ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13n13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_465274.1| Oryza sativa (japonica cultivar-group), mRNA 545 e-152
2dbj|AK068494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 529 e-147
3gb|AF498270.1| Haynaldia villosa clone kong36 mRNA 505 e-140
4gb|AY107525.1| Zea mays PCO115693 mRNA sequence 165 2e-37
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
6dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
7gb|AY111209.1| Zea mays CL10931_1 mRNA sequence 133 8e-28
8ref|NM_102370.2| Arabidopsis thaliana unknown protein AT1G25682 ... 88 4e-14
9gb|BT011673.1| Arabidopsis thaliana At1g25682 mRNA, complete cds 88 4e-14
10dbj|AK221692.1| Arabidopsis thaliana mRNA for hypothetical prote... 88 4e-14
11emb|BX813833.1|CNS0ADT1 Arabidopsis thaliana Full-length cDNA Co... 88 4e-14
12gb|AC146570.6| Medicago truncatula clone mth2-103j7, complete se... 68 4e-08
13emb|AJ566963.1|GHI566963 Gossypium hirsutum microsatellite DNA m... 52 0.002
14emb|CR956399.4| M.truncatula DNA sequence from clone MTH2-7L7 on... 52 0.002
15gb|AC084221.7|AC084221 Arabidopsis thaliana chromosome 1 BAC F14... 50 0.009
16gb|AC069223.15| Homo sapiens 3 BAC RP11-398O21 (Roswell Park Can... 48 0.037
17gb|AC068763.11| Homo sapiens 3 BAC RP11-133K20 (Roswell Park Can... 48 0.037
18gb|AC183831.2| Pan troglodytes BAC clone CH251-280E18 from chrom... 46 0.15
19gb|AC006329.5| Homo sapiens BAC clone RP11-132A1 from 7, complet... 46 0.15
20gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, comp... 44 0.58
21gb|CP000133.1| Rhizobium etli CFN 42, complete genome 44 0.58
22emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on ch... 44 0.58
23ref|XM_637845.1| Dictyostelium discoideum hypothetical protein (... 42 2.3
24ref|XM_634161.1| Dictyostelium discoideum hypothetical protein (... 42 2.3
25gb|AC184848.2| Pan troglodytes BAC clone CH251-277H16 from chrom... 42 2.3
26ref|XM_324143.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.3
27ref|XM_955320.1| Neurospora crassa OR74A hypothetical protein (N... 42 2.3
28gb|AC092585.2| Homo sapiens BAC clone RP11-20L17 from 7, complet... 42 2.3
29emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone... 42 2.3
30emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 42 2.3
31emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 42 2.3
32gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047... 42 2.3
33dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 2.3
34emb|X71654.1|SMCYP71B3 S.melongena CYP71A2 mRNA for hydroxylase 42 2.3
35gb|AF007553.1|AF007553 Thermus aquaticus caldophilus mismatch re... 42 2.3
36gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 2.3
37emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chr... 42 2.3
38dbj|D14990.1|POTCPEG4 Eggplant mRNA for cytochrome P-450EG4, com... 42 2.3
39dbj|D63810.1|TTHMUTS Thermus thermophilus mutS gene for MutS, co... 42 2.3
40ref|NM_100363.2| Arabidopsis thaliana nucleic acid binding / zin... 40 9.0
41gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, com... 40 9.0
42gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, co... 40 9.0
43gb|AC149481.1| Populus trichocarpa clone Pop1-16J18, complete se... 40 9.0
44gb|AC149541.1| Populus trichocarpa clone Pop1-12C14, complete se... 40 9.0
45gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome... 40 9.0
46gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosom... 40 9.0
47gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, c... 40 9.0
48ref|XM_661548.1| Cryptosporidium hominis TU502 deoxyuridine 5'-t... 40 9.0
49ref|XM_793424.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 9.0
50emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chr... 40 9.0
51emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on ch... 40 9.0
52ref|XM_971279.1| PREDICTED: Tribolium castaneum hypothetical pro... 40 9.0
53emb|Z25420.1|GDINCENPB G.domesticus class II INCENP protein mRNA... 40 9.0
54emb|Z25419.1|GDINCENPA G.domesticus class I INCENP protein mRNA,... 40 9.0
55gb|BT000147.1| Arabidopsis thaliana Unknown protein (At1g04850) ... 40 9.0
56emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 c... 40 9.0
57gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome... 40 9.0
58ref|NM_205330.1| Gallus gallus inner centromere protein antigens... 40 9.0
59gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete se... 40 9.0
60ref|XM_692368.1| PREDICTED: Danio rerio similar to UPF2 regulato... 40 9.0
61gb|AY062609.1| Arabidopsis thaliana Unknown protein (F13M7.16) m... 40 9.0
62gb|DQ067256.1| Viola pubescens var. scabriuscula clone Vpub-11 m... 40 9.0
63emb|BX818444.1|CNS0AE4O Arabidopsis thaliana Full-length cDNA Co... 40 9.0
64gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosom... 40 9.0
65gb|AY088435.1| Arabidopsis thaliana clone 6672 mRNA, complete se... 40 9.0
66gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 ... 40 9.0
67gb|AC097103.8| Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cance... 40 9.0
68gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, co... 40 9.0
69gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, com... 40 9.0
70emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chr... 40 9.0
71emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chro... 40 9.0
72emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chr... 40 9.0
73emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chro... 40 9.0
74emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chr... 40 9.0 
>ref|XM_465274.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1323

 Score =  545 bits (275), Expect = e-152
 Identities = 482/551 (87%)
 Strand = Plus / Plus

                                                                       
Query: 99  ggagacaacatgtcgacgcttgccgcggcgagggccgacaacttctactacccgcccgaa 158
           |||| ||| |||||| |||| |||||||| ||||| || ||||||||||||||||| |||
Sbjct: 140 ggaggcaagatgtcgtcgctcgccgcggcaagggcggataacttctactacccgccggaa 199

                                                                       
Query: 159 tggagcccgaagaagggtgggctgaacaagttccacggccagcatgccctcagggagcgg 218
           |||||||| |||||||||||||| ||||||||||| || || ||||| |||||||| |||
Sbjct: 200 tggagcccaaagaagggtgggctcaacaagttccatggacaacatgctctcagggaacgg 259

                                                                       
Query: 219 gcgaggaagctggaccagggcatcctgattataagattcgagatgcctttcaatgtctgg 278
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct: 260 gcgaggaagctggaccagggcatcctgattataagattcgagatgccattcaatatttgg 319

                                                                       
Query: 279 tgtggtggatgcagttccatgatagggaagggtgtaaggtttaatgctgaaaagaaacaa 338
           |||||||| ||||  ||||||||||  ||||| || |||||||| ||||| |||||||||
Sbjct: 320 tgtggtgggtgcaactccatgatagcaaagggagtgaggtttaacgctgagaagaaacaa 379

                                                                       
Query: 339 gttggaaattactactctaccaagatatggagcttcagtatgaaatcaccatgttgccag 398
           ||||| ||||| |||||||||||||||||||||||||  |||||||||||||| ||| | 
Sbjct: 380 gttgggaattattactctaccaagatatggagcttcaccatgaaatcaccatgctgcaaa 439

                                                                       
Query: 399 catgagatagtcatacatacggacccgaagaacactgagtatgttatagtcagtggagct 458
           || || ||||| ||||| || ||||| ||||| |||||||| || ||| | |||||||||
Sbjct: 440 caagaaatagttatacaaacagacccaaagaatactgagtacgtcataattagtggagct 499

                                                                       
Query: 459 cagcggaagactgaagattttgatgttgaagatgcagagacgctcctgctccctgcggat 518
           || || ||||||||||||| |||||| || ||||||||||| || ||||| ||||| |||
Sbjct: 500 caacgaaagactgaagattatgatgtggaggatgcagagacactactgctacctgcagat 559

                                                                       
Query: 519 gaagaaagagacaagcttgcggatcctatgtataagctcgaacaccagggagaggatatt 578
           |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||
Sbjct: 560 gaagaaagagacaagcttgcggatcctatgtataagcttgaacaccaggaagaggatctt 619

                                                                       
Query: 579 cggaagaagaaagaagaggagcctgttttagttcggcttcaacgcctctctgatagccgt 638
              |||||||||||||  || || ||||||||||| |||||||| ||||| |||||||| 
Sbjct: 620 aaaaagaagaaagaagctgaaccagttttagttcgccttcaacgactctccgatagccgg 679

                      
Query: 639 cattccgatga 649
           ||||| |||||
Sbjct: 680 cattctgatga 690
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>dbj|AK068494.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156M22, full
           insert sequence
          Length = 1323

 Score =  529 bits (267), Expect = e-147
 Identities = 480/551 (87%)
 Strand = Plus / Plus

                                                                       
Query: 99  ggagacaacatgtcgacgcttgccgcggcgagggccgacaacttctactacccgcccgaa 158
           |||| ||| |||||| |||| |||||||| ||||| || ||||||||||||||||| |||
Sbjct: 140 ggaggcaagatgtcgtcgctcgccgcggcaagggcggataacttctactacccgccggaa 199

                                                                       
Query: 159 tggagcccgaagaagggtgggctgaacaagttccacggccagcatgccctcagggagcgg 218
           |||||||| |||||||||||||| ||||||||||| || || ||||| |||||||  |||
Sbjct: 200 tggagcccaaagaagggtgggctcaacaagttccatggacaacatgctctcaggggacgg 259

                                                                       
Query: 219 gcgaggaagctggaccagggcatcctgattataagattcgagatgcctttcaatgtctgg 278
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct: 260 gcgaggaagctggaccagggcatcctgattataagattcgagatgccattcaatatttgg 319

                                                                       
Query: 279 tgtggtggatgcagttccatgatagggaagggtgtaaggtttaatgctgaaaagaaacaa 338
           |||||||| ||||  ||||||||||  ||||| || |||||||| ||||| |||||||||
Sbjct: 320 tgtggtgggtgcaactccatgatagcaaagggagtgaggtttaacgctgagaagaaacaa 379

                                                                       
Query: 339 gttggaaattactactctaccaagatatggagcttcagtatgaaatcaccatgttgccag 398
           ||||| ||||| |||||||||||||||||||||||||  |||||||||||||| ||| | 
Sbjct: 380 gttgggaattattactctaccaagatatggagcttcaccatgaaatcaccatgctgcaaa 439

                                                                       
Query: 399 catgagatagtcatacatacggacccgaagaacactgagtatgttatagtcagtggagct 458
           || || ||||| ||||| || ||||| ||||| |||||||| || ||| | |||||||||
Sbjct: 440 caagaaatagttatacaaacagacccaaagaatactgagtacgtcataattagtggagct 499

                                                                       
Query: 459 cagcggaagactgaagattttgatgttgaagatgcagagacgctcctgctccctgcggat 518
           || || ||||||||||||| |||||| || ||||||||||| || ||||| ||||| |||
Sbjct: 500 caacgaaagactgaagattatgatgtggaggatgcagagacactactgctacctgcagat 559

                                                                       
Query: 519 gaagaaagagacaagcttgcggatcctatgtataagctcgaacaccagggagaggatatt 578
           |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||
Sbjct: 560 gaagaaagagacaagcttgcggatcctatgtataagcttgaacaccaggaagaggatctt 619

                                                                       
Query: 579 cggaagaagaaagaagaggagcctgttttagttcggcttcaacgcctctctgatagccgt 638
              |||||||||||||  || || ||||||||||| |||||||| ||||| | |||||| 
Sbjct: 620 aaaaagaagaaagaagctgaaccagttttagttcgccttcaacgactctccggtagccgg 679

                      
Query: 639 cattccgatga 649
           ||||| |||||
Sbjct: 680 cattctgatga 690
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>gb|AF498270.1| Haynaldia villosa clone kong36 mRNA
          Length = 1083

 Score =  505 bits (255), Expect = e-140
 Identities = 276/283 (97%)
 Strand = Plus / Plus

                                                                       
Query: 379 tgaaatcaccatgttgccagcatgagatagtcatacatacggacccgaagaacactgagt 438
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 15  tgaaatcaccatgttgccagcatgagatagtcatacatacggacccgaagaatactgagt 74

                                                                       
Query: 439 atgttatagtcagtggagctcagcggaagactgaagattttgatgttgaagatgcagaga 498
           |||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 75  atgttataatcagtggggctcagcggaagactgaagatttcgatgttgaagatgcagaga 134

                                                                       
Query: 499 cgctcctgctccctgcggatgaagaaagagacaagcttgcggatcctatgtataagctcg 558
           |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 135 cgctcctgctccctgcggatgaagaaagagacaagcttgcggatcccatgtataagcttg 194

                                                                       
Query: 559 aacaccagggagaggatattcggaagaagaaagaagaggagcctgttttagttcggcttc 618
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aacaccagggagaggatattcggaagaagaaagaagaggagcctgttttagttcggcttc 254

                                                      
Query: 619 aacgcctctctgatagccgtcattccgatgattattccctgaa 661
           ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 255 aacgcctctctgatagccgtcattctgatgattattccctgaa 297
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>gb|AY107525.1| Zea mays PCO115693 mRNA sequence
          Length = 726

 Score =  165 bits (83), Expect = 2e-37
 Identities = 164/191 (85%)
 Strand = Plus / Plus

                                                                       
Query: 471 gaagattttgatgttgaagatgcagagacgctcctgctccctgcggatgaagaaagagac 530
           ||||||||||||||||| |||||||||||  | ||||| || || ||||||||  |||||
Sbjct: 12  gaagattttgatgttgaggatgcagagacattgctgctgccagcagatgaagatcgagac 71

                                                                       
Query: 531 aagcttgcggatcctatgtataagctcgaacaccagggagaggatattcggaagaagaaa 590
           |||||||||||||||||||||  ||| |||||||||| ||||||| |||||||||| |||
Sbjct: 72  aagcttgcggatcctatgtatcggcttgaacaccaggaagaggatcttcggaagaaaaaa 131

                                                                       
Query: 591 gaagaggagcctgttttagttcggcttcaacgcctctctgatagccgtcattccgatgat 650
           ||||  ||||| ||||||||||| ||||| || ||||| || ||||| || || ||||||
Sbjct: 132 gaagctgagccagttttagttcgccttcagcgactctcagacagccggcactctgatgat 191

                      
Query: 651 tattccctgaa 661
           ||| |||||||
Sbjct: 192 tatgccctgaa 202
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  137 bits (69), Expect = 5e-29
 Identities = 114/129 (88%)
 Strand = Plus / Plus

                                                                            
Query: 521      agaaagagacaagcttgcggatcctatgtataagctcgaacaccagggagaggatattcg 580
                |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||  
Sbjct: 13011293 agaaagagacaagcttgcggatcctatgtataagcttgaacaccaggaagaggatcttaa 13011352

                                                                            
Query: 581      gaagaagaaagaagaggagcctgttttagttcggcttcaacgcctctctgatagccgtca 640
                 |||||||||||||  || || ||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 13011353 aaagaagaaagaagctgaaccagttttagttcgccttcaacgactctccgatagccggca 13011412

                         
Query: 641      ttccgatga 649
                ||| |||||
Sbjct: 13011413 ttctgatga 13011421



 Score =  123 bits (62), Expect = 8e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                            
Query: 361      agatatggagcttcagtatgaaatcaccatgttgccagcatgagatagtcatacatacgg 420
                |||||||||||||||  |||||||||||||| ||| | || || ||||| ||||| || |
Sbjct: 13011042 agatatggagcttcaccatgaaatcaccatgctgcaaacaagaaatagttatacaaacag 13011101

                                                                            
Query: 421      acccgaagaacactgagtatgttatagtcagtggagctcagcggaagactgaagattttg 480
                |||| ||||| |||||||| || ||| | ||||||||||| || ||||||||||||| ||
Sbjct: 13011102 acccaaagaatactgagtacgtcataattagtggagctcaacgaaagactgaagattatg 13011161

                                                          
Query: 481      atgttgaagatgcagagacgctcctgctccctgcggatgaag 522
                |||| || ||||||||||| || ||||| ||||| |||||||
Sbjct: 13011162 atgtggaggatgcagagacactactgctacctgcagatgaag 13011203



 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                            
Query: 172      agggtgggctgaacaagttccacggccagcatgccctcagggagcgggcgaggaagctgg 231
                |||||||||| ||||||||||| || || ||||| |||||||| ||||||||||||||||
Sbjct: 13006606 agggtgggctcaacaagttccatggacaacatgctctcagggaacgggcgaggaagctgg 13006665

                                      
Query: 232      accagggcatcctgattataag 253
                ||||||||||||||||||||||
Sbjct: 13006666 accagggcatcctgattataag 13006687



 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                            
Query: 252      agattcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaagggt 311
                |||||||||||||| |||||| | ||||||||||| ||||  ||||||||||  ||||| 
Sbjct: 13007962 agattcgagatgccattcaatatttggtgtggtgggtgcaactccatgatagcaaaggga 13008021

                                                                        
Query: 312      gtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagatatg 367
                || |||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||
Sbjct: 13008022 gtgaggtttaacgctgagaagaaacaagttgggaattattactctaccaaggtatg 13008077



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 110      gtcgacgcttgccgcggcgagggccgacaacttctactacccgcccgaatggagcccgaa 169
                |||| |||| |||||||| ||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 13006438 gtcgtcgctcgccgcggcaagggcggataacttctactacccgccggaatggagcccaaa 13006497

                     
Query: 170      gaagg 174
                |||||
Sbjct: 13006498 gaagg 13006502
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0688H12
          Length = 139279

 Score =  137 bits (69), Expect = 5e-29
 Identities = 114/129 (88%)
 Strand = Plus / Plus

                                                                          
Query: 521    agaaagagacaagcttgcggatcctatgtataagctcgaacaccagggagaggatattcg 580
              |||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||  
Sbjct: 120936 agaaagagacaagcttgcggatcctatgtataagcttgaacaccaggaagaggatcttaa 120995

                                                                          
Query: 581    gaagaagaaagaagaggagcctgttttagttcggcttcaacgcctctctgatagccgtca 640
               |||||||||||||  || || ||||||||||| |||||||| ||||| |||||||| ||
Sbjct: 120996 aaagaagaaagaagctgaaccagttttagttcgccttcaacgactctccgatagccggca 121055

                       
Query: 641    ttccgatga 649
              ||| |||||
Sbjct: 121056 ttctgatga 121064



 Score =  123 bits (62), Expect = 8e-25
 Identities = 137/162 (84%)
 Strand = Plus / Plus

                                                                          
Query: 361    agatatggagcttcagtatgaaatcaccatgttgccagcatgagatagtcatacatacgg 420
              |||||||||||||||  |||||||||||||| ||| | || || ||||| ||||| || |
Sbjct: 120685 agatatggagcttcaccatgaaatcaccatgctgcaaacaagaaatagttatacaaacag 120744

                                                                          
Query: 421    acccgaagaacactgagtatgttatagtcagtggagctcagcggaagactgaagattttg 480
              |||| ||||| |||||||| || ||| | ||||||||||| || ||||||||||||| ||
Sbjct: 120745 acccaaagaatactgagtacgtcataattagtggagctcaacgaaagactgaagattatg 120804

                                                        
Query: 481    atgttgaagatgcagagacgctcctgctccctgcggatgaag 522
              |||| || ||||||||||| || ||||| ||||| |||||||
Sbjct: 120805 atgtggaggatgcagagacactactgctacctgcagatgaag 120846



 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                          
Query: 172    agggtgggctgaacaagttccacggccagcatgccctcagggagcgggcgaggaagctgg 231
              |||||||||| ||||||||||| || || ||||| |||||||| ||||||||||||||||
Sbjct: 116249 agggtgggctcaacaagttccatggacaacatgctctcagggaacgggcgaggaagctgg 116308

                                    
Query: 232    accagggcatcctgattataag 253
              ||||||||||||||||||||||
Sbjct: 116309 accagggcatcctgattataag 116330



 Score =  111 bits (56), Expect = 3e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                          
Query: 252    agattcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaagggt 311
              |||||||||||||| |||||| | ||||||||||| ||||  ||||||||||  ||||| 
Sbjct: 117605 agattcgagatgccattcaatatttggtgtggtgggtgcaactccatgatagcaaaggga 117664

                                                                      
Query: 312    gtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagatatg 367
              || |||||||| ||||| |||||||||||||| ||||| |||||||||||| ||||
Sbjct: 117665 gtgaggtttaacgctgagaagaaacaagttgggaattattactctaccaaggtatg 117720



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 110    gtcgacgcttgccgcggcgagggccgacaacttctactacccgcccgaatggagcccgaa 169
              |||| |||| |||||||| ||||| || ||||||||||||||||| ||||||||||| ||
Sbjct: 116081 gtcgtcgctcgccgcggcaagggcggataacttctactacccgccggaatggagcccaaa 116140

                   
Query: 170    gaagg 174
              |||||
Sbjct: 116141 gaagg 116145
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>gb|AY111209.1| Zea mays CL10931_1 mRNA sequence
          Length = 505

 Score =  133 bits (67), Expect = 8e-28
 Identities = 79/83 (95%)
 Strand = Plus / Minus

                                                                       
Query: 172 agggtgggctgaacaagttccacggccagcatgccctcagggagcgggcgaggaagctgg 231
           |||||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| |
Sbjct: 257 agggtgggctgaacaagttccatggccagcatgcgctcagggagcgagcgaggaagctcg 198

                                  
Query: 232 accagggcatcctgattataaga 254
           |||||||||||||||||||||||
Sbjct: 197 accagggcatcctgattataaga 175
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>ref|NM_102370.2| Arabidopsis thaliana unknown protein AT1G25682 mRNA, complete cds
          Length = 1206

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 134/164 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ataagattcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaag 308
           ||||| ||||||||||| |  ||| | ||||||||||| || ||||| ||||| |  |||
Sbjct: 204 ataaggttcgagatgccctataatatatggtgtggtggctgtagttctatgatcgccaag 263

                                                                       
Query: 309 ggtgtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagatatgg 368
           |||||  | |||||||| |||||||| |||||||| || || || ||||| |||||||||
Sbjct: 264 ggtgttcgatttaatgcagaaaagaagcaagttggcaactattattctacaaagatatgg 323

                                                       
Query: 369 agcttcagtatgaaatcaccatgttgccagcatgagatagtcat 412
           |||||    |||||||||||||| ||  | ||||||||||||||
Sbjct: 324 agctttgcaatgaaatcaccatgctgtaaacatgagatagtcat 367
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>gb|BT011673.1| Arabidopsis thaliana At1g25682 mRNA, complete cds
          Length = 933

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 134/164 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ataagattcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaag 308
           ||||| ||||||||||| |  ||| | ||||||||||| || ||||| ||||| |  |||
Sbjct: 142 ataaggttcgagatgccctataatatatggtgtggtggctgtagttctatgatcgccaag 201

                                                                       
Query: 309 ggtgtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagatatgg 368
           |||||  | |||||||| |||||||| |||||||| || || || ||||| |||||||||
Sbjct: 202 ggtgttcgatttaatgcagaaaagaagcaagttggcaactattattctacaaagatatgg 261

                                                       
Query: 369 agcttcagtatgaaatcaccatgttgccagcatgagatagtcat 412
           |||||    |||||||||||||| ||  | ||||||||||||||
Sbjct: 262 agctttgcaatgaaatcaccatgctgtaaacatgagatagtcat 305
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>dbj|AK221692.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds,
           clone: RAFL15-18-P10
          Length = 1164

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 134/164 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ataagattcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaag 308
           ||||| ||||||||||| |  ||| | ||||||||||| || ||||| ||||| |  |||
Sbjct: 227 ataaggttcgagatgccctataatatatggtgtggtggctgtagttctatgatcgccaag 286

                                                                       
Query: 309 ggtgtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagatatgg 368
           |||||  | |||||||| |||||||| |||||||| || || || ||||| |||||||||
Sbjct: 287 ggtgttcgatttaatgcagaaaagaagcaagttggcaactattattctacaaagatatgg 346

                                                       
Query: 369 agcttcagtatgaaatcaccatgttgccagcatgagatagtcat 412
           |||||    |||||||||||||| ||  | ||||||||||||||
Sbjct: 347 agctttgcaatgaaatcaccatgctgtaaacatgagatagtcat 390
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>emb|BX813833.1|CNS0ADT1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB41ZF06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1060

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 134/164 (81%)
 Strand = Plus / Plus

                                                                       
Query: 249 ataagattcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaag 308
           ||||| ||||||||||| |  ||| | ||||||||||| || ||||| ||||| |  |||
Sbjct: 204 ataaggttcgagatgccctataatatatggtgtggtggctgtagttctatgatcgccaag 263

                                                                       
Query: 309 ggtgtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagatatgg 368
           |||||  | |||||||| |||||||| |||||||| || || || ||||| |||||||||
Sbjct: 264 ggtgttcgatttaatgcagaaaagaagcaagttggcaactattattctacaaagatatgg 323

                                                       
Query: 369 agcttcagtatgaaatcaccatgttgccagcatgagatagtcat 412
           |||||    |||||||||||||| ||  | ||||||||||||||
Sbjct: 324 agctttgcaatgaaatcaccatgctgtaaacatgagatagtcat 367
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>gb|AC146570.6| Medicago truncatula clone mth2-103j7, complete sequence
          Length = 122623

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Minus

                                                                         
Query: 258   gagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaagggtgtaagg 317
             |||||||||| |||| | ||||| || ||||||| ||| ||||| |  ||||||||  ||
Sbjct: 43769 gagatgccttacaatatatggtgcggaggatgcaattctatgattgcaaagggtgtccgg 43710

                                                               
Query: 318   tttaatgctgaaaagaaacaagttggaaattactactctaccaagatatg 367
             || ||||| || ||||| |||||||| |||||||||||||| ||| ||||
Sbjct: 43709 ttcaatgcagagaagaagcaagttgggaattactactctacaaaggtatg 43660
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>emb|AJ566963.1|GHI566963 Gossypium hirsutum microsatellite DNA mGhCIR014, clone CIR014
          Length = 392

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 450 agtggagctcagcggaagactgaagattttgatgttgaagatgcagagac 499
           ||||| ||||||||||| |||||||  ||||||||||| || ||||||||
Sbjct: 388 agtggggctcagcggaaaactgaagtgtttgatgttgaggacgcagagac 339
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>emb|CR956399.4| M.truncatula DNA sequence from clone MTH2-7L7 on chromosome 3, complete
             sequence
          Length = 142604

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                         
Query: 306   aagggtgtaaggtttaatgctgaaaagaaacaagttggaaattactactctaccaagata 365
             ||||||||  |||| ||||| || ||||| |||||||| |||||||||||||| ||| ||
Sbjct: 13232 aagggtgtccggttcaatgcagagaagaagcaagttgggaattactactctacaaaggta 13291

               
Query: 366   tg 367
             ||
Sbjct: 13292 tg 13293
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>gb|AC084221.7|AC084221 Arabidopsis thaliana chromosome 1 BAC F14G11 genomic sequence, complete
             sequence
          Length = 46009

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 73/89 (82%)
 Strand = Plus / Minus

                                                                         
Query: 255   ttcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaagggtgta 314
             ||||||||||| |  ||| | ||||||||||| || ||||| ||||| |  |||||||| 
Sbjct: 13013 ttcgagatgccctataatatatggtgtggtggctgtagttctatgatcgccaagggtgtt 12954

                                          
Query: 315   aggtttaatgctgaaaagaaacaagttgg 343
              | |||||||| |||||||| ||||||||
Sbjct: 12953 cgatttaatgcagaaaagaagcaagttgg 12925



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 44/52 (84%)
 Strand = Plus / Minus

                                                                 
Query: 361   agatatggagcttcagtatgaaatcaccatgttgccagcatgagatagtcat 412
             |||||||||||||    |||||||||||||| ||  | ||||||||||||||
Sbjct: 12776 agatatggagctttgcaatgaaatcaccatgctgtaaacatgagatagtcat 12725
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>gb|AC069223.15| Homo sapiens 3 BAC RP11-398O21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179767

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 259   agatgcctttcaatgtctggtgtggtgg 286
             ||||| ||||||||||||||||||||||
Sbjct: 86819 agatgtctttcaatgtctggtgtggtgg 86846
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>gb|AC068763.11| Homo sapiens 3 BAC RP11-133K20 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180638

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 259   agatgcctttcaatgtctggtgtggtgg 286
             ||||| ||||||||||||||||||||||
Sbjct: 81596 agatgtctttcaatgtctggtgtggtgg 81569
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>gb|AC183831.2| Pan troglodytes BAC clone CH251-280E18 from chromosome 7, complete
              sequence
          Length = 169210

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 223    ggaagctggaccagggcatcctg 245
              |||||||||||||||||||||||
Sbjct: 164845 ggaagctggaccagggcatcctg 164823
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>gb|AC006329.5| Homo sapiens BAC clone RP11-132A1 from 7, complete sequence
          Length = 145253

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 223   ggaagctggaccagggcatcctg 245
             |||||||||||||||||||||||
Sbjct: 52092 ggaagctggaccagggcatcctg 52114
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>gb|AC110508.8| Mus musculus chromosome 3, clone RP23-382L1, complete sequence
          Length = 224790

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 580    ggaagaagaaagaagaggagcctgtt 605
              ||||||||||||||||||||| ||||
Sbjct: 124301 ggaagaagaaagaagaggagcgtgtt 124326
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 65      tcgtcgcgccgctgatatcctc 86
               ||||||||||||||||||||||
Sbjct: 2955994 tcgtcgcgccgctgatatcctc 2956015
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>emb|AL627086.22| Mouse DNA sequence from clone RP23-477P14 on chromosome 3, complete
             sequence
          Length = 106019

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 580   ggaagaagaaagaagaggagcctgtt 605
             ||||||||||||||||||||| ||||
Sbjct: 86629 ggaagaagaaagaagaggagcgtgtt 86654
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>ref|XM_637845.1| Dictyostelium discoideum hypothetical protein (DDB0217899), partial
           mRNA
          Length = 1077

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 474 gattttgatgttgaagatgca 494
           |||||||||||||||||||||
Sbjct: 379 gattttgatgttgaagatgca 399
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>ref|XM_634161.1| Dictyostelium discoideum hypothetical protein (DDB0185375), partial
           mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 474 gattttgatgttgaagatgca 494
           |||||||||||||||||||||
Sbjct: 757 gattttgatgttgaagatgca 777
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>gb|AC184848.2| Pan troglodytes BAC clone CH251-277H16 from chromosome 7, complete
            sequence
          Length = 155781

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 223  ggaagctggaccagggcatcc 243
            |||||||||||||||||||||
Sbjct: 5665 ggaagctggaccagggcatcc 5685
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>ref|XM_324143.1| Neurospora crassa OR74A hypothetical protein (NCU04787.1) partial
           mRNA
          Length = 1911

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  tcctcgtcctcgtcgccggag 102
           |||||||||||||||||||||
Sbjct: 833 tcctcgtcctcgtcgccggag 813
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>ref|XM_955320.1| Neurospora crassa OR74A hypothetical protein (NCU04787.1) partial
           mRNA
          Length = 1911

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  tcctcgtcctcgtcgccggag 102
           |||||||||||||||||||||
Sbjct: 833 tcctcgtcctcgtcgccggag 813
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>gb|AC092585.2| Homo sapiens BAC clone RP11-20L17 from 7, complete sequence
          Length = 137446

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 223    ggaagctggaccagggcatcc 243
              |||||||||||||||||||||
Sbjct: 121446 ggaagctggaccagggcatcc 121466
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>emb|BX897677.1| Neurospora crassa DNA linkage group VI BAC clone B15B10
          Length = 77986

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 82   tcctcgtcctcgtcgccggag 102
            |||||||||||||||||||||
Sbjct: 1803 tcctcgtcctcgtcgccggag 1783
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>emb|BX571861.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              3/17
          Length = 342905

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 476    ttttgatgttgaagatgcagagacg 500
              |||||||||||||| ||||||||||
Sbjct: 256823 ttttgatgttgaaggtgcagagacg 256799



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 476    ttttgatgttgaagatgcagagacg 500
              |||||||||||||| ||||||||||
Sbjct: 251813 ttttgatgttgaaggtgcagagacg 251789
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>emb|BX571860.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
              2/17
          Length = 349287

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 476    ttttgatgttgaagatgcagagacg 500
              |||||||||||||| ||||||||||
Sbjct: 149845 ttttgatgttgaaggtgcagagacg 149869



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 476    ttttgatgttgaagatgcagagacg 500
              |||||||||||||| ||||||||||
Sbjct: 148662 ttttgatgttgaaggtgcagagacg 148686
to top
>gb|AC117075.2| Dictyostelium discoideum chromosome 2 map 5201047-5455781 strain AX4,
              complete sequence
          Length = 254733

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 474    gattttgatgttgaagatgca 494
              |||||||||||||||||||||
Sbjct: 175543 gattttgatgttgaagatgca 175523
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 203     tgccctcagggagcgggcgaggaag 227
               |||||| ||||||||||||||||||
Sbjct: 1262710 tgcccttagggagcgggcgaggaag 1262686
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>emb|X71654.1|SMCYP71B3 S.melongena CYP71A2 mRNA for hydroxylase
          Length = 1747

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 575 tattcggaagaagaaagaaga 595
           |||||||||||||||||||||
Sbjct: 812 tattcggaagaagaaagaaga 832
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>gb|AF007553.1|AF007553 Thermus aquaticus caldophilus mismatch repair protein (mutS) gene,
            complete cds
          Length = 2787

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 203  tgccctcagggagcgggcgaggaag 227
            |||||| ||||||||||||||||||
Sbjct: 1677 tgcccttagggagcgggcgaggaag 1701
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 203    tgccctcagggagcgggcgaggaag 227
              |||||| ||||||||||||||||||
Sbjct: 939972 tgcccttagggagcgggcgaggaag 939948
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>emb|AL713865.10| Mouse DNA sequence from clone RP23-451D4 on chromosome 4, complete
              sequence
          Length = 172962

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 316    ggtttaatgctgaaaagaaac 336
              |||||||||||||||||||||
Sbjct: 149019 ggtttaatgctgaaaagaaac 148999
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>dbj|D14990.1|POTCPEG4 Eggplant mRNA for cytochrome P-450EG4, complete cds
          Length = 1744

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 575 tattcggaagaagaaagaaga 595
           |||||||||||||||||||||
Sbjct: 812 tattcggaagaagaaagaaga 832
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>dbj|D63810.1|TTHMUTS Thermus thermophilus mutS gene for MutS, complete cds
          Length = 3283

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 203  tgccctcagggagcgggcgaggaag 227
            |||||| ||||||||||||||||||
Sbjct: 2176 tgcccttagggagcgggcgaggaag 2200
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>ref|NM_100363.2| Arabidopsis thaliana nucleic acid binding / zinc ion binding
           AT1G04850 mRNA, complete cds
          Length = 1521

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 579 cggaagaagaaagaagagga 598
           ||||||||||||||||||||
Sbjct: 664 cggaagaagaaagaagagga 683
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>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence
          Length = 213778

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 24796 ggaagaagaaagaagaggag 24777
to top
>gb|AC116781.9| Mus musculus chromosome 16, clone RP24-134G20, complete sequence
          Length = 166568

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    ggaagaagaaagaagaggag 599
              ||||||||||||||||||||
Sbjct: 130898 ggaagaagaaagaagaggag 130917
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>gb|AC149481.1| Populus trichocarpa clone Pop1-16J18, complete sequence
          Length = 120131

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 564   cagggagaggatattcggaagaagaaagaagaggagcctgttttagttcggcttca 619
             |||| ||||||| | | ||||||||||||||  ||||||||| |||| || |||||
Sbjct: 65102 caggaagaggatttgcagaagaagaaagaagctgagcctgttctagtccgccttca 65157



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                         
Query: 255   ttcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaagggtgta 314
             ||||| ||||| |||||| | ||||||||||| |||| ||| ||||| |  |||||||| 
Sbjct: 64061 ttcgaaatgcccttcaatatatggtgtggtggttgcaattctatgattgcaaagggtgtt 64120

                                                         
Query: 315   aggtttaatgctgaaaagaaacaagttggaaattactactctac 358
              | || ||||| || || || ||||| |||||||| || |||||
Sbjct: 64121 cgtttcaatgcagagaaaaagcaagtgggaaattattattctac 64164
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>gb|AC149541.1| Populus trichocarpa clone Pop1-12C14, complete sequence
          Length = 88772

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 564   cagggagaggatattcggaagaagaaagaagaggagcctgttttagttcggcttca 619
             |||| ||||||| | | ||||||||||||||  ||||||||| |||| || |||||
Sbjct: 66969 caggaagaggatttgcagaagaagaaagaagctgagcctgttctagtccgccttca 67024



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                         
Query: 255   ttcgagatgcctttcaatgtctggtgtggtggatgcagttccatgatagggaagggtgta 314
             ||||| ||||| |||||| | ||||||||||| |||| ||| ||||| |  |||||||| 
Sbjct: 65928 ttcgaaatgcccttcaatatatggtgtggtggttgcaattctatgattgcaaagggtgtt 65987

                                                         
Query: 315   aggtttaatgctgaaaagaaacaagttggaaattactactctac 358
              | || ||||| || || || ||||| |||||||| || |||||
Sbjct: 65988 cgtttcaatgcagagaaaaagcaagtgggaaattattattctac 66031
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>gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome 1, complete sequence
          Length = 182578

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 76029 ggaagaagaaagaagaggag 76048
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>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence
          Length = 205684

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 469    ctgaagattttgatgttgaa 488
              ||||||||||||||||||||
Sbjct: 181035 ctgaagattttgatgttgaa 181016
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>gb|AC118928.13| Mus musculus chromosome 16, clone RP23-416J10, complete sequence
          Length = 238516

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 98864 ggaagaagaaagaagaggag 98883
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>ref|XM_661548.1| Cryptosporidium hominis TU502 deoxyuridine 5'-triphosphate
           nucleotidohydrolase (Chro.70577) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 aaaagaaacaagttggaaat 347
           ||||||||||||||||||||
Sbjct: 363 aaaagaaacaagttggaaat 344
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>ref|XM_793424.1| PREDICTED: Strongylocentrotus purpuratus similar to Glutamate
           receptor, ionotropic kainate 2 precursor (Glutamate
           receptor 6) (GluR-6) (GluR6) (LOC593970), mRNA
          Length = 579

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 82  tcctcgtcctcgtcgccgga 101
           ||||||||||||||||||||
Sbjct: 446 tcctcgtcctcgtcgccgga 465
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>emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chromosome 9 Contains the
            5' end of a novel gene, complete sequence
          Length = 165517

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 580  ggaagaagaaagaagaggag 599
            ||||||||||||||||||||
Sbjct: 9198 ggaagaagaaagaagaggag 9179
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>emb|AL390777.13| Human DNA sequence from clone RP11-301F14 on chromosome 9 Contains the
             5' end of the NTRK2 gene for Neurotrophic tyrosine kinase,
             receptor, type 2 (TRKB) and a CpG island, complete
             sequence
          Length = 182914

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 78887 ggaagaagaaagaagaggag 78868
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>ref|XM_971279.1| PREDICTED: Tribolium castaneum hypothetical protein LOC661110
           (LOC661110), mRNA
          Length = 627

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 ggaagaagaaagaagaggag 599
           ||||||||||||||||||||
Sbjct: 217 ggaagaagaaagaagaggag 236



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 ggaagaagaaagaagaggag 599
           ||||||||||||||||||||
Sbjct: 33  ggaagaagaaagaagaggag 52
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>emb|Z25420.1|GDINCENPB G.domesticus class II INCENP protein mRNA, complete CDS
          Length = 4354

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  gaagaagaaagaagaggagc 600
            ||||||||||||||||||||
Sbjct: 1935 gaagaagaaagaagaggagc 1954
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>emb|Z25419.1|GDINCENPA G.domesticus class I INCENP protein mRNA, complete CDS
          Length = 4481

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  gaagaagaaagaagaggagc 600
            ||||||||||||||||||||
Sbjct: 1935 gaagaagaaagaagaggagc 1954
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>gb|BT000147.1| Arabidopsis thaliana Unknown protein (At1g04850) mRNA, complete cds
          Length = 1356

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 579 cggaagaagaaagaagagga 598
           ||||||||||||||||||||
Sbjct: 577 cggaagaagaaagaagagga 596
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>emb|BX571864.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment
             6/17
          Length = 349071

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 476   ttttgatgttgaagatgcagagac 499
             |||||||||||||| |||||||||
Sbjct: 52290 ttttgatgttgaaggtgcagagac 52313
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>gb|AC141480.4| Mus musculus BAC clone RP23-210I6 from chromosome 3, complete sequence
          Length = 209458

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 37180 ggaagaagaaagaagaggag 37161
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>ref|NM_205330.1| Gallus gallus inner centromere protein antigens 135/155kDa (INCENP),
            mRNA
          Length = 4481

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 581  gaagaagaaagaagaggagc 600
            ||||||||||||||||||||
Sbjct: 1935 gaagaagaaagaagaggagc 1954
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>gb|AC087184.7| Mus Musculus Chromosome 3 RP23-403C5, complete sequence
          Length = 206400

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    ggaagaagaaagaagaggag 599
              ||||||||||||||||||||
Sbjct: 165392 ggaagaagaaagaagaggag 165411



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    ggaagaagaaagaagaggag 599
              ||||||||||||||||||||
Sbjct: 165367 ggaagaagaaagaagaggag 165386
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>ref|XM_692368.1| PREDICTED: Danio rerio similar to UPF2 regulator of nonsense
           transcripts homolog (LOC569006), partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 ggaagaagaaagaagaggag 599
           ||||||||||||||||||||
Sbjct: 212 ggaagaagaaagaagaggag 231
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>gb|AY062609.1| Arabidopsis thaliana Unknown protein (F13M7.16) mRNA, complete cds
          Length = 1412

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 579 cggaagaagaaagaagagga 598
           ||||||||||||||||||||
Sbjct: 610 cggaagaagaaagaagagga 629
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>gb|DQ067256.1| Viola pubescens var. scabriuscula clone Vpub-11 microsatellite
           sequence
          Length = 581

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 580 ggaagaagaaagaagaggag 599
           ||||||||||||||||||||
Sbjct: 290 ggaagaagaaagaagaggag 271
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>emb|BX818444.1|CNS0AE4O Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 579 cggaagaagaaagaagagga 598
           ||||||||||||||||||||
Sbjct: 642 cggaagaagaaagaagagga 661
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>gb|AC158517.1| Mus musculus BAC clone RP24-114B19 from chromosome 12, complete
             sequence
          Length = 168486

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 469   ctgaagattttgatgttgaa 488
             ||||||||||||||||||||
Sbjct: 99669 ctgaagattttgatgttgaa 99688
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>gb|AY088435.1| Arabidopsis thaliana clone 6672 mRNA, complete sequence
          Length = 1519

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 579 cggaagaagaaagaagagga 598
           ||||||||||||||||||||
Sbjct: 664 cggaagaagaaagaagagga 683
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>gb|AC004809.1|F13M7 Arabidopsis thaliana chromosome 1 BAC F13M7 sequence, complete sequence
          Length = 89713

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 579   cggaagaagaaagaagagga 598
             ||||||||||||||||||||
Sbjct: 55944 cggaagaagaaagaagagga 55963
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>gb|AC097103.8| Homo sapiens 3 BAC RP11-319G6 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 87000

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 62324 ggaagaagaaagaagaggag 62343
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>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence
          Length = 178509

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 580    ggaagaagaaagaagaggag 599
              ||||||||||||||||||||
Sbjct: 112645 ggaagaagaaagaagaggag 112664
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>gb|AC118643.6| Mus musculus chromosome 1, clone RP24-113H21, complete sequence
          Length = 184206

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 45102 ggaagaagaaagaagaggag 45083
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>emb|AL845534.7| Mouse DNA sequence from clone RP23-223C17 on chromosome 2, complete
             sequence
          Length = 191379

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 12490 ggaagaagaaagaagaggag 12471
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>emb|AL672244.15| Mouse DNA sequence from clone RP23-43I8 on chromosome 16, complete
              sequence
          Length = 243114

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 580    ggaagaagaaagaagaggag 599
              ||||||||||||||||||||
Sbjct: 175948 ggaagaagaaagaagaggag 175929
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>emb|AL671478.9| Mouse DNA sequence from clone RP23-110A15 on chromosome X, complete
            sequence
          Length = 208695

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 580  ggaagaagaaagaagaggag 599
            ||||||||||||||||||||
Sbjct: 5692 ggaagaagaaagaagaggag 5673
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>emb|AL772264.8| Mouse DNA sequence from clone RP23-15I21 on chromosome 2, complete
             sequence
          Length = 189540

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   ggaagaagaaagaagaggag 599
             ||||||||||||||||||||
Sbjct: 20195 ggaagaagaaagaagaggag 20214
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>emb|AL606908.10| Mouse DNA sequence from clone RP23-273D6 on chromosome 4, complete
             sequence
          Length = 212360

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 581   gaagaagaaagaagaggagc 600
             ||||||||||||||||||||
Sbjct: 75772 gaagaagaaagaagaggagc 75791


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,181,061
Number of Sequences: 3902068
Number of extensions: 6181061
Number of successful extensions: 152905
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 152548
Number of HSP's gapped (non-prelim): 353
length of query: 661
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 638
effective length of database: 17,143,297,704
effective search space: 10937423935152
effective search space used: 10937423935152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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