttgaagaatgagccggtgactcatagg 122609
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 682 bits (344), Expect = 0.0 Identities = 378/387 (97%), Gaps = 2/387 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | | |||| ||||||||||||||||||||||||||||| Sbjct: 12825989 ggtggatacctaggtacccagag-atgagg-aagggcgtagcaagcgacgaaatgcttcg 12825932 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 12825931 gggagttgaaattaagcatagatccggagattcccaaataggtcaaccttttgaactgcc 12825872 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825871 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 12825812 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825811 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 12825752 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825751 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 12825692 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 12825691 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgc 12825632 Query: 371 cccgagtagcatggggcacgtggaatc 397 ||||||||||||||||||||||||||| Sbjct: 12825631 cccgagtagcatggggcacgtggaatc 12825605 Score = 385 bits (194), Expect = e-103 Identities = 211/214 (98%), Gaps = 2/214 (0%) Strand = Plus / Minus Query: 389 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgc 12825184 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||||||| |||||||||| Sbjct: 12825183 gtgcctgttgaagaatgagccggtgactcatagg 12825150 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 644 bits (325), Expect = 0.0 Identities = 378/394 (95%), Gaps = 15/394 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 ||||||||||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccgc 75129 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||| Sbjct: 75128 gtgcctgttgaagaatgagccggcgactcatagg 75095 Score = 367 bits (185), Expect = 3e-98 Identities = 204/208 (98%), Gaps = 2/208 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 75690 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 75633 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 75632 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 75573 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75572 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 75513 Query: 191 ggaaaagaaagcaaaagcgattcccgta 218 |||||||||||||||||||||||||||| Sbjct: 75512 ggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 644 bits (325), Expect = 0.0 Identities = 378/394 (95%), Gaps = 15/394 (3%) Strand = Plus / Plus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 ||||||||||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccgc 382409 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||| Sbjct: 382410 gtgcctgttgaagaatgagccggcgactcatagg 382443 Score = 367 bits (185), Expect = 3e-98 Identities = 204/208 (98%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 381848 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 381905 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 381906 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 381965 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381966 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 382025 Query: 191 ggaaaagaaagcaaaagcgattcccgta 218 |||||||||||||||||||||||||||| Sbjct: 382026 ggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 644 bits (325), Expect = 0.0 Identities = 378/394 (95%), Gaps = 15/394 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 ||||||||||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccgc 113220 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||| Sbjct: 113219 gtgcctgttgaagaatgagccggcgactcatagg 113186 Score = 367 bits (185), Expect = 3e-98 Identities = 204/208 (98%), Gaps = 2/208 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 113781 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 113724 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 113723 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 113664 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113663 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 113604 Query: 191 ggaaaagaaagcaaaagcgattcccgta 218 |||||||||||||||||||||||||||| Sbjct: 113603 ggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 644 bits (325), Expect = 0.0 Identities = 378/394 (95%), Gaps = 15/394 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 ||||||||||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccgc 367902 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||| Sbjct: 367901 gtgcctgttgaagaatgagccggcgactcatagg 367868 Score = 644 bits (325), Expect = 0.0 Identities = 378/394 (95%), Gaps = 15/394 (3%) Strand = Plus / Minus Query: 214 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 274 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 334 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 393 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 394 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 448 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 449 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 509 gaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgc 568 ||||||||||||||||||||||||| ||| |||||||||||||||||| |||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------gga-ggggaaagtgatctctga-ccgc 184507 Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||| Sbjct: 184506 gtgcctgttgaagaatgagccggcgactcatagg 184473 Score = 367 bits (185), Expect = 3e-98 Identities = 204/208 (98%), Gaps = 2/208 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 368463 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 368406 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 368405 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 368346 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368345 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 368286 Query: 191 ggaaaagaaagcaaaagcgattcccgta 218 |||||||||||||||||||||||||||| Sbjct: 368285 ggaaaagaaagcaaaagcgattcccgta 368258 Score = 367 bits (185), Expect = 3e-98 Identities = 204/208 (98%), Gaps = 2/208 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 185068 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 185011 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 185010 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 184951 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184950 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 184891 Query: 191 ggaaaagaaagcaaaagcgattcccgta 218 |||||||||||||||||||||||||||| Sbjct: 184890 ggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagta 184 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 638 bits (322), Expect = e-180 Identities = 532/593 (89%), Gaps = 12/593 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||| |||| || ||||||||||||||| Sbjct: 22 ggtggatacctaggcacccagag-acgagg-aagggtgtagtaatcgacgaaatgcttcg 79 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||| |||||||| ||| || ||||||| | ||||| Sbjct: 80 gggagttgaaaataagcatagatccgtagattcccgaatggggtaacctttcacactgc- 138 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 139 tgctcaatccatgggcaggaaagagacaacctggcgaactgaaacatcttagtagccaga 198 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 199 ggaaaataaagcaaaagcgattcccatagtagcggcgagcgaaatgggatcagcctaaac 258 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 || |||||||||||||||||||||||||| |||||| ||||||||||||||||| | || Sbjct: 259 cgcgaaaacggggttgtgggagagcaataaaagcgtcgtgctgctaggcgaagcagctta 318 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | || |||||||||||||| |||||||||||| | |||||||||||| || |||||| Sbjct: 319 aatgatgcaccctagatggcgaaagtccagtagtcaaaagcatcactacgttgcgctctg 378 Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| Sbjct: 379 acccgagtagcatgggacacgtgtaatcccgtgtgaatcagcaaggaccaccttgcaagg 438 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||| ||| |||| ||||||||||||||||||| ||||||||||| | Sbjct: 439 ctaaatactcctgggtaaccaatagtaaagtagtaccgtgagggaagggtgaaaagaa-c 497 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| |||| ||||||||||||| |||||||| | |||| ||||||||||||||| | Sbjct: 498 cccattggggagtgaaatagaacatgaaaccg---taagctaccaagcagtgggaggagc 554 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 555 ca---gggctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 603
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 115 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 174 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 175 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 235 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 294 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 295 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 354 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 355 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 414 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 415 gaccaccttgcaaggctaaatactcctgggtg 446 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 531 bits (268), Expect = e-148 Identities = 377/406 (92%), Gaps = 7/406 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 2621 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 2678 Query: 71 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 129 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 2679 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 2738 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2739 -tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccag 2797 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2798 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 2857 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 309 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 2858 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 2917 Query: 310 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 367 || ||| |||||||||||||| | |||||||||||||||||||||||| ||||| |||| Sbjct: 2918 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctc 2976 Query: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 413 ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 2977 tgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 531 bits (268), Expect = e-148 Identities = 377/406 (92%), Gaps = 7/406 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 876 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 933 Query: 71 gggagttgaaaataagcatagatccggagattcccaa-ataggtcaaccttttaaactgc 129 ||||||||||||||||| ||||||||| ||||||| | |||||||||||||| |||||| Sbjct: 934 gggagttgaaaataagcgtagatccggggattcccgatataggtcaacctttcgaactgc 993 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 994 -tgctgaatccacgggcaggcaagagacaacttggtgaactgaaacatcttagtagccag 1052 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1053 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 1112 Query: 250 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttg 309 |||||||||||||||||||||||||| ||||||| || ||||||||||||||||| | | Sbjct: 1113 ccgtgaaaacggggttgtgggagagctatacaagtgtcgtgctgctaggcgaagcagcag 1172 Query: 310 ag--tgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctc 367 || ||| |||||||||||||| | |||||||||||||||||||||||| ||||| |||| Sbjct: 1173 agaatgctgcaccctagatggcgagagtccagtagccgaaagcatcact-gcttacgctc 1231 Query: 368 tgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaa 413 ||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1232 tgacccgagtagcatagggcacgtggaatcccgtgtgaatcagcaa 1277
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 505 bits (255), Expect = e-140 Identities = 272/275 (98%), Gaps = 2/275 (0%) Strand = Plus / Plus Query: 328 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 387 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 388 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 448 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 508 agaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccg 567 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccg 238 Query: 568 cgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||||||||||||||||||| Sbjct: 239 cgtgcctgttgaagaatgagccggcgactcatagg 273
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 494 bits (249), Expect = e-136 Identities = 506/586 (86%), Gaps = 7/586 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | |||||||| |||| ||||||||||||||| Sbjct: 143941 ggtggatacctaggcacccagag-acgaag-aagggcgtggcaaacgacgaaatgcttcg 143998 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||| | |||||||||||||||||| ||||||| |||||| |||||||| Sbjct: 143999 gggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcc 144058 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| || Sbjct: 144059 tgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccgga 144118 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||| | |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||| Sbjct: 144119 ggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaac 144178 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||| ||||||||||||||||| || || | || | ||||||||||| ||||| Sbjct: 144179 cgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttga 144238 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| | Sbjct: 144239 gtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaa 144298 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct: 144299 cccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggc 144358 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 144359 taaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaaccc 144418 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||||||||| |||||||| ||||||||||||||||||| || || Sbjct: 144419 ccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggaga 144474 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 | | ||||||| | |||||||||||||||||||||||||||||||| Sbjct: 144475 atgagatctct-aaccgcgtgcctgttgaagaatgagccggcgact 144519 Score = 494 bits (249), Expect = e-136 Identities = 506/586 (86%), Gaps = 7/586 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | |||||||| |||| ||||||||||||||| Sbjct: 88910 ggtggatacctaggcacccagag-acgaag-aagggcgtggcaaacgacgaaatgcttcg 88853 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||||||| | |||||||||||||||||| ||||||| |||||| |||||||| Sbjct: 88852 gggagccgaaaataggtatagatccggagattcccgaataggttaaccttccaaactgcc 88793 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || ||||| |||||||||||| ||||||||||||||||||||||||| || Sbjct: 88792 tgctgaattcagaagcagacaagagacaacccggcgaactgaaacatcttagtagccgga 88733 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||| | |||||||||||||||||| ||||| ||||||| |||| |||| ||||||||| Sbjct: 88732 ggaggaaaaagcaaaagcgattcccctagtaacggcgagtgaaacgggaagagcctaaac 88673 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttga 310 |||||| ||||||||||||||||| || || | || | ||||||||||| ||||| Sbjct: 88672 cgtgaagacggggttgtgggagagtgatgagggcttcgttttactaggcgaagcagttga 88613 Query: 311 gtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga 370 |||| |||||| |||||| | ||||||||||||| ||| | |||||| | |||| | Sbjct: 88612 gtgctgcaccccagatggtgatagtccagtagccggaagtacagctagctcacgctccaa 88553 Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||| |||||||||||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct: 88552 cccaagtagcatggggcacgcaaaatcccgtgtgaatcagcgaggaccaccttgtaaggc 88493 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 88492 taaatattcctgagtgaccgatagcgaagcagtaccgtgagggaaaggtgaaaagaaccc 88433 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||||||||| |||||||| ||||||||||||||||||| || || Sbjct: 88432 ccgtcggggagtgaaatagaacatgaaaccg---cgagctcccaagcagtggga-ggaga 88377 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 | | ||||||| | |||||||||||||||||||||||||||||||| Sbjct: 88376 atgagatctct-aaccgcgtgcctgttgaagaatgagccggcgact 88332
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 494 bits (249), Expect = e-136 Identities = 271/276 (98%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 77 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 137 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgt 286 |||||||||||||||||||||||||||||||||||| Sbjct: 258 cgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 494 bits (249), Expect = e-136 Identities = 271/276 (98%), Gaps = 2/276 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 20 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 77 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 78 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 137 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 197 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 198 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 257 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgt 286 |||||||||||||||||||||||||||||||||||| Sbjct: 258 cgtgaaaacggggttgtgggagagcaatacaagcgt 293
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 468 bits (236), Expect = e-128 Identities = 335/363 (92%), Gaps = 4/363 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | | |||| |||||||||| || ||||||||||||||| Sbjct: 177053 ggtggatacctaggcacccagag-aggagg-aagggcgtagtaatcgacgaaatgcttcg 177110 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||||||||||| ||||||||||||||||||||| |||||| |||||||| |||||| Sbjct: 177111 gggagttgaaaatcagcatagatccggagattcccgaatagggcaacctttcgaactgc- 177169 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||||| |||||||||||| |||| |||||||||||| ||||||||||||||| Sbjct: 177170 tgctgaatccatgggcaggcaagagagaaccaggcgaactgaaagatcttagtagccaga 177229 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| Sbjct: 177230 ggaaaagaaagcaaaagcgattcccgtagtagcggcgggcgaaatgggagctgcctaaac 177289 Query: 251 cgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagc-ggttg 309 |||||||||||||||||||||||||||||||||||| |||| |||||||||||| | | Sbjct: 177290 cgtgaaaacggggttgtgggagagcaatacaagcgtcgtgcagctaggcgaagcagcccg 177349 Query: 310 agtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctg 369 | ||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 177350 aatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttaggctctg 177409 Query: 370 acc 372 ||| Sbjct: 177410 acc 177412 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 177411 ccgcgtgcctgttgaagaatgagccggcgactcatagg 177448 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagc 186 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagc 186 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 414 bits (209), Expect = e-112 Identities = 509/600 (84%), Gaps = 22/600 (3%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||||||| | |||||| |||||||||||| ||||| ||||||||| Sbjct: 139247 ggtggatacctaggcacccaaag-acgagg-aagggcgtagcaggcgac--aatgcttcg 139192 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 || || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 139191 ggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc 139132 Query: 131 tgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagc 186 ||||||||| | || |||||||| ||| ||||||| |||||||| | |||| Sbjct: 139131 ----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagc 139076 Query: 187 cagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcct 246 | | |||| |||| |||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 139075 cgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcct 139016 Query: 247 aaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaa 302 |||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| ||| Sbjct: 139015 aaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaa 138957 Query: 303 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 362 ||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 138956 gcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggctta 138897 Query: 363 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 422 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 138896 cgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacct 138837 Query: 423 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 482 | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 138836 cgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaa 138777 Query: 483 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 542 ||||||||||| ||| ||||||||||||| ||||||||| ||||||| |||||||| Sbjct: 138776 aagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccgagcagtgg 138720 Query: 543 gagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||| | | | ||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 138719 gaggagaattg-gatctctgacc-gcgtgcctgttgaagaatgagccggcgacttatagg 138662 Score = 414 bits (209), Expect = e-112 Identities = 509/600 (84%), Gaps = 22/600 (3%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||||||| | |||||| |||||||||||| ||||| ||||||||| Sbjct: 82630 ggtggatacctaggcacccaaag-acgagg-aagggcgtagcaggcgac--aatgcttcg 82685 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 || || | |||||||||||||||||||| ||| ||| ||| |||| || ||||||| Sbjct: 82686 ggaagccagagataagcatagatccggagatccccgaatgggttaaccccttgaactgcc 82745 Query: 131 tgctgaatccatgagcagg----caagagacaacctggcgaactgaaacatcttagtagc 186 ||||||||| | || |||||||| ||| ||||||| |||||||| | |||| Sbjct: 82746 ----gaatccatgggatgggcggcaagagacgacccggcgaaccgaaacatccaaatagc 82801 Query: 187 cagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcct 246 | | |||| |||| |||||||||||||||| |||||||||||||||| ||||| ||||| Sbjct: 82802 cgggggaagagaaggcaaaagcgattcccgcagtagcggcgagcgaagagggagtagcct 82861 Query: 247 aaaccgtgaaaacggggttgtgggagagcaatac----aagcgttgtgctgctaggcgaa 302 |||||||| ||||||||||||||||||| ||| ||| ||||||||| |||| ||| Sbjct: 82862 aaaccgtgggaacggggttgtgggagagcgataagtataag-gttgtgctgttaggtgaa 82920 Query: 303 gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagctta 362 ||||| |||| ||||| || ||| || || ||||| ||||||| ||||| ||| ||||| Sbjct: 82921 gcggtcgagtcccgcatcccagacggttagagtccggtagccggaagcagcacaggctta 82980 Query: 363 tgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacct 422 ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| Sbjct: 82981 cgctctgacccgagtagcatggggcacgtggaatcccgtgcgaatcagcgaggaccacct 83040 Query: 423 tgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaa 482 | ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 83041 cgtaaggctaaatacttctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaa 83100 Query: 483 aagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgg 542 ||||||||||| ||| ||||||||||||| ||||||||| ||||||| |||||||| Sbjct: 83101 aagaacccccatcggggagtgaaatagaacatgaaaccgta---agctcccgagcagtgg 83157 Query: 543 gagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||| | | | ||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 83158 gaggagaattg-gatctctgacc-gcgtgcctgttgaagaatgagccggcgacttatagg 83215
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 110 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 169 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 230 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 289 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 290 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 349 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 350 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 409 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 410 gcaaggaccaccttgcaag 428 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 437 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 496 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 497 ggtagtgaaatagaacgtgaaacc 520 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282 Score = 67.9 bits (34), Expect = 4e-08 Identities = 77/89 (86%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||| |||||||| | |||||| |||||| ||| |||||||||||||||| Sbjct: 3780 ggtggatacctatgcacccagag-acgagg-aagggcatagttagcgacgaaatgcttca 3723 Query: 71 gggagttgaaaataagcatagatccggag 99 | |||||| |||||||| |||||| |||| Sbjct: 3722 gagagttgcaaataagcgtagatcaggag 3694 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||| ||| ||||||||||||||| ||||||||||| Sbjct: 3243 ccgcgtacctattgaagaatgagccgacgactcatagg 3206
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 406 bits (205), Expect = e-110 Identities = 222/225 (98%), Gaps = 2/225 (0%) Strand = Plus / Plus Query: 378 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 437 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 438 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 497 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 498 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgat 557 |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgat 179 Query: 558 ctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 180 ctctga-ccgcgtgcctgttgaagaatgagccggcgactcatagg 223
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 207 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 266 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 267 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 325 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 326 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 385 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 386 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 445 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 446 gaccgata 453 |||||||| Sbjct: 241 gaccgata 248
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 389 bits (196), Expect = e-105 Identities = 246/259 (94%), Gaps = 3/259 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| |||||||||| |||||||||||||||||| Sbjct: 79748 ggtggatacctaggcacccagag-acgagg-aagggcgtagtaagcgacgaaatgcttcg 79691 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct: 79690 gggagttgaaaataagcatagatccgaggattcccgaataggtcaacctttcgaactgc- 79632 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79631 tgctgaattcacgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 79572 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 79571 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggaacagcctaaac 79512 Query: 251 cgtgaaaacggggttgtgg 269 ||||||||||||||||||| Sbjct: 79511 cgtgaaaacggggttgtgg 79493
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 385 bits (194), Expect = e-103 Identities = 312/348 (89%), Gaps = 5/348 (1%) Strand = Plus / Minus Query: 255 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 314 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 315 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 374 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 495 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 554 ||| ||||||||||||| |||||||| | ||| ||||||||||||| || ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggagaatgg 5989 Query: 555 gatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 5988 aatctctga-ccgcgtgccttttgaagaatgagccggcgacttatagg 5942 Score = 262 bits (132), Expect = 1e-66 Identities = 185/200 (92%), Gaps = 2/200 (1%) Strand = Plus / Minus Query: 54 agcgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggt 113 ||||||||||||||||||||||||| || | |||||||||||||||||||| ||||||| Sbjct: 6512 agcgacgaaatgcttcggggagttgtaattc-gcatagatccggagattcccgaataggt 6454 Query: 114 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 173 |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||||| Sbjct: 6453 taaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactgaa 6395 Query: 174 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 233 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6394 acatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcgaa 6335 Query: 234 atgggagcagcctaaaccgt 253 |||||||||||||||||||| Sbjct: 6334 atgggagcagcctaaaccgt 6315
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 383 bits (193), Expect = e-103 Identities = 207/209 (99%), Gaps = 2/209 (0%) Strand = Plus / Plus Query: 394 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 454 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 514 tgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcc 573 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtggga-ggggaaagtgatctctga-ccgcgtgcc 178 Query: 574 tgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||||||||||||| Sbjct: 179 tgttgaagaatgagccggcgactcatagg 207
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 379 bits (191), Expect = e-102 Identities = 254/272 (93%), Gaps = 6/272 (2%) Strand = Plus / Plus Query: 331 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 390 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 391 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 451 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 510 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 511 acgtgaaaccgtgctgagctcccaagcagtgggagggggaaagtgatctctgacccgcgt 570 || |||||||| | |||||||||||||||||||||| | | |||||| |||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccgggg--ctctga-ccgcgt 236 Query: 571 gcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| Sbjct: 237 gcctgttgaagaatgagccggcgactcatagg 268
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 379 bits (191), Expect = e-102 Identities = 210/214 (98%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 75788 ggtggatacctaggcacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 75845 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75846 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 75905 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75906 tgcggaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 75965 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcg 224 |||||||||||||||||||||||||||||||||| Sbjct: 75966 ggaaaagaaagcaaaagcgattcccgtagtagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 491 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggcgaactgaaacatcttag 182 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 496 gggtagtgaaatagaacgtgaaaccgt 522 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 317 bits (160), Expect = 2e-83 Identities = 392/461 (85%), Gaps = 10/461 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 ||||||||| |||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgctttggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| |||||| |||| | |||||| |||| ||||||| ||||||| ||||||||||||| Sbjct: 128 ttt--aactgc-tgcttattccatg-gcagacaagaga-aacctggtgaactgaaacatc 182 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||||||||||||||| |||||||||| |||||| |||||| ||| | |||| ||| Sbjct: 183 ttagtagccagaggaaaataaagcaaaagttattcccatagtagtggcaaatgaaaaggg 242 Query: 239 agcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctagg 298 | ||||||||| || |||| ||||||| || ||||||| ||| || || |||||| Sbjct: 243 aacagcctaaatcgctaaaatggggttgggg---agcaataaaagtattttgttgctaga 299 Query: 299 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 358 || || || |||| | | ||||||||||| | |||||||||| |||| |||| ||| Sbjct: 300 cggagtagtggagttctgaaccctagatggtgagagtccagtagtataaagtatcattag 359 Query: 359 cttatgctctga-cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggac 417 |||||||| | | ||||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 360 cttatgcttttaacccgagtagcatgggacatatggaatcccgtgtgaatcagcaaggac 419 Query: 418 caccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaag 477 ||||||| |||||||||||||| ||||||||| |||| |||||||||||||||||||| | Sbjct: 420 caccttgaaaggctaaatactcttgggtgaccaatagtgaagtagtaccgtgagggaagg 479 Query: 478 gtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 518 |||||||||||||||| |||| |||||| |||||| ||||| Sbjct: 480 gtgaaaagaacccccattggggagtgaactagaacatgaaa 520 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 568 cgtgcctgttgaagaatgagccggcgactcata 600 |||||| ||||||||||||| |||||||||||| Sbjct: 563 cgtgcccgttgaagaatgagtcggcgactcata 595
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 503 gaaatagaacgtgaaaccgtgctgagctcc 532 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 503 gaaatagaacgtgaaaccgtgctgagctcc 532 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 503 gaaatagaacgtgaaaccgtgctgagctcc 532 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 324 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 382 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 383 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 442 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 443 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 502 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 503 gaaatagaacgtgaaaccgtgctgagctcc 532 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 278 bits (140), Expect = 2e-71 Identities = 219/243 (90%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||||||||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaag-aagggcgtagcaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||| Sbjct: 81 gggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcc 140 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 200 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaac 260 Query: 251 cgt 253 ||| Sbjct: 261 cgt 263 Score = 268 bits (135), Expect = 2e-68 Identities = 211/233 (90%), Gaps = 5/233 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 566 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 567 aatggaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 618
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 274 bits (138), Expect = 3e-70 Identities = 160/165 (96%), Gaps = 2/165 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| |||||| | |||||| ||||||||||||||||||||||||||||| Sbjct: 1567 ggtggatacctaggtacccagag-acgagg-aagggcgtagcaagcgacgaaatgcttcg 1624 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1625 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttgaactgcc 1684 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 175 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1685 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 1729
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 268 bits (135), Expect = 2e-68 Identities = 217/242 (89%), Gaps = 2/242 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||||||||||||||||||||||| Sbjct: 127 ggtggatacctaggcacccagag-acgaag-aagggcgtagcaagcgacgaaatgcttcg 184 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 || || ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||| Sbjct: 185 ggaagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcc 244 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 tgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 304 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 305 ggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaac 364 Query: 251 cg 252 || Sbjct: 365 cg 366 Score = 266 bits (134), Expect = 8e-68 Identities = 210/232 (90%), Gaps = 5/232 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || || Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggaga 671 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 672 atggaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 722
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 268 bits (135), Expect = 2e-68 Identities = 211/233 (90%), Gaps = 5/233 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||| || | Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtggga-ggag 553 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || | |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 554 aatggaatctctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 605 Score = 266 bits (134), Expect = 8e-68 Identities = 217/243 (89%), Gaps = 2/243 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 || ||| |||||||||||||| | |||| | ||||||||||||||||||||||||||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaag-aagggcgtagcaagcgacgaaatgcttcg 67 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| ||| || |||||| ||||||||||| ||| |||||| ||||| || |||||| Sbjct: 68 gggagctgagaacaagcattgatccggagatgcccgaataggggaacctatttgactgcc 127 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| || | |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 tgctgaattgatagggaggcaagagacaacctggcgaactgaaacatcttagtagccaga 187 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| Sbjct: 188 ggaaaagaaagcaaaagcgattccctgagtagtggcgagcgaaatgggaacagcctaaac 247 Query: 251 cgt 253 ||| Sbjct: 248 cgt 250
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 266 bits (134), Expect = 8e-68 Identities = 234/265 (88%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | |||||||| | |||||||||||||||||| Sbjct: 23 ggtggatacctaggcacccagag-acgaag-aagggcgtggtaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 81 gggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactact 140 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 141 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 200 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 260 Query: 251 cgtgaaaacggggttgtgggagagc 275 || |||| ||||||||||||||||| Sbjct: 261 cgcgaaagcggggttgtgggagagc 285 Score = 240 bits (121), Expect = 4e-60 Identities = 266/311 (85%), Gaps = 5/311 (1%) Strand = Plus / Plus Query: 292 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 351 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 352 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 411 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 412 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 471 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 472 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 531 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 532 ccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccgg 591 |||||||||||| || ||| |||||||| ||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtggga-ggagaattcaatctctga-ccgcgtgcctgttgaagaatgagccgg 596 Query: 592 cgactcatagg 602 ||||| ||||| Sbjct: 597 cgacttatagg 607
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 266 bits (134), Expect = 8e-68 Identities = 234/265 (88%), Gaps = 2/265 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | |||||||| | |||||||||||||||||| Sbjct: 125242 ggtggatacctaggcacccagag-acgaag-aagggcgtggtaagcgacgaaatgcttcg 125185 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 125184 gggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactact 125125 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 125124 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 125065 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 125064 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 125005 Query: 251 cgtgaaaacggggttgtgggagagc 275 || |||| ||||||||||||||||| Sbjct: 125004 cgcgaaagcggggttgtgggagagc 124980 Score = 266 bits (134), Expect = 8e-68 Identities = 234/265 (88%), Gaps = 2/265 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | |||||||| | |||||||||||||||||| Sbjct: 94624 ggtggatacctaggcacccagag-acgaag-aagggcgtggtaagcgacgaaatgcttcg 94681 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||||||||||||| ||| ||| |||||| |||||| || ||| | Sbjct: 94682 gggagctgcgaacaagcatagatccgaagacccccgaatagggcaacctcttgtactact 94741 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||||||| ||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 94742 tgctgaatccataggcaagaaagagataacctggcgaactgaaacatcttagtagccaga 94801 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 94802 ggaaaagaaagcaaaagcgattccctgagtagcggcgagcgaaacgggatcagcctaaac 94861 Query: 251 cgtgaaaacggggttgtgggagagc 275 || |||| ||||||||||||||||| Sbjct: 94862 cgcgaaagcggggttgtgggagagc 94886 Score = 240 bits (121), Expect = 4e-60 Identities = 266/311 (85%), Gaps = 5/311 (1%) Strand = Plus / Minus Query: 292 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 351 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 352 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 411 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 412 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 471 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 472 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 531 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 532 ccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccgg 591 |||||||||||| || ||| |||||||| ||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtggga-ggagaattcaatctctga-ccgcgtgcctgttgaagaatgagccgg 124669 Query: 592 cgactcatagg 602 ||||| ||||| Sbjct: 124668 cgacttatagg 124658 Score = 240 bits (121), Expect = 4e-60 Identities = 266/311 (85%), Gaps = 5/311 (1%) Strand = Plus / Plus Query: 292 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 351 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 352 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 411 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 412 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 471 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 472 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 531 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 532 ccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaatgagccgg 591 |||||||||||| || ||| |||||||| ||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtggga-ggagaattcaatctctga-ccgcgtgcctgttgaagaatgagccgg 95197 Query: 592 cgactcatagg 602 ||||| ||||| Sbjct: 95198 cgacttatagg 95208
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19434055 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 19433996 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19433995 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 19433936 Query: 162 tggcgaactgaaacat 177 |||||||||||||||| Sbjct: 19433935 tggcgaactgaaacat 19433920 Score = 69.9 bits (35), Expect = 9e-09 Identities = 42/43 (97%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 546 ggggaaagtgatctctgacccgcgtgcctgttgaagaatgagc 588 |||||||||||||||||||| |||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgacc-gcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 463 taccgtgagggaaaggtgaaaagaacc 489 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51582 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 51523 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51522 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 51463 Query: 162 tggcgaactgaaacat 177 |||||||||||||||| Sbjct: 51462 tggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Minus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119546 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 119487 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 119486 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 119427 Query: 162 tggcgaactgaaacat 177 |||||||||||||||| Sbjct: 119426 tggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 262 bits (132), Expect = 1e-66 Identities = 135/136 (99%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6076 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 6135 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 6136 tcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaacc 6195 Query: 162 tggcgaactgaaacat 177 |||||||||||||||| Sbjct: 6196 tggcgaactgaaacat 6211
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 260 bits (131), Expect = 5e-66 Identities = 226/255 (88%), Gaps = 7/255 (2%) Strand = Plus / Plus Query: 346 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 405 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 406 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 465 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 466 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 525 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 526 gagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaatg 585 |||| ||||||||||||||| | | | ||||||| |||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagcca---gggctctgac-cgcgtgcctgttgaagaatg 605 Query: 586 agccggcgactcata 600 ||||||||||||||| Sbjct: 606 agccggcgactcata 620 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 145 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 204 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 205 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 264 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 265 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 324 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 325 a 325 | Sbjct: 325 a 325
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 256 bits (129), Expect = 7e-65 Identities = 205/227 (90%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| | Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 | || |||||||| |||||||||||||||||||||||||||||||| Sbjct: 514 atag-aatctctga-ccgcgtgcctgttgaagaatgagccggcgact 558 Score = 182 bits (92), Expect = 9e-43 Identities = 184/211 (87%), Gaps = 4/211 (1%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgct-tcggggagttgaaaataagcatagatccggaga 100 ||||||||| |||||||||||||||| |||| |||| || |||| || |||||||||| Sbjct: 8 aagggcgtaacaagcgacgaaatgctctcggagagtcgagaataggct--gatccggaga 65 Query: 101 ttcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaac 160 | ||| |||||| ||||| |||||||| |||||||| || |||| | ||||| ||| Sbjct: 66 tccccgaatagggtaacctaataaactgc-tgctgaatatataggcagacgagagataac 124 Query: 161 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagt 220 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 125 ctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctcagt 184 Query: 221 agcggcgagcgaaatgggagcagcctaaacc 251 || |||||||||||||||| ||||||||||| Sbjct: 185 agtggcgagcgaaatgggaacagcctaaacc 215
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 207/232 (89%), Gaps = 5/232 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 553 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 554 ttttgatctctga-ccgcgtgcctattgaagaatgagccggcgacttatagg 604 Score = 163 bits (82), Expect = 8e-37 Identities = 178/210 (84%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 ||||||||| || |||||||| ||| |||| || ||| || |||||| ||||||||||| Sbjct: 39 aagggcgtactaatcgacgaaacgctccgggaagctgacaagaagcattgatccggagat 98 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 ||| |||||| |||||| || |||| | ||||||| || || | |||||||||| Sbjct: 99 ccccgaatagggcaacctcttgaactctccgctgaataaataggcggagcagagacaacc 158 Query: 162 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 221 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 159 tggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccttagta 218 Query: 222 gcggcgagcgaaatgggagcagcctaaacc 251 ||||||||||||| |||| ||| ||||||| Sbjct: 219 gcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 242 bits (122), Expect = 1e-60 Identities = 207/232 (89%), Gaps = 5/232 (2%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 115109 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 115108 ttttgatctctga-ccgcgtgcctattgaagaatgagccggcgacttatagg 115058 Score = 242 bits (122), Expect = 1e-60 Identities = 207/232 (89%), Gaps = 5/232 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||||||||| |||||||| | |||| |||||||||||||| || Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccg---taagcttacaagcagtgggaggagg- 86879 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 86880 ttttgatctctga-ccgcgtgcctattgaagaatgagccggcgacttatagg 86930 Score = 170 bits (86), Expect = 3e-39 Identities = 204/241 (84%), Gaps = 2/241 (0%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| |||| | |||| | ||||||||| || |||||||| ||| || Sbjct: 115653 ggtggatacctaggcatccagag-acgacg-aagggcgtactaatcgacgaaacgctccg 115596 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 || || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 115595 ggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctc 115536 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||| || || | ||||||||||||| ||| ||||||||||||||||||||| Sbjct: 115535 cgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccaga 115476 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||| Sbjct: 115475 ggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaac 115416 Query: 251 c 251 | Sbjct: 115415 c 115415 Score = 170 bits (86), Expect = 3e-39 Identities = 204/241 (84%), Gaps = 2/241 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| |||| | |||| | ||||||||| || |||||||| ||| || Sbjct: 86335 ggtggatacctaggcatccagag-acgacg-aagggcgtactaatcgacgaaacgctccg 86392 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 || || ||| || |||||| ||||||||||| ||| |||||| |||||| || |||| | Sbjct: 86393 ggaagctgacaagaagcattgatccggagatccccgaatagggcaacctcttgaactctc 86452 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||| || || | ||||||||||||| ||| ||||||||||||||||||||| Sbjct: 86453 cgctgaataaataggcggagcagagacaacctggtgaattgaaacatcttagtagccaga 86512 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| |||||||||||||||||| |||| ||| |||||| Sbjct: 86513 ggaaaagaaagcaaaagcgattcccttagtagcggcgagcgaaaggggaacagtctaaac 86572 Query: 251 c 251 | Sbjct: 86573 c 86573
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 299 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 358 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 359 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 418 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 419 accttgcaaggctaaatactcctgggtgaccga 451 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 240 bits (121), Expect = 4e-60 Identities = 181/196 (92%), Gaps = 4/196 (2%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaa-tgcttc 69 |||||||||| |||||||||| | |||||| ||| |||||| ||||||||||| |||||| Sbjct: 89860 ggtggataccaaggcacccagag-acgagg-aagagcgtagtaagcgacgaaaatgcttc 89803 Query: 70 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 129 |||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 89802 ggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc 89743 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 89742 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 89684 Query: 190 aggaaaagaaagcaaa 205 |||||||||||||||| Sbjct: 89683 aggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 240 bits (121), Expect = 4e-60 Identities = 181/196 (92%), Gaps = 4/196 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaa-tgcttc 69 |||||||||| |||||||||| | |||||| ||| |||||| ||||||||||| |||||| Sbjct: 410 ggtggataccaaggcacccagag-acgagg-aagagcgtagtaagcgacgaaaatgcttc 467 Query: 70 ggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgc 129 |||||||||||||||||| |||||||||||||||| ||||||| |||||||| |||||| Sbjct: 468 ggggagttgaaaataagcgtagatccggagattccggaataggttaaccttttgaactgc 527 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 528 -tgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttactagccag 586 Query: 190 aggaaaagaaagcaaa 205 |||||||||||||||| Sbjct: 587 aggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 445 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 238 bits (120), Expect = 2e-59 Identities = 207/232 (89%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || | ||| |||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtgggaggaaga 547 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | ||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 548 a---gat-tctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 594 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 211 ttcccgtagtagcggcgagcgaa 233 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 318 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 377 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 378 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 437 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 438 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 497 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 498 gtagtgaaatagaacgtgaaa 518 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 172 bits (87), Expect = 9e-40 Identities = 180/207 (86%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||| Sbjct: 68 gaaatgcttcggggagttaaaaataaacatagatccggagattcccgaataggtaaacct 127 Query: 120 tttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatct 179 || |||||| ||||| | |||||| |||| ||| ||| ||||||| |||||||| ||||| Sbjct: 128 ttaaaactg-ctgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcatct 184 Query: 180 tagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggga 239 |||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| |||| Sbjct: 185 tagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaaggga 244 Query: 240 gcagcctaaaccgtgaaaacggggttg 266 |||||||||||| |||| ||||||| Sbjct: 245 acagcctaaaccgctaaaatggggttg 271 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 567 gcgtgcctgttgaagaatgagccggcgactcata 600 |||| ||||||||||||||||||||||||||||| Sbjct: 574 gcgttcctgttgaagaatgagccggcgactcata 607
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 230 bits (116), Expect = 4e-57 Identities = 206/232 (88%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| ||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga---gga 583 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 || ||| ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 584 aatagat-tctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 633 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 226 bits (114), Expect = 7e-56 Identities = 134/138 (97%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 465 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 524 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 525 tgagctcccaagcagtgggagggggaaagtgatctctgacccgcgtgcctgttgaagaat 584 ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtggga-ggggaaagtgatctctga-ccgcgtgcctgttgaagaat 107933 Query: 585 gagccggcgactcatagg 602 |||||||||||||||||| Sbjct: 107932 gagccggcgactcatagg 107915
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 224 bits (113), Expect = 3e-55 Identities = 204/232 (87%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| | |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 575 aag----ccctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 621 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249 Score = 71.9 bits (36), Expect = 2e-09 Identities = 92/109 (84%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 || ||| |||||||||||||| | |||| | |||||||||| || |||||||| |||||| Sbjct: 10 ggyggagacctaggcacccagag-acgatg-aagggcgtagtaaccgacgaaacgcttcg 67 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 68 gggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 116
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 224 bits (113), Expect = 3e-55 Identities = 204/232 (87%), Gaps = 8/232 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| | |||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 2344 aag----ccctga-ccgcgtgcctgttgaagaatgagccggcgacttatagg 2390 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015 Score = 83.8 bits (42), Expect = 6e-13 Identities = 94/109 (86%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | |||||||||| || |||||||| |||||| Sbjct: 1776 ggtggatacctaggcacccagag-acgatg-aagggcgtagtaaccgacgaaacgcttcg 1833 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||| || ||| |||| | |||||| |||||||| |||||| |||||| Sbjct: 1834 gggagctggaaacaagctttgatccgtagattcccgaatagggcaacct 1882
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 513 gtgaaa 518 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 547 ccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 568 cgtgcctgttgaagaatgagccggcgactcata 600 ||||| || |||||||||||||||| ||||||| Sbjct: 551 cgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 ag 240 || Sbjct: 245 ag 246 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 513 gtgaaa 518 ||||| Sbjct: 503 atgaaa 508 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 547 ccgcgtgcgtgctgaagaatgagccggcaactcata 582
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 155 bits (78), Expect = 2e-34 Identities = 166/190 (87%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| |||||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 165/190 (86%), Gaps = 4/190 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 agcagcctaa 248 | || ||||| Sbjct: 245 aacaacctaa 254 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 214 bits (108), Expect = 3e-52 Identities = 226/263 (85%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| |||| | |||| | |||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaag-aagggcgtagtaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| || Sbjct: 81 gggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacc 140 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 || ||| ||| | |||| ||||| ||||| | ||||||||||||||||||||| ||| Sbjct: 141 tgtaaaatacataatcaggttagagaaaacctagtgaactgaaacatcttagtagctaga 200 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||| Sbjct: 201 ggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaac 260 Query: 251 cgtgaaaacggggttgtgggaga 273 ||||||| ||||||||||||||| Sbjct: 261 cgtgaaagcggggttgtgggaga 283 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 495 tgggtagtgaaatagaacgtgaaacc 520 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 570 ccgcgtgcctgttgaagaatgagccggcgacttatagg 607
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 214 bits (108), Expect = 3e-52 Identities = 209/239 (87%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| || ||| | |||| | |||||||||| |||||||||||||||||| Sbjct: 4056 ggtggatacctaggtactcagag-acgaag-aagggcgtagtaagcgacgaaatgcttcg 4113 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 4114 gggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc 4173 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||| || | |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 4174 -gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccaga 4232 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 4233 ggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 4291 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 496 gggtagtgaaatagaacgtgaaaccgt 522 ||| ||||||| ||||| ||||||||| Sbjct: 4550 ggggagtgaaagagaacatgaaaccgt 4576 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 4614 ccgcgtgcctgttgaagaatgagccggcgactcatagg 4651
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 214 bits (108), Expect = 3e-52 Identities = 209/239 (87%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| || ||| | |||| | |||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaag-aagggcgtagtaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 81 gggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc 140 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||||||| || | |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 141 -gctgaatccataggcggataagagagaacctggtgaactgaaacatcttagtagccaga 199 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 200 ggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 496 gggtagtgaaatagaacgtgaaaccgt 522 ||| ||||||| ||||| ||||||||| Sbjct: 517 ggggagtgaaagagaacatgaaaccgt 543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgactcatagg 618
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccg 521 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 151 bits (76), Expect = 3e-33 Identities = 166/196 (84%) Strand = Plus / Plus Query: 56 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 115 |||||||| ||||||||||| || ||||||| | |||||| |||| ||| |||||| || Sbjct: 45 cgacgaaacgcttcggggagctggcaataagcgttgatccgaagatccccgaatagggca 104 Query: 116 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 175 |||| |||| ||| | ||| ||| || |||||||||| |||| || |||||||||| Sbjct: 105 acctcaagaactacctccctaattcataaggaggcaagagagaacccggtgaactgaaac 164 Query: 176 atcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaat 235 |||| ||||||| ||||||||||||||||| ||||||||| |||||||||||||||||| Sbjct: 165 atctaagtagccggaggaaaagaaagcaaacgcgattcccatagtagcggcgagcgaaaa 224 Query: 236 gggagcagcctaaacc 251 |||| ||||||||||| Sbjct: 225 gggaacagcctaaacc 240 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 800 ccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 333 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 392 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 393 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 452 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 453 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 512 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 513 gtgaaa 518 ||||| Sbjct: 504 atgaaa 509 Score = 147 bits (74), Expect = 5e-32 Identities = 159/182 (87%), Gaps = 4/182 (2%) Strand = Plus / Plus Query: 60 gaaatgcttcggggagttgaaaa-taagcatagatccggagattcccaaataggtcaacc 118 |||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||| |||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggagattcccgaataggtaaacc 127 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 ||| ||||||| |||| | |||||| | || ||||||| |||| || ||||||||||||| Sbjct: 128 tttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacatc 184 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| ||| Sbjct: 185 ttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaaggg 244 Query: 239 ag 240 || Sbjct: 245 ag 246 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcata 600 |||||||| || |||||||||||||||| ||||||| Sbjct: 548 ccgcgtgcgtgctgaagaatgagccggcaactcata 583
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 210 bits (106), Expect = 4e-51 Identities = 198/226 (87%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 ||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 551 -cctgagccctga-ccgcgtgcctgttgaagaatgagccggcgact 594 Score = 149 bits (75), Expect = 1e-32 Identities = 202/242 (83%), Gaps = 2/242 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||||| || | |||| | |||||||| | | |||||| | ||| || Sbjct: 10 ggtggatacctaggcacctagag-acgaag-aagggcgtcactaccgacgatacgctccg 67 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||||| | ||||||||||||||| ||| || |||||| ||| || Sbjct: 68 gggagctggaagtaagcttcgatccggagattcccgaatggggcaacctcaaggactccc 127 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| || Sbjct: 128 tgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccgga 187 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||||| Sbjct: 188 ggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaaac 247 Query: 251 cg 252 || Sbjct: 248 cg 249
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 147 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 206 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 207 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 251 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 899 ccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 230 cgaaatgggagcagcctaaacc 251 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 590 ccgcgtgcctgttgaagaatgagccggcgact 621
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 206 bits (104), Expect = 6e-50 Identities = 208/239 (87%), Gaps = 3/239 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| || ||| | |||| | |||||||||| |||||||||||||||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaag-aagggcgtagtaagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 |||||| ||||| | |||||||||||||||||||| ||| || |||| || |||||| Sbjct: 81 gggagtcgaaaacaggcatagatccggagattcccgaatggggtaaccccttgtactgcc 140 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 ||||||| ||| || | |||||| ||||||| ||||||||||||||||||||||||| Sbjct: 141 -gctgaatacataggcggataagagagaacctggtgaactgaaacatcttagtagccaga 199 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 |||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct: 200 ggaaaaaaaagcaaaagcgattccctgagtagcggcgagcgaaatgggagaagcctaaa 258 Score = 196 bits (99), Expect = 6e-47 Identities = 180/207 (86%) Strand = Plus / Plus Query: 316 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 375 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 376 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 435 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 436 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 495 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 496 gggtagtgaaatagaacgtgaaaccgt 522 ||| ||||||| ||||| ||||||||| Sbjct: 517 ggggagtgaaagagaacatgaaaccgt 543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgactcatagg 618
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 1e-48 Identities = 117/122 (95%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 490 cc 491 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 149 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 208 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 209 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 564 ccgcgtgcctgttgaagaatgagccggcgacttatagg 601 Score = 56.0 bits (28), Expect = 1e-04 Identities = 77/91 (84%), Gaps = 2/91 (2%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| | || | |||||| |||||||| | | ||||||||||||||| Sbjct: 23 ggtggatacctaggcatctagag-acgagg-aagggcgtggttaccgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagat 101 |||||||| ||| | || |||||||||||| Sbjct: 81 gggagttggaaagaggctgagatccggagat 111
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 1e-48 Identities = 135/146 (92%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 495 tgggtagtgaaatagaacgtgaaacc 520 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 178 bits (90), Expect = 1e-41 Identities = 220/261 (84%), Gaps = 2/261 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| |||| | |||| | |||||||||| |||||||||||||||||| Sbjct: 1790 ggtggatacctaggcatccagag-acgaag-aagggcgtagtaagcgacgaaatgcttcg 1847 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||| ||| ||||| |||||||| |||||| ||||| || ||| || Sbjct: 1848 gggagctgcgaacaagtataaatccgaagattcccgaatagggtaacctcttgtactacc 1907 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 || |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||| Sbjct: 1908 tgtataatcaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctaga 1967 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| | |||||||||||||||||| |||||| ||||||||||| |||| | |||||||| Sbjct: 1968 ggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaaccgcctaaac 2027 Query: 251 cgtgaaaacggggttgtggga 271 ||| ||| ||||||||||||| Sbjct: 2028 cgttaaagcggggttgtggga 2048
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 230 cgaaatgggagcagcctaaacc 251 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 749 ccgcgtgcctgttgaagaatgagccggcgacttatagg 786
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 226 cgagcgaaatgggagcagcctaaac 250 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 584 ccgcgtgcctgttgaagaatgagccggcgacttatagg 621 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 638 ccgcgtgcctgttgaagaatgagccggcgacttatagg 675 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 170 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 229 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 230 cgaaatgggagcagcctaaacc 251 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 597 ccgcgtgcctgttgaagaatgagccggcgact 628
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 151803 ccgcgtgcctgttgaagaatgagccggcgacttatagg 151766 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 42400 ccgcgtgcctgttgaagaatgagccggcgacttatagg 42437
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 198 bits (100), Expect = 1e-47 Identities = 224/263 (85%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| |||| | |||| | |||||||||| |||||||||||||||| | Sbjct: 3057 ggtggatacctaggcatccagag-acgaag-aagggcgtagtaagcgacgaaatgctttg 3114 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||| ||||||||| |||||||| |||||| |||||| || ||| || Sbjct: 3115 gggagctgcgaacaagtatagatccgaagattcccgaatagggcaacctcttgtactacc 3174 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 || ||| ||| |||| ||||| ||||| | ||||||||||||||||||||| ||| Sbjct: 3175 tgtaaaatacatagtcaggttagagaaaacctagtgaactgaaacatcttagtagctaga 3234 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 |||| | |||||||||||||||||| |||||| ||||||||||| |||| |||||||||| Sbjct: 3235 ggaataaaaagcaaaagcgattcccttagtagtggcgagcgaaacgggaacagcctaaac 3294 Query: 251 cgtgaaaacggggttgtgggaga 273 ||||||| ||||||||||||||| Sbjct: 3295 cgtgaaagcggggttgtgggaga 3317 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 495 tgggtagtgaaatagaacgtgaaacc 520 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 3604 ccgcgtgcctgttgaagaatgagccggcgacttatagg 3641
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 638 ccgcgtgcctgttgaagaatgagccggcgacttatagg 675 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 127
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 226 cgagcgaaatgggagcagcctaaac 250 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 584 ccgcgtgcctgttgaagaatgagccggcgacttatagg 621 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||| | |||||| ||||||||||||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagctttgatccgaagattcccaaatagggcaacct 127
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 572 ccgcgtgcctgttgaagaatgagccggcgacttatagg 609
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 657 ccgcgtgcctgttgaagaatgagccggcgacttatagg 694
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 194 bits (98), Expect = 2e-46 Identities = 196/226 (86%), Gaps = 7/226 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggga 550 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga---gga 690 Query: 551 aagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 ||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 691 ttttgaaatctga-ccgcgtgcctgttgaagaatgagccggcgact 735 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatggga 239 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 491 ccagtgggtagtgaaatagaacgtgaaacc 520 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 69.9 bits (35), Expect = 9e-09 Identities = 87/102 (85%), Gaps = 2/102 (1%) Strand = Plus / Plus Query: 18 acctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcggggagtt 77 |||||||||||||| | |||| | |||||||| | || |||||||| ||||||||||| | Sbjct: 9 acctaggcacccagag-acgatg-aagggcgtggaaaccgacgaaacgcttcggggagct 66 Query: 78 gaaaataagcatagatccggagattcccaaataggtcaacct 119 | ||| ||||| ||||||||||||||| |||||| |||||| Sbjct: 67 ggaaacaagcaatgatccggagattcccgaatagggcaacct 108 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 558 ccgcgtgcctgttgaagaatgagccggcgact 589
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 365 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 424 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 425 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 484 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 485 gaacccccagtgggtagtgaaataga 510 ||||||||| |||| ||||||||||| Sbjct: 458 gaacccccactggggagtgaaataga 483 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 158 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 217 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 218 agtagcggcgagcgaaatgggagcagcctaaacc 251 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 533 ccgcgtgcctgttgaagaatgagccggcgacttatagg 570 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgcttcgg 71 |||||||||| ||||||||||| ||||||| Sbjct: 13 aagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 194 bits (98), Expect = 2e-46 Identities = 222/261 (85%), Gaps = 2/261 (0%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||||| |||| | |||| | |||||||||| ||||||||||||||||| Sbjct: 23 ggtggatacctaggcatccagag-acgaag-aagggcgtagtcagcgacgaaatgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| || || ||||||| ||||| |||||||| |||||| ||||| || ||| || Sbjct: 81 gggagctgcgaacaagcataaatccgaagattcccgaatagggtaacctcttgtactacc 140 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 || |||| || | |||| ||||| ||||| | ||||||||||||||||||||| ||| Sbjct: 141 tgtagaattaataatcaggttagagaaaacctagtgaactgaaacatcttagtagctaga 200 Query: 191 ggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaac 250 ||||||||||||||||||||||||| ||||| ||||||||||| |||| |||||||||| Sbjct: 201 ggaaaagaaagcaaaagcgattccctcagtagtggcgagcgaaacgggaacagcctaaac 260 Query: 251 cgtgaaaacggggttgtggga 271 || |||| ||||||||||||| Sbjct: 261 cgcgaaagcggggttgtggga 281 Score = 186 bits (94), Expect = 6e-44 Identities = 197/228 (86%), Gaps = 5/228 (2%) Strand = Plus / Plus Query: 375 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 434 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 435 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 494 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 495 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggggaaagt 554 ||| ||||||||||||| ||||||| | |||| |||||||||||||| ||| | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattg- 560 Query: 555 gatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 | || |||| ||||||||||||||||||||||||||||||| ||||| Sbjct: 561 aacctttgac-cgcgtgcctgttgaagaatgagccggcgacttatagg 607
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 491 ccagtgggtagtgaaatagaacgtgaaacc 520 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 25367 ccgcgtgcctgttgaagaatgagccggcgact 25398 Score = 63.9 bits (32), Expect = 6e-07 Identities = 56/64 (87%) Strand = Plus / Plus Query: 56 cgacgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtca 115 |||||||| ||||||||||| || ||| ||||| ||||||||||||||| |||||| || Sbjct: 24854 cgacgaaacgcttcggggagctggaaacaagcaatgatccggagattcccgaatagggca 24913 Query: 116 acct 119 |||| Sbjct: 24914 acct 24917
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 493 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 494 gtgggtagtgaaatagaacgtgaaaccgt 522 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgacttatagg 618 Score = 46.1 bits (23), Expect = 0.13 Identities = 47/55 (85%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| Sbjct: 55 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacct 109
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 63.9 bits (32), Expect = 6e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 567 gcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||| ||||| Sbjct: 591 gcgtgcctgttgaagaatgagccggcgacttatagg 626
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 188 bits (95), Expect = 1e-44 Identities = 158/177 (89%), Gaps = 4/177 (2%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 489 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtgggagg 528 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaac 250 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactc 597 ||||||||||||||||||||||||||||||||| Sbjct: 543 ccgcgtgcctgttgaagaatgagccggcgactc 575
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 188 bits (95), Expect = 1e-44 Identities = 143/159 (89%) Strand = Plus / Plus Query: 364 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 423 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 424 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 483 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 484 agaacccccagtgggtagtgaaatagaacgtgaaaccgt 522 |||||||||| ||| ||||||| ||||| ||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccgt 538 Score = 184 bits (93), Expect = 2e-43 Identities = 207/240 (86%), Gaps = 4/240 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 |||||||||||||| || ||| | |||| | |||||||||| ||||||||||| |||||| Sbjct: 23 ggtggatacctaggtactcagag-acgaag-aagggcgtagtaagcgacgaaacgcttcg 80 Query: 71 gggagttgaaaataagcatagatccggagattcccaaat-aggtcaaccttttaaactgc 129 |||||| ||||| | | ||||||||||||||||| ||| ||| | || ||| ||||| Sbjct: 81 gggagtcgaaaacagacgtagatccggagattcccgaatggggtaacccctttgtactgc 140 Query: 130 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 189 | ||||||| ||| ||| | |||||||||||||| ||||||||||||||||||| |||| Sbjct: 141 c-gctgaattcataagcggataagagacaacctggtgaactgaaacatcttagtaaccag 199 Query: 190 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| Sbjct: 200 aggaaaagaaagcaaaagcgatttcctgagtagcggcgagcgaaatgggagaagcctaaa 259 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatag 601 ||||||||||||||||||||||||||||||||||||| Sbjct: 576 ccgcgtgcctgttgaagaatgagccggcgactcatag 612
>gb|AF482503.1| Chlorokybus atmophyticus 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast genes for chloroplast products Length = 906 Score = 186 bits (94), Expect = 6e-44 Identities = 164/185 (88%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||| || |||||||| |||||| Sbjct: 724 ggtggatacctaggcacccagag-acgaag-aagggcgtactaaccgacgaaacgcttcg 781 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaaactgcc 130 ||||| |||||| |||||| ||||||||||||||| |||||| |||||| || |||| || Sbjct: 782 gggagctgaaaagaagcattgatccggagattcccgaatagggcaacctcttgaacttcc 841 Query: 131 tgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccaga 190 |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 842 tgctgaattcataggcaggatagagacaacctggcgaactgaaacatcttagtagccaga 901 Query: 191 ggaaa 195 ||||| Sbjct: 902 ggaaa 906
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 67.9 bits (34), Expect = 4e-08 Identities = 92/109 (84%), Gaps = 2/109 (1%) Strand = Plus / Minus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||||||| |||||||| || || Sbjct: 171496 ggtggatacctaggcacccagag-acgaag-aagggcgtagcaaccgacgaaaccctccg 171439 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 171438 gggagctggaagcaagctctgatccggagattcccgaatagggcaacct 171390 Score = 67.9 bits (34), Expect = 4e-08 Identities = 92/109 (84%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||||||| |||||||| || || Sbjct: 121430 ggtggatacctaggcacccagag-acgaag-aagggcgtagcaaccgacgaaaccctccg 121487 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 121488 gggagctggaagcaagctctgatccggagattcccgaatagggcaacct 121536 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 170937 ccgcgtgcctgttgaagaatgagccggcgact 170906 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 121989 ccgcgtgcctgttgaagaatgagccggcgact 122020
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 186 bits (94), Expect = 6e-44 Identities = 200/227 (88%), Gaps = 10/227 (4%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 ||| || || ||||||||||||| ||||||||| | ||| ||||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggg 616 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 ||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 617 --tttga-ccctga-ccgcgtgcctgttgaagaatgagccggcgact 659 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 546 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 92/109 (84%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 ||||||||||||||||||||| | |||| | ||||||||||||| |||||||| || || Sbjct: 21 ggtggatacctaggcacccagag-acgaag-aagggcgtagcaaccgacgaaaccctccg 78 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||| || || |||| ||||||||||||||| |||||| |||||| Sbjct: 79 gggagctggaagcaagctctgatccggagattcccgaatagggcaacct 127 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 580 ccgcgtgcctgttgaagaatgagccggcgact 611
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 184 bits (93), Expect = 2e-43 Identities = 196/227 (86%), Gaps = 5/227 (2%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggg 549 |||| ||| ||||||||||| |||||||| | |||| |||||||||||| | | Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtggga-gaag 959 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgact 596 || | |||| ||| |||||||||||||||||||||||||||||||| Sbjct: 960 aatctaatctttga-ccgcgtgcctgttgaagaatgagccggcgact 1005 Score = 168 bits (85), Expect = 1e-38 Identities = 182/212 (85%), Gaps = 3/212 (1%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||| ||||||||||||||||||| | || || ||| || | |||||||| Sbjct: 455 aagggcgtagaaagcgacgaaatgcttcggttaactgcgaacaag--taaacccggagat 512 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 |||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||||| Sbjct: 513 tcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaacc 571 Query: 162 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 221 ||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||| Sbjct: 572 tggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttagta 631 Query: 222 gcggcgagcgaaatgggagcagcctaaaccgt 253 | ||||||||||| |||| ||||||||||||| Sbjct: 632 gtggcgagcgaaacgggaacagcctaaaccgt 663
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 489 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 490 cccagtgggtagtgaaatagaacgtgaaaccgt 522 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||||||||||||||||||||||||||||| Sbjct: 633 ccgcgtgcctgttgaagaatgagccggcgact 664
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 157 bits (79), Expect = 5e-35 Identities = 178/211 (84%) Strand = Plus / Plus Query: 42 aagggcgtagcaagcgacgaaatgcttcggggagttgaaaataagcatagatccggagat 101 |||||||||| | |||||| | ||||||||||| || || |||| | |||||| |||| Sbjct: 39 aagggcgtagttaccgacgatacgcttcggggagctggaatcaagctttgatccgaagat 98 Query: 102 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 161 |||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||||| Sbjct: 99 tcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaacc 158 Query: 162 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 221 |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||||| Sbjct: 159 cggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttagta 218 Query: 222 gcggcgagcgaaatgggagcagcctaaaccg 252 | ||||||||||| |||| ||| |||||||| Sbjct: 219 gtggcgagcgaaaagggatcagtctaaaccg 249 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 561 ccgcgtgcctgttgaagaatgagccggcgacttatagg 598
>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2888 Score = 180 bits (91), Expect = 4e-42 Identities = 201/234 (85%), Gaps = 9/234 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 425 cccgagtagcatgggacacgtggaatcccgtgtgaatccgcgaggaccacctcgtaaggc 484 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||| ||| ||||||| ||||||| |||||||||||||| Sbjct: 485 taaatactcctgagtgaccgatagagaaagagtaccgcgagggaacggtgaaaagaaccc 544 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 548 | |||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 545 ctgttggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggca 599 Query: 549 gaaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| || | |||||| |||||||| ||||||||||||||||||||| ||||| Sbjct: 600 aaaaaagagc-ctgacc-gcgtgcctattgaagaatgagccggcgacttatagg 651 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 158 gaactgaaacatctaagtagccggaggaaaagaaagcaaacgcgattcccgtagtagcgg 217 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| |||||||||| Sbjct: 218 cgagcgaaccgggaagagcctaaacc 243
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 491 ccagtgggtagtgaaatagaacgtgaaacc 520 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 124 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 125 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 184 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 185 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 244 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 245 ctaaacc 251 ||||||| Sbjct: 253 ctaaacc 259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 586 ccgcgtgcctgttgaagaatgagccggcgacttatagg 623
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 491 ccagtgggtagtgaaatagaacgtgaaacc 520 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||||| |||||||||||||| |||||||||| Sbjct: 430 ccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 491 ccagtgggtagtgaaatagaacgtgaaacc 520 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/187 (81%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaaccttttaa 124 ||||||||||| || || |||| | ||||||||||||||| |||||| |||||| | || Sbjct: 73 gcttcggggagctggcaacaagctttgatccggagattcccgaatagggcaacctataaa 132 Query: 125 actgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagta 184 ||| ||| ||| ||| ||| ||||| ||||| | |||||||||||||| |||| Sbjct: 133 actacctatataattcatagttaggaaagaggcaacccagtgaactgaaacatctaagta 192 Query: 185 gccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagc 244 || ||||||||||||||||| |||||||||||||||| ||||| |||| |||| ||| Sbjct: 193 gctggaggaaaagaaagcaaacgcgattcccgtagtagtggcgaacgaaccgggattagc 252 Query: 245 ctaaacc 251 ||||||| Sbjct: 253 ctaaacc 259 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 586 ccgcgtgcctgttgaagaatgagccggcgacttatagg 623
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 374 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 433 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 434 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 493 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 494 gtgggtagtgaaatagaacgtgaaaccgt 522 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcga 594 |||||||||||||||||||||||||| Sbjct: 191 gtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 491 ccagt-gggtagtgaaatagaacgtgaaaccgt 522 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 151 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 210 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 211 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 252 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgact 596 |||| ||||||||||||||||||||||||||| Sbjct: 717 ccgcatgcctgttgaagaatgagccggcgact 748 Score = 48.1 bits (24), Expect = 0.034 Identities = 89/109 (81%), Gaps = 2/109 (1%) Strand = Plus / Plus Query: 11 ggtggatacctaggcacccagngnacgaggnaagggcgtagcaagcgacgaaatgcttcg 70 || ||| |||||||||||||| | |||| | |||||||| | || |||||||| |||||| Sbjct: 10 ggyggagacctaggcacccagag-acgaag-aagggcgtggaaaccgacgaaacgcttcg 67 Query: 71 gggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 || || || ||| |||| |||||| |||||||| |||||| |||||| Sbjct: 68 ggaagctggaaacaagctatgatccgaagattcccgaatagggcaacct 116
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 176 bits (89), Expect = 5e-41 Identities = 200/233 (85%), Gaps = 8/233 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 549 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| || |||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 564 aaa---atgcctga-ccgcgtgcctattgaagaatgagccggcgacttatagg 612 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 167 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 226 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 227 gagcgaaatgggagcagcctaaacc 251 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttatagg 458
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttatagg 458
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttatagg 458
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttatagg 458
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtg 523 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 1e-11 Identities = 76/88 (86%) Strand = Plus / Plus Query: 164 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 223 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 224 ggcgagcgaaatgggagcagcctaaacc 251 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||| ||||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttatagg 458
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 490 c 490 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 555 ccgcgtgcctgttgaagaatgagccggcgactcatagg 592 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 293 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 342 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 437 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 438 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 497 Query: 490 c 490 | Sbjct: 498 c 498 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 163 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 222 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||| |||| |||||||||||| Sbjct: 223 cagtagcggcgagcgaagagggaacagcctaaaccg 258 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 568 ccgcgtgcctgttgaagaatgagccggcgactcatagg 605 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 293 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 342 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 300 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 349
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 370 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 429 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 4952 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 5011 Query: 430 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 489 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 5012 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 5071 Query: 490 c 490 | Sbjct: 5072 c 5072 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 157 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 216 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 4737 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 4796 Query: 217 tagtagcggcgagcgaaatgggagcagcctaaaccg 252 |||||||||||||||| |||| |||||||||||| Sbjct: 4797 cagtagcggcgagcgaagagggaacagcctaaaccg 4832 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||||||||| Sbjct: 5142 ccgcgtgcctgttgaagaatgagccggcgactcatagg 5179 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 293 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 342 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 4874 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 4923
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 176 bits (89), Expect = 5e-41 Identities = 200/233 (85%), Gaps = 8/233 (3%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-gg 549 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 550 aaagtgatctctgacccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||| || |||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 564 aaa---atgcctga-ccgcgtgcctattgaagaatgagccggcgacttatagg 612 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 136865 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 136924 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 136925 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 136983 Query: 490 cccagt-gggtagtgaaatagaacgtgaaacc 520 |||||| ||| |||| |||||||| ||||||| Sbjct: 136984 cccagtaggggagtgcaatagaacatgaaacc 137015 Score = 174 bits (88), Expect = 2e-40 Identities = 139/152 (91%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||| Sbjct: 48679 cccgagtagcatggggcacgtggaaccccgtgtgaatcagcgaggaccacctcgtaaggc 48620 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 489 ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| | Sbjct: 48619 taaatactcttgggtgaccgatagtgaaatagtaccgtgagggaaaggtgaaatagaa-c 48561 Query: 490 cccagt-gggtagtgaaatagaacgtgaaacc 520 |||||| ||| |||| |||||||| ||||||| Sbjct: 48560 cccagtaggggagtgcaatagaacatgaaacc 48529 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 59 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 118 ||||| |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| Sbjct: 136542 cgaaacgcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaacc 136601 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 |||||||| || |||||| ||| | ||||||| |||| | ||||||||||||| Sbjct: 136602 ctttaaactaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatc 136661 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 136662 ttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtggg 136721 Query: 239 agcagcctaaaccg 252 | |||||||||||| Sbjct: 136722 aacagcctaaaccg 136735 Score = 123 bits (62), Expect = 7e-25 Identities = 161/194 (82%) Strand = Plus / Minus Query: 59 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 118 ||||| |||||||||||||| ||| | || | |||||| |||| ||| ||| || ||||| Sbjct: 49002 cgaaacgcttcggggagttggaaacacgctttgatccgaagatacccgaatggggcaacc 48943 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 |||||||| || |||||| ||| | ||||||| |||| | ||||||||||||| Sbjct: 48942 ctttaaactaccgactgaattcataggtcggcaagaagtaacccgctgaactgaaacatc 48883 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 |||||| | ||||||||||||||||| ||||||||| ||||||||||||||||| |||| Sbjct: 48882 ttagtaagcggaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaagtggg 48823 Query: 239 agcagcctaaaccg 252 | |||||||||||| Sbjct: 48822 aacagcctaaaccg 48809 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||| ||||||||||||||||| ||||||| ||||| Sbjct: 137056 ccgcgttcctgttgaagaatgagctggcgacttatagg 137093 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||| ||||||||||||||||| ||||||| ||||| Sbjct: 48488 ccgcgttcctgttgaagaatgagctggcgacttatagg 48451 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ggtggatacctaggcaccca 30 |||||||||||||||||||| Sbjct: 136496 ggtggatacctaggcaccca 136515 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 ggtggatacctaggcaccca 30 |||||||||||||||||||| Sbjct: 49048 ggtggatacctaggcaccca 49029
>gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3403 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 584 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 643 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||| ||||||||||||||||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 644 taaatattcctgggtgaccgatagtgaaatagtaccacgagggaaaggtgaaaagtaccc 703 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | ||| ||||||||||||| ||||||||| Sbjct: 704 ctgtgggggagtgaaatagaacatgaaaccgt 735 Score = 115 bits (58), Expect = 2e-22 Identities = 88/98 (89%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||||||||| | |||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 141 agagacaacccagtgaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgat 200 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||||||||| |||||||||| |||| ||||||||| Sbjct: 201 tcccgtagtagtggcgagcgaaccgggaacagcctaaa 238 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 ||||||||||||||||||||||||| |||||| ||||| Sbjct: 772 ccgcgtgcctgttgaagaatgagcctgcgacttatagg 809
>gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5001 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 381 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 440 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 441 taaatactcttgggtgaccgatagcgaaacagtaccgtgagggaaaggtgaaaagaacct 500 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | ||| ||||||||||| | ||||||||| Sbjct: 501 catcaggggagtgaaatagaccatgaaaccgt 532 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Plus Query: 152 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 211 |||||||||| | ||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 149 agagacaaccgagtgaattgaaacatcttagtagctcgaggaagagaaagcaaaagcgat 208 Query: 212 tcccgtagtagcggcgagcgaaatgggagcagcctaaa 249 ||||| |||||||||||||||||||||| ||||||||| Sbjct: 209 tcccggagtagcggcgagcgaaatgggaacagcctaaa 246 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 569 gtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||| ||||||| ||||| Sbjct: 572 gtgcctgttgaagaatgagctggcgacttatagg 605 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 ggtggatacctaggcaccca 30 |||||||||||||||||||| Sbjct: 10 ggtggatacctaggcaccca 29
>gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3455 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 624 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 683 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 684 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 743 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | || ||||||||||||| ||||||||| Sbjct: 744 ttgttagggagtgaaatagaacatgaaaccgt 775 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 811 ccgcgtgcctgttgaagaatgagccggcgacttatagg 848 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CpaI, site-specific DNA endonuclease I-CpaIII, site-specific DNA endonuclease I-CpaIV, site-specific DNA endonuclease I-CpaV genes Length = 8217 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 517 cccgagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 576 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||| Sbjct: 577 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaatggtgaaaagaaccc 636 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | ||| ||||||||||||| ||||||||| Sbjct: 637 ctgtgggggagtgaaatagaacatgaaaccgt 668 Score = 137 bits (69), Expect = 5e-29 Identities = 162/193 (83%) Strand = Plus / Plus Query: 59 cgaaatgcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacc 118 ||||| ||||||||||| || || |||| | |||||| |||||||| |||||| ||||| Sbjct: 67 cgaaacgcttcggggagctggcaacaagctttgatccgaagattcccgaatagggcaacc 126 Query: 119 ttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatc 178 | ||||||| ||| ||| ||| ||| |||||| |||| | ||||||||||||| Sbjct: 127 tattaaacttcctatacaattcatatttaggaaagagagaacccagtgaactgaaacatc 186 Query: 179 ttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatggg 238 | |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 187 taagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaactggg 246 Query: 239 agcagcctaaacc 251 | ||||||||||| Sbjct: 247 atcagcctaaacc 259 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||| ||||||||||||||||||||| ||||| Sbjct: 704 ccgcgtgcctattgaagaatgagccggcgacttatagg 741
>gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3923 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 459 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 518 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 519 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 578 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 | || ||||||||||||| ||||||||| Sbjct: 579 ttgttagggagtgaaatagaacatgaaaccgt 610 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaatagaaagcaaacgcgattcccgtagtagcgg 234 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 646 ccgcgtgcctgttgaagaatgagccggcgacttatagg 683 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 65 gcttcggggagttgaaaataagcatagatccggagattcccaaataggtcaacct 119 ||||||||||| || || |||||| ||||||||||||||| |||||| |||||| Sbjct: 73 gcttcggggagctggcaacaagcattgatccggagattcccgaatagggcaacct 127
>gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large subunit ribosomal RNA (rrnL) gene Length = 2792 Score = 174 bits (88), Expect = 2e-40 Identities = 136/152 (89%) Strand = Plus / Plus Query: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 430 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 509 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 568 Query: 431 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 490 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 569 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 628 Query: 491 ccagtgggtagtgaaatagaacgtgaaaccgt 522 || |||| ||||||||||||| ||||||||| Sbjct: 629 ccgttggggagtgaaatagaacatgaaaccgt 660 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 166 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 225 |||||||||||||| |||||| |||||||||||||||||||||||||||||||||| || Sbjct: 156 gaactgaaacatctaagtagctggaggaaaagaaagcaaaagcgattcccgtagtagtgg 215 Query: 226 cgagcgaaatgggagcagcctaaacc 251 |||||||| |||| ||||||||||| Sbjct: 216 cgagcgaaccgggaacagcctaaacc 241 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Plus Query: 565 ccgcgtgcctgttgaagaatgagccggcgactcatagg 602 |||||||||||||||||||||||||||||||| ||||| Sbjct: 695 ccgcgtgcctgttgaagaatgagccggcgacttatagg 732 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,047,605 Number of Sequences: 3902068 Number of extensions: 4047605 Number of successful extensions: 119410 Number of sequences better than 10.0: 26621 Number of HSP's better than 10.0 without gapping: 26445 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74787 Number of HSP's gapped (non-prelim): 42300 length of query: 602 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 579 effective length of database: 17,143,297,704 effective search space: 9925969370616 effective search space used: 9925969370616 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
