ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd13o08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 1068 bits (539), Expect = 0.0 Identities = 580/592 (97%), Gaps = 3/592 (0%) Strand = Plus / Plus Query: 48 cagaatattctgtctcatagttctgaaatagagttctttatttttatttttatagtatta 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3194 cagaatattctgtctcatagttctgaaatagagttctttatttttatttttatagtatta 3253 Query: 108 cttctcattatactgcatagattagtcctactatcttaattaggttctaattattctaat 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3254 cttctcattatactgcatagattagtcctactatcttaattaggttctaattattctaat 3313 Query: 168 tagtagtattctcatttttatttaatagtctcttattattattaaatagtaaataaagga 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3314 tagtagtattctcatttttatttaatagtctcttattattattaaatagtaaataaagga 3373 Query: 228 tagagctattcnnnnnnnatagagattctagagaaagcgagacaaagtgaaacgataaag 287 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 3374 tagagctattctttttttatagagattctagagaaagcgagacaaagtgaaacgataaag 3433 Query: 288 ttttctttatataagaattagatctacatacaccatatctaaatagaatggaaatccaaa 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3434 ttttctttatataagaattagatctacatacaccatatctaaatagaatggaaatccaaa 3493 Query: 348 agaaagggagttgggattccattggatgaatctttaaagaagatgcagcacagaggaaac 407 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3494 agaaagggagttgggattccattggatgaagctttaaagaagatgcagcacagaggaaac 3553 Query: 408 aaaggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaag 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3554 aaaggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaag 3613 Query: 468 aggagaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcct 527 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3614 a-gagaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcct 3672 Query: 528 attccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttgga 587 ||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 3673 attccacattaat-gggagtaca-ttatgtttctgcttcacgaatatgatattttttgga 3730 Query: 588 catttctaataatagcaagccttattcctattttggcattttcgatttcagg 639 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3731 catttctaataatagcaagccttattcctattttggcattttcgatttcagg 3782
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 924 bits (466), Expect = 0.0 Identities = 576/609 (94%), Gaps = 22/609 (3%) Strand = Plus / Minus Query: 48 cagaatattctgtctcatagttctgaaatagagttctttatttttatttttatagtatta 107 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 50748 cagaatattctgtctcatagttctgaaatagagttctttatttttatttt-atagtatta 50690 Query: 108 cttctcatta----tactgcatagattagtcctactatcttaattaggttctaattattc 163 |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 50689 cttctcattaattctactgcatagattagtcctactatcttaattaggttctaatt---- 50634 Query: 164 taattagtagtattctcatttttatttaatagtctcttattatt-----attaaatagta 218 |||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 50633 ----tagtagtattctcatttttatttaatagtctcttattattttattattaaatatta 50578 Query: 219 aataaaggatagagctattcnnnnnnnatagagattctagagaaagcgagacaaagtgaa 278 |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 50577 aataaaggatagagctattcttttttc-tagagattctagagaaagcgagacaaagtgaa 50519 Query: 279 acgataaagttttctttatataagaattagatctacatacaccatatctaaatagaatgg 338 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50518 acgagaaagttttctttatataagaattagatctacatacaccatatctaaatagaatgg 50459 Query: 339 aaatccaaaagaaagggagttgggattccattggatgaatctttaaagaagatgcagcac 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50458 aaatccaaaagaaagggagttgggattccattggatgaatctttaaagaagatgcagcac 50399 Query: 399 agaggaaacaaaggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcacc 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50398 agaggaaacaaaggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcacc 50339 Query: 459 gaggaaaagaggagaagttctggataaattgacaatgctgaattgaattgactaatttaa 518 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50338 gaggaaaaga-gagaagttctggataaattgacaatgctgaattgaattgactaatttaa 50280 Query: 519 gttccgcctattccacattaatggggagtacatttatgtttctgctttacgaatatgata 578 |||||||||||||||||||||| ||||||||| |||||||||||||| |||||||||||| Sbjct: 50279 gttccgcctattccacattaat-gggagtaca-ttatgtttctgcttcacgaatatgata 50222 Query: 579 ttttttggacatttctaataatagcaagccttattcctattttggcattttcgatttcag 638 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50221 ttttttggacatttctaataatagcaagccttattcctattttggcattttcgatttcag 50162 Query: 639 ggcttttag 647 | ||||||| Sbjct: 50161 gacttttag 50153
>gb|J04954.1|WHTCPPSBG Triticum aestivum chloroplast NADPH-plastoquinone oxireductase (psbG) and thylakoid membrane protein (ndhC) genes, complete cds Length = 1492 Score = 613 bits (309), Expect = e-172 Identities = 336/341 (98%), Gaps = 3/341 (0%) Strand = Plus / Plus Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 60 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 120 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 121 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaaga-gagaagttctggataaa 179 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 180 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaat-gggag 238 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 taca-ttatgtttctgcttcacgaatatgatattttttggacatttctaataatagcaag 297 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 298 ccttattcctattttggcattttcgatttcaggacttttag 338
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 436 bits (220), Expect = e-119 Identities = 359/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49903 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49844 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 49843 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 49788 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 49787 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 49728 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 49727 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 49669 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 49668 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 49611 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 49610 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 49551 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 49550 ccttattcctattttagcattttggatttcagcacttttag 49510 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 50019 gttctgaaatagagttctt------tatttttatagaattactcctcattaggctgcata 49966 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 49965 cattagtcatcctatcttaattaggctctaatt 49933
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 436 bits (220), Expect = e-119 Identities = 359/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 48157 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 48098 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 48097 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 48042 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 48041 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 47982 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 47981 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 47923 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 47922 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 47865 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 47864 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 47805 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 47804 ccttattcctattttagcattttggatttcagcacttttag 47764 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 48273 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 48220 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 48219 cattagtcatcctatcttaattaggctctaatt 48187
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 436 bits (220), Expect = e-119 Identities = 359/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 123090 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 123031 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 123030 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 122975 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 122974 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 122915 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 122914 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 122856 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 122855 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 122798 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 122797 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 122738 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 122737 ccttattcctattttagcattttggatttcagcacttttag 122697 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 123206 gttctgaaatagagttct------ttatttttatagaattactcctcattaggctgcata 123153 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 123152 cattagtcatcctatcttaattaggctctaatt 123120
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 436 bits (220), Expect = e-119 Identities = 359/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 10341765 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 10341706 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 10341705 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 10341650 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 10341649 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 10341590 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 10341589 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 10341531 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 10341530 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 10341473 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 10341472 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 10341413 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 10341412 ccttattcctattttagcattttggatttcagcacttttag 10341372 Score = 428 bits (216), Expect = e-116 Identities = 358/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 19944647 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 19944706 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 19944707 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 19944762 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 19944763 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 19944822 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 19944823 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 19944881 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 19944882 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 19944939 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 19944940 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 19944999 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 19945000 ccttattcctattttagcattttggatttcagcacttttag 19945040 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 19944531 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 19944584 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 19944585 cattagtcatcctatcttaattaggctctaatt 19944617 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 10341881 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 10341828 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 10341827 cattagtcatcctatcttaattaggctctaatt 10341795
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 436 bits (220), Expect = e-119 Identities = 359/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 10347804 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 10347745 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 10347744 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 10347689 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 10347688 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 10347629 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 10347628 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 10347570 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 10347569 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 10347512 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 10347511 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 10347452 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 10347451 ccttattcctattttagcattttggatttcagcacttttag 10347411 Score = 428 bits (216), Expect = e-116 Identities = 358/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 19955923 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 19955982 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 19955983 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 19956038 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 19956039 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 19956098 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 19956099 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 19956157 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 19956158 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 19956215 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 19956216 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 19956275 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 19956276 ccttattcctattttagcattttggatttcagcacttttag 19956316 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 19955807 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 19955860 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 19955861 cattagtcatcctatcttaattaggctctaatt 19955893 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 10347920 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 10347867 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 10347866 cattagtcatcctatcttaattaggctctaatt 10347834
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 428 bits (216), Expect = e-116 Identities = 358/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49955 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49896 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 49895 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 49840 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 49839 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 49780 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 49779 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 49721 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 49720 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 49663 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 49662 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 49603 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 49602 ccttattcctattttagcattttggatttcagcacttttag 49562 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 50071 gttctgaaatagagttctt------tatttttatagaattactcctcattaggctgcata 50018 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 50017 cattagtcatcctatcttaattaggctctaatt 49985
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 428 bits (216), Expect = e-116 Identities = 358/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49955 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49896 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 49895 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 49840 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 49839 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 49780 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 49779 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 49721 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 49720 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 49663 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 49662 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 49603 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 49602 ccttattcctattttagcattttggatttcagcacttttag 49562 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||||| ||||||||||| |||||| ||||||| ||||||| Sbjct: 50071 gttctgaaatagagttctt------tatttttatagaattactcctcattaggctgcata 50018 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 50017 cattagtcatcctatcttaattaggctctaatt 49985
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 428 bits (216), Expect = e-116 Identities = 358/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 41396 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 41337 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 41336 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 41281 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 41280 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 41221 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 41220 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 41162 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 41161 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 41104 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 41103 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 41044 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 41043 ccttattcctattttagcattttggatttcagcacttttag 41003 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 41512 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 41459 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 41458 cattagtcatcctatcttaattaggctctaatt 41426
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 428 bits (216), Expect = e-116 Identities = 358/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49882 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49823 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| | ||||| |||||||||||||| ||||||| Sbjct: 49822 atgtctcca----ccatacctaaatagaaagtaaatcaaaaagaaagggagtcgggattc 49767 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 49766 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 49707 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 49706 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 49648 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 49647 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 49590 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 49589 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 49530 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 49529 ccttattcctattttagcattttggatttcagcacttttag 49489 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 49998 gttctgaaatagagttct------ttatttttatagaattactcctcattaggctgcata 49945 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 49944 cattagtcatcctatcttaattaggctctaatt 49912
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 420 bits (212), Expect = e-114 Identities = 358/401 (89%), Gaps = 8/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 49961 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 49902 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| ||||||||||| || ||||||| Sbjct: 49901 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggggtcgggattc 49846 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 49845 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagc-ct 49787 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| |||||||||||||||||||||| |||| ||||| ||||| Sbjct: 49786 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag-agaaattctgtataaa 49728 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||| || Sbjct: 49727 ttgacaatgctgacttgaattgactaattca-gttccgcctattccacattaatggg-ag 49670 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 49669 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 49610 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 49609 ccttattcctattttagcattttggatttcagcacttttag 49569 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 50077 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 50024 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 50023 cattagtcatcctatcttaattaggctctaatt 49991
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 420 bits (212), Expect = e-114 Identities = 357/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||| ||||| ||| | |||||| ||| |||||||||| Sbjct: 11286117 tagagattctagagaaaatgagacaacgtgaagcgagagagttttgtttctataagaatt 11286058 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| |||||| |||||||||||||| ||||||| Sbjct: 11286057 atgtctcca----ccatacctaaatagaaaggaaataaaaaagaaagggagtcgggattc 11286002 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 11286001 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 11285942 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 11285941 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 11285883 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 11285882 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 11285825 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 11285824 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 11285765 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 11285764 ccttattcctattttagcattttggatttcagcacttttag 11285724 Score = 406 bits (205), Expect = e-110 Identities = 357/402 (88%), Gaps = 8/402 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 5608993 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 5608934 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 5608933 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 5608878 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 5608877 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 5608818 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||| | ||||| ||||| | ||| Sbjct: 5608817 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaa-aagagaaattctgtaaaaa 5608759 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 5608758 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 5608701 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 5608700 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 5608641 Query: 607 ccttattccta-ttttggcattttcgatttcagggcttttag 647 ||||||||||| |||| ||||||| |||||||| ||||||| Sbjct: 5608640 ccttattcctatttttagcattttggatttcagcacttttag 5608599 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 11286233 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 11286180 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 11286179 cattagtcatcctatcttaattaggctctaatt 11286147 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 5609109 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 5609056 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 5609055 cattagtcatcctatcttaattaggctctaatt 5609023
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 420 bits (212), Expect = e-114 Identities = 357/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||| ||||| ||| | |||||| ||| |||||||||| Sbjct: 11285788 tagagattctagagaaaatgagacaacgtgaagcgagagagttttgtttctataagaatt 11285729 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| |||||| |||||||||||||| ||||||| Sbjct: 11285728 atgtctcca----ccatacctaaatagaaaggaaataaaaaagaaagggagtcgggattc 11285673 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 11285672 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 11285613 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 11285612 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 11285554 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 11285553 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 11285496 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 11285495 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 11285436 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 11285435 ccttattcctattttagcattttggatttcagcacttttag 11285395 Score = 406 bits (205), Expect = e-110 Identities = 357/402 (88%), Gaps = 8/402 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 5608982 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 5608923 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 5608922 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 5608867 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 5608866 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 5608807 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||| | ||||| ||||| | ||| Sbjct: 5608806 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaa-aagagaaattctgtaaaaa 5608748 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 5608747 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 5608690 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 5608689 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 5608630 Query: 607 ccttattccta-ttttggcattttcgatttcagggcttttag 647 ||||||||||| |||| ||||||| |||||||| ||||||| Sbjct: 5608629 ccttattcctatttttagcattttggatttcagcacttttag 5608588 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 11285904 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 11285851 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 11285850 cattagtcatcctatcttaattaggctctaatt 11285818 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||| |||||||||||| |||||| ||||||| ||||||| Sbjct: 5609098 gttctgaaatagagttct------ttatttttatagaattactcctcattaggctgcata 5609045 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 5609044 cattagtcatcctatcttaattaggctctaatt 5609012
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 420 bits (212), Expect = e-114 Identities = 357/401 (89%), Gaps = 7/401 (1%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||| ||||| ||| | |||||| ||| |||||||||| Sbjct: 85937 tagagattctagagaaaatgagacaacgtgaagcgagagagttttgtttctataagaatt 85996 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| |||||| |||||||||||||| ||||||| Sbjct: 85997 atgtctcca----ccatacctaaatagaaaggaaataaaaaagaaagggagtcgggattc 86052 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 86053 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 86112 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 86113 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 86171 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 86172 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 86229 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 86230 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 86289 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||| ||||||| |||||||| ||||||| Sbjct: 86290 ccttattcctattttagcattttggatttcagcacttttag 86330 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 85821 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 85874 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 85875 cattagtcatcctatcttaattaggctctaatt 85907
>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23, complete sequence Length = 130273 Score = 412 bits (208), Expect = e-112 Identities = 356/401 (88%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 78221 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 78162 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 78161 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 78106 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 78105 tattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 78046 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 78045 ttggtttgagaaaaaccgatccttgtttcaccaaggaaaaga-gagaaattctgtataaa 77987 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 77986 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 77929 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 77928 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 77869 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||| ||||||| ||||||| |||||||| ||||||| Sbjct: 77868 ccttatttctattttagcattttggatttcagcacttttag 77828 Score = 67.9 bits (34), Expect = 4e-08 Identities = 78/93 (83%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 78337 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 78284 Query: 127 gattagtcctactatcttaattaggttctaatt 159 |||| || | |||||||||||||| ||||||| Sbjct: 78283 cattactcatcctatcttaattaggctctaatt 78251
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 412 bits (208), Expect = e-112 Identities = 356/401 (88%), Gaps = 7/401 (1%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 23635540 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 23635481 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 23635480 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 23635425 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 23635424 tattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 23635365 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||| ||||||||| ||||| ||||| ||||| Sbjct: 23635364 ttggtttgagaaaaaccgatccttgtttcaccaaggaaaaga-gagaaattctgtataaa 23635306 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 23635305 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 23635248 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 23635247 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 23635188 Query: 607 ccttattcctattttggcattttcgatttcagggcttttag 647 ||||||| ||||||| ||||||| |||||||| ||||||| Sbjct: 23635187 ccttatttctattttagcattttggatttcagcacttttag 23635147 Score = 278 bits (140), Expect = 2e-71 Identities = 209/228 (91%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 411 ggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaagagg 470 ||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 14048422 ggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag- 14048364 Query: 471 agaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctatt 530 |||| ||||| |||||||||||||||||| ||||||||||||||| | |||||||||||| Sbjct: 14048363 agaaattctgtataaattgacaatgctgacttgaattgactaattca-gttccgcctatt 14048305 Query: 531 ccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggacat 590 ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 14048304 ccacattaatggg-agtacatttatgtttctgcttcacgaatataatattttttgggcat 14048246 Query: 591 ttctaataatagcaagccttattcctattttggcattttcgatttcag 638 ||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 14048245 ttctaataatagcaagccttattcctattttagcattttggatttcag 14048198 Score = 270 bits (136), Expect = 5e-69 Identities = 208/228 (91%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 411 ggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaagagg 470 ||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 9748533 ggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag- 9748591 Query: 471 agaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctatt 530 |||| ||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||| Sbjct: 9748592 agaaattctgtataaattgacaatgctgacttgaattgactaattca-gttccaactatt 9748650 Query: 531 ccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggacat 590 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 9748651 ccacattaatggg-agtacatttatgtttctgcttcacgaatatgatattttttgggcat 9748709 Query: 591 ttctaataatagcaagccttattcctattttggcattttcgatttcag 638 ||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 9748710 ttctaataatagcaagccttattcctattttagcattttggatttcag 9748757 Score = 67.9 bits (34), Expect = 4e-08 Identities = 78/93 (83%), Gaps = 6/93 (6%) Strand = Plus / Minus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 |||||||||||||||||||| |||||||||| |||||| ||||||| ||||||| Sbjct: 23635656 gttctgaaatagagttcttt------atttttatagaattactcctcattaggctgcata 23635603 Query: 127 gattagtcctactatcttaattaggttctaatt 159 |||| || | |||||||||||||| ||||||| Sbjct: 23635602 cattactcatcctatcttaattaggctctaatt 23635570
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 406 bits (205), Expect = e-110 Identities = 357/402 (88%), Gaps = 8/402 (1%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 43892 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 43951 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 43952 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcgggattc 44007 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 44008 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 44067 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||| | ||||| ||||| | ||| Sbjct: 44068 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaa-aagagaaattctgtaaaaa 44126 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 44127 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 44184 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| Sbjct: 44185 tacatttatgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaag 44244 Query: 607 ccttattccta-ttttggcattttcgatttcagggcttttag 647 ||||||||||| |||| ||||||| |||||||| ||||||| Sbjct: 44245 ccttattcctatttttagcattttggatttcagcacttttag 44286 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 43776 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 43829 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 43830 cattagtcatcctatcttaattaggctctaatt 43862
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 402 bits (203), Expect = e-109 Identities = 357/403 (88%), Gaps = 9/403 (2%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 12588823 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 12588882 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| |||||| Sbjct: 12588883 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcaggattc 12588938 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 12588939 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 12588998 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 12588999 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 12589057 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 12589058 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 12589115 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||| Sbjct: 12589116 tacatttatgtttctgcttcatgaatatgatattttttgggcatttctaataatagcaag 12589175 Query: 607 ccttattccta--ttttggcattttcgatttcagggcttttag 647 ||||||||||| |||| ||||||| |||||||| ||||||| Sbjct: 12589176 ccttattcctattttttagcattttggatttcagcacttttag 12589218 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 23209025 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 23209078 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 23209079 cattagtcatcctatcttaattaggctctaatt 23209111 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 12588707 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 12588760 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 12588761 cattagtcatcctatcttaattaggctctaatt 12588793 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaa 278 ||||||||||||||||| ||||||||||||| Sbjct: 23209141 tagagattctagagaaaatgagacaaagtgaa 23209172
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 402 bits (203), Expect = e-109 Identities = 357/403 (88%), Gaps = 9/403 (2%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 ||||||||||||||||| ||||||||||||| ||| | |||||| ||| |||||||||| Sbjct: 71136 tagagattctagagaaaatgagacaaagtgaagcgagagagttttgtttctataagaatt 71195 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 | ||| || ||||| |||||||||| ||||||| |||||||||||||| |||||| Sbjct: 71196 atgtctcca----ccatacctaaatagaaaggaaatcaaaaagaaagggagtcaggattc 71251 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 |||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| || Sbjct: 71252 cattggatgaatctttaaagaagacgtggcaaagaggaaacaaaggctaaactaagccct 71311 Query: 427 tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaa 486 || |||||| |||| ||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 71312 ttggtttgagaaaaaccgatccttgtttcaccgaggaaaaga-gagaaattctgtataaa 71370 Query: 487 ttgacaatgctgaattgaattgactaatttaagttccgcctattccacattaatggggag 546 ||||||||||||| ||||||||||||| || ||||||||||||||||||||||| ||||| Sbjct: 71371 ttgacaatgctgacttgaattgactaa-ttcagttccgcctattccacattaat-gggag 71428 Query: 547 tacatttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaag 606 ||||||||||||||||||| | |||||||||||||||||| ||||||||||||||||||| Sbjct: 71429 tacatttatgtttctgcttcatgaatatgatattttttgggcatttctaataatagcaag 71488 Query: 607 ccttattccta--ttttggcattttcgatttcagggcttttag 647 ||||||||||| |||| ||||||| |||||||| ||||||| Sbjct: 71489 ccttattcctattttttagcattttggatttcagcacttttag 71531 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 71020 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 71073 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 71074 cattagtcatcctatcttaattaggctctaatt 71106
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 394 bits (199), Expect = e-106 Identities = 359/409 (87%), Gaps = 15/409 (3%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 52525 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 52466 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 || |||| || ||||||||||||||| ||||||| ||||||| || ||| |||||| Sbjct: 52465 aggtctatat----catatctaaatagaagggaaatcaaaaagaagggaagtggggatta 52410 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 ||||||||||||| |||| ||||| | |||| | |||| |||||||||| |||||||| Sbjct: 52409 cattggatgaatccttaaggaagacatatcacaaaagaaataaaggctaaagtaagcgct 52350 Query: 427 --------tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttc 478 || |||||| ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 52349 ccttgcctttggtttgagcaaaacagattcttgtttcaccgaggaaaagag-agaagttc 52291 Query: 479 tggataaattgacaatgctgaattgaattgactaatttaagttccgcctattccacatta 538 ||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||| Sbjct: 52290 tggataaattgacaatgtcaacttgaattgactaattca-gttccgcctattccacatta 52232 Query: 539 atggggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaata 598 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52231 atggg-agtacatttatgtttctgcttcacgaatatgatattttttggacatttctaata 52173 Query: 599 atagcaagccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 52172 atagcaagccttattcctattttggtattttggatttcaggacttttag 52124 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 52 atattctgtctcatagttctgaaatagagttctttatttt 91 ||||||||| ||||| ||||||||||||||||||| |||| Sbjct: 52727 atattctgtttcataattctgaaatagagttctttttttt 52688 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 172 agtattctcatttttatttaatagtctcttattattattaaata 215 |||||| || ||||||||||||||||||| | ||| |||||||| Sbjct: 52592 agtattttcttttttatttaatagtctctgactatcattaaata 52549
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 394 bits (199), Expect = e-106 Identities = 359/409 (87%), Gaps = 15/409 (3%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 114679 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 114620 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 || |||| || ||||||||||||||| ||||||| ||||||| | ||| |||||| Sbjct: 114619 aggtctatat----catatctaaatagaagggaaatcaaaaagaaggcaagtggggatta 114564 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 ||||||||||||| |||| ||||| | |||| | ||||||||||||||| |||||||| Sbjct: 114563 cattggatgaatccttaaggaagacatatcacaaaagaaacaaaggctaaagtaagcgct 114504 Query: 427 --------tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttc 478 || |||||| ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 114503 ccttgcctttggtttgagcaaaacagattcttgtttcaccgaggaaaagag-agaagttc 114445 Query: 479 tggataaattgacaatgctgaattgaattgactaatttaagttccgcctattccacatta 538 ||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||| Sbjct: 114444 tggataaattgacaatgtcaacttgaattgactaattca-gttccgcctattccacatta 114386 Query: 539 atggggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaata 598 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114385 atggg-agtacatttatgtttctgcttcacgaatatgatattttttggacatttctaata 114327 Query: 599 atagcaagccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 114326 atagcaagccttattcctattttggtattttggatttcaggacttttag 114278 Score = 42.1 bits (21), Expect = 2.2 Identities = 89/111 (80%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 94 tttttatagtattacttctcattatactgcatagattagtcctactatcttaattaggtt 153 ||||| |||||||||| ||||||| || ||| |||| || | | || ||||||||||| Sbjct: 114824 tttttttagtattactcctcattaggatgtatatattaatcatccgattttaattaggtt 114765 Query: 154 ctaattattctaattagt----agtattctcatttttatttaatagtctct 200 |||| |||||||||| |||||| || ||||||||||||||||||| Sbjct: 114764 ctaa----tctaattagtagtaagtattttcttttttatttaatagtctct 114718
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 394 bits (199), Expect = e-106 Identities = 359/409 (87%), Gaps = 15/409 (3%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 52514 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 52455 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 || |||| || ||||||||||||||| ||||||| ||||||| || ||| |||||| Sbjct: 52454 aggtctatat----catatctaaatagaagggaaatcaaaaagaagggaagtggggatta 52399 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 ||||||||||||| |||| ||||| | |||| | |||| |||||||||| |||||||| Sbjct: 52398 cattggatgaatccttaaggaagacatatcacaaaagaaataaaggctaaagtaagcgct 52339 Query: 427 --------tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttc 478 || |||||| ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 52338 ccttgcctttggtttgagcaaaacagattcttgtttcaccgaggaaaagag-agaagttc 52280 Query: 479 tggataaattgacaatgctgaattgaattgactaatttaagttccgcctattccacatta 538 ||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||| Sbjct: 52279 tggataaattgacaatgtcaacttgaattgactaattca-gttccgcctattccacatta 52221 Query: 539 atggggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaata 598 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52220 atggg-agtacatttatgtttctgcttcacgaatatgatattttttggacatttctaata 52162 Query: 599 atagcaagccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 52161 atagcaagccttattcctattttggtattttggatttcaggacttttag 52113 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 52 atattctgtctcatagttctgaaatagagttctttatttt 91 ||||||||| ||||| ||||||||||||||||||| |||| Sbjct: 52716 atattctgtttcataattctgaaatagagttctttttttt 52677 Score = 48.1 bits (24), Expect = 0.036 Identities = 39/44 (88%) Strand = Plus / Minus Query: 172 agtattctcatttttatttaatagtctcttattattattaaata 215 |||||| || ||||||||||||||||||| | ||| |||||||| Sbjct: 52581 agtattttcttttttatttaatagtctctgactatcattaaata 52538
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 394 bits (199), Expect = e-106 Identities = 359/409 (87%), Gaps = 15/409 (3%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaaacgataaagttttctttatataagaatt 306 |||||||||||||||||| ||||||||||||| ||| | |||||||||| |||||||||| Sbjct: 53052 tagagattctagagaaagtgagacaaagtgaagcgaaagagttttctttgtataagaatt 52993 Query: 307 agatctacatacaccatatctaaatagaatggaaatccaaaagaaagggagttgggattc 366 || |||| || ||||||||||||||| ||||||| ||||||| | ||| |||||| Sbjct: 52992 aggtctatat----catatctaaatagaagggaaatcaaaaagaaggcaagtggggatta 52937 Query: 367 cattggatgaatctttaaagaagatgcagcacagaggaaacaaaggctaaactaagcgct 426 ||||||||||||| |||| ||||| | |||| | ||||||||||||||| |||||||| Sbjct: 52936 cattggatgaatccttaaggaagacatatcacaaaagaaacaaaggctaaagtaagcgct 52877 Query: 427 --------tttgtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttc 478 || |||||| ||||| ||||||||||||||||||||||||||| |||||||| Sbjct: 52876 ccttgcctttggtttgagcaaaacagattcttgtttcaccgaggaaaagag-agaagttc 52818 Query: 479 tggataaattgacaatgctgaattgaattgactaatttaagttccgcctattccacatta 538 ||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||| Sbjct: 52817 tggataaattgacaatgtcaacttgaattgactaattca-gttccgcctattccacatta 52759 Query: 539 atggggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaata 598 ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 52758 atggg-agtacatttatgtttctgcttcacgaatatgatattttttggacatttctaata 52700 Query: 599 atagcaagccttattcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 52699 atagcaagccttattcctattttggtattttggatttcaggacttttag 52651 Score = 42.1 bits (21), Expect = 2.2 Identities = 89/111 (80%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 94 tttttatagtattacttctcattatactgcatagattagtcctactatcttaattaggtt 153 ||||| |||||||||| ||||||| || ||| |||| || | | || ||||||||||| Sbjct: 53197 tttttttagtattactcctcattaggatgtatatattaatcatccgattttaattaggtt 53138 Query: 154 ctaattattctaattagt----agtattctcatttttatttaatagtctct 200 |||| |||||||||| |||||| || ||||||||||||||||||| Sbjct: 53137 ctaa----tctaattagtagtaagtattttcttttttatttaatagtctct 53091
>emb|AL731596.3|OSJN00236 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0024J22, complete sequence Length = 174430 Score = 278 bits (140), Expect = 2e-71 Identities = 209/228 (91%), Gaps = 3/228 (1%) Strand = Plus / Minus Query: 411 ggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaagagg 470 ||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 162302 ggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag- 162244 Query: 471 agaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctatt 530 |||| ||||| |||||||||||||||||| ||||||||||||||| | |||||||||||| Sbjct: 162243 agaaattctgtataaattgacaatgctgacttgaattgactaattca-gttccgcctatt 162185 Query: 531 ccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggacat 590 ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 162184 ccacattaatggg-agtacatttatgtttctgcttcacgaatataatattttttgggcat 162126 Query: 591 ttctaataatagcaagccttattcctattttggcattttcgatttcag 638 ||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 162125 ttctaataatagcaagccttattcctattttagcattttggatttcag 162078
>emb|AL662942.4|OSJN00135 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033H08, complete sequence Length = 141899 Score = 278 bits (140), Expect = 2e-71 Identities = 209/228 (91%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 411 ggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaagagg 470 ||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 124470 ggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag- 124528 Query: 471 agaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctatt 530 |||| ||||| |||||||||||||||||| ||||||||||||||| | |||||||||||| Sbjct: 124529 agaaattctgtataaattgacaatgctgacttgaattgactaattca-gttccgcctatt 124587 Query: 531 ccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggacat 590 ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 124588 ccacattaatggg-agtacatttatgtttctgcttcacgaatataatattttttgggcat 124646 Query: 591 ttctaataatagcaagccttattcctattttggcattttcgatttcag 638 ||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 124647 ttctaataatagcaagccttattcctattttagcattttggatttcag 124694
>dbj|AK069240.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010F18, full insert sequence Length = 3557 Score = 278 bits (140), Expect = 2e-71 Identities = 209/228 (91%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 411 ggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaagagg 470 ||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 1319 ggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag- 1377 Query: 471 agaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctatt 530 |||| ||||| |||||||||||||||||| ||||||||||||||| | |||||||||||| Sbjct: 1378 agaaattctgtataaattgacaatgctgacttgaattgactaattca-gttccgcctatt 1436 Query: 531 ccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggacat 590 ||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct: 1437 ccacattaatggg-agtacatttatgtttctgcttcacgaatataatattttttgggcat 1495 Query: 591 ttctaataatagcaagccttattcctattttggcattttcgatttcag 638 ||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 1496 ttctaataatagcaagccttattcctattttagcattttggatttcag 1543
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 270 bits (136), Expect = 5e-69 Identities = 208/228 (91%), Gaps = 3/228 (1%) Strand = Plus / Plus Query: 411 ggctaaactaagcgcttttgtttgaacaaaaaagattcttgtttcaccgaggaaaagagg 470 ||||||||||||| |||| |||||| |||| ||| |||||||||||||||||||||| Sbjct: 80739 ggctaaactaagccctttggtttgagaaaaaccgatccttgtttcaccgaggaaaagag- 80797 Query: 471 agaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctatt 530 |||| ||||| |||||||||||||||||| ||||||||||||||| | ||||| ||||| Sbjct: 80798 agaaattctgtataaattgacaatgctgacttgaattgactaattca-gttccaactatt 80856 Query: 531 ccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggacat 590 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 80857 ccacattaatggg-agtacatttatgtttctgcttcacgaatatgatattttttgggcat 80915 Query: 591 ttctaataatagcaagccttattcctattttggcattttcgatttcag 638 ||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 80916 ttctaataatagcaagccttattcctattttagcattttggatttcag 80963
>emb|X17438.1|CHZMNPOO Maize chloroplast ndhC, psbG genes for NDH-C, PSII-G and ORF159 Length = 1933 Score = 250 bits (126), Expect = 5e-63 Identities = 167/178 (93%), Gaps = 2/178 (1%) Strand = Plus / Plus Query: 470 gagaagttctggataaattgacaatgctgaattgaattgactaatttaagttccgcctat 529 |||||||||||||||||||||||||| | ||||||||||||||| | ||||||||||| Sbjct: 5 gagaagttctggataaattgacaatgtcaacttgaattgactaattca-gttccgcctat 63 Query: 530 tccacattaatggggagtacatttatgtttctgctttacgaatatgatattttttggaca 589 |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 64 tccacattaatggg-agtacatttatgtttctgcttcacgaatatgatattttttggaca 122 Query: 590 tttctaataatagcaagccttattcctattttggcattttcgatttcagggcttttag 647 |||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 123 tttctaataatagcaagccttattcctattttggtattttggatttcaggacttttag 180
>gb|AY243565.1| Hordeum vulgare chloroplast Ndh complex operon, complete sequence Length = 1778 Score = 186 bits (94), Expect = 6e-44 Identities = 104/106 (98%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 542 gggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataata 601 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6 gggagtacatt-atgtttctgcttcacgaatatgatattttttggacatttctaataata 64 Query: 602 gcaagccttattcctattttggcattttcgatttcagggcttttag 647 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65 gcaagccttattcctattttggcattttcgatttcagggcttttag 110
>ref|NM_197447.1| Oryza sativa (japonica cultivar-group) NADH dehydrogenase ND3 (OSJNBb0005J14.29), mRNA Length = 363 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 atgtttctgcttcacgaatatgatattttttgggcatttctaataatagcaagccttatt 60 Query: 614 cctattttggcattttcgatttcagggcttttag 647 |||||||| ||||||| |||||||| ||||||| Sbjct: 61 cctattttagcattttggatttcagcacttttag 94
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 133 bits (67), Expect = 8e-28 Identities = 88/95 (92%) Strand = Plus / Minus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 |||||||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| Sbjct: 52532 tatgtttctgctttacgaatatgatattttttgggcatttctaataatatcaagtcttat 52473 Query: 613 tcctattttggcattttcgatttcagggcttttag 647 ||||||||||||||||| ||||| ||| |||||| Sbjct: 52472 tcctattttggcatttttcatttccggggttttag 52438
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 52318 ggagtgcatttatgtttctgctttacgaatatgattttttttgggcatttctaataatat 52259 Query: 603 caagccttattcctattttggcatttt 629 ||| |||| |||||||||||||||||| Sbjct: 52258 caatccttgttcctattttggcatttt 52232
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 83145 ggagtacatttatgtttttgctttatgaatatgatattttttggacatttctaataatat 83204 Query: 603 caagccttattcctattttggcattt 628 | | | |||||||||||||||||||| Sbjct: 83205 cgatctttattcctattttggcattt 83230
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 113508 ggagtacatttatgtttttgctttatgaatatgatattttttggacatttctaataatat 113449 Query: 603 caagccttattcctattttggcattt 628 | | | |||||||||||||||||||| Sbjct: 113448 cgatctttattcctattttggcattt 113423
>emb|CT863710.2| Medicago truncatula chromosome 5 clone mth2-52h19, COMPLETE SEQUENCE Length = 118754 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114464 ggagtacatttatgtttttgctttatgaatatgatattttttggacatttctaataatat 114523 Query: 603 caagccttattcctattttggcattt 628 | | | |||||||||||||||||||| Sbjct: 114524 cgatctttattcctattttggcattt 114549
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 100962 ggagtacatttatgtttttgctttatgaatatgatattttttggacatttctaataatat 101021 Query: 603 caagccttattcctattttggcattt 628 | | | |||||||||||||||||||| Sbjct: 101022 cgatctttattcctattttggcattt 101047
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 123 bits (62), Expect = 8e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 10729 ggagtacgtttatgtttcttctttacgaatatgatattttttgggcatttctaataatat 10788 Query: 603 caagccttattcctattttggcattt 628 |||| |||||||||||||||||||| Sbjct: 10789 caagttttattcctattttggcattt 10814
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 117 bits (59), Expect = 5e-23 Identities = 80/87 (91%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||| |||||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 49889 ggagtgcatctatgtttctgctttacgaatatgatattttttgggcatttctgataatat 49830 Query: 603 caagccttattcctattttggcatttt 629 |||| |||||||||||||||| ||||| Sbjct: 49829 caagtcttattcctattttggtatttt 49803
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 51837 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatcaatcctt 51778 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 51777 gttcctattttggcatttt 51759
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||| Sbjct: 51843 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatcaatcctt 51784 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 51783 cttcctattttggcatttt 51765
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 53227 ggagtacgtttatgtttctgctttacgaatatgatattttctgggtatttctaataatat 53168 Query: 603 caagccttattcctattttggcattt 628 |||| |||||||||||||||||||| Sbjct: 53167 caagtgttattcctattttggcattt 53142
>gb|AY936342.1| Evolvulus glomeratus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1744 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||| Sbjct: 1 atgtttctactttacgaatatgatattttttgggcatttctaataatatccagccttatt 60 Query: 614 cctattttggcattttcgatttcagggcttttag 647 ||||||||| | |||| |||||| ||| |||||| Sbjct: 61 cctattttgacttttttgatttccggggttttag 94
>gb|AY936340.1| Falkia repens NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1715 Score = 115 bits (58), Expect = 2e-22 Identities = 85/94 (90%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||||| |||||||||||||||||||||||| |||||||||||||| | ||||||||| Sbjct: 1 atgtttctactttacgaatatgatattttttgggcatttctaataatatccagccttatt 60 Query: 614 cctattttggcattttcgatttcagggcttttag 647 ||||||||||| |||| ||||| ||| |||||| Sbjct: 61 cctattttggctttttttatttccggggttttag 94
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||| |||||||||||||||||||||||||||||| ||| |||||||||| ||| Sbjct: 54204 ggagtacatctatgtttctgctttacgaatatgatattttctgggcatttctaatgatat 54145 Query: 603 caagccttattcctattttggcattt 628 |||| |||||||||||||||||||| Sbjct: 54144 caagtgttattcctattttggcattt 54119
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct: 53201 ggagtacgtttatgtttctgctttacgaatatgatattttctgggtatttctaataatat 53142 Query: 603 caagccttattcctattttggcattt 628 |||| |||||||||||||||||||| Sbjct: 53141 caagtgttattcctattttggcattt 53116
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||| |||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 54732 ggagttcatctatgtttctgctttacgaatatgatattttctgggcatttctaataatat 54673 Query: 603 caagccttattcctattttggcattt 628 |||| |||||||||||||||||||| Sbjct: 54672 caagtgttattcctattttggcattt 54647
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Plus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 |||||||||||||||||||||||||||||| ||| |||||||||||||| |||| |||| Sbjct: 13812 tatgtttctgctttacgaatatgatattttctgggcatttctaataatatcaagtgttat 13871 Query: 613 tcctattttggcattt 628 |||||||||||||||| Sbjct: 13872 tcctattttggcattt 13887
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 50268 ggagtgcatctatgtttctgctttatgaatatgatattttttgggcatttctaatcatat 50209 Query: 603 caagccttattcctattttggcatttt 629 |||| |||||||||||||||| ||||| Sbjct: 50208 caagtcttattcctattttggtatttt 50182
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | | |||| Sbjct: 52676 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatctatcctt 52617 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 52616 gttcctattttggcatttt 52598
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | | |||| Sbjct: 51756 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatccatcctt 51697 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 51696 gttcctattttggcatttt 51678
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | | |||| Sbjct: 51752 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatccatcctt 51693 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 51692 gttcctattttggcatttt 51674
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | | |||| Sbjct: 51701 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatccatcctt 51642 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 51641 gttcctattttggcatttt 51623
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | | |||| Sbjct: 52674 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatctatcctt 52615 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 52614 gttcctattttggcatttt 52596
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||| ||||||||||||||| |||||||||||||||||| |||||||||| ||| Sbjct: 50267 ggagtgcatctatgtttctgctttatgaatatgatattttttgggcatttctaatcatat 50208 Query: 603 caagccttattcctattttggcatttt 629 |||| |||||||||||||||| ||||| Sbjct: 50207 caagtcttattcctattttggtatttt 50181
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 109 bits (55), Expect = 1e-20 Identities = 73/79 (92%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagcctt 610 ||||||||||||||||||||||||||| |||||||| |||||||||||||| | | |||| Sbjct: 52624 tttatgtttctgctttacgaatatgattttttttgggcatttctaataatatccatcctt 52565 Query: 611 attcctattttggcatttt 629 |||||||||||||||||| Sbjct: 52564 gttcctattttggcatttt 52546
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 107 bits (54), Expect = 5e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||| ||||||||||||| |||||||||||||||| ||| |||||||||| ||| Sbjct: 55206 ggagtacatctatgtttctgcttcacgaatatgatattttctgggcatttctaatgatat 55147 Query: 603 caagccttattcctattttggcattt 628 |||| |||||||||||||||||||| Sbjct: 55146 caagtgttattcctattttggcattt 55121
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 |||||||||||||||||||||||||||||| ||| |||||||||||||| |||| ||| Sbjct: 53821 tatgtttctgctttacgaatatgatattttctgggcatttctaataatatcaagtgctat 53762 Query: 613 tcctattttggcattt 628 |||||||||||||||| Sbjct: 53761 tcctattttggcattt 53746
>gb|AY936336.1| Operculina aequisepala NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1721 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||||| ||||||||||||||| |||||||| |||||||||||||| | ||||||||| Sbjct: 1 atgtttctactttacgaatatgatcttttttgggcatttctaataatatccagccttatt 60 Query: 614 cctattttggcatttt 629 ||||||||||| |||| Sbjct: 61 cctattttggcttttt 76
>gb|AY936344.1| Dinetus truncatus NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1710 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||||| ||||||||||||||| |||||||| |||||||||||||| | | ||||||| Sbjct: 1 atgtttctactttacgaatatgatcttttttgggcatttctaataatatccatccttatt 60 Query: 614 cctattttggcattttcgatttc 636 ||||||||||| |||| |||||| Sbjct: 61 cctattttggcttttttgatttc 83
>gb|AY936338.1| Jacquemontia tamnifolia NdhC (ndhC), NdhK (ndhK), and NdhJ (ndhJ) genes, complete cds; chloroplast Length = 1706 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||||| |||||||||||||||||||||||| |||||||||||||| | ||||| || Sbjct: 1 atgtttctactttacgaatatgatattttttgggcatttctaataatatccagcctgttt 60 Query: 614 cctattttggcattttcgatttc 636 ||||||||||| |||| |||||| Sbjct: 61 cctattttggcttttttgatttc 83
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||| ||||||||||||| |||||||||||||||| ||| |||||||||||||| Sbjct: 51352 ggagtgcatctatgtttctgcttcacgaatatgatattttctgggcatttctaataatat 51293 Query: 603 caagccttattcctattttggcattt 628 |||| | |||||||||||||||||| Sbjct: 51292 caagtgtcattcctattttggcattt 51267
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||| ||||||||| ||||||| |||||||||||||||||| |||||||||||||| Sbjct: 10688 ggagtacttttatgtttttgctttatgaatatgatattttttgggcatttctaataatat 10747 Query: 603 caagccttattcctattttggcattt 628 | | | ||||||| |||||||||||| Sbjct: 10748 cgatctttattccgattttggcattt 10773
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Minus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 |||||||||||||||||||||||||||||| ||| | |||||||||||| |||| |||| Sbjct: 54509 tatgtttctgctttacgaatatgatattttctgggcttttctaataatatcaagtgttat 54450 Query: 613 tcctattttggcatttt 629 ||| ||||||||||||| Sbjct: 54449 tcccattttggcatttt 54433
>gb|U27653.1|LLU27653 Lupinus luteus NADH-plastoquinone oxidoreductase (ndhC) gene, chloroplast gene encoding chloroplast protein, complete cds Length = 363 Score = 95.6 bits (48), Expect = 2e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttatt 613 |||||| |||||||||||||||||||||||||| ||||||||||||| | ||||||||| Sbjct: 1 atgtttttgctttacgaatatgatattttttgggcatttctaataatctcgagccttatt 60 Query: 614 cctattttggcatttt 629 || ||||| ||||||| Sbjct: 61 ccgattttagcatttt 76
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 93.7 bits (47), Expect = 7e-16 Identities = 77/87 (88%) Strand = Plus / Minus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||| ||| ||||||||||||| |||||||||||||||| ||| |||||||| ||||| Sbjct: 50997 ggagtgcatctatgtttctgcttcacgaatatgatattttctgggcatttctactaatat 50938 Query: 603 caagccttattcctattttggcatttt 629 |||| ||||||||||||| ||||||| Sbjct: 50937 caagtgttattcctattttagcatttt 50911 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 tacaccatatctaaatagaat 336 ||||||||||||||||||||| Sbjct: 51190 tacaccatatctaaatagaat 51170
>gb|AC155886.2| Medicago truncatula chromosome 7 BAC clone mth2-173o24, complete sequence Length = 119696 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 543 ggagtacatttatgtttctgctttacgaatatgatattttttggacatttctaataatag 602 ||||||||||||||||| | |||||| ||||||||||||||||| ||||||||||||| Sbjct: 37558 ggagtacatttatgttttttctttacaaatatgatattttttgggtatttctaataatat 37617 Query: 603 caagccttattcctattttggcattt 628 ||| ||||| |||||||||||||| Sbjct: 37618 caattgttattgctattttggcattt 37643
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 87.7 bits (44), Expect = 4e-14 Identities = 68/76 (89%) Strand = Plus / Minus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 |||||||||||||||||||||||||||||| ||| ||||| |||||||| |||| ||| Sbjct: 49426 tatgtttctgctttacgaatatgatattttctgggcatttttaataatatcaagtgctat 49367 Query: 613 tcctattttggcattt 628 |||| ||||||||||| Sbjct: 49366 tcctgttttggcattt 49351
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 ||||||||| ||||| |||||||||||||| ||| ||||| |||||||| |||| |||| Sbjct: 49345 tatgtttctactttatgaatatgatattttctgggcatttttaataatatcaagtgttat 49286 Query: 613 tcctattttggcattt 628 ||||||||| |||||| Sbjct: 49285 tcctattttagcattt 49270
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 553 tatgtttctgctttacgaatatgatattttttggacatttctaataatagcaagccttat 612 |||||||||||||||||||||||||||||| ||| ||||| || ||||| |||| ||| Sbjct: 50364 tatgtttctgctttacgaatatgatattttctgggcatttttactaatatcaagtgctat 50305 Query: 613 tcctattttggcattt 628 |||| ||||||||||| Sbjct: 50304 tcctgttttggcattt 50289
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 75.8 bits (38), Expect = 2e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 430 gtttgaacaaaaaagattcttgtttcaccgaggaaaagaggagaagttctggataaat 487 |||||| ||||| |||||||||||||||||||||||||| ||||||||||||| |||| Sbjct: 486826 gtttgagcaaaagagattcttgtttcaccgaggaaaaga-gagaagttctggagaaat 486770
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 159673 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 159726 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 159727 cattagtcatcctatcttaattaggctctaatt 159759 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaa 278 ||||||||||||||||| ||||||||||||| Sbjct: 159789 tagagattctagagaaaatgagacaaagtgaa 159820
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 75.8 bits (38), Expect = 2e-10 Identities = 79/93 (84%), Gaps = 6/93 (6%) Strand = Plus / Plus Query: 67 gttctgaaatagagttctttatttttatttttatagtattacttctcattatactgcata 126 ||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 43787 gttctgaaatagagttc------tttatttttatagaattactcctcattaggctgcata 43840 Query: 127 gattagtcctactatcttaattaggttctaatt 159 ||||||| | |||||||||||||| ||||||| Sbjct: 43841 cattagtcatcctatcttaattaggctctaatt 43873 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Plus Query: 247 tagagattctagagaaagcgagacaaagtgaa 278 ||||||||||||||||| ||||||||||||| Sbjct: 43903 tagagattctagagaaaatgagacaaagtgaa 43934
>gb|U72654.1|EGU72654 Eustoma grandiflorum flavonoid 3'5'-hydroxylase (F3'5'H) mRNA, complete cds Length = 2124 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataata 601 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1985 atgtttctgatttacaaatatgattttttttggacatttctaataata 2032
>dbj|D14589.1| Eustoma russellianum mRNA for flavonoid 3',5'-hydroxylase, complete cds Length = 2174 Score = 71.9 bits (36), Expect = 3e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 554 atgtttctgctttacgaatatgatattttttggacatttctaataata 601 ||||||||| ||||| |||||||| ||||||||||||||||||||||| Sbjct: 1982 atgtttctgatttacaaatatgattttttttggacatttctaataata 2029
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 551 tttatgtttctgctttacgaatatgatattttttggacatttctaataata 601 |||||||||||| || ||||||||||| |||| ||| ||||| |||||||| Sbjct: 51314 tttatgtttctgtttcacgaatatgatcttttctgggcatttataataata 51264
>emb|CR628334.9| Zebrafish DNA sequence from clone CH211-175F11 in linkage group 17, complete sequence Length = 147890 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 139 tatcttaattaggttctaattattctaattagtagta 175 |||||||||||||| ||||||| ||| |||||||||| Sbjct: 136939 tatcttaattaggtactaattactcttattagtagta 136903
>gb|AC140211.2| Mus musculus BAC clone RP24-474M1 from chromosome 14, complete sequence Length = 159577 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttatagta 104 |||||||||||||||||||||||| Sbjct: 41279 ttctttatttttatttttatagta 41256
>gb|AC131100.3| Mus musculus BAC clone RP23-43H7 from chromosome 14, complete sequence Length = 200247 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttatagta 104 |||||||||||||||||||||||| Sbjct: 157189 ttctttatttttatttttatagta 157166
>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 Length = 340000 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 84 tttatttttatttttatagtatta 107 |||||||||||||||||||||||| Sbjct: 179704 tttatttttatttttatagtatta 179681
>gb|AF064861.5| Homo sapiens chromosome 21 clone RP1-128M19 map q22.2, complete sequence Length = 135578 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 84 tttatttttatttttatagtatta 107 |||||||||||||||||||||||| Sbjct: 61901 tttatttttatttttatagtatta 61878
>gb|AC131888.1| Homo sapiens chromosome 16 clone RP11-626G3, complete sequence Length = 162957 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 77 agagttctttatttttatttttat 100 |||||||||||||||||||||||| Sbjct: 101728 agagttctttatttttatttttat 101751
>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete sequence Length = 204622 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Plus Query: 84 tttatttttatttttatagtatta 107 |||||||||||||||||||||||| Sbjct: 96114 tttatttttatttttatagtatta 96137
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaa 278 ||||||||||||||||| ||||||||||||| Sbjct: 8142769 tagagattctagagaaaatgagacaaagtgaa 8142738 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ttaattaggttctaattatt 162 |||||||||||||||||||| Sbjct: 8142826 ttaattaggttctaattatt 8142807
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0503B05 Length = 156814 Score = 48.1 bits (24), Expect = 0.036 Identities = 30/32 (93%) Strand = Plus / Minus Query: 247 tagagattctagagaaagcgagacaaagtgaa 278 ||||||||||||||||| ||||||||||||| Sbjct: 130962 tagagattctagagaaaatgagacaaagtgaa 130931 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 143 ttaattaggttctaattatt 162 |||||||||||||||||||| Sbjct: 131019 ttaattaggttctaattatt 131000
>dbj|BS000156.1| Pan troglodytes chromosome 22 clone:RP43-145H09, map 22, complete sequences Length = 152714 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 84 tttatttttatttttatagtatta 107 |||||||||||||||||||||||| Sbjct: 65037 tttatttttatttttatagtatta 65014
>emb|AL954225.2|PTB448G23 Pan troglodytes chromosome 22 BAC PTB-448G23, complete sequence Length = 173384 Score = 48.1 bits (24), Expect = 0.036 Identities = 24/24 (100%) Strand = Plus / Minus Query: 84 tttatttttatttttatagtatta 107 |||||||||||||||||||||||| Sbjct: 31792 tttatttttatttttatagtatta 31769
>gb|AC005995.3| Homo sapiens PAC clone RP1-42M2 from 7, complete sequence Length = 80010 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 84 tttatttttatttttatagtatt 106 ||||||||||||||||||||||| Sbjct: 34924 tttatttttatttttatagtatt 34946
>emb|BX897684.8| Zebrafish DNA sequence from clone CH211-107A4 in linkage group 7, complete sequence Length = 147920 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 153 tctaattattctaattagtagtattct 179 ||||||||||||||||| ||||||||| Sbjct: 115750 tctaattattctaattactagtattct 115724
>gb|AC104806.3| Homo sapiens BAC clone RP11-584P21 from 4, complete sequence Length = 147777 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 81 ttctttatttttatttttatagtatta 107 ||||||||||||||||||||| ||||| Sbjct: 144807 ttctttatttttatttttatattatta 144781
>gb|AC131206.2| Homo sapiens 12 BAC RP11-157G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177260 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 84 tttatttttatttttatagtattactt 110 |||||||||||||| |||||||||||| Sbjct: 20889 tttatttttattttaatagtattactt 20915
>emb|BX119982.8| Zebrafish DNA sequence from clone CH211-214J4 in linkage group 23, complete sequence Length = 210702 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 76 tagagttctttatttttatttttatag 102 ||||||| ||||||||||||||||||| Sbjct: 190328 tagagttttttatttttatttttatag 190354
>emb|AL645926.16| Zebrafish DNA sequence from clone RP71-1G24, complete sequence Length = 141213 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 271 aaagtgaaacgataaagttttct 293 ||||||||||||||||||||||| Sbjct: 10955 aaagtgaaacgataaagttttct 10933
>gb|AY853472.1| Marsupenaeus japonicus isolate ZJ27 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 tattattattaaatagtaaata 222 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853469.1| Marsupenaeus japonicus isolate TW11 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 tattattattaaatagtaaata 222 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853467.1| Marsupenaeus japonicus isolate TW7 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 tattattattaaatagtaaata 222 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853460.1| Marsupenaeus japonicus isolate HK6 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 tattattattaaatagtaaata 222 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853456.1| Marsupenaeus japonicus isolate CB6 control region, partial sequence; mitochondrial Length = 504 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 tattattattaaatagtaaata 222 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>gb|AY853453.1| Marsupenaeus japonicus isolate CA10 control region, partial sequence; mitochondrial Length = 505 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 201 tattattattaaatagtaaata 222 |||||||||||||||||||||| Sbjct: 26 tattattattaaatagtaaata 47
>emb|AL593844.4| Human DNA sequence from clone RP11-406O16 on chromosome 6 Contains the 3' part of a novel gene, complete sequence Length = 157929 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttatag 102 |||||||||||||||||||||| Sbjct: 71068 ttctttatttttatttttatag 71047
>emb|AL451010.4| Human DNA sequence from clone RP11-163M2 on chromosome 1 Contains a novel gene, a pseudogene similar to part of actin, beta (ACTB), the GLMN gene for glomulin, FKBP associated protein and a novel gene (FLJ13150), complete sequence Length = 184144 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 20514 agttctttatttttatttttat 20493
>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence Length = 166245 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 133468 agttctttatttttatttttat 133489
>gb|AC011726.11| Homo sapiens chromosome , clone RP11-14I17, complete sequence Length = 170074 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 167590 agttctttatttttatttttat 167569
>gb|AC161766.2| Mus musculus BAC clone RP23-39O12 from chromosome 12, complete sequence Length = 224641 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 75373 agttctttatttttatttttat 75352
>emb|AL645570.13| Mouse DNA sequence from clone RP23-377H12 on chromosome 11 Contains two novel genes, the 3' end of the Meis1 gene for myeloid ecotropic viral integration site 1 and two CpG islands, complete sequence Length = 190198 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 82 tctttatttttatttttatagt 103 |||||||||||||||||||||| Sbjct: 150995 tctttatttttatttttatagt 150974
>emb|BX546473.10| Zebrafish DNA sequence from clone DKEYP-51F2 in linkage group 3, complete sequence Length = 211253 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Minus Query: 81 ttctttatttttatttttatagtatt 106 |||||||||||||||||||| ||||| Sbjct: 56814 ttctttatttttatttttattgtatt 56789
>gb|AC012630.7| Homo sapiens chromosome 5 clone CTD-2158F3, complete sequence Length = 70065 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 16563 agttctttatttttatttttat 16584
>gb|AC015743.9| Homo sapiens chromosome 8, clone RP11-1G11, complete sequence Length = 193989 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 12511 agttctttatttttatttttat 12490
>dbj|AK138515.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330048D04 product:unclassifiable, full insert sequence Length = 3675 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 82 tctttatttttatttttatagt 103 |||||||||||||||||||||| Sbjct: 2283 tctttatttttatttttatagt 2304
>gb|AF349019.1|F349018S02 Homo sapiens topoisomerase I gene, exon 2; nuclear gene for mitochondrial product Length = 2975 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 308 agttctttatttttatttttat 329
>gb|AC153923.4| Mus musculus 6 BAC RP23-82I13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 248275 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 227022 agttctttatttttatttttat 227043
>gb|AC021001.5|AC021001 Homo sapiens chromosome 8, clone RP11-419L20, complete sequence Length = 175742 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 91 ttatttttatagtattacttctcatt 116 ||||||||||| |||||||||||||| Sbjct: 145452 ttatttttataatattacttctcatt 145477
>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence Length = 179941 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 3473 agttctttatttttatttttat 3452
>gb|AC012370.8| Homo sapiens BAC clone RP11-568D19 from 2, complete sequence Length = 105362 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 78890 agttctttatttttatttttat 78911
>gb|AC067838.18| Homo sapiens chromosome 8, clone RP11-722E23, complete sequence Length = 104120 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 31343 agttctttatttttatttttat 31364
>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence Length = 124060 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 82823 agttctttatttttatttttat 82802
>gb|AC010200.8| Homo sapiens 12 BAC RP11-575G13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 158149 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttatag 102 |||||||||||||||||||||| Sbjct: 110707 ttctttatttttatttttatag 110686
>emb|Z98941.2|HS204E5 Human DNA sequence from clone XX-204E5 on chromosome 12, complete sequence Length = 129192 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 125797 agttctttatttttatttttat 125776
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 167 ttagtagtattctcatttttatttaa 192 ||||| |||||||||||||||||||| Sbjct: 2577204 ttagttgtattctcatttttatttaa 2577229 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 82 tctttatttttatttttatagtatt 106 ||||||| ||||||||||||||||| Sbjct: 2271290 tctttatatttatttttatagtatt 2271314
>gb|AC090015.6| Homo sapiens 12 BAC RP11-711C17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186236 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 177693 agttctttatttttatttttat 177672
>dbj|AP003083.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-179B7, complete sequence Length = 161488 Score = 44.1 bits (22), Expect = 0.57 Identities = 25/26 (96%) Strand = Plus / Plus Query: 75 atagagttctttatttttatttttat 100 ||||| |||||||||||||||||||| Sbjct: 96507 atagatttctttatttttatttttat 96532
>emb|CT025738.5| Mouse DNA sequence from clone RP24-378G24 on chromosome 12, complete sequence Length = 182200 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 5447 agttctttatttttatttttat 5468
>emb|Y12853.1|HSP2X748 Homo sapiens P2X7 gene, exon 4-8 Length = 11266 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 4341 agttctttatttttatttttat 4320
>gb|AC091144.12| Homo sapiens chromosome 8, clone RP11-359B20, complete sequence Length = 185872 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 79 agttctttatttttatttttat 100 |||||||||||||||||||||| Sbjct: 182993 agttctttatttttatttttat 182972
>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01, complete sequence Length = 122768 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 tgtttgaacaaaaaagattct 449 ||||||||||||||||||||| Sbjct: 116111 tgtttgaacaaaaaagattct 116091
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 484317 gttctttatttttatttttat 484337
>gb|AF487277.1| Lecanicillium muscarium, complete genome Length = 24499 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 86 tatttttatttttatagtatt 106 ||||||||||||||||||||| Sbjct: 3271 tatttttatttttatagtatt 3251
>gb|AY341443.1| Phaseolus vulgaris cultivar Sprite BAC 78L17, partial sequence Length = 106592 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ttatttttatttttatagtat 105 ||||||||||||||||||||| Sbjct: 5161 ttatttttatttttatagtat 5141
>ref|NM_008091.2| Mus musculus GATA binding protein 3 (Gata3), mRNA Length = 2853 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 2792 ctttattattatttttatagtatta 2768
>gb|AC119839.8| Mus musculus chromosome 1, clone RP24-170N13, complete sequence Length = 165405 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 tttatttttatttttatagta 104 ||||||||||||||||||||| Sbjct: 82104 tttatttttatttttatagta 82124
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 379677 gttctttatttttatttttat 379657
>emb|CR932579.1|CNS0KYB9 Paramecium tetraurelia, Small GTPase rab, putative, complete gene Length = 3001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 aaatagaatggaaatccaaaa 348 ||||||||||||||||||||| Sbjct: 1827 aaatagaatggaaatccaaaa 1847
>emb|CT009545.5| M.truncatula DNA sequence from clone MTH2-107B14 on chromosome 3, complete sequence Length = 96467 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 ctttatttttatttttatagt 103 ||||||||||||||||||||| Sbjct: 7145 ctttatttttatttttatagt 7165
>gb|AC092920.7| Homo sapiens 3 BAC RP11-255G21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164878 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 59312 gttctttatttttatttttat 59332
>emb|CR407590.7| Zebrafish DNA sequence from clone CH211-153N15 in linkage group 2, complete sequence Length = 176623 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 84 tttatttttatttttatagta 104 ||||||||||||||||||||| Sbjct: 32665 tttatttttatttttatagta 32645
>gb|AC116592.5| Mus musculus BAC clone RP24-90K3 from 2, complete sequence Length = 238657 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 74882 ctttattattatttttatagtatta 74858
>gb|DP000044.2| Callithrix jacchus target 106 genomic scaffold Length = 574594 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 287 gttttctttatataagaatta 307 ||||||||||||||||||||| Sbjct: 345801 gttttctttatataagaatta 345781
>emb|CR847884.6| Zebrafish DNA sequence from clone CH211-161H23 in linkage group 1, complete sequence Length = 157311 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 428 ttgtttgaacaaaaaagattcttgtttca 456 |||| ||||||||||||||| |||||||| Sbjct: 74390 ttgtatgaacaaaaaagatttttgtttca 74418
>gb|AC149804.11| Medicago truncatula clone mth2-73h22, complete sequence Length = 121763 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 ataaagttttctttatataag 302 ||||||||||||||||||||| Sbjct: 48672 ataaagttttctttatataag 48652
>emb|AL732325.6| Human DNA sequence from clone RP11-692N21 on chromosome X Contains part of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85), complete sequence Length = 96764 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 14551 ttctttatttttatttttata 14531
>emb|AL512385.10| Human DNA sequence from clone RP11-252E3 on chromosome 6 Contains part of the gene KIAA0319 and a keratin 8 (KRT8) pseudogene, complete sequence Length = 28692 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 492 aatgctgaattgaattgacta 512 ||||||||||||||||||||| Sbjct: 11498 aatgctgaattgaattgacta 11478
>emb|AL445205.14| Human DNA sequence from clone RP11-24J23 on chromosome 1 Contains a novel gene (FLJ38972), the 3' end of the ROR1 gene for receptor tyrosine kinase-like orphan receptor 1, the 5' end of gene MGC35130 and a CpG island, complete sequence Length = 115936 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 19594 ttctttatttttatttttata 19614
>emb|AL357519.19| Human DNA sequence from clone RP11-367G18 on chromosome 6 Contains a putative novel gene and a ubiquitin/ ribosomal protein S27A (RPS27A) fusion protein pseudogene, complete sequence Length = 157021 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 agttctttatttttatttttatagt 103 |||||||||||| |||||||||||| Sbjct: 135890 agttctttatttctatttttatagt 135866
>gb|AC083928.11| Homo sapiens chromosome 8, clone RP11-77C4, complete sequence Length = 144023 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 attagtagtattctcatttttattt 190 |||| |||||||||||||||||||| Sbjct: 33716 attattagtattctcatttttattt 33692
>emb|AL353652.17| Human DNA sequence from clone RP11-279F15 on chromosome 13 Contains a CpG island, complete sequence Length = 126837 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 38454 ttctttatttttatttttata 38434
>emb|AL354661.14| Human DNA sequence from clone RP11-386D8 on chromosome 9 Contains the gene for a novel olfactory (seven transmembrane helix) receptor and the 3' end of the gene for a novel protein (including KIAA0368), complete sequence Length = 138069 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 75436 gttctttatttttatttttat 75416
>gb|AC160026.2| Pan troglodytes BAC clone CH251-166J6 from chromosome unknown, complete sequence Length = 172151 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 tagagttctttatttttatttttat 100 |||| |||||||||||||||||||| Sbjct: 103551 tagacttctttatttttatttttat 103527
>emb|AL139341.9| Human DNA sequence from clone RP11-99N20 on chromosome 10 Contains the 5' end of a novel gene, the gene for glutathione transferase omega 1 (GSTO1), the 5' end of a variant of the gene for a novel glutathione-S-transferase and two CpG islands, complete sequence Length = 104378 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gagttctttatttttattttt 98 ||||||||||||||||||||| Sbjct: 7672 gagttctttatttttattttt 7652
>emb|AL096855.48|HS1115A15 Human DNA sequence from clone RP5-1115A15 on chromosome 1p36.11-36.31 Contains part of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458, FLJ38775), a novel gene and a CpG island, complete sequence Length = 178403 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 77711 gttctttatttttatttttat 77691
>emb|AL024507.7|HS191J18 Human DNA sequence from clone RP1-191J18 on chromosome 6q16.1-22.33 Contains the SEC63 gene for SEC63-like (S. cerevisiae), a 60S ribosomal protein 23A (RPL23A) pseudogene, a ribosomal protein L14 (RPL14) pseudogene, a pseudogene similar to part of methylene tetrahydrofolate dehydrogenase (NAD+ dependent), methenyltetrahydrofolate cyclohydrolase (MTHFD2) (NMDMC) and three CpG islands, complete sequence Length = 152408 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 tagagttctttatttttatttttat 100 |||| |||||||||||||||||||| Sbjct: 54834 tagacttctttatttttatttttat 54858
>emb|AL031737.2|HS8B22 Human DNA sequence from clone RP1-8B22 on chromosome 1p35.1-36.21 Contains a dynein, cytoplasmic light chain 1 (DNCL1) pseudogene, complete sequence Length = 133760 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 12935 gttctttatttttatttttat 12955
>emb|CR942205.4| Human DNA sequence from clone RP11-948M1 on chromosome 6, complete sequence Length = 176819 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 aatgctgaattgaattgacta 512 ||||||||||||||||||||| Sbjct: 93934 aatgctgaattgaattgacta 93954
>gb|AC107394.3| Homo sapiens BAC clone RP11-617I14 from 4, complete sequence Length = 170971 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 tagagttctttatttttatttttat 100 ||||||| ||||||||||||||||| Sbjct: 111147 tagagttgtttatttttatttttat 111171
>emb|AL162508.1|ATT7H20 Arabidopsis thaliana DNA chromosome 5, BAC clone T7H20 (ESSA project) Length = 87581 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 79 agttctttatttttatttttatagt 103 |||| |||||||||||||||||||| Sbjct: 79440 agttttttatttttatttttatagt 79464
>emb|CR925830.3| Human DNA sequence from clone RP11-195J19 on chromosome 6, complete sequence Length = 167847 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 492 aatgctgaattgaattgacta 512 ||||||||||||||||||||| Sbjct: 99959 aatgctgaattgaattgacta 99979
>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence Length = 188410 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 tatttttatagtattacttct 112 ||||||||||||||||||||| Sbjct: 185866 tatttttatagtattacttct 185846
>gb|BC062915.1| Mus musculus GATA binding protein 3, mRNA (cDNA clone MGC:85992 IMAGE:6826352), complete cds Length = 2853 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 2792 ctttattattatttttatagtatta 2768
>gb|AC115720.4| Homo sapiens chromosome 8, clone CTD-2015J21, complete sequence Length = 98067 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 tatttttatagtattacttct 112 ||||||||||||||||||||| Sbjct: 20657 tatttttatagtattacttct 20677
>dbj|AK124590.1| Homo sapiens cDNA FLJ42599 fis, clone BRACE3010416 Length = 4178 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 603 gttctttatttttatttttat 623
>gb|AC144473.8| Medicago truncatula clone mth2-15l5, complete sequence Length = 128860 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 ctttatttttatttttatagt 103 ||||||||||||||||||||| Sbjct: 101237 ctttatttttatttttatagt 101257
>gb|AC126779.19| Medicago truncatula clone mth2-34m14, complete sequence Length = 128856 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 84 tttatttttatttttatagtattac 108 ||||||||||||||||||| ||||| Sbjct: 41010 tttatttttatttttatagaattac 40986
>gb|DQ400123.1|DQ400116S8 Mus musculus strain C3H/HeJ GATA binding protein 3 (Gata3) gene, exon 6 and complete cds Length = 2463 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 1682 ctttattattatttttatagtatta 1658
>gb|DQ400115.1|DQ400108S8 Mus musculus strain A/J GATA binding protein 3 (Gata3) gene, exon 6 and complete cds Length = 2463 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 1682 ctttattattatttttatagtatta 1658
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 agttctttatttttattttta 99 ||||||||||||||||||||| Sbjct: 1361350 agttctttatttttattttta 1361330
>gb|AC079178.20| Homo sapiens Xp BAC RP11-702C7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114665 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 193 tagtctcttattattattaaa 213 ||||||||||||||||||||| Sbjct: 111324 tagtctcttattattattaaa 111304
>gb|AC093416.2| Homo sapiens chromosome 3 clone RP11-659P16, complete sequence Length = 189308 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 76 tagagttctttatttttatttttat 100 ||||||| ||||||||||||||||| Sbjct: 127918 tagagttttttatttttatttttat 127894
>gb|AC021393.10| Homo sapiens chromosome 8, clone RP11-27P7, complete sequence Length = 150858 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 571 atatgatattttttggacatttctaataa 599 |||||||||||| |||||||| ||||||| Sbjct: 30448 atatgatattttatggacattactaataa 30476
>gb|AC079238.7| Homo sapiens BAC clone RP11-719L21 from 4, complete sequence Length = 142462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 3878 ttctttatttttatttttata 3858
>dbj|AK157939.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930010J11 product:GATA binding protein 3, full insert sequence Length = 3079 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 3061 ctttattattatttttatagtatta 3037
>gb|AC022558.9| Homo sapiens chromosome 15, clone RP11-90B9, complete sequence Length = 186403 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 atagagttctttatttttattttta 99 |||||||| |||||||||||||||| Sbjct: 59061 atagagttttttatttttattttta 59085
>gb|AC163757.5| Pan troglodytes BAC clone CH251-272C9 from chromosome unknown, complete sequence Length = 169213 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 gagttctttatttttattttt 98 ||||||||||||||||||||| Sbjct: 114525 gagttctttatttttattttt 114505
>emb|BX296554.9| Zebrafish DNA sequence from clone DKEYP-30G1 in linkage group 5, complete sequence Length = 126703 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 atagagttctttatttttattttta 99 |||||||||||| |||||||||||| Sbjct: 89426 atagagttctttttttttattttta 89450
>gb|AC073333.5| Homo sapiens BAC clone RP11-455J15 from 7, complete sequence Length = 165616 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 68561 gttctttatttttatttttat 68581
>gb|AC159019.4| Pan troglodytes BAC clone CH251-550K12 from chromosome unknown, complete sequence Length = 196429 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 76 tagagttctttatttttatttttat 100 |||| |||||||||||||||||||| Sbjct: 179062 tagacttctttatttttatttttat 179086
>gb|AC149359.2| Phakopsora pachyrhizi clone JGIAFNA-41F17, complete sequence Length = 40870 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 1879 gttctttatttttatttttat 1859
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 gggagtacatttatgtttctg 562 ||||||||||||||||||||| Sbjct: 13120333 gggagtacatttatgtttctg 13120353
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 tgtttgaacaaaaaagattct 449 ||||||||||||||||||||| Sbjct: 1160500 tgtttgaacaaaaaagattct 1160480 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 26776383 ttctttatttttatttttat 26776364
>gb|AC139143.5| Homo sapiens chromosome 11, clone CTD-3008O6, complete sequence Length = 55001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 49227 ttctttatttttatttttata 49207
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 162425 gttctttatttttatttttat 162405
>gb|AC084650.1|CBRG45N14 Caenorhabditis briggsae cosmid G45N14, complete sequence Length = 41442 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 ttatttttatttttatagtat 105 ||||||||||||||||||||| Sbjct: 8160 ttatttttatttttatagtat 8140
>gb|AC011510.7|AC011510 Homo sapiens chromosome 19 clone CTD-2195B23, complete sequence Length = 129402 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 6149 gttctttatttttatttttat 6129
>gb|AC068580.23| Homo sapiens chromosome 11, clone RP11-295K3, complete sequence Length = 120298 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 11885 ttctttatttttatttttata 11865
>gb|AC124069.7| Homo sapiens chromosome 8, clone RP11-326L2, complete sequence Length = 174025 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 168841 ttctttatttttatttttata 168821
>gb|AC027117.6| Homo sapiens chromosome 8, clone RP11-806O11, complete sequence Length = 160223 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 71340 ttctttatttttatttttata 71360
>dbj|AP005728.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0048A13 Length = 137680 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 542 gggagtacatttatgtttctg 562 ||||||||||||||||||||| Sbjct: 42423 gggagtacatttatgtttctg 42443
>emb|BX571798.5| Zebrafish DNA sequence from clone DKEY-199I24 in linkage group 18, complete sequence Length = 108129 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 193 tagtctcttattattattaaa 213 ||||||||||||||||||||| Sbjct: 64123 tagtctcttattattattaaa 64143
>emb|AL929210.4| Zebrafish DNA sequence from clone CH211-142E15, complete sequence Length = 168383 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 ttattattattaaatagtaaataaa 224 |||||||||||||||| |||||||| Sbjct: 90952 ttattattattaaataataaataaa 90976
>gb|AC125319.5| Mus musculus BAC clone RP23-472L3 from 5, complete sequence Length = 186202 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 gttctttatttttatttttat 100 ||||||||||||||||||||| Sbjct: 137802 gttctttatttttatttttat 137782
>dbj|AP006249.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-383B10, complete sequence Length = 195290 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 134891 ttctttatttttatttttata 134871
>emb|CT476832.2| Pig DNA sequence from clone XX-BE284E13 on chromosome 11, complete sequence Length = 180778 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 187 atttaatagtctcttattattatta 211 |||||||||||| |||||||||||| Sbjct: 60465 atttaatagtcttttattattatta 60489
>gb|AC159036.3| Pan troglodytes BAC clone CH251-318E5 from chromosome unknown, complete sequence Length = 156920 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 gagttctttatttttattttt 98 ||||||||||||||||||||| Sbjct: 103196 gagttctttatttttattttt 103216
>emb|CR956434.13| M.truncatula DNA sequence from clone MTH2-35N9 on chromosome 3, complete sequence Length = 113074 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 78 gagttctttatttttatttttatag 102 ||||| ||||||||||||||||||| Sbjct: 18407 gagttttttatttttatttttatag 18383
>emb|AL845529.10| Mouse DNA sequence from clone RP23-276D17 on chromosome 2, complete sequence Length = 166971 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 ctttatttttatttttatagtatta 107 ||||||| ||||||||||||||||| Sbjct: 145166 ctttattattatttttatagtatta 145190
>emb|AL513424.3|HS109M15 Homo sapiens chromosome 9 BAC RP11-109M15, complete sequence Length = 184365 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 481 gataaattgacaatgctgaat 501 ||||||||||||||||||||| Sbjct: 126071 gataaattgacaatgctgaat 126091
>emb|BX005010.24| Zebrafish DNA sequence from clone DKEY-8F16 in linkage group 17, complete sequence Length = 236557 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 139 tatcttaattaggttctaattattctaattagtagta 175 |||||||||||||| ||||||| ||| ||||||||| Sbjct: 4522 tatcttaattaggtactaattactcttgttagtagta 4558
>dbj|AP004928.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT01G01, TM0081b, complete sequence Length = 44292 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 75 atagagttctttatttttattttta 99 ||||| ||||||||||||||||||| Sbjct: 7784 atagatttctttatttttattttta 7760
>dbj|AP004526.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT05E07, TM0055, complete sequence Length = 94516 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 376 aatctttaaagaagatgcagc 396 ||||||||||||||||||||| Sbjct: 14551 aatctttaaagaagatgcagc 14531
>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02, complete sequence Length = 90509 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 429 tgtttgaacaaaaaagattct 449 ||||||||||||||||||||| Sbjct: 10786 tgtttgaacaaaaaagattct 10766
>dbj|AB020865.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular colorectal and non-small cell lung cancer , segment 8/11 Length = 100000 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttata 101 ||||||||||||||||||||| Sbjct: 35753 ttctttatttttatttttata 35733
>gb|CP000025.1| Campylobacter jejuni RM1221, complete genome Length = 1777831 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 1066731 ttctttatttttatttttat 1066712
>gb|AC108429.11| Mus musculus chromosome 7, clone RP23-161B5, complete sequence Length = 186903 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 84 tttatttttatttttatagtatta 107 |||||||||||||||||| ||||| Sbjct: 17550 tttatttttatttttatattatta 17573
>gb|AC099637.7| Mus musculus chromosome 1, clone RP24-257C20, complete sequence Length = 169573 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 143366 ttctttatttttatttttat 143385
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 tttttatagtattacttctcatta 117 |||||||||||| ||||||||||| Sbjct: 69401 tttttatagtatcacttctcatta 69378
>gb|AC154221.3| Mus musculus BAC clone RP24-373L7 from chromosome 13, complete sequence Length = 157332 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tattattaaatagtaaataa 223 |||||||||||||||||||| Sbjct: 90125 tattattaaatagtaaataa 90106
>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence Length = 244565 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 agagttctttatttttatttttat 100 |||| ||||||||||||||||||| Sbjct: 117071 agagatctttatttttatttttat 117094
>gb|AY796203.1| Homo sapiens cytochrome P450, family 2, subfamily C, polypeptide 19 (CYP2C19) gene, complete cds Length = 94219 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 55553 ttctttatttttatttttat 55572
>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete sequence Length = 258658 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 155118 ttctttatttttatttttat 155099
>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete sequence Length = 252394 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 143371 ttctttatttttatttttat 143352 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 71191 ttctttatttttatttttat 71210
>gb|AE014825.1| Plasmodium falciparum 3D7 chromosome 14 section 10 of 13 of the complete sequence Length = 250053 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 14920 ttctttatttttatttttat 14939
>gb|AF071484.1|AH007067S07 Homo sapiens potassium channel (KCNQ3) gene, exon 8 Length = 1035 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 1011 ttctttatttttatttttat 992
>gb|AC158966.5| Mus musculus chromosome 1, clone RP23-382I8, complete sequence Length = 183519 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 94041 ttctttatttttatttttat 94060
>gb|AC165138.6| Mus musculus chromosome 15, clone RP24-61P10, complete sequence Length = 170282 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 6464 ttctttatttttatttttat 6483
>gb|AE001403.1| Plasmodium falciparum 3D7 chromosome 2 section 40 of 73 of the complete sequence Length = 13684 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 2889 ttctttatttttatttttat 2870
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 1683202 ttctttatttttatttttat 1683221
>gb|AC005368.1| Homo sapiens chromosome 5, BAC clone 194j18 (LBNL H158), complete sequence Length = 118995 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 11050 ttctttatttttatttttat 11031
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 4256 ttctttatttttatttttat 4275
>gb|AC159439.1| Trypanosoma brucei chromosome 7 clone RPCI93-2F2, complete sequence Length = 134290 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 99509 ttctttatttttatttttat 99528
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 58322 ttctttatttttatttttat 58303
>gb|AC133871.13| Mus musculus chromosome 1, clone RP24-414I11, complete sequence Length = 203423 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 152 ttctaattattctaattagt 171 |||||||||||||||||||| Sbjct: 116326 ttctaattattctaattagt 116345
>gb|AC102460.13| Mus musculus chromosome 3, clone RP24-318G1, complete sequence Length = 197362 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 tctttatttttatttttata 101 |||||||||||||||||||| Sbjct: 88660 tctttatttttatttttata 88641
>gb|AC132266.4| Mus musculus BAC clone RP24-380L14 from chromosome 10, complete sequence Length = 176497 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aatagagttctttattttta 93 |||||||||||||||||||| Sbjct: 24574 aatagagttctttattttta 24555
>gb|AC164700.3| Mus musculus BAC clone RP24-548M16 from chromosome 5, complete sequence Length = 212172 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 162040 ttctttatttttatttttat 162021
>gb|AC163655.3| Mus musculus BAC clone RP23-264P21 from chromosome 6, complete sequence Length = 185583 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 79693 ttctttatttttatttttat 79712
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 14623 ttctttatttttatttttat 14604
>gb|AC102440.12| Mus musculus chromosome 1, clone RP24-146C18, complete sequence Length = 144770 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 197 ctcttattattattaaatagtaaa 220 ||||||||||||||||||| |||| Sbjct: 34830 ctcttattattattaaatattaaa 34853
>gb|AC124323.10| Mus musculus chromosome 19, clone RP24-444B6, complete sequence Length = 150803 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 tttgaacaaaaaagattctt 450 |||||||||||||||||||| Sbjct: 61726 tttgaacaaaaaagattctt 61745
>gb|AC159376.12| Mus musculus 10 BAC RP23-114N21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223292 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 43333 ttctttatttttatttttat 43352
>gb|AC118069.8| Rattus norvegicus 9 BAC CH230-343O14 (Children's Hospital Oakland Research Institute) complete sequence Length = 179244 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 66306 ttctttatttttatttttat 66287
>gb|AC102999.7| Rattus norvegicus 7 BAC CH230-33J22 (Children's Hospital Oakland Research Institute) complete sequence Length = 209654 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 394 agcacagaggaaacaaaggctaaa 417 |||||| ||||||||||||||||| Sbjct: 143431 agcacacaggaaacaaaggctaaa 143408
>gb|AY531391.1| Schizaphis graminum mitochondrion, complete genome Length = 15721 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 ttattattattaaatagtaaataa 223 |||||||||||||||| ||||||| Sbjct: 5945 ttattattattaaataataaataa 5968
>gb|AC183963.2| Pan troglodytes BAC clone CH251-562F21 from chromosome 17, complete sequence Length = 213058 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 153825 ttctttatttttatttttat 153806
>gb|AC183964.3| Pan troglodytes BAC clone CH251-654L7 from chromosome 12, complete sequence Length = 213075 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 tctcttattattattaaatagtaa 219 ||||||||||||||| |||||||| Sbjct: 110687 tctcttattattattgaatagtaa 110664
>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence Length = 188992 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 569 gaatatgatattttttggacattt 592 ||||| |||||||||||||||||| Sbjct: 181807 gaataagatattttttggacattt 181830
>gb|AE006654.1| Sulfolobus solfataricus P2 section 13 of 272 of the complete genome Length = 11376 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 ttatttttatagtattactt 110 |||||||||||||||||||| Sbjct: 1046 ttatttttatagtattactt 1065
>gb|AY312507.1| Thelohania solenopsae isolate LA 2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 318 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttttctttatataagaatta 307 |||||||||||||||||||| Sbjct: 146 ttttctttatataagaatta 165
>gb|AY312506.1| Thelohania solenopsae isolate Florida small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 339 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttttctttatataagaatta 307 |||||||||||||||||||| Sbjct: 157 ttttctttatataagaatta 176
>gb|AY312505.1| Thelohania solenopsae isolate Texas 3430 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 317 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttttctttatataagaatta 307 |||||||||||||||||||| Sbjct: 139 ttttctttatataagaatta 158
>gb|AY312504.1| Thelohania solenopsae isolate Texas 3427 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 330 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttttctttatataagaatta 307 |||||||||||||||||||| Sbjct: 156 ttttctttatataagaatta 175
>gb|AY312503.1| Thelohania solenopsae isolate Texas 3344 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 283 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttttctttatataagaatta 307 |||||||||||||||||||| Sbjct: 132 ttttctttatataagaatta 151
>gb|AY312502.1| Thelohania solenopsae isolate Texas 3362 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence Length = 1726 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 288 ttttctttatataagaatta 307 |||||||||||||||||||| Sbjct: 1236 ttttctttatataagaatta 1255
>ref|XM_716710.1| Candida albicans SC5314 putative U3 snoRNP protein Utp20p fragment (CaO19_1732), mRNA Length = 1863 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 tgaattgactaatttaagtt 521 |||||||||||||||||||| Sbjct: 1596 tgaattgactaatttaagtt 1615
>ref|XM_716590.1| Candida albicans SC5314 putative U3 snoRNP protein Utp20p fragment (CaO19_9300), mRNA Length = 1863 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 tgaattgactaatttaagtt 521 |||||||||||||||||||| Sbjct: 1596 tgaattgactaatttaagtt 1615
>gb|AC132595.3| Mus musculus BAC clone RP24-229G7 from chromosome 7, complete sequence Length = 155547 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 139549 ttctttatttttatttttat 139568
>gb|AC149031.1| Rhinolophus ferrumequinum clone VMRC7-44G7, complete sequence Length = 192138 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 45351 ttctttatttttatttttat 45332
>gb|AC087555.3| Papio anubis clone RP41-63I4, complete sequence Length = 157673 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 66108 ttctttatttttatttttat 66089
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence Length = 186155 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 181649 ttctttatttttatttttat 181668
>gb|AC131332.12| Mus musculus chromosome 12, clone RP23-480O18, complete sequence Length = 182672 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 145127 ttctttatttttatttttat 145108
>gb|AC166827.2| Mus musculus BAC clone RP23-359M9 from chromosome 12, complete sequence Length = 219729 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 155485 ttctttatttttatttttat 155504
>gb|AC110227.6| Mus musculus chromosome 9, clone RP24-331H14, complete sequence Length = 196758 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 ttctttatttttatttttat 100 |||||||||||||||||||| Sbjct: 181728 ttctttatttttatttttat 181709 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,059,698 Number of Sequences: 3902068 Number of extensions: 12059698 Number of successful extensions: 435512 Number of sequences better than 10.0: 616 Number of HSP's better than 10.0 without gapping: 623 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 428336 Number of HSP's gapped (non-prelim): 7058 length of query: 647 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 624 effective length of database: 17,143,297,704 effective search space: 10697417767296 effective search space used: 10697417767296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
