ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basd14c04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1120 bits (565), Expect = 0.0 Identities = 579/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119426 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 119367 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119366 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 119307 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119306 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 119247 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119246 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 119187 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119186 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 119127 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119126 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 119067 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 119066 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 119008 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119007 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 118949 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118948 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 118889 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118888 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118848 Score = 1120 bits (565), Expect = 0.0 Identities = 579/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95468 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 95527 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95528 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 95587 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95588 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 95647 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95648 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 95707 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95708 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 95767 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95768 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 95827 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 95828 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 95886 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95887 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 95945 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95946 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 96005 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 96006 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96046
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119291 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119232 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119231 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 119172 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119171 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 119112 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119111 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 119052 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119051 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 118992 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118991 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 118932 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118931 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 118873 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118872 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 118814 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118813 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 118754 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118753 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118713 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95865 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 95924 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95925 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 95984 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95985 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 96044 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96045 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 96104 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96105 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 96164 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96165 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 96224 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96225 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 96283 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96284 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 96342 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96343 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 96402 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 96403 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96443
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119291 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119232 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119231 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 119172 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119171 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 119112 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119111 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 119052 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119051 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 118992 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118991 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 118932 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118931 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 118873 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118872 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 118814 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118813 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 118754 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118753 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118713 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95865 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 95924 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95925 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 95984 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95985 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 96044 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96045 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 96104 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96105 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 96164 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96165 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 96224 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96225 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 96283 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96284 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 96342 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96343 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 96402 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 96403 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96443
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119240 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119181 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119180 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 119121 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119120 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 119061 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119060 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 119001 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119000 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 118941 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118940 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 118881 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118880 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 118822 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118821 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 118763 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118762 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 118703 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118702 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118662 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95810 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 95869 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95870 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 95929 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95930 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 95989 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95990 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 96049 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96050 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 96109 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96110 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 96169 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96170 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 96228 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 96287 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96288 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 96347 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 96348 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96388
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31508443 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 31508502 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508503 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 31508562 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508563 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 31508622 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508623 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 31508682 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508683 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 31508742 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508743 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 31508802 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 31508803 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 31508861 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508862 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 31508920 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508921 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 31508980 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508981 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 31509021 Score = 442 bits (223), Expect = e-121 Identities = 237/239 (99%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 343 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccct 402 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc-taaggcccct 11513259 Query: 403 aaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgccta 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11513258 aaatgaccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgccta 11513200 Query: 463 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513199 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 11513140 Query: 523 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513139 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 11513081 Score = 268 bits (135), Expect = 2e-68 Identities = 135/135 (100%) Strand = Plus / Minus Query: 447 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 507 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 567 atgcatcggtagggg 581 ||||||||||||||| Sbjct: 27320543 atgcatcggtagggg 27320529 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagc-taaggcccctaaatgaccgcttagtg 25722120 Query: 419 ataaaggaggtggggg 434 |||||||||||||||| Sbjct: 25722119 ataaaggaggtggggg 25722104 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 261 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 315 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496 Score = 61.9 bits (31), Expect = 2e-06 Identities = 38/39 (97%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatcaccagcctaaggccc 400 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccag-ctaaggccc 28582290
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 84153 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 84094 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84093 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 84034 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84033 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 83974 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83973 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 83914 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83913 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 83854 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83853 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 83794 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 83793 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 83735 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83734 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 83676 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83675 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 83616 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 83615 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 83575
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119260 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119201 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119200 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 119141 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119140 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 119081 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119080 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 119021 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119020 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 118961 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118960 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 118901 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118900 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 118842 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118841 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 118783 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118782 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 118723 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118722 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118682 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95858 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 95917 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95918 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 95977 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95978 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 96037 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96038 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 96097 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96098 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 96157 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96158 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 96217 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96218 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 96276 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96277 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 96335 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96336 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 96395 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 96396 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96436
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14632 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 14691 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14692 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 14751 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14752 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 14811 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14812 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 14871 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14872 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 14931 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14932 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 14991 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 14992 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 15050 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15051 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 15109 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15110 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 15169 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 15170 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 15210 Score = 1088 bits (549), Expect = 0.0 Identities = 576/581 (99%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 122907 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-taggtg 122965 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122966 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 123025 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123026 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 123085 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123086 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 123145 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123146 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 123205 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123206 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 123265 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123266 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 123324 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123325 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 123383 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123384 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 123443 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123444 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 123484
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 141440 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 141499 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141500 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 141559 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141560 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 141619 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141620 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 141679 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141680 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 141739 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141740 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 141799 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141800 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 141858 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141859 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 141917 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141918 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 141977 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141978 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 142018
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 20867 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 20926 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20927 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 20986 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20987 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 21046 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21047 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 21106 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21107 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 21166 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21167 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 21226 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 21227 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 21285 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21286 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 21344 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21345 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 21404 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 21405 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 21445 Score = 1082 bits (546), Expect = 0.0 Identities = 576/582 (98%), Gaps = 3/582 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 44251 cgtagtgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 44192 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44191 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 44132 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtg-aaatgccactcgaacccagagct 179 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 44131 gttgaagaatcagcggatgagttgtggttaggggtgtaaatgccactcgaacccagagct 44072 Query: 180 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 239 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44071 agttggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 44012 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44011 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 43952 Query: 300 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43951 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 43892 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 43891 tcgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtga 43833 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43832 taaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 43774 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43773 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 43714 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 43713 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 43672
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 880 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 821 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 820 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 761 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 760 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 701 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 641 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 640 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 581 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 580 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 521 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 520 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 462 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 461 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 403 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 343 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 302
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9268792 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 9268851 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268852 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 9268911 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268912 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 9268971 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268972 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 9269031 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269032 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 9269091 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269092 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 9269151 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9269152 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 9269210 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269211 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 9269269 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269270 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 9269329 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269330 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9269370 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9056706 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 9056765 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056766 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 9056825 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056826 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 9056885 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056886 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 9056945 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056946 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 9057005 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057006 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 9057065 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9057066 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 9057124 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057125 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 9057183 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057184 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 9057243 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057244 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9057284 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 9228292 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctaggtg 9228351 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228352 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 9228411 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228412 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 9228471 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228472 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 9228531 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228532 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 9228591 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228592 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 9228651 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9228652 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 9228710 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228711 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 9228769 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228770 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 9228829 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228830 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9228870 Score = 1088 bits (549), Expect = 0.0 Identities = 576/581 (99%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 9164881 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaac-taggtg 9164939 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164940 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 9164999 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165000 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 9165059 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165060 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 9165119 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165120 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 9165179 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165180 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 9165239 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9165240 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 9165298 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165299 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 9165357 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165358 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 9165417 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165418 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9165458
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19938777 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 19938836 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938837 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 19938896 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938897 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 19938956 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938957 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 19939016 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939017 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 19939076 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939077 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 19939136 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19939137 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 19939195 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939196 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 19939254 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939255 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 19939314 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939315 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 19939355 Score = 1108 bits (559), Expect = 0.0 Identities = 576/579 (99%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10387644 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 10387703 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387704 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 10387763 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387764 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 10387823 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387824 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 10387883 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387884 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 10387943 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387944 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 10388003 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10388004 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 10388062 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388063 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 10388121 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388122 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 10388181 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 579 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10388182 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 10388220 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10276654 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 10276595 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276594 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 10276535 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276534 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 10276475 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276474 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 10276415 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276414 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 10276355 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276354 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 10276295 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10276294 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 10276236 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276235 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 10276177 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276176 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagca 10276117 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276116 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 10276076 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 501 gatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 268 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 327 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 328 tcggccagtgagacgatgggggataagcttcatcgtcgagag 369 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 31598959 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 31599018 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599019 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 31599078 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599079 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 31599138 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599139 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 31599198 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599199 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 31599258 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599259 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 31599318 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 31599319 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 31599377 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599378 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 31599436 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599437 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 31599496 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599497 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 31599537 Score = 442 bits (223), Expect = e-121 Identities = 237/239 (99%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 343 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccct 402 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc-taaggcccct 11510022 Query: 403 aaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgccta 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 11510021 aaatgaccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgccta 11509963 Query: 463 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509962 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 11509903 Query: 523 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509902 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 11509844 Score = 268 bits (135), Expect = 2e-68 Identities = 135/135 (100%) Strand = Plus / Minus Query: 447 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 507 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 567 atgcatcggtagggg 581 ||||||||||||||| Sbjct: 27411866 atgcatcggtagggg 27411852 Score = 119 bits (60), Expect = 1e-23 Identities = 73/76 (96%), Gaps = 1/76 (1%) Strand = Plus / Minus Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagc-taaggcccctaaatgaccgcttagtg 25813429 Query: 419 ataaaggaggtggggg 434 |||||||||||||||| Sbjct: 25813428 ataaaggaggtggggg 25813413 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 261 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 315 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570 Score = 61.9 bits (31), Expect = 2e-06 Identities = 38/39 (97%), Gaps = 1/39 (2%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatcaccagcctaaggccc 400 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccag-ctaaggccc 28673614
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 33526275 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 33526334 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526335 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 33526394 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526395 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 33526454 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526455 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 33526514 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526515 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 33526574 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526575 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 33526634 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 33526635 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 33526693 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526694 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 33526752 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526753 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 33526812 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526813 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 33526853 Score = 327 bits (165), Expect = 2e-86 Identities = 206/217 (94%), Gaps = 7/217 (3%) Strand = Plus / Plus Query: 352 aagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccg 411 |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagc-taaggcccctaaatgaccg 527809 Query: 412 ctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcc 471 ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 527810 ctcagtgataaaggaggtggggg-tgcaaagac-----ggaggtttgcctaaaagcagcc 527863 Query: 472 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527864 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 527923 Query: 532 ggctaagcgatctgccgaagctgtgggatgtcaaaat 568 |||||||||||||||| |||||||||||||||||||| Sbjct: 527924 ggctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 501 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 542 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 47266 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 47207 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47206 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 47147 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47146 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 47087 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47086 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 47027 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47026 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 46967 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46966 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 46907 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 46906 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 46848 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46847 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 46789 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46788 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 46729 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 46728 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 46688
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 71472 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 71531 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71532 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 71591 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71592 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 71651 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71652 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 71711 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71712 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 71771 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71772 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 71831 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 71832 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 71890 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71891 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 71949 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71950 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 72009 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 72010 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 72050
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123090 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 123031 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123030 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 122971 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122970 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 122911 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122910 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 122851 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122850 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 122791 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122790 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 122731 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122730 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 122672 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122671 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 122613 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122612 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 122553 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122552 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 122512 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99747 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 99806 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99807 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 99866 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99867 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 99926 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99927 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 99986 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99987 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 100046 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100047 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 100106 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100107 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 100165 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100166 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 100224 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100225 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 100284 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100285 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 100325
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 244 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 303 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 363 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 423 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 483 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 484 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 543 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 603 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 604 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 662 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 721 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 781 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 822
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 439 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 498 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 558 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 618 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 678 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 738 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 798 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 799 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 857 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 916 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 976 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1017
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 310 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 369 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 370 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 429 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 430 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 489 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 490 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 549 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 550 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 609 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 610 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 669 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 670 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 728 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 729 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 787 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 788 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 847 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 888
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 441 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 500 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 560 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 620 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 680 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 740 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 800 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 801 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 859 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 918 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 919 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 978 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 979 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1019
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 179 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 239 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 299 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 359 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 419 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 420 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 478 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 537 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 597 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 638
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 260 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 319 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 320 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 379 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 380 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 439 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 440 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 499 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 500 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 559 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 619 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 620 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 678 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 737 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 797 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 798 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 838
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 439 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 498 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 499 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 558 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 559 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 618 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 619 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 678 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 738 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 739 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 798 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 799 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 857 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 858 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 916 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 976 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 977 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1017
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 62 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 121 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 181 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 241 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 242 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 301 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 302 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 361 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 362 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 421 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 422 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 480 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 539 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 599 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 600 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 640
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 19950053 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 19950112 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950113 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 19950172 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950173 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 19950232 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950233 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 19950292 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950293 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 19950352 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950353 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 19950412 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 19950413 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 19950471 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950472 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 19950530 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950531 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 19950590 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950591 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 19950631 Score = 1108 bits (559), Expect = 0.0 Identities = 576/579 (99%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10393683 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 10393742 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393743 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 10393802 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393803 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 10393862 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393863 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 10393922 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393923 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 10393982 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393983 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 10394042 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10394043 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 10394101 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394102 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 10394160 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394161 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 10394220 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 579 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10394221 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 10394259 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10282693 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 10282634 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282633 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 10282574 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282573 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 10282514 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282513 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 10282454 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282453 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 10282394 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282393 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 10282334 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 10282333 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 10282275 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282274 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 10282216 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282215 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagca 10282156 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282155 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 10282115 Score = 77.8 bits (39), Expect = 4e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 501 gatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 268 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 327 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 328 tcggccagtgagacgatgggggataagcttcatcgtcgagag 369 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123807 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 123748 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123747 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 123688 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123687 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 123628 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123627 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 123568 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123567 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 123508 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123507 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 123448 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 123447 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 123389 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123388 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 123330 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123329 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 123270 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123269 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 123229 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 100424 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 100483 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100484 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 100543 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100544 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 100603 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100604 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 100663 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100664 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 100723 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100724 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 100783 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100784 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 100842 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100843 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 100901 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100902 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 100961 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100962 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 101002
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 119234 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119175 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119174 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 119115 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119114 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 119055 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119054 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 118995 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118994 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 118935 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118934 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 118875 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 118874 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 118816 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 118757 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118756 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 118697 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 118696 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 118656 Score = 1112 bits (561), Expect = 0.0 Identities = 578/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 95805 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 95864 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95865 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 95924 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95925 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 95984 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95985 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 96044 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96045 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 96104 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96105 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 96164 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 96165 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 96223 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96224 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 96282 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96283 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 96342 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 96343 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 96383
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1108 bits (559), Expect = 0.0 Identities = 576/579 (99%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 94036 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 94095 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94096 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 94155 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94156 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 94215 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94216 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 94275 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94276 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 94335 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94336 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 94395 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 94396 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 94454 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94455 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 94513 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94514 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 94573 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 579 ||||||||||||||||||||||||||||||||||||||| Sbjct: 94574 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 94612
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1108 bits (559), Expect = 0.0 Identities = 576/579 (99%), Gaps = 2/579 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 28100 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 28159 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28160 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 28219 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28220 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 28279 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28280 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 28339 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28340 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 28399 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28400 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 28459 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28460 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 28518 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28519 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 28577 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28578 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 28637 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 579 ||||||||||||||||||||||||||||||||||||||| Sbjct: 28638 atctgccgaagctgtgggatgtcaaaatgcatcggtagg 28676
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 118207 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 118148 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118147 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 118088 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118087 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 118028 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118027 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 117968 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117967 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 117908 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117907 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 117848 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 117847 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 117789 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117788 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 117730 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117729 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagca 117670 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 117669 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 117629
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 57979 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 57920 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57919 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 57860 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57859 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 57800 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57799 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 57740 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57739 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 57680 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57679 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 57620 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 57619 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 57561 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57560 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 57502 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57501 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagca 57442 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 57441 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 57401
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9241489 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 9241430 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9241429 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgat 9241370 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241369 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 9241310 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241309 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 9241250 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241249 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 9241190 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241189 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 9241130 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 9241129 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 9241071 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241070 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 9241012 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241011 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 9240952 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240951 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 9240911 Score = 182 bits (92), Expect = 9e-43 Identities = 132/144 (91%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 233 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 292 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 293 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 352 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 353 agcttcatcgtcgagagggaaaca 376 ||||||||||||||||| |||||| Sbjct: 3580430 agcttcatcgtcgagagagaaaca 3580407 Score = 107 bits (54), Expect = 4e-20 Identities = 87/98 (88%), Gaps = 5/98 (5%) Strand = Plus / Minus Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggg-----tgcaaagacag 446 ||||| || ||||||||||||| ||| ||||| ||||||||||| |||||||||| Sbjct: 3580381 ctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaagacaa 3580322 Query: 447 ccaggaggtttgcctagaagcagccaccctttaaagag 484 |||||||||||||||||||||||||||||||||||||| Sbjct: 3580321 ccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagct 553 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 550 agctgtgggatgtcaaaatgcatcggtagggg 581 |||| |||||| |||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtagggg 3580254
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 52702 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 52643 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 52642 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgtctgat 52583 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52582 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 52523 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52522 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 52463 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52462 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 52403 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52402 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 52343 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52342 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 52284 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52283 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 52225 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52224 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 52165 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 52164 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 52124
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1096 bits (553), Expect = 0.0 Identities = 576/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 438 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 497 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 498 atctatccatgaccaggatgaagcttggatgaaaccaagcagaggtccgaaccgactgat 557 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 558 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 617 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 618 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 677 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 678 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 737 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 738 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 797 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 798 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 856 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 857 agaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 915 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 916 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 975 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1016
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1049 bits (529), Expect = 0.0 Identities = 572/581 (98%), Gaps = 4/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 123030 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 122971 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122970 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 122911 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122910 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 122851 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122850 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 122791 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122790 actgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 122732 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122731 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 122672 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 122671 cgtcgagagggaaacagcccggatcaccag-ctaaggccccttaatgaccgctcagtgat 122613 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 122612 aaaggaggt-gggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaa 122554 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 122553 agagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcg 122495 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122494 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 122454 Score = 1049 bits (529), Expect = 0.0 Identities = 572/581 (98%), Gaps = 4/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 99707 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 99766 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99767 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 99826 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99827 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 99886 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99887 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 99946 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99947 actgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 100005 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100006 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 100065 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 100066 cgtcgagagggaaacagcccggatcaccag-ctaaggccccttaatgaccgctcagtgat 100124 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 100125 aaaggaggt-gggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaa 100183 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 100184 agagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcg 100242 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100243 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 100283
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1049 bits (529), Expect = 0.0 Identities = 572/581 (98%), Gaps = 4/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6060 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 6119 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6120 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 6179 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6180 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 6239 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6240 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 6299 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6300 actgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 6358 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6359 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 6418 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 6419 cgtcgagagggaaacagcccggatcaccag-ctaaggccccttaatgaccgctcagtgat 6477 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 6478 aaaggaggt-gggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaa 6536 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 6537 agagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcg 6595 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 6596 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 6636
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1049 bits (529), Expect = 0.0 Identities = 572/581 (98%), Gaps = 4/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 648 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 707 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 767 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 827 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 887 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 888 actgtttcggtgc-ggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 946 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 947 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 1006 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1007 cgtcgagagggaaacagcccggatcaccag-ctaaggccccttaatgaccgctcagtgat 1065 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1066 aaaggaggt-gggggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaa 1124 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct: 1125 agagtgcgtaatagctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcg 1183 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1184 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1224
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1001 bits (505), Expect = 0.0 Identities = 564/581 (97%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 141471 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 141412 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 141411 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 141352 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141351 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 141292 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141291 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 141232 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 141231 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 141172 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 141171 atgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcat 141112 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 141111 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 141053 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 141052 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 140994 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 140993 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 140934 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 140933 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 140893 Score = 1001 bits (505), Expect = 0.0 Identities = 564/581 (97%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 112186 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 112245 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 112246 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 112305 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112306 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 112365 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112366 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 112425 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112426 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 112485 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 112486 atgaccccaaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcat 112545 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 112546 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 112604 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 112605 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 112663 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 112664 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 112723 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 112724 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 112764
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 993 bits (501), Expect = 0.0 Identities = 563/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 138868 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 138809 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 138808 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 138749 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138748 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 138689 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138688 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 138629 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138628 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 138569 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 138568 atgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagcttcat 138509 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138508 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 138450 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 138449 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 138391 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 138390 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 138331 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 138330 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 138290 Score = 993 bits (501), Expect = 0.0 Identities = 563/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110229 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 110288 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 110289 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 110348 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110349 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 110408 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110409 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 110468 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110469 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 110528 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110529 atgacctcaaaataacaggggtcgaggtcggccagtgagacgatgggggataagcttcat 110588 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110589 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 110647 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 110648 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 110706 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110707 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 110766 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 110767 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 110807
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 993 bits (501), Expect = 0.0 Identities = 563/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131031 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 130972 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 130971 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 130912 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130911 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 130852 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130851 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 130792 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130791 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 130732 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130731 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 130672 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130671 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 130613 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 130612 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 130554 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 130553 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 130494 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 130493 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 130453 Score = 993 bits (501), Expect = 0.0 Identities = 563/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 103604 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 103663 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 103664 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 103723 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103724 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 103783 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103784 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 103843 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 103844 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 103903 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103904 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 103963 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 103964 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 104022 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 104023 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 104081 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104082 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 104141 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 104142 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 104182
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 993 bits (501), Expect = 0.0 Identities = 563/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 633 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 692 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 693 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 752 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 812 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 872 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 873 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 932 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 933 atgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagcttcat 992 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 993 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1051 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1052 aaaggaggt-aggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaa 1110 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1111 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1170 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1171 atctgccgaagctgtgggatgtaaaaatgcatccgtagggg 1211
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 993 bits (501), Expect = 0.0 Identities = 563/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 637 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 696 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 697 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 756 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 816 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 876 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 877 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 936 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 996 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 997 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1055 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 1056 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 1114 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1115 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1174 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1175 atctgccgaagctgtgggatgtaaaaaggcatcggtagggg 1215
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 991 bits (500), Expect = 0.0 Identities = 563/581 (96%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 127227 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 127168 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 127167 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 127108 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127107 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 127048 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127047 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 126988 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 126987 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 126928 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126927 atgacccca----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 126872 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 126871 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 126813 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 126812 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 126754 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 126753 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 126694 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 126693 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 126653 Score = 991 bits (500), Expect = 0.0 Identities = 563/581 (96%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 107695 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 107754 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 107755 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 107814 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107815 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 107874 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107875 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 107934 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107935 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 107994 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107995 atgacccca----aacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 108050 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 108051 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 108109 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 108110 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 108168 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 108169 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 108228 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 108229 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 108269
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 132139 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 132080 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 132079 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 132020 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132019 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 131960 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131959 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 131900 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131899 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 131840 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131839 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 131780 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 131779 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 131721 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 131720 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 131662 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131661 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 131602 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 131601 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 131561 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104739 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 104798 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 104799 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 104858 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104859 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 104918 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104919 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 104978 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104979 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 105038 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105039 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 105098 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 105099 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 105157 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 105158 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 105216 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105217 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 105276 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 105277 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 105317
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 135265 cgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 135206 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 135205 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 135146 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135145 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 135086 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135085 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 135026 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135025 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 134966 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134965 atgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 134906 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134905 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 134847 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134846 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134788 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134787 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134728 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 134727 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 134687 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 106641 cgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 106700 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106701 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106760 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106761 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106820 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106821 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106880 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106881 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106940 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106941 atgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 107000 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107001 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 107059 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 107060 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 107118 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 107119 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107178 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 107179 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 107219
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 136302 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 136243 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 136242 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 136183 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136182 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 136123 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136122 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 136063 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136062 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 136003 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 136002 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 135943 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135942 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 135884 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 135883 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 135825 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135824 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 135765 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135764 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 135724 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 107255 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 107314 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 107315 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 107374 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107375 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 107434 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107435 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 107494 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107495 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 107554 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107555 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 107614 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107615 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 107673 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 107674 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 107732 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 107733 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107792 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107793 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 107833
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 142243 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 142184 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 142183 atctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgat 142124 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142123 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 142064 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142063 gctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 142004 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 142003 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 141944 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 141943 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttgat 141884 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 141883 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 141825 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141824 aaaggaggt-aggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaa 141766 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 141765 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 141706 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 141705 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 141665 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 111085 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 111144 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 111145 atctatccatgaccaggatgaagcttggatgaaactaagcggaggtccgaaccgactgat 111204 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111205 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 111264 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111265 gctcgttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 111324 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 111325 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 111384 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 111385 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttgat 111444 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 111445 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 111503 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 111504 aaaggaggt-aggggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaa 111562 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 111563 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 111622 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 111623 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 111663
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 656 cgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtg 715 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 716 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 775 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 835 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 895 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 896 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 955 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 956 atgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagcttcat 1015 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1016 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1074 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 1075 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 1133 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1134 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1193 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 1194 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 1234
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135956 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 135897 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 135896 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 135837 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135836 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 135777 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135776 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 135717 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135716 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 135657 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135656 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 135597 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135596 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 135538 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 135537 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 135479 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135478 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 135419 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135418 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 135378 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106469 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106528 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106529 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106588 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106589 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106648 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106649 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106708 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106709 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106768 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106769 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 106828 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106829 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106887 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106888 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106946 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106947 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107006 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107007 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 107047
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 135544 cgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 135485 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 135484 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 135425 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135424 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 135365 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135364 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 135305 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135304 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 135245 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135244 atgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 135185 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 135184 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 135126 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 135125 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 135067 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135066 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 135007 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 135006 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 134966 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 106863 cgtagcgaaagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 106922 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106923 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106982 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106983 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 107042 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107043 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 107102 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107103 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 107162 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107163 atgatctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 107222 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 107223 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 107281 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 107282 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 107340 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 107341 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107400 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 107401 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 107441
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 985 bits (497), Expect = 0.0 Identities = 563/581 (96%), Gaps = 3/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 133586 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 133527 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 133526 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 133467 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133466 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 133407 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 133406 gctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagc 133347 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133346 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 133287 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133286 atgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcat 133228 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133227 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 133169 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| || Sbjct: 133168 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagccgccacccttgaa 133110 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 133109 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 133050 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 133049 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 133009 Score = 985 bits (497), Expect = 0.0 Identities = 563/581 (96%), Gaps = 3/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 104385 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 104444 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 104445 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 104504 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104505 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 104564 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104565 gctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagc 104624 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104625 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 104684 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104685 atgacccaaaaatcaca-gggtcaaggtcggccagtgagacgatgggggataagcttcat 104743 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104744 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 104802 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||| || Sbjct: 104803 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagccgccacccttgaa 104861 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104862 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 104921 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 104922 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 104962
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 132132 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 132073 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 132072 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 132013 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132012 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 131953 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131952 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 131893 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 131892 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 131833 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131832 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 131773 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 131772 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 131714 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 131713 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 131655 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131654 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 131595 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 131594 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 131554 Score = 985 bits (497), Expect = 0.0 Identities = 562/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104737 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 104796 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 104797 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 104856 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104857 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 104916 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104917 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 104976 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104977 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 105036 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105037 atgacctcaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 105096 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 105097 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 105155 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 105156 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 105214 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105215 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 105274 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 105275 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 105315
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135664 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 135605 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 135604 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 135545 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135544 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 135485 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135484 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 135425 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135424 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 135365 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135364 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 135305 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 135304 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 135246 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 135245 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 135187 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135186 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 135127 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135126 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 135086 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106966 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 107025 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 107026 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 107085 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107086 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 107145 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107146 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 107205 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107206 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 107265 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107266 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 107325 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 107326 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 107384 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 107385 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 107443 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 107444 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107503 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107504 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 107544
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2160 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 2219 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 2220 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 2279 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2280 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 2339 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2340 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 2399 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2400 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 2459 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2460 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 2519 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 2520 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 2578 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 2579 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 2637 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 2638 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 2697 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2698 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 2738
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 635 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 694 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 695 atctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 754 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 755 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 814 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 874 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 875 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 934 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 935 atgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttcat 994 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 995 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1053 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 1054 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 1112 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1113 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1172 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1173 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 1213
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134910 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 134851 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 134850 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 134791 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134790 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 134731 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134730 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 134671 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134670 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 134611 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134610 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 134551 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134550 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 134492 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134491 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134433 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134432 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134373 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134372 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134332 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106126 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106185 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106186 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106245 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106246 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106305 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106306 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106365 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106366 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106425 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106426 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 106485 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106486 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106544 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106545 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106603 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106604 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 106663 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106664 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106704
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 132362 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 132303 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 132302 atctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 132243 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132242 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 132183 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132182 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 132123 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 132122 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 132063 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 132062 atgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttcat 132003 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132002 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 131944 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 131943 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 131885 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 131884 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 131825 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 131824 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 131784 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 104402 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 104461 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 104462 atctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 104521 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104522 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 104581 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104582 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 104641 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104642 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 104701 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 104702 atgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttcat 104761 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104762 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 104820 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 104821 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 104879 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104880 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 104939 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 104940 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 104980
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135045 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 134986 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 134985 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 134926 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134925 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 134866 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134865 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 134806 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134805 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 134746 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134745 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 134686 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134685 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 134627 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134626 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134568 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134567 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134508 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134507 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134467 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106298 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106357 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106358 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106417 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106418 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106477 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106478 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106537 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106538 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106597 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106598 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 106657 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106658 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106716 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106717 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106775 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106776 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 106835 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106836 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106876
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135043 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 134984 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 134983 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 134924 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134923 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 134864 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134863 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 134804 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134803 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 134744 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134743 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 134684 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134683 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 134625 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134624 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134566 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134565 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134506 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134505 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134465 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106295 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106354 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106355 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106414 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106415 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106474 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106475 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106534 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106535 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106594 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106595 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 106654 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106655 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106713 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106714 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106772 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106773 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 106832 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106833 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106873
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134955 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 134896 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 134895 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 134836 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134835 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 134776 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134775 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 134716 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134715 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 134656 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134655 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 134596 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134595 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 134537 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134536 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134478 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134477 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134418 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134417 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134377 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106173 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106232 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106233 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106292 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106293 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106352 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106353 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106412 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106413 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106472 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106473 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 106532 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106533 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106591 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106592 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106650 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106651 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 106710 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106711 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106751
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 133323 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 133264 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 133263 atctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 133204 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133203 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 133144 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133143 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 133084 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 133083 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 133024 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 133023 atgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttcat 132964 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 132963 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 132905 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 132904 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 132846 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 132845 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 132786 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 132785 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 132745 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105326 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 105385 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 105386 atctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 105445 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105446 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 105505 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105506 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 105565 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 105566 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 105625 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 105626 atgacctcaaaataactggggtcaaggtcggccagtgagacggtgggggataagcttcat 105685 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 105686 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 105744 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 105745 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 105803 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 105804 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 105863 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 105864 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 105904
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135662 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 135603 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 135602 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 135543 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135542 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 135483 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135482 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 135423 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135422 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 135363 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135362 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 135303 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 135302 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 135244 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 135243 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 135185 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 135184 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 135125 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 135124 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 135084 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106964 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 107023 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 107024 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 107083 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107084 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 107143 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107144 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 107203 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107204 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 107263 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107264 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 107323 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 107324 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 107382 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 107383 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 107441 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 107442 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107501 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107502 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 107542
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 135393 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 135334 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 135333 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 135274 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135273 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 135214 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135213 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 135154 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135153 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 135094 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 135093 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 135034 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 135033 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 134975 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134974 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134916 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134915 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134856 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134855 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 134815 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106745 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106804 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106805 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106864 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106865 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106924 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106925 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106984 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106985 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 107044 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107045 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 107104 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 107105 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 107163 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 107164 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 107222 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 107223 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 107282 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 107283 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 107323
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 139073 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 139014 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 139013 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 138954 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138953 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 138894 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138893 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 138834 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 138833 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 138774 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138773 atgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagcttcat 138714 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 138713 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 138655 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 138654 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 138596 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 138595 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 138536 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 138535 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 138495 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110226 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 110285 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 110286 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 110345 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110346 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 110405 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110406 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 110465 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110466 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 110525 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110526 atgacctccaaataataggggtcaaggtcggccagtgagacgatgggggataagcttcat 110585 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110586 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 110644 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 110645 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 110703 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110704 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 110763 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 110764 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 110804
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 977 bits (493), Expect = 0.0 Identities = 561/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 733 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 792 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 793 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 852 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 912 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 913 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 972 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 973 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 1032 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1033 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 1092 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct: 1093 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgatcgctcagtgat 1151 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 1152 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 1210 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1211 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1270 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| ||||| |||||||||||| Sbjct: 1271 atctgccgaagctgtgggatgtaaaaatacatcggtagggg 1311
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 975 bits (492), Expect = 0.0 Identities = 563/584 (96%), Gaps = 7/584 (1%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138947 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 138888 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 138887 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 138828 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138827 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 138768 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138767 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 138708 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 302 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 138707 tgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 138648 Query: 303 gaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 357 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138647 gaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 138588 Query: 358 catcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagt 417 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 138587 catcgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagt 138529 Query: 418 gataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 477 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 138528 gataaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 138470 Query: 478 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 537 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 138469 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 138410 Query: 538 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 138409 gcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 138366 Score = 975 bits (492), Expect = 0.0 Identities = 563/584 (96%), Gaps = 7/584 (1%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110998 tagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtgat 111057 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 111058 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 111117 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111118 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 111177 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111178 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 111237 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 302 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 111238 tgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 111297 Query: 303 gaccc-----aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 357 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111298 gaccccaaaacaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 111357 Query: 358 catcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagt 417 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 111358 catcgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagt 111416 Query: 418 gataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 477 |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 111417 gataaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccaccctt 111475 Query: 478 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 537 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 111476 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 111535 Query: 538 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 111536 gcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 111579
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 973 bits (491), Expect = 0.0 Identities = 508/511 (99%), Gaps = 2/511 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 441 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 500 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 560 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 620 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 680 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 740 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 800 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 801 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 859 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 860 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 918 Query: 481 agagtgcgtaatagctcactgatcgagcgcc 511 ||||||||||||||||||||||||||||||| Sbjct: 919 agagtgcgtaatagctcactgatcgagcgcc 949
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 969 bits (489), Expect = 0.0 Identities = 560/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 131155 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 131096 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 131095 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 131036 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131035 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 130976 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130975 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 130916 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130915 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 130856 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130855 atgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 130796 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130795 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 130737 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 130736 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 130678 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 130677 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 130618 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| |||| |||||||||||| Sbjct: 130617 gtctgccgaagctgtgggatgtaaaaaaacatcggtagggg 130577 Score = 969 bits (489), Expect = 0.0 Identities = 560/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 102290 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 102349 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 102350 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 102409 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102410 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 102469 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102470 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 102529 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 102530 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 102589 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102590 atgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 102649 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 102650 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 102708 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 102709 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 102767 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 102768 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 102827 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| |||| |||||||||||| Sbjct: 102828 gtctgccgaagctgtgggatgtaaaaaaacatcggtagggg 102868
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 969 bits (489), Expect = 0.0 Identities = 560/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134922 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 134863 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 134862 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 134803 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134802 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 134743 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134742 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 134683 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 134682 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagat 134623 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 134622 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 134563 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 134562 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 134504 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 134503 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 134445 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 134444 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 134385 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 134384 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 134344 Score = 969 bits (489), Expect = 0.0 Identities = 560/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 106140 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 106199 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 106200 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106259 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106260 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106319 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106320 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106379 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 106380 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagat 106439 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 106440 atgacctcaaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttcat 106499 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106500 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106558 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106559 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106617 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106618 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 106677 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||| ||||| |||||||||||| Sbjct: 106678 gtctgccgaagctgtgggatgtaaaaatacatcggtagggg 106718
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 961 bits (485), Expect = 0.0 Identities = 529/541 (97%), Gaps = 2/541 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122570 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 122511 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 122510 atctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgactgat 122451 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122450 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 122391 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122390 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 122331 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 122330 actgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagat 122271 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 122270 atgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagcttcat 122211 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 122210 cgtcgagagggaaacagcctggatcaccag-ctaaggcccctaaatgaccgctcaatgat 122152 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122151 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 122093 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 122092 agagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcg 122033 Query: 541 a 541 | Sbjct: 122032 a 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 961 bits (485), Expect = 0.0 Identities = 529/541 (97%), Gaps = 2/541 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12825111 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 12825052 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 12825051 atctatccatgaccaggatgaagcttggatgaaactaagcagaggttcgaaccgactgat 12824992 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824991 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 12824932 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824931 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 12824872 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 12824871 actgtttcggtgcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagat 12824812 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 12824811 atgacccaaaaataataggattcaaagtcggccagtgagacgatgggggataagcttcat 12824752 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 ||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| Sbjct: 12824751 cgtcgagagggaaacagcctggatcaccag-ctaaggcccctaaatgaccgctcaatgat 12824693 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824692 aaaggaggt-gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 12824634 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 12824633 agagtgcgtaatagctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcg 12824574 Query: 541 a 541 | Sbjct: 12824573 a 12824573
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 957 bits (483), Expect = 0.0 Identities = 548/567 (96%), Gaps = 2/567 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 617 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 676 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 677 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 736 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 737 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 796 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 797 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 856 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 857 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 916 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 917 atgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 976 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| Sbjct: 977 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgcccagtgat 1035 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 1036 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 1094 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1095 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1154 Query: 541 atctgccgaagctgtgggatgtcaaaa 567 |||||||||||||||||||||| |||| Sbjct: 1155 atctgccgaagctgtgggatgtaaaaa 1181
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 954 bits (481), Expect = 0.0 Identities = 558/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 642 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 701 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 702 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 761 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 821 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 881 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 882 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 941 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 942 atgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 1001 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1002 cgtccagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1060 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| |||||||||||||||||||||| |||||||||||||| || Sbjct: 1061 aaaggaggt-aggggtgcagagacagccaggaggtttgcctaaaagcagccacccttgaa 1119 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| || Sbjct: 1120 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaaacg 1179 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||| |||||||||||| Sbjct: 1180 atctgccgaagctgtgggatgtaaaaaaacatcggtagggg 1220
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 954 bits (481), Expect = 0.0 Identities = 558/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| Sbjct: 131231 cgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtg 131172 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 131171 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 131112 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131111 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 131052 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 131051 gctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagc 130992 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 130991 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 130932 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 130931 atgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagcttcat 130872 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 130871 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 130813 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| || Sbjct: 130812 aaaggaggt-aggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaa 130754 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 130753 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 130694 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||| | ||||||||||| Sbjct: 130693 atctgccgaagctgtgggatgtaaaaaagaatcggtagggg 130653 Score = 954 bits (481), Expect = 0.0 Identities = 558/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||| Sbjct: 104163 cgtagcgaaagcgagtcttcacagggcaattgtcactgcttatggacccgaacctgggtg 104222 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 104223 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 104282 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104283 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 104342 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 104343 gctggttctccccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagc 104402 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 104403 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 104462 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104463 atgacctcaaaataacaagggtcaaggtcggccagtgagacgatgggggataagcttcat 104522 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104523 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 104581 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||| || Sbjct: 104582 aaaggaggt-aggggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaa 104640 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 104641 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 104700 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||| | ||||||||||| Sbjct: 104701 atctgccgaagctgtgggatgtaaaaaagaatcggtagggg 104741
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 954 bits (481), Expect = 0.0 Identities = 558/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 129894 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 129835 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 129834 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 129775 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129774 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 129715 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 129714 gctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagc 129655 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 129654 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 129595 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 129594 atgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagcttcat 129535 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 129534 cgtcgagagggaaacagcccagatcaccag-ctaaggcccctaaatgaccgctcagtgat 129476 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 129475 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 129417 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 129416 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 129357 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 129356 atctgccgaagctgtgggatgtaaaaatgaatcggtagggg 129316 Score = 954 bits (481), Expect = 0.0 Identities = 558/581 (96%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 102562 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 102621 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 102622 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 102681 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102682 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 102741 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 102742 gctggttctccccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagc 102801 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 102802 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 102861 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||||| Sbjct: 102862 atgacctgaaaataataagggtcaaggtcggccagtgagacgatgagggataagcttcat 102921 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 102922 cgtcgagagggaaacagcccagatcaccag-ctaaggcccctaaatgaccgctcagtgat 102980 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 102981 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 103039 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 103040 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 103099 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 103100 atctgccgaagctgtgggatgtaaaaatgaatcggtagggg 103140
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 950 bits (479), Expect = 0.0 Identities = 557/581 (95%), Gaps = 9/581 (1%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 134348 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 134289 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 134288 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 134229 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134228 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 134169 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134168 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 134109 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134108 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 134049 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||| || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134048 atgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagcttcat 133996 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133995 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 133937 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 133936 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 133878 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 133877 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 133818 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 133817 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 133777 Score = 950 bits (479), Expect = 0.0 Identities = 557/581 (95%), Gaps = 9/581 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 105934 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 105993 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 105994 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 106053 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106054 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 106113 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106114 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 106173 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106174 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 106233 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||| || ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106234 atgatcccaaa-------gggtcaaggtcggccagtgagacgatgggggataagcttcat 106286 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 106287 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 106345 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 106346 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 106404 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 106405 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 106464 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 106465 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 106505
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 948 bits (478), Expect = 0.0 Identities = 559/582 (96%), Gaps = 3/582 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1131 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 1190 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 1191 atctatccatgaccaggatgaagcttgggtgaaactaagtgagggtccgaaccgactgat 1250 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1251 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 1310 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1311 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 1370 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1371 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 1430 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgat-gggggataagcttca 359 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1431 atgacctccaaataacaggggtcaaggtcggccagtgagacgatggggggataagcttca 1490 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1491 tcgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtga 1549 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 1550 taaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 1608 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 1609 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 1668 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 1669 gatctgccgaagctgtgggatgtaaaaaaacatcggtagggg 1710
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 934 bits (471), Expect = 0.0 Identities = 560/583 (96%), Gaps = 5/583 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 2404 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 2463 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagagg-tccgaaccgactga 119 |||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||| Sbjct: 2464 atctatccatgaccaggatgaagcttgggtgaaactaagtggagggtccgaaccgactga 2523 Query: 120 tgttgaagaatcagcggatgagttgtggttaggggtgaaatg-ccactcgaacccagagc 178 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2524 tgttgaagaatcagcggatgagttgtggttaggggtgaaatggccactcgaacccagagc 2583 Query: 179 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2584 tagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaa 2643 Query: 239 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 ||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 2644 gcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactag 2703 Query: 299 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 358 ||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2704 atatgactc-aaaataacaggggtcaaggtcggctagtgagacgatgggggataagcttc 2762 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct: 2763 atcgtcgagagggaaacagtccggatcaccag-ctaaggcccctaaatgaccgctcagtg 2821 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 2822 ataaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttg 2880 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 ||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 2881 aaagagtgcgtaatagcscactgatcgagcgctcttgcgccgaagatgaacggggctaag 2940 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 2941 cgatctgccgaagctgtgggatgtaaaaatacatcggtagggg 2983
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 930 bits (469), Expect = 0.0 Identities = 555/581 (95%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 644 cgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtg 703 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| Sbjct: 704 atctatccatgaccaggatggagcttgggtgaaactaagtggaggtccgaaccgactgat 763 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 823 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 883 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 884 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 943 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 944 atgacctcaaaataacaggggttaaggtcggccagtgagacaatgggggataagcttcat 1003 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct: 1004 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcaatgat 1062 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| || Sbjct: 1063 aaaggaggt-aggggtgcacagacagccacgaggtttgcctataagcagccacccttgaa 1121 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| || Sbjct: 1122 agagtgcgtaatagctcactgatcgagcgctcttgcgcccaagatgaacggggctaaacg 1181 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 1182 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 1222
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 930 bits (469), Expect = 0.0 Identities = 555/581 (95%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 655 cgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtg 714 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 715 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 774 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 775 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 834 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 894 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 895 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 954 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 955 atgacctcaaaataacaggggttaaggtcggccagtgagaccatgggggataagcttcat 1014 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1015 cgtccagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1073 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||| || Sbjct: 1074 aaaggaggt-aggggtgcagagacagccaagaggtttgcctagaagcagccacccttgaa 1132 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||| ||||| ||||||| || ||||||||||||||||| Sbjct: 1133 agagtgcgtaatagctcactgatccagcgctcttgcgcccaaaatgaacggggctaagcg 1192 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1193 atctgccgaagctgtgggatgtaaaaatgcatccgtagggg 1233
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 930 bits (469), Expect = 0.0 Identities = 555/581 (95%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 656 cgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtg 715 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 716 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 775 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 835 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 836 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaaagc 895 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| || Sbjct: 896 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaaat 955 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 956 atgacctcaaaataacaggggttaaggtcggccagtgagacgatgggggataagcttcat 1015 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1016 cgtccagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1074 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||| |||||||||||| |||||||||||||| || Sbjct: 1075 aaaggaggt-aggggtgcacagacagccaagaggtttgcctaaaagcagccacccttgaa 1133 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 ||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 1134 agagtgcgtaataactcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 1193 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||| ||||||| Sbjct: 1194 atctgccgaagctgtgggatgtaaaaatgcatccgtagggg 1234
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 898 bits (453), Expect = 0.0 Identities = 540/567 (95%), Gaps = 9/567 (1%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 139724 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 139665 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 139664 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 139605 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139604 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 139545 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139544 gctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagc 139485 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 139484 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 139425 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 || || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139424 ctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcat 139372 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 139371 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 139313 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 139312 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 139254 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 139253 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 139194 Query: 541 atctgccgaagctgtgggatgtcaaaa 567 |||||||||||||||||||||| |||| Sbjct: 139193 atctgccgaagctgtgggatgtaaaaa 139167 Score = 898 bits (453), Expect = 0.0 Identities = 540/567 (95%), Gaps = 9/567 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 110336 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 110395 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 110396 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 110455 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110456 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 110515 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 110516 gctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagc 110575 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 110576 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 110635 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 || || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 110636 ctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcat 110688 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 110689 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 110747 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 110748 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 110806 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 110807 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 110866 Query: 541 atctgccgaagctgtgggatgtcaaaa 567 |||||||||||||||||||||| |||| Sbjct: 110867 atctgccgaagctgtgggatgtaaaaa 110893
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 894 bits (451), Expect = 0.0 Identities = 535/561 (95%), Gaps = 9/561 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 121 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 180 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 181 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 240 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 300 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 301 gctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagc 360 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 361 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 420 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 || || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 ctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcat 473 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 474 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 532 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 533 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 591 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 592 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 651 Query: 541 atctgccgaagctgtgggatg 561 ||||||||||||||||||||| Sbjct: 652 atctgccgaagctgtgggatg 672
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 892 bits (450), Expect = 0.0 Identities = 550/581 (94%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 656 cgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatggacccgaacctgggtg 715 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 716 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 775 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 835 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 836 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 895 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 896 actgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaactctgaatactagat 955 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||| | |||||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 956 atgacc------tcacaggggttaaggtcggccaatgagacgatgggggataagcttcat 1009 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 | || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1010 cttccagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 1068 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 1069 aaaggaggt-aggggtgcaaagacagccacgaggtttgcctagaagcagccacccttgaa 1127 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| || |||||||||||||| || Sbjct: 1128 agagtgcgtaatagctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaacg 1187 Query: 541 atctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||| |||||||||||||||||| Sbjct: 1188 atctgccgaagctgtgggatgtaaaaatgcatcggtagggg 1228
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 892 bits (450), Expect = 0.0 Identities = 554/582 (95%), Gaps = 5/582 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 177480 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 177539 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||| Sbjct: 177540 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccga-ccgactgat 177598 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 177599 gttgaagaatcagcgggtgagttgtggttaggggtgaaatgccactcgcacccagagcta 177658 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177659 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 177718 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 || |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 177719 acggtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 177778 Query: 301 atgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttca 359 |||||| ||||||| | |||| |||||||||| |||||||||||||||||||||||||| Sbjct: 177779 atgacctcaaaataagaggggggcaaggtcggctagtgagacgatgggggataagcttca 177838 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 177839 tcgtcgagagggaaagagcccggatcaccag-ctaaggcccctaaatgaccgctcagtga 177897 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 177898 taaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttga 177956 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 177957 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagc 178016 Query: 540 gat-ctgccgaagctgtgggatgtcaaaatgcatcggtaggg 580 ||| |||||||||||||||||||||||||| |||||| |||| Sbjct: 178017 gatcctgccgaagctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 aggcccctaaatgaccgctcag 416 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 890 bits (449), Expect = 0.0 Identities = 555/584 (95%), Gaps = 6/584 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct--ggg 58 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||| Sbjct: 650 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaaccctgggg 709 Query: 59 tgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactg 118 |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 710 tgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactg 769 Query: 119 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 770 atgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagc 829 Query: 179 tagctggttctcccc-gaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 237 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 830 tagctggttctcccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 889 Query: 238 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 |||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct: 890 agcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatacta 949 Query: 298 gatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 357 ||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 950 gatatgacctaaaaataacaagggtcaaggtcggcaagtgagacgatgggggataagctt 1009 Query: 358 catcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagt 417 ||||||||||||||||||||||| ||||||| | ||||||||||||||||| |||||||| Sbjct: 1010 catcgtcgagagggaaacagccctgatcacccg-ctaaggcccctaaatgatcgctcagt 1068 Query: 418 gataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 477 |||||||||||| |||||||| |||||||||||||||||| ||| |||||||||||||| Sbjct: 1069 gataaaggaggt-aggggtgcagagacagccaggaggtttg-ctataagcagccaccctt 1126 Query: 478 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 537 |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 1127 gaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaa 1186 Query: 538 gcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 | ||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1187 gtgatctgccgaagctgtgggatgtaaaaaggcatcggtagggg 1230
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 880 bits (444), Expect = 0.0 Identities = 548/580 (94%), Gaps = 2/580 (0%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 52048 tagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgat 51989 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 51988 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 51929 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51928 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 51869 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51868 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 51809 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-ata 301 |||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 51808 tgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaata 51749 Query: 302 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 361 ||||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 51748 tgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatc 51689 Query: 362 gtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgata 421 ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| Sbjct: 51688 gtcgagagggaaacagcccggatcaccag-ctaaggcccctaattgatcgctcagtgata 51630 Query: 422 aaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 481 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 51629 aaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaa 51570 Query: 482 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 541 ||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||| Sbjct: 51569 gagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcga 51510 Query: 542 tctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 | |||||||||||||||||| |||| |||||||||||| Sbjct: 51509 ttcgccgaagctgtgggatgtaaaaagacatcggtagggg 51470 Score = 880 bits (444), Expect = 0.0 Identities = 548/580 (94%), Gaps = 2/580 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 37780 tagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgat 37839 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 37840 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 37899 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37900 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 37959 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37960 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 38019 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-ata 301 |||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 38020 tgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaata 38079 Query: 302 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 361 ||||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 38080 tgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatc 38139 Query: 362 gtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgata 421 ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| Sbjct: 38140 gtcgagagggaaacagcccggatcaccag-ctaaggcccctaattgatcgctcagtgata 38198 Query: 422 aaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 481 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 38199 aaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaa 38258 Query: 482 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 541 ||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||| Sbjct: 38259 gagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcga 38318 Query: 542 tctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 | |||||||||||||||||| |||| |||||||||||| Sbjct: 38319 ttcgccgaagctgtgggatgtaaaaagacatcggtagggg 38358
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 880 bits (444), Expect = 0.0 Identities = 548/580 (94%), Gaps = 2/580 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 4708 tagcgaaagcgagtattcatagggcaattgtcactgcttatggacccgaacctgggtgat 4767 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 4768 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 4827 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4828 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 4887 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4888 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 4947 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-ata 301 |||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 4948 tgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaata 5007 Query: 302 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 361 ||||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5008 tgacctacaaataataggggtaaaggtcggccagtgagacgatgggggataagcttcatc 5067 Query: 362 gtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgata 421 ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||| Sbjct: 5068 gtcgagagggaaacagcccggatcaccag-ctaaggcccctaattgatcgctcagtgata 5126 Query: 422 aaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 481 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 5127 aaggaggttaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaa 5186 Query: 482 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 541 ||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||| Sbjct: 5187 gagtgcgtaatagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcga 5246 Query: 542 tctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 | |||||||||||||||||| |||| |||||||||||| Sbjct: 5247 ttcgccgaagctgtgggatgtaaaaagacatcggtagggg 5286
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 870 bits (439), Expect = 0.0 Identities = 551/583 (94%), Gaps = 4/583 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 638 cgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtg 697 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 698 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 757 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 817 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 818 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 877 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 878 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaga 937 Query: 300 tatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttc 358 ||||| || |||||||||||| | |||||| ||||||||||| ||||||||||||||| Sbjct: 938 tatgatccccaaataacaggggataaaggtcaaccagtgagacggtgggggataagcttc 997 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 998 atcgtcaagagggaaacagcccagatcaccag-ctaaggcccctaaatgaccgctcagtg 1056 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 gtaaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttg 1115 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| Sbjct: 1116 aaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaag 1175 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 || ||||||||||||||||||||||||||| |||||||||||| Sbjct: 1176 cggtctgccgaagctgtgggatgtcaaaatacatcggtagggg 1218
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 858 bits (433), Expect = 0.0 Identities = 520/547 (95%), Gaps = 9/547 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 137 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 196 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 197 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 256 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 257 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccgctcgaacccagagcta 316 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 317 gctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagc 376 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 377 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 436 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 || || |||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 ctggcctcaaaa-------ggtcaaggtcggccagtgagacgatgggggataagcttcat 489 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 490 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 548 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 549 aaaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 607 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 608 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 667 Query: 541 atctgcc 547 ||||||| Sbjct: 668 atctgcc 674
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 854 bits (431), Expect = 0.0 Identities = 536/567 (94%), Gaps = 3/567 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||| || ||||| | |||||||||||||||||||||||||||||||||| Sbjct: 637 tagcgaaagcgagtattcataggactattgtcactgcttatggacccgaacctgggtgat 696 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||| Sbjct: 697 ctatccatgaccaggatgaagctttggtgaaactaagtggaggtccgaaccgactgatgt 756 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 816 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 817 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 876 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag-ata 301 |||||| |||||||| | | ||||||||||||||||| |||||||||||||||||| ||| Sbjct: 877 tgtttcagtgcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaata 936 Query: 302 tgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatc 361 ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 937 tgacctaaaaataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatc 996 Query: 362 gtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgata 421 ||||||||||||||||||| ||||||||| ||||||||||||| ||| |||||||||||| Sbjct: 997 gtcgagagggaaacagcccagatcaccag-ctaaggcccctaattgatcgctcagtgata 1055 Query: 422 aaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 481 |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1056 aaggaggt-aggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaa 1114 Query: 482 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 541 |||||||||||||| ||||||||||||| ||||||| |||||| ||||||||||||||| Sbjct: 1115 tagtgcgtaatagcttactgatcgagcgctcttgcgccgaagattaacggggctaagcga 1174 Query: 542 tctgccgaagctgtgggatgtcaaaat 568 || |||||||||||||||||| ||||| Sbjct: 1175 tccgccgaagctgtgggatgtaaaaat 1201
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 839 bits (423), Expect = 0.0 Identities = 547/583 (93%), Gaps = 4/583 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 117511 cgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtg 117452 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 117451 atctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 117392 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117391 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 117332 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 117331 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 117272 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 117271 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaga 117212 Query: 300 tatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttc 358 ||||| || |||||| | ||||| | |||| ||||||||||| ||||||||||||||| Sbjct: 117211 tatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataagcttc 117152 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct: 117151 atcgtcaagagggaaacagcccagatcaccag-ctaaggcccctaaatgaccgctaagtg 117093 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117092 gtaaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttg 117034 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| Sbjct: 117033 aaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaag 116974 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 || ||||||||||||||||||||||||||| |||||||||||| Sbjct: 116973 cggtctgccgaagctgtgggatgtcaaaatacatcggtagggg 116931 Score = 839 bits (423), Expect = 0.0 Identities = 547/583 (93%), Gaps = 4/583 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 90591 cgtagcgaaagcgagtcttcctagggcaattgtcactacttatggacccgaacctgggtg 90650 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 90651 atctaaccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 90710 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90711 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 90770 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 90771 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 90830 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 90831 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaga 90890 Query: 300 tatgacccaaaaataaca-ggggtcaaggtcggccagtgagacgatgggggataagcttc 358 ||||| || |||||| | ||||| | |||| ||||||||||| ||||||||||||||| Sbjct: 90891 tatgatccccaaataatagggggtaatggtcaaccagtgagacggtgggggataagcttc 90950 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| |||| Sbjct: 90951 atcgtcaagagggaaacagcccagatcaccag-ctaaggcccctaaatgaccgctaagtg 91009 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91010 gtaaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttg 91068 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| Sbjct: 91069 aaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaag 91128 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 || ||||||||||||||||||||||||||| |||||||||||| Sbjct: 91129 cggtctgccgaagctgtgggatgtcaaaatacatcggtagggg 91171
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 829 bits (418), Expect = 0.0 Identities = 431/434 (99%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 551 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 610 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 670 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 730 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 790 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 850 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 910 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 911 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctcagtgat 969 Query: 421 aaaggaggtggggg 434 ||||||||| |||| Sbjct: 970 aaaggaggtagggg 983
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 825 bits (416), Expect = 0.0 Identities = 545/582 (93%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 86901 cgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 86960 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 86961 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 87020 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87021 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 87080 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaag 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 87081 gctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaag 87140 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 87141 cactgtttcggtacgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaga 87200 Query: 300 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 359 | || ||| ||||| |||||| | |||| |||||||||||||||||||||||||||| Sbjct: 87201 t-tgcccc---aataaaaggggtaagggtcaaccagtgagacgatgggggataagcttca 87256 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 87257 tcgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgaccgctcagtga 87315 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 | ||||| || | |||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 87316 tgaaggaagt-acgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttga 87374 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||| Sbjct: 87375 aagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgggactaagc 87434 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87435 gatctgccgaagctgtgggatgtcaaaatacatcggtagggg 87476
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 823 bits (415), Expect = 0.0 Identities = 545/583 (93%), Gaps = 4/583 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| | |||| ||||||||| |||||||||||||||||||||| Sbjct: 638 cgtagcgaaagcgagtcttcctggggcaattgtcactacttatggacccgaacctgggtg 697 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||||||||||||||||| || |||||||||| ||||||||||||||||||| Sbjct: 698 atctatccatgaccaggatgaagctcgggtgaaactaagtggaggtccgaaccgactgat 757 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 758 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 817 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 818 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 877 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 878 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaga 937 Query: 300 tatgacccaaaaataacagggg-tcaaggtcggccagtgagacgatgggggataagcttc 358 ||||| | |||||| |||| | | |||| ||||||||||| ||||||||||||||| Sbjct: 938 tatgatctccgaataacgggggataagggtcaaccagtgagacggtgggggataagcttc 997 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 998 atcgtcgagagggaaacagcccagatcaccag-ctaaggcccctaaatgaccgctcagtg 1056 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 gtaaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttg 1115 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||| ||||| ||||||| ||||||||||||| ||||| Sbjct: 1116 aaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaacgggactaag 1175 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 || |||||||||||||||||||||||||| |||||||||||| Sbjct: 1176 cggtctgccgaagctgtgggatgtcaaaaaacatcggtagggg 1218
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 799 bits (403), Expect = 0.0 Identities = 547/588 (93%), Gaps = 9/588 (1%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 145921 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 145862 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 145861 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 145802 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 145801 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagcta 145742 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 145741 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 145682 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145681 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 145622 Query: 300 tatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataa 353 ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||||||| Sbjct: 145621 tatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataa 145562 Query: 354 gcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgct 413 |||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| Sbjct: 145561 gcttcatcgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgaccgct 145503 Query: 414 cagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccac 473 ||||| | |||||||| || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 145502 cagtggtgaaggaggt-aggagtgcagagacagccaggaagtttgcctagaagcagccac 145444 Query: 474 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 533 |||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||| Sbjct: 145443 ccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacggga 145384 Query: 534 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 145383 ctaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtagggg 145336 Score = 799 bits (403), Expect = 0.0 Identities = 547/588 (93%), Gaps = 9/588 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 112541 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 112600 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 112601 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 112660 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 112661 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccagagcta 112720 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 112721 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 112780 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 112781 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 112840 Query: 300 tatga--cccaa---aaataacagg-ggtcaaggtcggccagtgagacgatgggggataa 353 ||||| |||| ||| |||||| ||| |||||| |||||||||||| |||||||||| Sbjct: 112841 tatgatctccaaatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataa 112900 Query: 354 gcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgct 413 |||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| Sbjct: 112901 gcttcatcgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgaccgct 112959 Query: 414 cagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccac 473 ||||| | |||||||| || ||||| |||||||||||| |||||||||||||||||||| Sbjct: 112960 cagtggtgaaggaggt-aggagtgcagagacagccaggaagtttgcctagaagcagccac 113018 Query: 474 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 533 |||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||| Sbjct: 113019 ccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacggga 113078 Query: 534 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 113079 ctaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtagggg 113126
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 797 bits (402), Expect = 0.0 Identities = 412/414 (99%), Gaps = 1/414 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 436 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 495 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 496 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 555 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 615 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 616 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 675 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 676 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 735 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 795 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctc 414 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 796 cgtcgagagggaaacagcccggatcaccag-ctaaggcccctaaatgaccgctc 848
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 783 bits (395), Expect = 0.0 Identities = 540/582 (92%), Gaps = 6/582 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||| Sbjct: 88987 cgtagcgagagcgagtcttcatggggcaattgtcactgcttatggacccgaacctgggtg 89046 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 89047 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 89106 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89107 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 89166 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaag 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 89167 gctggttctccccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaag 89226 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 89227 cactgtttcggtacgggccacgagagcggtaccaaatcgaggcaaactctgaatactaga 89286 Query: 300 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 359 | | ||||| | || ||||| | |||| |||||||||||||||||||||||||||| Sbjct: 89287 t-taccccaata--aaagggggtaagggtcaaccagtgagacgatgggggataagcttca 89343 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 |||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 89344 tcgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgaccgctcagtga 89402 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 | ||||| || | |||||||||||||||||||||||||||||||||||||| |||| | Sbjct: 89403 tgaaggaagt-acgagtgcaaagacagccaggaggtttgcctagaagcagccaaccttga 89461 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||||||||| | ||||| ||||||||||||| |||||| Sbjct: 89462 aagagtgcgtaatagctcactgatcgagcgctcgtgcgccgaagatgaacgggactaagc 89521 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 89522 gatctgccgaagctgtgggatgtaaaaatacatcggtagggg 89563
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 769 bits (388), Expect = 0.0 Identities = 398/400 (99%), Gaps = 1/400 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 644 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 703 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 763 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 764 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 823 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 883 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 884 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 943 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 1003 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggccc 400 |||||||||||||||||||||||||||||| ||||||||| Sbjct: 1004 cgtcgagagggaaacagcccggatcaccag-ctaaggccc 1042
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 759 bits (383), Expect = 0.0 Identities = 537/583 (92%), Gaps = 4/583 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||| |||||| | |||| |||||||||||||||||||||||||||||||| Sbjct: 642 cgtagcgaaagcaagtcttcctggggcaattgtcactgcttatggacccgaacctgggtg 701 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 702 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 761 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 821 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| Sbjct: 822 gctggttctccccgaaatgcgttgaggcgcagcagttgactagactatctaggggtaaag 881 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || Sbjct: 882 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactgga 941 Query: 300 tatgacccaaaaataacag-gggtcaaggtcggccagtgagacgatgggggataagcttc 358 || ||| | ||||| || | || | |||| |||||||||| ||||||||||||||| Sbjct: 942 taggactccctaataatagagagtaagggtcaaccagtgagacagtgggggataagcttc 1001 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 || |||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||| Sbjct: 1002 attgtcgagaggggaacagcccagatcacc-ggctaaggcccctaaatgaccgctaagtg 1060 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 |||||||||| || |||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1061 gtaaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccatccttg 1119 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||| ||||| ||||||| ||||||||| ||| ||||| Sbjct: 1120 aaagagtgcgtaatagctcactgatcaagcgctcttgcgccgaagatgaatgggactaag 1179 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 || ||||||||||||||||||||||||||| |||||||||||| Sbjct: 1180 cggtctgccgaagctgtgggatgtcaaaatacatcggtagggg 1222
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 749 bits (378), Expect = 0.0 Identities = 534/582 (91%), Gaps = 3/582 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| Sbjct: 127803 cgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtg 127744 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 127743 atctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgat 127684 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127683 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 127624 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| Sbjct: 127623 gctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaag 127564 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 127563 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactagg 127504 Query: 300 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 359 |||||||| || ||| ||| | |||| |||||||||||||||||||||||||||| Sbjct: 127503 tatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttca 127444 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 | |||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 127443 ttgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgactgctcagtgg 127385 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 127384 taaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttaa 127326 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| Sbjct: 127325 aagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaagt 127266 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 | ||||||||||||||| ||||||||| |||||||||||| Sbjct: 127265 ggtctgccgaagctgtgagatgtcaaaggacatcggtagggg 127224 Score = 749 bits (378), Expect = 0.0 Identities = 534/582 (91%), Gaps = 3/582 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||| Sbjct: 95644 cgtagcgaaagcgagtcttcctagggcaattgtcactgctcatggacccgaacctgggtg 95703 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 95704 atctatccatgaccaggatgaagcttgggtaaaactaagtggaggtccgaaccgactgat 95763 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95764 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 95823 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| Sbjct: 95824 gctggttctccccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaag 95883 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 95884 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactagg 95943 Query: 300 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 359 |||||||| || ||| ||| | |||| |||||||||||||||||||||||||||| Sbjct: 95944 tatgacccccgaagaacggggaaaagggtcaaccagtgagacgatgggggataagcttca 96003 Query: 360 tcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtga 419 | |||||||||| |||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 96004 ttgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgactgctcagtgg 96062 Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 |||||||||| || ||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 96063 taaaggaggt-aggagtgcaaagacagccaggaggtttgcctagaagcagccacccttaa 96121 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 ||||||||||||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| Sbjct: 96122 aagagtgcgtaatagctcactgatcaagcgctcttacgccgaaaatgaacgggactaagt 96181 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 | ||||||||||||||| ||||||||| |||||||||||| Sbjct: 96182 ggtctgccgaagctgtgagatgtcaaaggacatcggtagggg 96223
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 660 bits (333), Expect = 0.0 Identities = 336/337 (99%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 337 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 278 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 218 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 158 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 98 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 97 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 38 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtg 337 ||||||||||||||||||||||||||||||||||||| Sbjct: 37 atgacccaaaaataacaggggtcaaggtcggccagtg 1
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 648 bits (327), Expect = 0.0 Identities = 507/562 (90%), Gaps = 5/562 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| ||||||| | ||||| ||||||||||||||||| |||||||| Sbjct: 643 tagcgaaagcaagtcttcatagggcaaatgtcattgcttatggacccgaacttgggtgat 702 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||||||| |||||| |||| |||||||||| ||||||||||||||||||||| Sbjct: 703 ctaaccatgaccaagatgaaatttggttgaaactaagtggaggtccgaaccgactgatgt 762 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||| || |||||| |||||| Sbjct: 763 tgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcaaacccaaagctagt 822 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 ||||||||||||||||||||| |||||||| |||| || |||||||||||||||||||| Sbjct: 823 tggttctccccgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaaagcac 881 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 302 ||||||||| |||| ||| |||| ||||||||| |||||||||| |||||||||||||| Sbjct: 882 tgtttcggttcgggtcgcgagagccgtaccaaattgaggcaaactatgaatactagatat 941 Query: 303 gac--ccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 360 ||| ||||||||||||||| | ||||| | |||||||||| |||||||||||||||||| Sbjct: 942 gacctccaaaaataacagggataaaggtggaccagtgagaccatgggggataagcttcat 1001 Query: 361 cgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgat 420 ||||||||||| |||||||| ||||||||| |||||||||||||||||||||| ||| || Sbjct: 1002 cgtcgagaggggaacagcccagatcaccag-ctaaggcccctaaatgaccgctaagttat 1060 Query: 421 aaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 480 ||||||||| |||||||| ||||| |||||||||||||||||||| ||||||||||||| Sbjct: 1061 aaaggaggt-aggggtgcatagacaaccaggaggtttgcctagaagaagccaccctttaa 1119 Query: 481 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 540 |||||||||||||||| ||||||||||||| ||||||| ||| ||||| ||| |||||| Sbjct: 1120 agagtgcgtaatagctaactgatcgagcgctcttgcgccgaatatgaatgggaataagcg 1179 Query: 541 atctgccgaagctgtgggatgt 562 | | |||||||||||||||||| Sbjct: 1180 acccgccgaagctgtgggatgt 1201
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 628 bits (317), Expect = e-177 Identities = 347/357 (97%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 46893 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 46952 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 46953 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 47012 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47013 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 47072 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47073 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 47132 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 47133 actgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 47192 Query: 301 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 357 |||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47193 atgacctccaaataacaggggtcaaggtcggccagtgagacgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 624 bits (315), Expect = e-176 Identities = 358/371 (96%), Gaps = 1/371 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaag-cgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 59 ||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 364818 cgtagcgaaaggcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggt 364877 Query: 60 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 119 |||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct: 364878 gatctatctatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactga 364937 Query: 120 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 179 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364938 tgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 364997 Query: 180 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364998 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 365057 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 365058 cactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaga 365117 Query: 300 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 359 ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 365118 tatgacctcaaaataacaggggtcaaggtcggccagtgagacggtgggggataagcttca 365177 Query: 360 tcgtcgagagg 370 ||||||||||| Sbjct: 365178 tcgtcgagagg 365188 Score = 170 bits (86), Expect = 3e-39 Identities = 128/138 (92%), Gaps = 3/138 (2%) Strand = Plus / Minus Query: 365 gagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgataaag 424 ||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |||||| Sbjct: 129347 gagagggaaacagcccggatcaccagc-taaggcccccaaatggccgctcagttataaag 129289 Query: 425 gaggtggggggtgcaaagacagcca-ggaggtttgcctagaagcagccaccctttaaaga 483 ||||| |||| |||| ||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 129288 gaggtagggg-tgcagagacagccaaggaggtttgcctagaagcagccacccttgaaaga 129230 Query: 484 gtgcgtaatagctcactg 501 | |||||||||||||||| Sbjct: 129229 gcgcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 618 bits (312), Expect = e-174 Identities = 522/586 (89%), Gaps = 7/586 (1%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||| | |||| ||||||||||||||||||| ||||| Sbjct: 138630 cgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtg 138571 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||| Sbjct: 138570 atctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgat 138511 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 138510 gttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagcta 138451 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||||||| || | || | ||||||| Sbjct: 138450 gctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaag 138391 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| | Sbjct: 138390 cactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactggg 138331 Query: 300 tatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatgggggataagctt 357 |||| ||| | | | ||| |||| ||||||||||||||||||| |||||||||||||| Sbjct: 138330 tatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataagctt 138271 Query: 358 catcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagt 417 || ||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 138270 caccgtcgagaggggaacagcccagatcaccag-ctaaggcccctgaatgaccgctcagt 138212 Query: 418 gataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 477 | | |||||||| || |||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 138211 ggtgaaggaggt-aggagtgcaaagacagccgggaggtttgcccagaagcagccaccctt 138153 Query: 478 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 537 |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| |||| Sbjct: 138152 gaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaa 138093 Query: 538 gcgatctgccgaagctgtgggatgtc--aaaatgcatcggtagggg 581 ||| |||||||||||||||||||||| | ||| |||||||||||| Sbjct: 138092 gcggtctgccgaagctgtgggatgtcgaacaatacatcggtagggg 138047 Score = 618 bits (312), Expect = e-174 Identities = 522/586 (89%), Gaps = 7/586 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||| | |||| ||||||||||||||||||| ||||| Sbjct: 83247 cgtagcgaaagcgagtcttcccagggcaactgtcgctgcttatggacccgaacccgggtg 83306 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||| ||| | | ||||||||||||||||||| Sbjct: 83307 atctatccatgaccaggatgaagcttggatagaaccaggtggaggtccgaaccgactgat 83366 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 83367 gttgaaaaatcagcggatgagtcgtggttaggggtgaaatgccactcgaacccggagcta 83426 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgact-ggacatctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||||||| || | || | ||||||| Sbjct: 83427 gctggttctccccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaag 83486 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||| | Sbjct: 83487 cactgttacggtgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactggg 83546 Query: 300 tatgacccaaaaataaca--ggggtcaaggtcggccagtgagacgatgggggataagctt 357 |||| ||| | | | ||| |||| ||||||||||||||||||| |||||||||||||| Sbjct: 83547 tatggccccagagtcacacgagggtgaaggtcggccagtgagacggtgggggataagctt 83606 Query: 358 catcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagt 417 || ||||||||||| |||||||| ||||||||| ||||||||||| |||||||||||||| Sbjct: 83607 caccgtcgagaggggaacagcccagatcaccag-ctaaggcccctgaatgaccgctcagt 83665 Query: 418 gataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 477 | | |||||||| || |||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 83666 ggtgaaggaggt-aggagtgcaaagacagccgggaggtttgcccagaagcagccaccctt 83724 Query: 478 taaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaa 537 |||||||||||| ||||||||||||| ||||| | ||||| || |||||||||| |||| Sbjct: 83725 gaaagagtgcgtagtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaa 83784 Query: 538 gcgatctgccgaagctgtgggatgtc--aaaatgcatcggtagggg 581 ||| |||||||||||||||||||||| | ||| |||||||||||| Sbjct: 83785 gcggtctgccgaagctgtgggatgtcgaacaatacatcggtagggg 83830
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 611 bits (308), Expect = e-171 Identities = 461/508 (90%), Gaps = 3/508 (0%) Strand = Plus / Minus Query: 74 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 133 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 134 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 193 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 194 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 253 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 254 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 313 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 314 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 373 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 374 acagcccggatcaccagcctaaggcccctaaatgaccgctcagtgataaaggaggtgggg 433 ||| || |||||||||| |||||||||||||||||| ||||||||||||||||||| || Sbjct: 2812 acaacctggatcaccag-ctaaggcccctaaatgactgctcagtgataaaggaggt-agg 2755 Query: 434 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 493 ||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| Sbjct: 2754 ggtgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaata 2695 Query: 494 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 553 ||||||| ||||||||| ||||| | |||||||| ||||||||||||||| |||||| Sbjct: 2694 gctcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagct 2635 Query: 554 gtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||| |||||| Sbjct: 2634 atgggatgtcaaaatgcatcgatagggg 2607 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacct 55 ||||||||||||||| ||| |||| ||| ||||||||||||||||||||||| Sbjct: 3172 tagcgaaagcgagtcagaatggggcaattctcactgcttatggacccgaacct 3120
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 587 bits (296), Expect = e-164 Identities = 310/312 (99%), Gaps = 2/312 (0%) Strand = Plus / Minus Query: 270 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 330 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 390 gcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagcca 449 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 399 gc-taaggcccctaaatgaccgctcagtgataaaggaggtggggg-tgcaaagacagcca 342 Query: 450 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 341 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 282 Query: 510 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 569 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 222 Query: 570 catcggtagggg 581 |||||||||||| Sbjct: 221 catcggtagggg 210
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 565 bits (285), Expect = e-158 Identities = 345/361 (95%), Gaps = 3/361 (0%) Strand = Plus / Plus Query: 221 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 280 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 281 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 340 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 341 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccc 400 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag-ctaaggccc 495 Query: 401 ctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcc 460 |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 496 ctaaatgatcgctcagtgataaaggaggt-aggggtgc-gagacagccaggaggtttgcc 553 Query: 461 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 520 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 554 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 613 Query: 521 aagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggg 580 |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 614 aagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtaggg 673 Query: 581 g 581 | Sbjct: 674 g 674 Score = 363 bits (183), Expect = 4e-97 Identities = 198/203 (97%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 96 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 155 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 156 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 215 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 216 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 275 Query: 181 gctggttctccccgaaatgcgtt 203 ||||||||||||||||||||||| Sbjct: 276 gctggttctccccgaaatgcgtt 298
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 551 bits (278), Expect = e-154 Identities = 292/294 (99%), Gaps = 2/294 (0%) Strand = Plus / Plus Query: 288 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 348 ggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatg 407 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagc-taaggcccctaaatg 119 Query: 408 accgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagc 467 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 120 accgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgcctagaagc 178 Query: 468 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 238 Query: 528 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 292
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 515 bits (260), Expect = e-143 Identities = 294/304 (96%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 4527 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 4586 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 4587 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 4646 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4647 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 4706 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 4707 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 4766 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 4767 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 4826 Query: 300 tatg 303 |||| Sbjct: 4827 tatg 4830 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 4918 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagaca 4975 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4976 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 5035 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| | Sbjct: 5036 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcga 5095 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 5096 aatacatcggtagggg 5111
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 515 bits (260), Expect = e-143 Identities = 294/304 (96%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 637 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 696 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 697 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 756 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 816 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 817 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 876 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 877 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 936 Query: 300 tatg 303 |||| Sbjct: 937 tatg 940 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 1028 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagaca 1085 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1086 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 1145 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| | Sbjct: 1146 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcga 1205 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 1206 aatacatcggtagggg 1221
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 515 bits (260), Expect = e-143 Identities = 294/304 (96%), Gaps = 1/304 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 150608 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 150549 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 150548 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 150489 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150488 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 150429 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 150428 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 150369 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 150368 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 150309 Query: 300 tatg 303 |||| Sbjct: 150308 tatg 150305 Score = 515 bits (260), Expect = e-143 Identities = 294/304 (96%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 118058 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 118117 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 118118 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 118177 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118178 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 118237 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 118238 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 118297 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118298 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 118357 Query: 300 tatg 303 |||| Sbjct: 118358 tatg 118361 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Minus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 150217 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagaca 150160 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 150159 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 150100 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| | Sbjct: 150099 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcga 150040 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 150039 aatacatcggtagggg 150024 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 118449 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagaca 118506 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118507 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 118566 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| | Sbjct: 118567 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcga 118626 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 118627 aatacatcggtagggg 118642
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 515 bits (260), Expect = e-143 Identities = 294/304 (96%), Gaps = 1/304 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 637 cgtagcgaaagcgagtcttcctagggcaattgtcactgcttatggacccgaacctgggtg 696 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 697 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 756 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 757 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 816 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 817 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 876 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 877 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagg 936 Query: 300 tatg 303 |||| Sbjct: 937 tatg 940 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 1028 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaagag-tgcaaagaca 1085 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1086 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 1145 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| | Sbjct: 1146 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcga 1205 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 1206 aatacatcggtagggg 1221
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 513 bits (259), Expect = e-142 Identities = 290/299 (96%), Gaps = 1/299 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 115573 cgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtg 115514 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 115513 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 115454 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115453 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 115394 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 115393 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 115334 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115333 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 513 bits (259), Expect = e-142 Identities = 290/299 (96%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 86547 cgtagcgaaagcgagtcttcttagggcaattgtcactgcttatggacccgaacctgggtg 86606 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 86607 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 86666 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86667 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 86726 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 86727 gctggttctccccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaag 86786 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86787 cactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Minus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| || | |||||||||| Sbjct: 115186 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagaca 115129 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 115128 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 115069 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 115068 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaa 115009 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 115008 aatacatcggtagggg 114993 Score = 341 bits (172), Expect = 2e-90 Identities = 237/256 (92%), Gaps = 2/256 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| || | |||||||||| Sbjct: 86934 accagc-taaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagaca 86991 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86992 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatca 87051 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||| Sbjct: 87052 agcgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaa 87111 Query: 566 aatgcatcggtagggg 581 ||| |||||||||||| Sbjct: 87112 aatacatcggtagggg 87127
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 511 bits (258), Expect = e-142 Identities = 291/302 (96%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 4866 cgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtg 4925 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| Sbjct: 4926 atctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactgat 4985 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 4986 gttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaacccagagcta 5045 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5046 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 5105 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5106 actgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 5165 Query: 301 at 302 || Sbjct: 5166 at 5167 Score = 387 bits (195), Expect = e-104 Identities = 242/255 (94%), Gaps = 2/255 (0%) Strand = Plus / Plus Query: 327 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 387 ccagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 446 ||||| |||||||||||||||| |||||||||||||||||||| || | |||| |||||| Sbjct: 5242 ccagc-taaggcccctaaatgatcgctcagtgataaaggaggtaggag-tgcagagacag 5299 Query: 447 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 506 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5300 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 5359 Query: 507 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 566 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 5360 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaa 5419 Query: 567 atgcatcggtagggg 581 ||| ||||||||||| Sbjct: 5420 atgaatcggtagggg 5434
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 511 bits (258), Expect = e-142 Identities = 291/302 (96%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 23059 cgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtg 23000 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||| Sbjct: 22999 atctatccatgaccaggatgaagcttaggtgaaactaagtggaggtccgaaccgactgat 22940 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22939 gttgaaaaatcagcggatgagttgtggttagcggtgaaatgccactcgaacccagagcta 22880 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22879 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 22820 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 22819 actgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 22760 Query: 301 at 302 || Sbjct: 22759 at 22758 Score = 387 bits (195), Expect = e-104 Identities = 242/255 (94%), Gaps = 2/255 (0%) Strand = Plus / Minus Query: 327 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 387 ccagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacag 446 ||||| |||||||||||||||| |||||||||||||||||||| || | |||| |||||| Sbjct: 22683 ccagc-taaggcccctaaatgatcgctcagtgataaaggaggtaggag-tgcagagacag 22626 Query: 447 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 506 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22625 ccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcga 22566 Query: 507 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 566 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 22565 gcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaa 22506 Query: 567 atgcatcggtagggg 581 ||| ||||||||||| Sbjct: 22505 atgaatcggtagggg 22491
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 505 bits (255), Expect = e-140 Identities = 294/307 (95%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 5134 cgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtg 5193 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||| Sbjct: 5194 atctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactgat 5253 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 5254 gttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagcta 5313 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5314 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 5373 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5374 actgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 5433 Query: 301 atgaccc 307 ||||||| Sbjct: 5434 atgaccc 5440 Score = 389 bits (196), Expect = e-105 Identities = 250/264 (94%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 319 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 377 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 378 cccggatcaccagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtg 437 ||| |||||||||| |||||||||||||||| |||||||||||||||||||| || | || Sbjct: 5505 cccagatcaccagc-taaggcccctaaatgatcgctcagtgataaaggaggtaggag-tg 5562 Query: 438 caaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctc 497 || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5563 cagagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctc 5622 Query: 498 actgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 5623 actgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtgg 5682 Query: 558 gatgtcaaaatgcatcggtagggg 581 ||||| |||||| ||||||||||| Sbjct: 5683 gatgtaaaaatgaatcggtagggg 5706
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 505 bits (255), Expect = e-140 Identities = 294/307 (95%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 5134 cgtagcgaaagcgagtcttcatagggctattgtcactgcttatggacccgaacctgggtg 5193 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||||||||||||||| || | |||||||||| ||||||||||||||||||| Sbjct: 5194 atctatccatgaccaggatgaagtttaggtgaaactaagtggaggtccgaaccgactgat 5253 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| Sbjct: 5254 gttgaaaaatcagcggatgagttgtggttagcggtgaaatgccaatcgaacccagagcta 5313 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5314 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 5373 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 5374 actgtttcggcgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat 5433 Query: 301 atgaccc 307 ||||||| Sbjct: 5434 atgaccc 5440 Score = 389 bits (196), Expect = e-105 Identities = 250/264 (94%), Gaps = 3/264 (1%) Strand = Plus / Plus Query: 319 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 377 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 378 cccggatcaccagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtg 437 ||| |||||||||| |||||||||||||||| |||||||||||||||||||| || | || Sbjct: 5505 cccagatcaccagc-taaggcccctaaatgatcgctcagtgataaaggaggtaggag-tg 5562 Query: 438 caaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctc 497 || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5563 cagagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctc 5622 Query: 498 actgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 5623 actgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtgg 5682 Query: 558 gatgtcaaaatgcatcggtagggg 581 ||||| |||||| ||||||||||| Sbjct: 5683 gatgtaaaaatgaatcggtagggg 5706
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1009 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1068 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1069 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1128 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1129 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 486 bits (245), Expect = e-134 Identities = 461/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 484 bits (244), Expect = e-133 Identities = 287/300 (95%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 626 tagcgaaagcgagtcttcccagggcaattgtcactgcttatggacccgaacctgggtgat 685 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| Sbjct: 686 ctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgt 745 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 tgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 805 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 241 ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct: 806 tggttctccccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaaagca 865 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 301 |||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 866 ctgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactggata 925 Score = 329 bits (166), Expect = 6e-87 Identities = 231/250 (92%), Gaps = 2/250 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||||||||| |||| | |||||||| |||| |||||||||||||||| Sbjct: 1015 -taaggcccctaaatgaccgctaagtggtgaaggaggtagggg-tgcaaagacagccagg 1072 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| Sbjct: 1073 aggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgct 1132 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 571 ||||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| || Sbjct: 1133 cttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaataca 1192 Query: 572 tcggtagggg 581 |||||||||| Sbjct: 1193 tcggtagggg 1202
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 478 bits (241), Expect = e-131 Identities = 460/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| |||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 478 bits (241), Expect = e-131 Identities = 460/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1009 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1068 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1069 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1128 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1129 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 478 bits (241), Expect = e-131 Identities = 460/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 ||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 cttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 478 bits (241), Expect = e-131 Identities = 461/528 (87%), Gaps = 6/528 (1%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1009 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1010 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1068 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1069 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1128 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1129 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1176
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 478 bits (241), Expect = e-131 Identities = 460/528 (87%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| || ||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactag-cta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggt-aggggtgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| ||||| ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataagcaatccaccgaagccgtgggatgt 1177
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 470 bits (237), Expect = e-129 Identities = 261/269 (97%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 165 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 224 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 225 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 284 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 285 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 344 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 345 gctggttctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagc 404 Query: 241 actgtttcggtgcgggctgcgcgagcggt 269 ||||||||||||||||| ||| ||||||| Sbjct: 405 actgtttcggtgcgggccgcgagagcggt 433
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 462 bits (233), Expect = e-127 Identities = 285/301 (94%), Gaps = 1/301 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| | |||| |||||||| |||||| ||||||||||||||| Sbjct: 144560 cgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtg 144619 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 144620 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 144679 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144680 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 144739 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 144740 gctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaag 144799 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 144800 caccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaga 144859 Query: 300 t 300 | Sbjct: 144860 t 144860 Score = 462 bits (233), Expect = e-127 Identities = 285/301 (94%), Gaps = 1/301 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| | |||| |||||||| |||||| ||||||||||||||| Sbjct: 88291 cgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataaacccgaacctgggtg 88232 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 88231 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 88172 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88171 gttgaaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 88112 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaag 239 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct: 88111 gctggttctccccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaag 88052 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 88051 caccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaga 87992 Query: 300 t 300 | Sbjct: 87991 t 87991 Score = 337 bits (170), Expect = 2e-89 Identities = 232/250 (92%), Gaps = 2/250 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||||||||||||||| |||||||||| || | |||||||||||||||| Sbjct: 144959 -taaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagacagccagg 145016 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 145017 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgct 145076 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 571 ||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| || Sbjct: 145077 cttgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaaca 145136 Query: 572 tcggtagggg 581 |||||||||| Sbjct: 145137 tcggtagggg 145146 Score = 337 bits (170), Expect = 2e-89 Identities = 232/250 (92%), Gaps = 2/250 (0%) Strand = Plus / Minus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||||||||||||||| |||||||||| || | |||||||||||||||| Sbjct: 87892 -taaggcccctaaatgaccgctcagtggtaaaggaggtaggag-tgcaaagacagccagg 87835 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 87834 aggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgct 87775 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 571 ||||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| || Sbjct: 87774 cttgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaaca 87715 Query: 572 tcggtagggg 581 |||||||||| Sbjct: 87714 tcggtagggg 87705
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 462 bits (233), Expect = e-127 Identities = 458/528 (86%), Gaps = 5/528 (0%) Strand = Plus / Plus Query: 37 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 96 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 97 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 156 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 157 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 216 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 217 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 atccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 277 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 334 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 335 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagccta 394 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| ||| || Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagc-ta 1010 Query: 395 aggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggagg 454 |||||||||||||||| || ||| ||||||||||| |||| |||| | ||| |||||| | Sbjct: 1011 aggcccctaaatgaccactaagttataaaggaggtagggg-tgcataaacaaccaggaag 1069 Query: 455 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 514 |||||||||||| ||||||| ||||||||||||||||||||| |||||||||| || ||| Sbjct: 1070 tttgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgagtgctctt 1129 Query: 515 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | || ||| ||||||||| || || ||| ||||||| ||||||||| Sbjct: 1130 gtgccgaatatgaacgggaataggcaatccaccgaagccgtgggatgt 1177
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 450 bits (227), Expect = e-123 Identities = 248/255 (97%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 161 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 220 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 221 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 280 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 281 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 340 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 240 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 341 gctggctctccccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagc 400 Query: 241 actgtttcggtgcgg 255 ||||||||||||||| Sbjct: 401 actgtttcggtgcgg 415
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 442 bits (223), Expect = e-121 Identities = 237/239 (99%), Gaps = 2/239 (0%) Strand = Plus / Minus Query: 343 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccct 402 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc-taaggcccct 63831 Query: 403 aaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgccta 462 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 63830 aaatgaccgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgccta 63772 Query: 463 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63771 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 63712 Query: 523 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63711 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 63653
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 432 bits (218), Expect = e-118 Identities = 232/234 (99%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 348 ggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatg 407 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagc-taaggcccctaaatg 59 Query: 408 accgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagc 467 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 60 accgctcagtgataaaggaggtggggg-tgcaaagacagccaggaggtttgcctagaagc 118 Query: 468 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 agccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatga 178 Query: 528 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 acggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 232
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 422 bits (213), Expect = e-115 Identities = 285/305 (93%), Gaps = 3/305 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgctt-atggacccgaacctgggt 59 |||||||| |||||||||| ||||||| ||||||||||||| |||||||||||||||||| Sbjct: 5910 cgtagcgagagcgagtcttcatagggcaattgtcactgctttatggacccgaacctgggt 5851 Query: 60 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 119 |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 5850 gatctatccatgaccaggatgaagct-ggatgaaactaagtagaggtccgaaccgactga 5792 Query: 120 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 179 ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5791 tgttgcaaaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 5732 Query: 180 agctggttctccccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaa 238 ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| Sbjct: 5731 agctggttctccccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaa 5672 Query: 239 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 ||||||||||||| ||| | | |||||||| | ||||||||||||| |||||||||| Sbjct: 5671 gcactgtttcggtataggccgtgtaagcggtacgacatcgaggcaaactatgaatactag 5612 Query: 299 atatg 303 ||||| Sbjct: 5611 atatg 5607 Score = 301 bits (152), Expect = 1e-78 Identities = 232/256 (90%), Gaps = 2/256 (0%) Strand = Plus / Minus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||| Sbjct: 5542 accag-ataaggcccctaaatgaccgctcagtgatgaaggatgt-atgagtgcaaagaca 5485 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct: 5484 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcg 5425 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa 565 ||||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || | Sbjct: 5424 agcgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatcta 5365 Query: 566 aatgcatcggtagggg 581 || |||||||||||| Sbjct: 5364 aaaacatcggtagggg 5349
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 410 bits (207), Expect = e-111 Identities = 277/299 (92%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| Sbjct: 754 cgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggtg 813 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||||||||| Sbjct: 814 atctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactgat 873 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||| Sbjct: 874 gttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagcta 933 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 934 gctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaag 993 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 994 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052 Score = 321 bits (162), Expect = 1e-84 Identities = 221/238 (92%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 1123 accagc-taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagaca 1180 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1181 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcg 1240 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1241 agcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtc 1298
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 410 bits (207), Expect = e-111 Identities = 277/299 (92%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| Sbjct: 637 cgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggtg 696 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||||||||| Sbjct: 697 atctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactgat 756 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||| Sbjct: 757 gttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagcta 816 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 817 gctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaag 876 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 877 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935 Score = 329 bits (166), Expect = 6e-87 Identities = 222/238 (93%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 1006 accagc-taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagaca 1063 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1064 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcg 1123 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1124 agcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtc 1181
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 410 bits (207), Expect = e-111 Identities = 277/299 (92%), Gaps = 1/299 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| Sbjct: 650 cgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgggtg 709 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| ||||| ||||| |||||||||| |||| | ||| ||||||||||||||||||| Sbjct: 710 atctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgactgat 769 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||| ||||||||||||||||||||||||||||| | |||||| Sbjct: 770 gttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggagcta 829 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 830 gctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaag 889 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 890 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948 Score = 329 bits (166), Expect = 6e-87 Identities = 222/238 (93%), Gaps = 2/238 (0%) Strand = Plus / Plus Query: 326 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 385 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 386 accagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagaca 445 |||||| |||||||||||||||||||||||||| |||||||||| | | |||||||||| Sbjct: 1019 accagc-taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagaca 1076 Query: 446 gccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcg 505 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1077 gccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcg 1136 Query: 506 agcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 ||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1137 agcgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtc 1194
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 402 bits (203), Expect = e-109 Identities = 265/283 (93%), Gaps = 2/283 (0%) Strand = Plus / Minus Query: 299 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 358 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 ||| || || ||||||||||||||| ||||| |||||||| |||||||||||||| || Sbjct: 580 atcatctcgaaagaaacagcccggatccccagc-taaggcccttaaatgaccgctcaatg 522 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 |||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||| Sbjct: 521 ataaaggaggtggggg-tgcaaagccagccatgaagtttgcctagaagcagccacccttt 463 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 403 Query: 539 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 cgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 360
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 400 bits (202), Expect = e-108 Identities = 263/282 (93%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 23 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 82 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 660 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaa 719 Query: 83 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 142 |||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 143 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 202 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 203 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 261 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 262 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 303 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 900 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 220 bits (111), Expect = 4e-54 Identities = 218/251 (86%), Gaps = 2/251 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 |||||||||||||| | |||| |||| |||||||||| | | |||| |||||||||| Sbjct: 1011 t-taaggcccctaaataatcgctaagtggcaaaggaggtgagag-tgcagagacagccag 1068 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| Sbjct: 1069 gaggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgc 1128 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgc 570 ||||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | | Sbjct: 1129 tcttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtac 1188 Query: 571 atcggtagggg 581 ||||||||||| Sbjct: 1189 atcggtagggg 1199
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 400 bits (202), Expect = e-108 Identities = 263/282 (93%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 23 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 82 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3694 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaa 3753 Query: 83 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 142 |||||| |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 3754 gcttgggtgaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 3813 Query: 143 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 202 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 3814 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 3873 Query: 203 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 261 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 3874 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 3933 Query: 262 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 303 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3934 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975 Score = 228 bits (115), Expect = 2e-56 Identities = 219/251 (87%), Gaps = 2/251 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 |||||||||||||| | |||| |||| |||||||||| | | |||| |||||||||| Sbjct: 4045 t-taaggcccctaaataatcgctaagtggcaaaggaggtgagag-tgcagagacagccag 4102 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| Sbjct: 4103 gaggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgc 4162 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgc 570 ||||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | | Sbjct: 4163 tcttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtac 4222 Query: 571 atcggtagggg 581 ||||||||||| Sbjct: 4223 atcggtagggg 4233
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 394 bits (199), Expect = e-106 Identities = 278/303 (91%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| ||||||| | ||||| |||||||| |||||||| |||||||| Sbjct: 656 tagcgaaagcaagtcttcatagggcaaatgtcattgcttatgtacccgaacttgggtgat 715 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| |||||||||||||||| |||| |||||||||| ||||||||||||||||||||| Sbjct: 716 ctaaccatgaccaggatgaaatttggttgaaactaagtggaggtccgaaccgactgatgt 775 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 776 tgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagc 835 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 ||||||||||||||||||||| ||| ||||||||| || ||||||||||||||||||||| Sbjct: 836 tggttctccccgaaatgcgtttaggggcagcagtt-accggacatctaggggtaaagcac 894 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 302 |||||||||||||| || |||||||||||||| |||||||||| |||||||||||||| Sbjct: 895 tgtttcggtgcgggtctcgagagcggtaccaaattgaggcaaactatgaatactagatat 954 Query: 303 gac 305 ||| Sbjct: 955 gac 957 Score = 303 bits (153), Expect = 3e-79 Identities = 215/233 (92%), Gaps = 2/233 (0%) Strand = Plus / Plus Query: 330 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 389 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 390 gcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagcca 449 || ||||||||||||||||||||| ||| ||||||||||| |||| |||| ||||||||| Sbjct: 1060 gc-taaggcccctaaatgaccgctaagttataaaggaggtagggg-tgcatagacagcca 1117 Query: 450 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 509 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1118 ggaggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcg 1177 Query: 510 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| Sbjct: 1178 ctcttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgt 1230
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 392 bits (198), Expect = e-106 Identities = 262/282 (92%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 23 agggcgattgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaa 82 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 660 agggcgattgtcactgtttatggacccgaacccgggtgatctatccatgaccaggatgaa 719 Query: 83 gcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagt 142 |||||| | |||| ||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct: 720 gcttgggtaaaaccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagt 779 Query: 143 tgtggttaggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgt 202 ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 780 tgtggttaggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgt 839 Query: 203 tgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcg 261 ||||||||||| ||| | ||| | || ||||||||||||||||||||||||||||||||| Sbjct: 840 tgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcggtgcgggctgcg 899 Query: 262 cgagcggtaccaaatcgaggcaaactctgaatactagatatg 303 |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 900 aaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941 Score = 214 bits (108), Expect = 2e-52 Identities = 203/232 (87%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 |||||||||||||| | |||| |||| |||||||||| | | |||| |||||||||| Sbjct: 1011 t-taaggcccctaaataatcgctaagtggcaaaggaggtgagag-tgcagagacagccag 1068 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| Sbjct: 1069 gaggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgc 1128 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 ||||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| Sbjct: 1129 tcttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt 1180
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 387 bits (195), Expect = e-104 Identities = 198/199 (99%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 75058 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 74999 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74998 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 74939 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74938 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 74879 Query: 181 gctggttctccccgaaatg 199 ||||||||||||||||||| Sbjct: 74878 gctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 387 bits (195), Expect = e-104 Identities = 198/199 (99%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 382480 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 382539 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382540 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 382599 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382600 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 382659 Query: 181 gctggttctccccgaaatg 199 ||||||||||||||||||| Sbjct: 382660 gctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Minus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 387 bits (195), Expect = e-104 Identities = 198/199 (99%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 113149 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 113090 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113089 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 113030 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113029 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 112970 Query: 181 gctggttctccccgaaatg 199 ||||||||||||||||||| Sbjct: 112969 gctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 387 bits (195), Expect = e-104 Identities = 201/203 (99%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 367831 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 367772 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367771 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 367712 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367711 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 367652 Query: 181 gctggttctccccgaaatgcgtt 203 |||||||||||||||||| |||| Sbjct: 367651 gctggttctccccgaaattcgtt 367629 Score = 387 bits (195), Expect = e-104 Identities = 201/203 (99%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 184436 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 184377 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184376 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 184317 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184316 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 184257 Query: 181 gctggttctccccgaaatgcgtt 203 |||||||||||||||||| |||| Sbjct: 184256 gctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.032 Identities = 51/60 (85%) Strand = Plus / Plus Query: 442 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 362 gtcgagagggaaacagcccggatc 385 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 387 bits (195), Expect = e-104 Identities = 275/299 (91%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 639 cgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccgggtg 697 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||| Sbjct: 698 atctatccatggccaggatgaagcttgggtgaaaccaagtggaggtccgaaccgactgat 757 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | |||||| Sbjct: 758 gttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagcta 817 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||| | ||| | |||||||||||| Sbjct: 818 gctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaag 877 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 878 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 936 Score = 319 bits (161), Expect = 6e-84 Identities = 220/237 (92%), Gaps = 2/237 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | |||||||||||||||||||||||||| |||||||||| | | |||| |||||||||| Sbjct: 1013 c-taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcagagacagccag 1070 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1071 gaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgc 1130 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 567 ||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 1131 tcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaa 1187
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 373 bits (188), Expect = e-100 Identities = 223/232 (96%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 350 ataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgac 409 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagc-taaggcccctaaatgac 315 Query: 410 cgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcag 469 |||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||||| Sbjct: 316 cgctcagtgataaaggaggtagggg-tgcagagacaaccaggaggtttgcctagaagcag 374 Query: 470 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 529 |||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 375 ccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaac 434 Query: 530 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 435 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggg 486
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 371 bits (187), Expect = 2e-99 Identities = 273/299 (91%), Gaps = 2/299 (0%) Strand = Plus / Minus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 124626 cgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccgggtg 124568 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||||||| Sbjct: 124567 atctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgactgat 124508 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | |||||| Sbjct: 124507 gttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagcta 124448 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||| | ||| | |||||||||||| Sbjct: 124447 gctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaag 124388 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 124387 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 371 bits (187), Expect = 2e-99 Identities = 273/299 (91%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||| Sbjct: 95240 cgtagcgaaagcgagtct-aacagggcgattgtcactgcttatggacccgaacccgggtg 95298 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||| |||||||||||||||| |||| | ||| ||||||||||||||||||| Sbjct: 95299 atctatccatggccaggatgaagcttgggtgaagccaagtggaggtccgaaccgactgat 95358 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||||||||||||| ||||||||| |||||||| ||| |||||| | |||||| Sbjct: 95359 gttgaaaaatcagcggatgagctgtggttagcggtgaaataccaatcgaactcggagcta 95418 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| ||| | ||| | |||||||||||| Sbjct: 95419 gctggttctccccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaag 95478 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 95479 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 95537 Score = 313 bits (158), Expect = 4e-82 Identities = 217/234 (92%), Gaps = 2/234 (0%) Strand = Plus / Minus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | |||||||||||||||||||||||||| |||||||||| | | |||| |||||||||| Sbjct: 124252 c-taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcagagacagccag 124195 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 124194 gaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgc 124135 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 564 ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 124134 tcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 124081 Score = 313 bits (158), Expect = 4e-82 Identities = 217/234 (92%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | |||||||||||||||||||||||||| |||||||||| | | |||| |||||||||| Sbjct: 95614 c-taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcagagacagccag 95671 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 95672 gaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgc 95731 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtca 564 ||||||| ||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 95732 tcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtca 95785
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 369 bits (186), Expect = 7e-99 Identities = 201/206 (97%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 610 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 669 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 670 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 729 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 730 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 789 Query: 181 gctggttctccccgaaatgcgttgag 206 |||||||||||||||||||||||||| Sbjct: 790 gctggttctccccgaaatgcgttgag 815
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 357 bits (180), Expect = 3e-95 Identities = 271/300 (90%), Gaps = 1/300 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| ||||| |||||||||| |||||||||||||| ||||||| Sbjct: 651 tagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaacccgggtgat 710 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||| ||||| Sbjct: 711 ctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccgaccgatgt 770 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||||||| Sbjct: 771 tgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagc 830 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 241 |||||||||||||||||||||||||||||||| || ||||||| ||| |||||||||||| Sbjct: 831 tggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggtaaagca 890 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 301 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 891 ctgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950 Score = 270 bits (136), Expect = 5e-69 Identities = 222/248 (89%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||| | Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagc-t 1025 Query: 394 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 453 |||||||||||||| ||||| |||| ||||||||||||| | |||||||||| |||||| Sbjct: 1026 aaggcccctaaatggccgctaagtggtaaaggaggtgggag-tgcaaagacaatcaggag 1084 Query: 454 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 513 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1085 gtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctct 1144 Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 573 |||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||| Sbjct: 1145 cgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatc 1204 Query: 574 ggtagggg 581 |||||||| Sbjct: 1205 ggtagggg 1212
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 349 bits (176), Expect = 6e-93 Identities = 270/299 (90%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||| Sbjct: 639 tagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgat 697 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||| | ||||||| || || |||||||||||| ||||| Sbjct: 698 ctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgt 757 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| |||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 758 tgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagc 817 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||| |||| | || |||||||||||||| Sbjct: 818 tggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagc 877 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 878 actgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936 Score = 246 bits (124), Expect = 7e-62 Identities = 207/232 (89%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| ||||| |||| |||||| ||| | | |||| ||||| ||||| Sbjct: 1012 -taaggcccctaaatggccgctaagtggcaaaggatgtgagag-tgcagagacaaccagg 1069 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1070 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgct 1129 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 ||||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 1130 cttgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 1181
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 349 bits (176), Expect = 6e-93 Identities = 270/299 (90%), Gaps = 3/299 (1%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||| Sbjct: 115023 tagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgat 114965 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||| | ||||||| || || |||||||||||| ||||| Sbjct: 114964 ctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgt 114905 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| |||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 114904 tgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagc 114845 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||| |||| | || |||||||||||||| Sbjct: 114844 tggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagc 114785 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114784 actgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 349 bits (176), Expect = 6e-93 Identities = 270/299 (90%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||||||||||||||| ||||||| ||| |||||||||| ||||||| Sbjct: 86965 tagcgaaagcgagtcttaatagggcgat-gtcactgtctatagacccgaacccgggtgat 87023 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||| | ||||||| || || |||||||||||| ||||| Sbjct: 87024 ctaaccatggccaggatgaagctttggtgaaactcagtggaagtccgaaccgaccgatgt 87083 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| |||||||||||||||||||||||||||||||| |||||| | |||||||| Sbjct: 87084 tgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagc 87143 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagc 240 ||||||||||||||||||||||||||||||| |||| | || |||||||||||||| Sbjct: 87144 tggttctccccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagc 87203 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87204 actgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262 Score = 246 bits (124), Expect = 7e-62 Identities = 207/232 (89%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| ||||| |||| |||||| ||| | | |||| ||||| ||||| Sbjct: 114650 -taaggcccctaaatggccgctaagtggcaaaggatgtgagag-tgcagagacaaccagg 114593 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 114592 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgct 114533 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 ||||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 114532 cttgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 114481 Score = 246 bits (124), Expect = 7e-62 Identities = 207/232 (89%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| ||||| |||| |||||| ||| | | |||| ||||| ||||| Sbjct: 87338 -taaggcccctaaatggccgctaagtggcaaaggatgtgagag-tgcagagacaaccagg 87395 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 87396 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgct 87455 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 ||||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| Sbjct: 87456 cttgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtc 87507
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 345 bits (174), Expect = 1e-91 Identities = 250/274 (91%), Gaps = 1/274 (0%) Strand = Plus / Plus Query: 31 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggat 90 |||||||| |||| |||||||||| |||||||||||||||| ||||| |||| ||||| | Sbjct: 623 tgtcactgtttatagacccgaacccgggtgatctatccatggccagggtgaaacttgggt 682 Query: 91 gaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtta 150 ||| | ||| ||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 683 gaagccaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggtta 742 Query: 151 ggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgc 210 ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 743 ggggtgaaatgccactcgaactcggagctagctggttctccccgaaatgcgttgaggcgc 802 Query: 211 agcagttgactggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 269 ||| |||| ||||| | ||||||||||||||||||||||||||||||||| |||||| Sbjct: 803 agcgattgattggactacttaggggtaaagcactgtttcggtgcgggctgcgaaagcggt 862 Query: 270 accaaatcgaggcaaactctgaatactagatatg 303 ||||||||||||||||||||||||||||| |||| Sbjct: 863 accaaatcgaggcaaactctgaatactaggtatg 896 Score = 315 bits (159), Expect = 9e-83 Identities = 215/231 (93%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 333 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcc 392 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| ||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagc- 970 Query: 393 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 452 ||||||||| |||||||||||||||||||||||||||||| | |||||||||| |||||| Sbjct: 971 taaggccccaaaatgaccgctcagtgataaaggaggtgggag-tgcaaagacatccagga 1029 Query: 453 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 512 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1030 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1089 Query: 513 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc 563 |||||| ||||||||| ||| ||||||| |||||||||||||||||||||| Sbjct: 1090 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtc 1140
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 343 bits (173), Expect = 4e-91 Identities = 273/305 (89%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||| | |||||| |||||||| ||||||||||||||| ||||| Sbjct: 1041 cgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccgggtg 1100 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||||||||| ||||| |||||||||| |||| | ||| |||| |||||||||||| | Sbjct: 1101 atctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgactggt 1160 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| || ||||||||||| ||||||||||||||||||||||||||||| | |||||| Sbjct: 1161 gttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggagcta 1220 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaag 239 ||||||||||||||||||||||||||||||||| |||||| || | ||||||||||| Sbjct: 1221 gctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggtaaag 1280 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1281 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaga 1340 Query: 300 tatga 304 |||| Sbjct: 1341 catga 1345 Score = 285 bits (144), Expect = 8e-74 Identities = 206/224 (91%), Gaps = 2/224 (0%) Strand = Plus / Plus Query: 333 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcc 392 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| |||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagc- 1416 Query: 393 taaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagga 452 |||||||||||||||||||||||||| |||||||||| | | ||||||||||||||||| Sbjct: 1417 taaggcccctaaatgaccgctcagtggcaaaggaggtgagag-tgcaaagacagccagga 1475 Query: 453 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 512 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1476 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1535 Query: 513 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 556 |||||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1536 ttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 339 bits (171), Expect = 6e-90 Identities = 265/295 (89%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||| Sbjct: 4689 tagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgat 4748 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| ||||| Sbjct: 4749 ctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgt 4808 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||||||| Sbjct: 4809 tgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagc 4868 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 241 |||||||||||||||||||||||||||||||| || |||| || ||| |||||||||||| Sbjct: 4869 tggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagca 4928 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 4929 ctgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983 Score = 270 bits (136), Expect = 5e-69 Identities = 222/248 (89%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||| | Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagc-t 5063 Query: 394 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 453 |||||||||||||| ||||| |||| ||||||||||||| | |||||||||| ||| || Sbjct: 5064 aaggcccctaaatggccgctaagtggtaaaggaggtgggag-tgcaaagacaatcagtag 5122 Query: 454 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 513 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 5123 gtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctct 5182 Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 573 ||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||| Sbjct: 5183 tgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatc 5242 Query: 574 ggtagggg 581 |||||||| Sbjct: 5243 ggtagggg 5250
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 339 bits (171), Expect = 6e-90 Identities = 265/295 (89%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||| Sbjct: 656 tagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgat 715 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| ||||| Sbjct: 716 ctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgt 775 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||||||| Sbjct: 776 tgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagc 835 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 241 |||||||||||||||||||||||||||||||| || |||| || ||| |||||||||||| Sbjct: 836 tggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagca 895 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 896 ctgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 270 bits (136), Expect = 5e-69 Identities = 222/248 (89%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||| | Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagc-t 1030 Query: 394 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 453 |||||||||||||| ||||| |||| ||||||||||||| | |||||||||| ||| || Sbjct: 1031 aaggcccctaaatggccgctaagtggtaaaggaggtgggag-tgcaaagacaatcagtag 1089 Query: 454 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 513 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1090 gtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctct 1149 Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 573 ||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||| Sbjct: 1150 tgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatc 1209 Query: 574 ggtagggg 581 |||||||| Sbjct: 1210 ggtagggg 1217
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 339 bits (171), Expect = 6e-90 Identities = 265/295 (89%), Gaps = 1/295 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||| Sbjct: 656 tagcgaaagcaagtctttttagggctattgtcactgtctatggacccgaacccgggtgat 715 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| | |||||||| ||||||| ||||||| ||||| Sbjct: 716 ctaaccatggccaggatgaagcttgggtaaaactaagtggaggtccaaaccgaccgatgt 775 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| ||||||||| ||||||||| ||||||||||||||||||| | |||||||| Sbjct: 776 tgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggagctagc 835 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 241 |||||||||||||||||||||||||||||||| || |||| || ||| |||||||||||| Sbjct: 836 tggttctccccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagca 895 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 ||||||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct: 896 ctgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950 Score = 262 bits (132), Expect = 1e-66 Identities = 221/248 (89%), Gaps = 2/248 (0%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||| | Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagc-t 1030 Query: 394 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 453 |||||||||||||| ||||| |||| ||||| ||||||| | |||||||||| ||| || Sbjct: 1031 aaggcccctaaatggccgctaagtggtaaagaaggtgggag-tgcaaagacaatcagtag 1089 Query: 454 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 513 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1090 gtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctct 1149 Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 573 ||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||| Sbjct: 1150 tgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatc 1209 Query: 574 ggtagggg 581 |||||||| Sbjct: 1210 ggtagggg 1217
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 333 bits (168), Expect = 4e-88 Identities = 270/301 (89%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 61 ||||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| Sbjct: 642 agcgaaagcgagtctgaatagggcacttttgtcactttttatggacccgaacccgggtga 701 Query: 62 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 121 |||| |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 702 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 761 Query: 122 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 181 ||||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 762 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctag 821 Query: 182 ctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggggtaa 237 |||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| Sbjct: 822 ctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggggtaa 881 Query: 238 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 882 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatacta 941 Query: 298 g 298 | Sbjct: 942 g 942 Score = 240 bits (121), Expect = 4e-60 Identities = 201/225 (89%), Gaps = 2/225 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccag- 1018 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||||| ||||| ||||||||||||||| | | ||| | ||| ||||| Sbjct: 1019 ctaaggcccctaaatggccgctaagtgataaaggaggt-gagaatgctgaaacaaccagg 1077 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| Sbjct: 1078 aggtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgtt 1137 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 556 ||||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1138 cttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 331 bits (167), Expect = 1e-87 Identities = 196/203 (96%), Gaps = 2/203 (0%) Strand = Plus / Plus Query: 296 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 355 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 356 ttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctca 415 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccag-ctaaggcccctaaatgaccgctca 19152948 Query: 416 gtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 475 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 19152949 gtgataaaggaggt-gggggtgcaaagatagccaggaggtttgcctagaagcagccaccc 19153007 Query: 476 tttaaagagtgcgtaatagctca 498 |||||||||||||| ||| |||| Sbjct: 19153008 tttaaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 331 bits (167), Expect = 1e-87 Identities = 196/203 (96%), Gaps = 2/203 (0%) Strand = Plus / Plus Query: 296 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 355 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 356 ttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctca 415 ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccag-ctaaggcccctaaatgaccgctca 76343 Query: 416 gtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccc 475 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 76344 gtgataaaggaggt-gggggtgcaaagatagccaggaggtttgcctagaagcagccaccc 76402 Query: 476 tttaaagagtgcgtaatagctca 498 |||||||||||||| ||| |||| Sbjct: 76403 tttaaagagtgcgttatatctca 76425
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 329 bits (166), Expect = 6e-87 Identities = 269/300 (89%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 61 ||||||||| |||||||||||||||||| |||||| ||||||||||||||| |||||| Sbjct: 706 agcgaaagcaagtcttaatagggcgattttgtcactttttatggacccgaacccgggtga 765 Query: 62 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 121 |||| |||||||||||||||||||||| | |||| ||| || |||||||||||| |||| Sbjct: 766 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaagtccgaaccgaccgatg 825 Query: 122 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 181 ||||| |||| |||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 826 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 885 Query: 182 ctggttctccccgaaatgcgttgaggcgcagcagttga--ctg-gacatctaggggtaaa 238 |||||||||||||||||||||||||||||||| ||||| || | |||||||||||| Sbjct: 886 ctggttctccccgaaatgcgttgaggcgcagcggttgatgttgagctgtctaggggtaaa 945 Query: 239 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 946 gcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactag 1005 Score = 196 bits (99), Expect = 6e-47 Identities = 197/227 (86%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||| Sbjct: 1083 -taaggcccctgaatggccgctaagtggcaaaggaggtgagaa-tgctgaaacaaccagg 1140 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1141 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgtt 1200 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 558 ||||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1201 cttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 327 bits (165), Expect = 2e-86 Identities = 206/217 (94%), Gaps = 7/217 (3%) Strand = Plus / Plus Query: 352 aagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccg 411 |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagc-taaggcccctaaatgaccg 168010 Query: 412 ctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcc 471 ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 168011 ctcagtgataaaggaggtggggg-tgcaaagac-----ggaggtttgcctaaaagcagcc 168064 Query: 472 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168065 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 168124 Query: 532 ggctaagcgatctgccgaagctgtgggatgtcaaaat 568 |||||||||||||||| |||||||||||||||||||| Sbjct: 168125 ggctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 327 bits (165), Expect = 2e-86 Identities = 206/217 (94%), Gaps = 7/217 (3%) Strand = Plus / Plus Query: 352 aagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccg 411 |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagc-taaggcccctaaatgaccg 2414 Query: 412 ctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcc 471 ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||| Sbjct: 2415 ctcagtgataaaggaggtggggg-tgcaaagac-----ggaggtttgcctaaaagcagcc 2468 Query: 472 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2469 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 2528 Query: 532 ggctaagcgatctgccgaagctgtgggatgtcaaaat 568 |||||||||||||||| |||||||||||||||||||| Sbjct: 2529 ggctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 323 bits (163), Expect = 4e-85 Identities = 269/303 (88%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||| || | ||||| |||||||| ||||||||||||||| ||||||| Sbjct: 602 tagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaacccgggtgat 661 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||||||||| ||||||||||| |||| |||||| || ||||||||||||||||| ||| Sbjct: 662 ctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaaccgactggtgt 721 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| || || |||||||| ||||| ||||||||||||||||||||||| | |||||||| Sbjct: 722 tgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaactcggagctagc 781 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagca 241 ||||||||||||||||||||||||||||||| ||||||| ||| || ||||||||||||| Sbjct: 782 tggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggtaaagca 841 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 301 |||||||||||||||||| | | ||||||||||| || ||||||||||||||||| ||| Sbjct: 842 ctgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatactaaata 901 Query: 302 tga 304 ||| Sbjct: 902 tga 904 Score = 293 bits (148), Expect = 3e-76 Identities = 213/232 (91%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 ||||||||||||||||||||| |||||||||||| ||| | | ||||||||||||||| Sbjct: 975 t-taaggcccctaaatgaccgctaagtgataaaggatgtgagag-tgcaaagacagccag 1032 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct: 1033 gaggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgc 1092 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 ||||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| Sbjct: 1093 tcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgt 1144
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 315 bits (159), Expect = 9e-83 Identities = 268/303 (88%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||| |||||| |||||| | ||||| ||||| ||||||||||| |||||||| Sbjct: 631 tagcgaaagcaagtcttcatagggaaaatgtcattgcttgtggacccgaacttgggtgat 690 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| |||||||||||||| | |||| | |||||||| | |||| |||||||||||||| Sbjct: 691 ctaaccatgaccaggatgcaatttggttaaaactaagtgggggtctgaaccgactgatgt 750 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 751 tgaagaatcagcggatgagttgtggttaggggtgaaatgccaatcgaacccaaagctagc 810 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 |||||| ||||||||||| || ||||||||||||| || || ||||||||||||||||| Sbjct: 811 tggttcgccccgaaatgcatttaggcgcagcagtt-accgggcatctaggggtaaagcat 869 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 302 ||||| |||||||| || |||||||||||||| |||||| ||| |||||||||||||| Sbjct: 870 tgttttggtgcgggtcacgagagcggtaccaaattgaggcagactatgaatactagatat 929 Query: 303 gac 305 ||| Sbjct: 930 gac 932 Score = 174 bits (88), Expect = 2e-40 Identities = 170/195 (87%), Gaps = 3/195 (1%) Strand = Plus / Plus Query: 308 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 367 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 368 agggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgataaaggag 427 |||| |||| || |||||| ||| |||| |||||||||||||||| ||| ||||||||| Sbjct: 1004 aggggaacattccagatcactagc-taagccccctaaatgaccgctaagttataaaggag 1062 Query: 428 gtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 487 || ||| |||| ||||| |||||||||||||||||||| ||||||||||||||| |||| Sbjct: 1063 gtaggg--tgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgc 1120 Query: 488 gtaatagctcactga 502 |||||||| ||||| Sbjct: 1121 ataatagctaactga 1135
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 102 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 161 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 162 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 221 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 222 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 281 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 282 caaactctgaatactagatat 302 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 307 bits (155), Expect = 2e-80 Identities = 265/299 (88%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 790 agcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaacccgggtgatc 849 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || |||||||||||||||||||| | | |||| || || |||||||||||| |||||| Sbjct: 850 taaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgtt 909 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 910 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 969 Query: 184 ggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagca 241 |||||||||||||||||||||||||||||| ||| || ||| | ||||||||||||||| Sbjct: 970 ggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagca 1029 Query: 242 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 300 |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1030 ctgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 240 bits (121), Expect = 4e-60 Identities = 204/229 (89%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||| Sbjct: 1163 -taaggcccctcaatggccgctaagtggtaaaggaggtgagaa-tgcagaaacaaccagg 1220 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| Sbjct: 1221 aggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgtt 1280 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1281 cttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 29 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 88 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 89 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 148 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 149 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 208 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 209 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 265 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 266 cggtaccaaatcgaggcaaactctgaatactaga 299 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 220 bits (111), Expect = 4e-54 Identities = 200/227 (88%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| Sbjct: 1150 -taaggccccaaaatgaccgctaagtggcaaaggatgtgagaa-tgctgaaacaaccaga 1207 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 1208 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgtt 1267 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 558 ||||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1268 cttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 305 bits (154), Expect = 9e-80 Identities = 192/202 (95%), Gaps = 2/202 (0%) Strand = Plus / Minus Query: 359 atcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtg 418 |||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagc-taaggcccctaaatgatcgctcagtg 115416 Query: 419 ataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttt 478 ||||||||||| || | |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 115415 ataaaggaggtaggag-tgcagagacagccaggaggtttgcctagaagcagccacccttg 115357 Query: 479 aaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaag 538 |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 115356 aaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaag 115297 Query: 539 cgatctgccgaagctgtgggat 560 |||||||||||||||||||||| Sbjct: 115296 cgatctgccgaagctgtgggat 115275
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 305 bits (154), Expect = 9e-80 Identities = 161/162 (99%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 420 taaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccacccttta 479 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtggggg-tgcaaagacagccaggaggtttgcctagaagcagccacccttta 59 Query: 480 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagc 119 Query: 540 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 161
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 45 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 104 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 105 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 165 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 223 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 224 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 282 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 283 aaactctgaatactagatatgac 305 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 436 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 495 |||||| ||| |||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 6746 tgcaaatacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagc 6805 Query: 496 tcactg 501 |||||| Sbjct: 6806 tcactg 6811 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| || Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccag-ct 6704 Query: 394 aaggcccctaaatg 407 |||||||| ||||| Sbjct: 6705 aaggccccaaaatg 6718 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgat 30 |||||| ||||||||||| ||||||||||| Sbjct: 6307 cgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 45 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 104 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 105 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 165 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 223 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 224 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 282 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 283 aaactctgaatactagatatgac 305 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 436 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 495 |||||| ||| |||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 3809 tgcaaatacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagc 3868 Query: 496 tcactg 501 |||||| Sbjct: 3869 tcactg 3874 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| || Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccag-ct 3767 Query: 394 aaggcccctaaatg 407 |||||||| ||||| Sbjct: 3768 aaggccccaaaatg 3781 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgat 30 |||||| ||||||||||| ||||||||||| Sbjct: 3370 cgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 5e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 45 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 104 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 105 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 165 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 223 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 224 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 282 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 283 aaactctgaatactagatatgac 305 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 91.7 bits (46), Expect = 2e-15 Identities = 61/66 (92%) Strand = Plus / Plus Query: 436 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 495 |||||| ||| |||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 1097 tgcaaatacaaccaggaggttggcttagaagcagccatcctttaaagagtgcgtaatagc 1156 Query: 496 tcactg 501 |||||| Sbjct: 1157 tcactg 1162 Score = 67.9 bits (34), Expect = 3e-08 Identities = 65/74 (87%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| || Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccag-ct 1055 Query: 394 aaggcccctaaatg 407 |||||||| ||||| Sbjct: 1056 aaggccccaaaatg 1069 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgat 30 |||||| ||||||||||| ||||||||||| Sbjct: 658 cgtagcaaaagcgagtctgaatagggcgat 687
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 32 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 91 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 92 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 151 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 152 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 211 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 212 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 268 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 269 taccaaatcgaggcaaactctgaatactaga 299 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 264 bits (133), Expect = 3e-67 Identities = 207/229 (90%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||| Sbjct: 1026 -taaggcccctaaatgaccgctaagtggtaaaggaggtgagaa-tgctgaaacaaccagg 1083 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 1084 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgtt 1143 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1144 cttgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctgggtga 61 |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| |||||| Sbjct: 2456 tagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacccgggtga 2515 Query: 62 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 121 |||| ||||| ||||| |||||||| | | ||||||| |||| ||||||||| |||| Sbjct: 2516 tctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccgatcgatg 2575 Query: 122 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 181 ||||| |||| ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2576 ttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 2635 Query: 182 ctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggtaaagc 240 |||||||||||||||||||||||||||||||| ||||| | || |||||||||||| Sbjct: 2636 ctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggggtaaagc 2695 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 |||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct: 2696 actgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaatacta 2752 Score = 157 bits (79), Expect = 5e-35 Identities = 186/219 (84%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || ||||| | ||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatc-taaggccccta 2836 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | ||| |||| ||||||||||| | ||| ||||| ||||||||||||| ||| Sbjct: 2837 aataatagctaagtgggaaaggaggtggaag-tgcttagacaaccaggaggtttgcttag 2895 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||| | |||||||||||||||||||||||||||| || ||||| ||||| ||| Sbjct: 2896 aagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgcttctgcgccgaaa 2955 Query: 524 atgaacggggctaagcgatctgccgaagctgtgggatgt 562 ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 2956 atgaatgggactaagctatttgccgaagctgtgggatgt 2994
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtga 61 |||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||| Sbjct: 114792 tagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgggtga 114733 Query: 62 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 121 |||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | ||| Sbjct: 114732 tctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgattaatg 114673 Query: 122 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 181 ||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 114672 ttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 114613 Query: 182 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagc 240 |||||||||||||||||| ||||||||||||| ||||| | | | |||||||||||| Sbjct: 114612 ctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggtaaagc 114553 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 114552 actgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 114496 Score = 287 bits (145), Expect = 2e-74 Identities = 261/297 (87%), Gaps = 2/297 (0%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtga 61 |||||||||||||| | |||| ||| |||||||| |||| |||||||||| |||||| Sbjct: 2725 tagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccgggtga 2784 Query: 62 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 121 |||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || | ||| Sbjct: 2785 tctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgattaatg 2844 Query: 122 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 181 ||||| ||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| Sbjct: 2845 ttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccggagctag 2904 Query: 182 ctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagc 240 |||||||||||||||||| ||||||||||||| ||||| | | | |||||||||||| Sbjct: 2905 ctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggtaaagc 2964 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 2965 actgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 3021 Score = 174 bits (88), Expect = 2e-40 Identities = 198/232 (85%), Gaps = 2/232 (0%) Strand = Plus / Minus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 |||||||||||||| ||| |||| |||||||||||| | ||| ||||| |||| Sbjct: 114423 t-taaggcccctaaatagtagctaagtggcaaaggaggtgggag-tgcttagacaaccag 114366 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 114365 gaggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 114306 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114305 tcctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 174 bits (88), Expect = 2e-40 Identities = 198/232 (85%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 |||||||||||||| ||| |||| |||||||||||| | ||| ||||| |||| Sbjct: 3094 t-taaggcccctaaatagtagctaagtggcaaaggaggtgggag-tgcttagacaaccag 3151 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 3152 gaggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 3211 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3212 tcctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 285 bits (144), Expect = 8e-74 Identities = 159/164 (96%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 20 cgtagcgaaagcgagtcttcatagggcaattgtcactgcttatggacccgaacctgggtg 79 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| Sbjct: 80 atctatccatgaccaggatgaagcttgggtgaaactaagtggaggtccgaaccgactgat 139 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140 gttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 62 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 183 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 239 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 240 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 153 bits (77), Expect = 8e-34 Identities = 193/229 (84%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| Sbjct: 995 -taaggcccctaaataatttctaagtgggaaaggaggtgagaa-tgctgagacaaccaga 1052 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1053 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtt 1112 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 |||||| ||| ||| |||| ||||| || ||||||||||||||||| Sbjct: 1113 tttgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggat 1161
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 |||| ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 262 gaaaccgagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaa 321 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 382 aaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggt 441 Query: 187 tctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgt 245 ||||||||||||| ||| ||||||||| || | |||||| |||||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgt 501 Query: 246 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 502 ttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 180 bits (91), Expect = 3e-42 Identities = 196/227 (86%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||| Sbjct: 626 c-taaggtcccaaaatggatgctaagtgataaaggaggtgggat-tgcagagacaaccag 683 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| Sbjct: 684 gaggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcga 743 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 | | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 744 tcct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 45 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 104 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 105 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 165 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 223 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 224 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 283 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 284 aactctgaatactagata 301 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 210 bits (106), Expect = 4e-51 Identities = 201/230 (87%), Gaps = 2/230 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||| Sbjct: 1004 c-taaggccccaaaatgatcgttaagtgacaaaggaggtgagaa-tgcagaaacaaccag 1061 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 1062 gaggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgt 1121 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1122 tcttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 45 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 104 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 105 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 165 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 223 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 224 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 283 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 284 aactctgaatactagata 301 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 210 bits (106), Expect = 4e-51 Identities = 201/230 (87%), Gaps = 2/230 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||| Sbjct: 25813 c-taaggccccaaaatgatcgttaagtgacaaaggaggtgagaa-tgcagaaacaaccag 25870 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| Sbjct: 25871 gaggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgt 25930 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25931 tcttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 281 bits (142), Expect = 1e-72 Identities = 256/294 (87%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| | |||||| | |||||| |||| |||||||||| || |||| Sbjct: 2197 tagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacccggatgat 2256 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| |||| |||||||||||||| | | | ||| || ||||||||||||||||||||| Sbjct: 2257 ctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccgactgatgt 2316 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| ||||||||||||||||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 2317 tgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccggagctagc 2376 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcac 242 ||||||||||||||||||||||||||||||| ||| | | | | |||||||||||| Sbjct: 2377 tggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttgggggtaaagcac 2436 Query: 243 tgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 ||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2437 tgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 2490 Score = 208 bits (105), Expect = 1e-50 Identities = 200/229 (87%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||| Sbjct: 2565 -taaggcccctaaataattgctaagtgataaaggaggtgggaa-tgcatagacaaccagg 2622 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| |||||||||| |||||||||||||||||||||||||||||| || || | Sbjct: 2623 aggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgat 2682 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 | ||||| ||| ||||||||| |||||| || ||||||||||||||||| Sbjct: 2683 cctgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat 2731
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 187 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 245 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 246 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 187 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 245 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 246 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 188 bits (95), Expect = 1e-44 Identities = 199/231 (86%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||| Sbjct: 189932 -taaggcccctaaataattgctaagtggcaaaggaggtgggaa-tgcatagacaaccagg 189989 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| |||||||||| |||||||||||||||||||||||||||||| || || | Sbjct: 189990 aggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgat 190049 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | ||||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 190050 cctgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 190100 Score = 188 bits (95), Expect = 1e-44 Identities = 199/231 (86%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||| Sbjct: 151359 -taaggcccctaaataattgctaagtggcaaaggaggtgggaa-tgcatagacaaccagg 151416 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| |||||||||| |||||||||||||||||||||||||||||| || || | Sbjct: 151417 aggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgat 151476 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 | ||||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 151477 cctgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 151527
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 278 bits (140), Expect = 2e-71 Identities = 263/302 (87%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||| |||||||||| |||||| |||| |||||||||| ||||| Sbjct: 639 cgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgggtg 697 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| ||| Sbjct: 698 atctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgaccgat 757 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||||| Sbjct: 758 gttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagcta 817 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaa 237 ||||||||||||||||||||||||||||||||| || ||| || ||||||||||| Sbjct: 818 gctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggtaa 877 Query: 238 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 ||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||||| Sbjct: 878 agctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatacta 937 Query: 298 ga 299 || Sbjct: 938 ga 939 Score = 186 bits (94), Expect = 5e-44 Identities = 192/222 (86%), Gaps = 2/222 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||| Sbjct: 1017 -taaggcccctaaatggccgctaagtggcaaaggaggtgagaa-tgctgaaacaaccagg 1074 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 1075 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgtt 1134 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagct 553 ||||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1135 cttgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 278 bits (140), Expect = 2e-71 Identities = 263/302 (87%), Gaps = 4/302 (1%) Strand = Plus / Plus Query: 1 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 60 |||||||||||||||||| |||||||||| |||||| |||| |||||||||| ||||| Sbjct: 2521 cgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgggtg 2579 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| ||| Sbjct: 2580 atctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgaccgat 2639 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | |||||| Sbjct: 2640 gttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggagcta 2699 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaa 237 ||||||||||||||||||||||||||||||||| || ||| || ||||||||||| Sbjct: 2700 gctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggtaa 2759 Query: 238 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 ||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||||| Sbjct: 2760 agctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatacta 2819 Query: 298 ga 299 || Sbjct: 2820 ga 2821 Score = 186 bits (94), Expect = 5e-44 Identities = 192/222 (86%), Gaps = 2/222 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||| Sbjct: 2899 -taaggcccctaaatggccgctaagtggcaaaggaggtgagaa-tgctgaaacaaccagg 2956 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 2957 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgtt 3016 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagct 553 ||||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3017 cttgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 187 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 244 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 7e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 187 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 244 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 297 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 161 bits (81), Expect = 3e-36 Identities = 194/229 (84%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| | Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc-t 189009 Query: 394 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 453 |||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189010 aaggccccaaaataattactaagtggcaaaggaggtgggaa-tgcatagacaaccaggag 189068 Query: 454 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 513 |||||| |||||||||| | |||||||||||||||||||||||||||| || || | | Sbjct: 189069 gtttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcc 189128 Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 189129 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 189177 Score = 161 bits (81), Expect = 3e-36 Identities = 194/229 (84%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcct 393 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| | Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc-t 150566 Query: 394 aaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggag 453 |||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||| Sbjct: 150567 aaggccccaaaataattactaagtggcaaaggaggtgggaa-tgcatagacaaccaggag 150625 Query: 454 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 513 |||||| |||||||||| | |||||||||||||||||||||||||||| || || | | Sbjct: 150626 gtttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcc 150685 Query: 514 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 562 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 150686 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt 150734
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 40 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 99 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 100 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 159 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 160 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 219 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 220 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 277 cgaggcaaactctgaatact 296 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 178 bits (90), Expect = 1e-41 Identities = 152/170 (89%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcag- 1023 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| || ||| |||| ||||||||| | ||| ||||| ||||| Sbjct: 1024 ctaaggcccctaaataacggctaagtgggaaaggaggt-gaaaatgctcagacaaccagg 1082 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1083 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 40 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 99 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 100 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 159 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 160 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 219 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 220 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 276 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 277 cgaggcaaactctgaatact 296 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 178 bits (90), Expect = 1e-41 Identities = 152/170 (89%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcag- 2761 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| || ||| |||| ||||||||| | ||| ||||| ||||| Sbjct: 2762 ctaaggcccctaaataacggctaagtgggaaaggaggt-gaaaatgctcagacaaccagg 2820 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2821 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 268 bits (135), Expect = 2e-68 Identities = 135/135 (100%) Strand = Plus / Minus Query: 447 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 507 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 567 atgcatcggtagggg 581 ||||||||||||||| Sbjct: 20750 atgcatcggtagggg 20736
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||||| |||| || |||| |||||||||| ||||||| Sbjct: 5967 tagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgat 5908 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 5907 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 5848 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 5847 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 5788 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 5787 tggttctccccgaaatacgttgaggcg 5761 Score = 141 bits (71), Expect = 3e-30 Identities = 166/195 (85%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||||| ||||||||||||| || | ||||| ||||| ||| | Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagc-taaggtcccca 5587 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 5586 aatcaacactaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 5528 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 5527 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 5468 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 5467 atgaacggggctaag 5453 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||||| |||| || |||| |||||||||| ||||||| Sbjct: 211805 tagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgggtgat 211864 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 211865 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 211924 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 211925 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 211984 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 211985 tggttctccccgaaatacgttgaggcg 212011 Score = 141 bits (71), Expect = 3e-30 Identities = 166/195 (85%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||||| ||||||||||||| || | ||||| ||||| ||| | Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagc-taaggtcccca 212185 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 212186 aatcaacactaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 212244 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 212245 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 212304 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 212305 atgaacggggctaag 212319 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 268 bits (135), Expect = 2e-68 Identities = 189/207 (91%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 611 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 268 bits (135), Expect = 2e-68 Identities = 260/300 (86%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctgggtga 61 ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| |||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccgggtga 675 Query: 62 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 121 |||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 676 tctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 735 Query: 122 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 181 ||||| |||| ||||||||| |||||||||||||||||||||| |||||| | ||||||| Sbjct: 736 ttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctag 795 Query: 182 ctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaa 238 |||||||||||||||||||||||||||||||| ||| ||| || |||||||||||| Sbjct: 796 ctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaa 855 Query: 239 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 |||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 856 gcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 192 bits (97), Expect = 9e-46 Identities = 198/229 (86%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||| Sbjct: 993 -taaggccccagaatggccgctaagtggtaaaggaggtgagaa-tgcagaaacagccagg 1050 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 1051 aggtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgtt 1110 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1111 cttgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 7e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 187 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 243 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 244 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 202 bits (102), Expect = 9e-49 Identities = 201/230 (87%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| ||| |||| | |||| |||||||||||||||| | | |||| ||||| | || Sbjct: 626 c-taaggtccccaaatcatcgctaagtgataaaggaggtgagag-tgcacagacaactag 683 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 684 gaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgc 743 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 | | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 744 tcct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 262 bits (132), Expect = 1e-66 Identities = 161/168 (95%), Gaps = 2/168 (1%) Strand = Plus / Plus Query: 414 cagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagccac 473 |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtagggg-tgcagagacagccaggaggtttgcctagaagcagccac 59 Query: 474 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 533 |||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct: 60 ccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacgggg 118 Query: 534 ctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggg 581 ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 119 ctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagggg 166
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 137128 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 137187 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 137188 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 137247 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 137248 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 137307 Query: 184 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 240 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 137308 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 137367 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137368 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 48416 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 48357 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 48356 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 48297 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 48296 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 48237 Query: 184 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 240 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 48236 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 48177 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 298 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48176 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 200 bits (101), Expect = 4e-48 Identities = 199/229 (86%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| Sbjct: 137502 -taaggcccctaaatggcagctaagtggcaaaggatgtgagaa-tgcagagacaaccaga 137559 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| Sbjct: 137560 aggtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgtt 137619 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137620 cttgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 200 bits (101), Expect = 4e-48 Identities = 199/229 (86%), Gaps = 2/229 (0%) Strand = Plus / Minus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| Sbjct: 48042 -taaggcccctaaatggcagctaagtggcaaaggatgtgagaa-tgcagagacaaccaga 47985 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| Sbjct: 47984 aggtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgtt 47925 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 ||||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47924 cttgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 260 bits (131), Expect = 5e-66 Identities = 258/299 (86%), Gaps = 6/299 (2%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||| Sbjct: 635 agcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatc 694 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||| ||||||||| |||||| | || |||||||||||| || ||| Sbjct: 695 taaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgtt 754 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||||| || |||||||||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 755 gaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagct 814 Query: 184 ggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaa 237 |||||||||||||||||||||||||||||| || || ||| || ||||||||||| Sbjct: 815 ggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaa 874 Query: 238 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933 Score = 242 bits (122), Expect = 1e-60 Identities = 208/234 (88%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 328 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 387 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 388 cagcctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagc 447 |||| ||||||||| |||| |||||||||||||||||| ||| | | ||| ||||| | Sbjct: 1008 cagc-taaggccccagaatggccgctcagtgataaaggatgtgagag-tgcccagacaac 1065 Query: 448 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 507 |||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaag 1125 Query: 508 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatg 561 ||| ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| Sbjct: 1126 cgctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatg 1179
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 260 bits (131), Expect = 5e-66 Identities = 188/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||||||||||||| |||||| || |||| |||||||||| |||||| Sbjct: 356108 tagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgat 356167 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 356168 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgatgt 356227 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||||||||||||| |||||||||||||||||||||| ||||||| |||||||| Sbjct: 356228 tgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagc 356287 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 356288 tggttctccccgaaatacgttgaggcg 356314 Score = 109 bits (55), Expect = 1e-20 Identities = 162/195 (83%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| || |||| ||||||||||||| || | ||||| ||||| ||| | Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagc-taaggtcccaa 356488 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | || |||||||||||||||||| ||| ||||| ||||||||||||| ||| Sbjct: 356489 aatcagtactaagtgataaaggaggtgggat-tgcttagacaaccaggaggtttgcttag 356547 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 356548 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 356607 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 356608 atgaacggggctaag 356622 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 187 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 243 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 244 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 186 bits (94), Expect = 5e-44 Identities = 195/226 (86%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| ||| |||| | |||| | |||||||||||||||| | |||| ||||| | || Sbjct: 626 c-taaggtccccaaatcagcgctaattgataaaggaggtgggag-tgcatagacaactag 683 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 684 gaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgc 743 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 556 | ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 744 tcctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 258 bits (130), Expect = 2e-65 Identities = 266/308 (86%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgg 57 ||||||||||||||||||||||||||||| |||||| | |||||||||||||| || Sbjct: 771 tagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaacccgg 830 Query: 58 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 117 |||||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| Sbjct: 831 gtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgacc 890 Query: 118 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 177 ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||| Sbjct: 891 gatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggag 950 Query: 178 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 234 |||||||| ||||||||||||||||||||||||||| | ||||| | |||||| || Sbjct: 951 ctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagagg 1009 Query: 235 taaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 293 |||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||| Sbjct: 1010 taaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaat 1069 Query: 294 actagata 301 |||||||| Sbjct: 1070 actagata 1077 Score = 60.0 bits (30), Expect = 9e-06 Identities = 40/42 (95%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 366 agagggaaacagcccggatcaccagcctaaggcccctaaatg 407 ||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccag-ctaaggcccctaaatg 1166 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 461 tagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 258 bits (130), Expect = 2e-65 Identities = 266/308 (86%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgg 57 ||||||||||||||||||||||||||||| |||||| | |||||||||||||| || Sbjct: 771 tagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaacccgg 830 Query: 58 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 117 |||||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| Sbjct: 831 gtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgacc 890 Query: 118 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 177 ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||| Sbjct: 891 gatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggag 950 Query: 178 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 234 |||||||| ||||||||||||||||||||||||||| | ||||| | |||||| || Sbjct: 951 ctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagagg 1009 Query: 235 taaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 293 |||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||| Sbjct: 1010 taaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaat 1069 Query: 294 actagata 301 |||||||| Sbjct: 1070 actagata 1077 Score = 60.0 bits (30), Expect = 9e-06 Identities = 40/42 (95%), Gaps = 1/42 (2%) Strand = Plus / Plus Query: 366 agagggaaacagcccggatcaccagcctaaggcccctaaatg 407 ||||||||||||||| ||||||||| |||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccag-ctaaggcccctaaatg 1166
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 256 bits (129), Expect = 7e-65 Identities = 267/307 (86%), Gaps = 7/307 (2%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtg 60 |||||||||||||||| ||||||||| | |||||| |||||||||||||||| ||||| Sbjct: 661 tagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaacccgggtg 720 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 ||||| |||||||||||||||||||||| | || | ||| ||||||||||||||| ||| Sbjct: 721 atctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccgaccgat 780 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | |||||| Sbjct: 781 gttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcggagcta 840 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 237 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 841 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 899 Query: 238 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 900 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 959 Query: 297 agatatg 303 ||||||| Sbjct: 960 agatatg 966 Score = 147 bits (74), Expect = 5e-32 Identities = 190/226 (84%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||| Sbjct: 1038 -taaggcccctaaatggtcactaagtggaaaaggatgtgagaa-tgctgaaacaaccagg 1095 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||| Sbjct: 1096 aggtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactggtaaagcgtt 1155 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 ||||||| || ||| |||| ||||| || ||||||||||||||| Sbjct: 1156 cttgcgccgataatggccgggactaagtgacctgccgaagctgtgg 1201
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2138151 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 2138092 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 2138091 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 2138032 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 2138031 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 2137972 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 2137971 tggttctccccgaaatacgttgaggcg 2137945 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 476709 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 476768 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 476769 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 476828 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 476829 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 476888 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 476889 tggttctccccgaaatacgttgaggcg 476915 Score = 157 bits (79), Expect = 5e-35 Identities = 168/195 (86%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||||||||||||||||||| || | ||||| ||||| ||| | Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagc-taaggtcccca 2137771 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 2137770 aatcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctag 2137712 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 2137711 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 2137652 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 2137651 atgaacggggctaag 2137637 Score = 157 bits (79), Expect = 5e-35 Identities = 168/195 (86%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||||||||||||||||||| || | ||||| ||||| ||| | Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagc-taaggtcccca 477089 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 477090 aatcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctag 477148 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 477149 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 477208 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 477209 atgaacggggctaag 477223 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 339402 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 339343 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 339342 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 339283 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 339282 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 339223 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 339222 tggttctccccgaaatacgttgaggcg 339196 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 132462 tagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgggtgat 132403 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 132402 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 132343 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 132342 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 132283 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 132282 tggttctccccgaaatacgttgaggcg 132256 Score = 133 bits (67), Expect = 7e-28 Identities = 165/195 (84%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagc-taaggtcccca 339022 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| | || ||||| ||||||||||||||||| Sbjct: 339021 aatcaacactaagtgataaaggaggtgggat-tccatagacaaccaggaggtttgcctag 338963 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| Sbjct: 338962 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaa 338903 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 338902 atgaacggggctaag 338888 Score = 133 bits (67), Expect = 7e-28 Identities = 165/195 (84%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagc-taaggtcccca 132082 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| | || ||||| ||||||||||||||||| Sbjct: 132081 aatcaacactaagtgataaaggaggtgggat-tccatagacaaccaggaggtttgcctag 132023 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||| | | ||||| ||| Sbjct: 132022 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagggatcctgcgccgaaa 131963 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 131962 atgaacggggctaag 131948 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 252 bits (127), Expect = 1e-63 Identities = 187/207 (90%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 492 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 551 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| || Sbjct: 552 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgacgt 611 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | |||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 612 tgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 671 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 672 tggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 1e-63 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 32 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 91 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 92 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 151 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 152 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 211 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 212 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 270 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 271 ccaaatcgaggcaaactctgaatacta 297 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 131 bits (66), Expect = 3e-27 Identities = 146/170 (85%), Gaps = 2/170 (1%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||| Sbjct: 2769 -taaggcccctaaatatttactaagtggcaaaggaagtgggaa-tgcatagacaaccagg 2826 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 501 |||||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2827 aggtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2876
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 184 ggttctccccgaaatgcgttgaggcgcagc 213 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 196 bits (99), Expect = 6e-47 Identities = 183/207 (88%), Gaps = 3/207 (1%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||| ||| |||| ||| || ||||| |||||||||||| | |||| ||||| ||||| Sbjct: 628 -taaggtccccaaataaccactaagtgagaaaggaggtgggag-tgcacagacaaccagg 685 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 ||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 686 aggtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgct 745 Query: 512 cttgcgctgaagatgaacggggctaag 538 | | ||| ||| ||||||||||||||| Sbjct: 746 cct-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 291 aatac 295 ||||| Sbjct: 548 aatac 552
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 4e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 184 ggttctccccgaaatgcgttgaggcgcagc 213 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 220 bits (111), Expect = 4e-54 Identities = 201/227 (88%), Gaps = 3/227 (1%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| ||| ||||||| ||| |||||||||||||||| | | |||| |||| |||| Sbjct: 627 c-taaggtccccaaatgactgctaagtgataaaggaggtgagag-tgcactgacaaccag 684 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 685 gaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgc 744 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 ||| ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 745 tctt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 291 aatac 295 ||||| Sbjct: 548 aatac 552
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 4e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 102 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 161 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 162 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 221 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 222 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 278 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 279 aggcaaactctgaatactag 298 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 153 bits (77), Expect = 8e-34 Identities = 198/233 (84%), Gaps = 4/233 (1%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 390 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | |||||||||| ||||| || ||||| ||||| ||| | | |||| ||||| |||| Sbjct: 1013 c-taaggcccctcaatgattcctaagtgacgaaggatgtgagag-tgcagagacaaccag 1070 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1071 aaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgc 1130 Query: 511 ccttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgt 562 || |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| Sbjct: 1131 tctggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt 1183 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 31 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 86 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 62 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 240 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 241 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 300 tatg 303 |||| Sbjct: 958 tatg 961 Score = 137 bits (69), Expect = 5e-29 Identities = 188/225 (83%), Gaps = 2/225 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag- 1031 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||||| | || |||| ||||||| || | | ||| | ||| ||||| Sbjct: 1032 ctaaggcccctaaatggtcactaagtggtaaaggatgt-gagaatgctgaaacaaccagg 1090 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 | ||| || |||||||||| ||| || ||||||||||||||||||||||| | |||| Sbjct: 1091 aagttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactggtaaagcgtt 1150 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 556 ||||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1151 cttgcgccgataatggccgggactaagtgacctgccgaagctgtg 1195
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 62 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 183 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 240 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 241 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 299 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 300 tatg 303 |||| Sbjct: 958 tatg 961 Score = 137 bits (69), Expect = 5e-29 Identities = 188/225 (83%), Gaps = 2/225 (0%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccag- 1031 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 |||||||||||||||| | || |||| ||||||| || | | ||| | ||| ||||| Sbjct: 1032 ctaaggcccctaaatggtcactaagtggtaaaggatgt-gagaatgctgaaacaaccagg 1090 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 | ||| || |||||||||| ||| || ||||||||||||||||||||||| | |||| Sbjct: 1091 aagttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactggtaaagcgtt 1150 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 556 ||||||| || ||| |||| ||||| || |||||||||||||| Sbjct: 1151 cttgcgccgataatggccgggactaagtgacctgccgaagctgtg 1195
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 203/227 (89%), Gaps = 2/227 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| ||| ||||| ||||||||||| ||||||||||| | |||| ||||| |||| Sbjct: 629 c-taaggtccccaaatggtcgctcagtgattaaggaggtgggag-tgcacagacaaccag 686 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| Sbjct: 687 gaggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgc 746 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 | ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 747 tcctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 184 ggttctccccgaaatgcgttgaggcgcagcagttg 218 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 291 aatac 295 ||||| Sbjct: 550 aatac 554
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 3e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 3e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 244 bits (123), Expect = 3e-61 Identities = 186/207 (89%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| | |||| |||||||||| ||||||| Sbjct: 479 tagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgggtgat 538 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||| ||||||||| Sbjct: 539 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggactgatgt 598 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| ||||||| |||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 599 tgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 658 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 659 tggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 157 bits (79), Expect = 5e-35 Identities = 180/211 (85%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagc-taaggtcccaa 320612 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 320613 aattaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 320671 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 320672 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 320731 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||||||||||||||| | | ||||||||| Sbjct: 320732 atgaacggggctaagcgttataccgaagctg 320762 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 149 bits (75), Expect = 1e-32 Identities = 179/211 (84%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagc-taaggtcccaa 3035 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 3036 aattaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 3094 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 3095 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 3154 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||| ||||||||||| | | ||||||||| Sbjct: 3155 atgaatggggctaagcgttataccgaagctg 3185 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 149 bits (75), Expect = 1e-32 Identities = 179/211 (84%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagc-taaggtcccaa 3036 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 3037 aattaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 3095 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 3096 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 3155 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||| ||||||||||| | | ||||||||| Sbjct: 3156 atgaatggggctaagcgttataccgaagctg 3186 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 184 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 240 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 241 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 202 bits (102), Expect = 9e-49 Identities = 198/226 (87%), Gaps = 3/226 (1%) Strand = Plus / Plus Query: 332 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 391 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 392 ctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccagg 451 ||||| ||| |||||| || ||||| |||||||||||| | |||| |||| ||||| Sbjct: 626 -taaggtccccaaatgataactaagtgagaaaggaggtgggag-tgcattgacaaccagg 683 Query: 452 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 511 |||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 684 aggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgct 743 Query: 512 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 557 | | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 744 cct-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 242 bits (122), Expect = 1e-60 Identities = 252/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 7 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 66 |||| ||||||| || ||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 67 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 126 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 127 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 186 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 187 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 243 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctggggggtaaagcact 499 Query: 244 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 |||||||||||||||| | || ||||||||||||||| ||||||| |||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaatac 551 Score = 194 bits (98), Expect = 2e-46 Identities = 200/230 (86%), Gaps = 3/230 (1%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| ||| |||| | ||| |||||||||||||||||| | |||| ||||| | || Sbjct: 626 c-taaggtccccaaatcattgctaagtgataaaggaggtgggag-tgcagagacaactag 683 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 684 gaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgc 743 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 560 | | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 744 tcct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 157 bits (79), Expect = 5e-35 Identities = 180/211 (85%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagc-taaggtcccaa 19845 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 19844 aattaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 19786 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 19785 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 19726 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||||||||||||||| | | ||||||||| Sbjct: 19725 atgaacggggctaagcgttataccgaagctg 19695 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 157 bits (79), Expect = 5e-35 Identities = 180/211 (85%), Gaps = 2/211 (0%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagc-taaggtcccaa 1599 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 1598 aattaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 1540 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 1539 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 1480 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||||||||||||||| | | ||||||||| Sbjct: 1479 atgaacggggctaagcgttataccgaagctg 1449 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 149 bits (75), Expect = 1e-32 Identities = 179/211 (84%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||| | Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagc-taaggtcccaa 316101 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 316102 aattaacgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 316160 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 316161 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 316220 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||| ||||||||||| | | ||||||||| Sbjct: 316221 atgaatggggctaagcgttataccgaagctg 316251 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcga 279 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 242 bits (122), Expect = 1e-60 Identities = 265/307 (86%), Gaps = 8/307 (2%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 60 ||||||||||||||| ||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 654 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaacccgggtg 713 Query: 61 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 120 |||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| ||| Sbjct: 714 atctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgat 773 Query: 121 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 180 |||||| |||| |||||||||||||| |||||| ||||| ||| |||||| | |||||| Sbjct: 774 gttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaactcggagcta 833 Query: 181 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 237 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 834 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 892 Query: 238 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 296 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 893 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 952 Query: 297 agatatg 303 ||||||| Sbjct: 953 agatatg 959 Score = 129 bits (65), Expect = 1e-26 Identities = 172/205 (83%), Gaps = 2/205 (0%) Strand = Plus / Plus Query: 352 aagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggcccctaaatgaccg 411 ||||||||| ||| ||||||||||||||| |||||||||| ||||||||||||||| | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagc-taaggcccctaaatggtca 2765 Query: 412 ctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctagaagcagcc 471 || |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||| Sbjct: 2766 ctaagtggtaaaggatgtgagaa-tgctgaaacaaccaggaggtttgcttagaagcagcc 2824 Query: 472 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 531 |||||| ||||||||||||||||||||||| | |||| ||||||| || ||| ||| Sbjct: 2825 acccttcaaagagtgcgtaatagctcactggtaaagcgttcttgcgccgataatggccgg 2884 Query: 532 ggctaagcgatctgccgaagctgtg 556 | ||||| || |||||||||||||| Sbjct: 2885 gactaagtgacctgccgaagctgtg 2909
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 167 bits (84), Expect = 5e-38 Identities = 179/208 (86%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| || |||| | || |||||||||||||||||| | |||| ||||| |||| Sbjct: 1659503 c-taaggtcctcaaatcagaacttagtgataaaggaggtgggag-tgcatagacaaccag 1659560 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 1659561 gaggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 1659620 Query: 511 ccttgcgctgaagatgaacggggctaag 538 | ||||| ||| ||||||||||||||| Sbjct: 1659621 tcctgcgccgaaaatgaacggggctaag 1659648 Score = 167 bits (84), Expect = 5e-38 Identities = 179/208 (86%), Gaps = 2/208 (0%) Strand = Plus / Minus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| || |||| | || |||||||||||||||||| | |||| ||||| |||| Sbjct: 1049241 c-taaggtcctcaaatcagaacttagtgataaaggaggtgggag-tgcatagacaaccag 1049184 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 1049183 gaggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 1049124 Query: 511 ccttgcgctgaagatgaacggggctaag 538 | ||||| ||| ||||||||||||||| Sbjct: 1049123 tcctgcgccgaaaatgaacggggctaag 1049096 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 291 aatac 295 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 291 aatac 295 ||||| Sbjct: 1049320 aatac 1049316
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 242 bits (122), Expect = 1e-60 Identities = 188/210 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 633 agcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatc 692 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || |||||||||||||||||||| | ||| ||| ||||||||||||||| |||||| Sbjct: 693 taaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgtt 752 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| || ||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 753 gaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 812 Query: 184 ggttctccccgaaatgcgttgaggcgcagc 213 |||||||||||||||||||||||||||||| Sbjct: 813 ggttctccccgaaatgcgttgaggcgcagc 842 Score = 234 bits (118), Expect = 3e-58 Identities = 201/226 (88%), Gaps = 2/226 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||||||| ||||||||||| |||| ||||||||| | | |||||||||| |||| Sbjct: 1004 c-taaggccccaaaatgaccgctaagtggcaaaggaggtaagag-tgcaaagacaaccag 1061 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1062 gaggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgc 1121 Query: 511 ccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 556 || |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1122 tctcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 226 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 285 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 286 ctctgaatactagata 301 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 242 bits (122), Expect = 1e-60 Identities = 264/308 (85%), Gaps = 10/308 (3%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaacctgg 57 ||||||||||||||||||||||||||| | |||||| |||||||||||||| || Sbjct: 825 tagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacccgaacccgg 884 Query: 58 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 117 |||||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| Sbjct: 885 gtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgacc 944 Query: 118 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 177 ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| | ||| Sbjct: 945 gatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaactcggag 1004 Query: 178 ctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatctagggg 234 |||||||| ||||||||||||||||||||||||||| | ||||| | |||||| || Sbjct: 1005 ctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatctagagg 1063 Query: 235 taaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaat 293 |||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| |||| Sbjct: 1064 taaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactcagaat 1123 Query: 294 actagata 301 |||||||| Sbjct: 1124 actagata 1131 Score = 109 bits (55), Expect = 1e-20 Identities = 159/191 (83%), Gaps = 2/191 (1%) Strand = Plus / Plus Query: 366 agagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgataaagg 425 ||||||||||||||| |||||||||| ||||||||||||||| | || |||| ||||| Sbjct: 1180 agagggaaacagcccagatcaccagc-taaggcccctaaatggtcactaagtggaaaagg 1238 Query: 426 aggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagt 485 | ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1239 atgtgagaa-tgctgaaacaaccaggaggtttgcttagaagcagccacccttgaaagagt 1297 Query: 486 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 545 |||||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||| Sbjct: 1298 gcgtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctg 1357 Query: 546 ccgaagctgtg 556 ||||||||||| Sbjct: 1358 ccgaagctgtg 1368
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 167 bits (84), Expect = 5e-38 Identities = 179/208 (86%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| || |||| | || |||||||||||||||||| | |||| ||||| |||| Sbjct: 1265 c-taaggtcctcaaatcagaacttagtgataaaggaggtgggag-tgcatagacaaccag 1322 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 1323 gaggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 1382 Query: 511 ccttgcgctgaagatgaacggggctaag 538 | ||||| ||| ||||||||||||||| Sbjct: 1383 tcctgcgccgaaaatgaacggggctaag 1410 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 291 aatac 295 ||||| Sbjct: 1186 aatac 1190
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||||| |||| | |||| |||||||||| |||||||| Sbjct: 2851 agcgaaagcgagtctgaatagggcgatggtcagtatttatagacccgaacccgggtgatc 2910 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| ||| || | | |||||||||||||||||||||| Sbjct: 2911 taaccatggccaggatgaagcttgggtgataccacgtggaggtccgaaccgactgatgtt 2970 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2971 gaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 3030 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||| ||||| Sbjct: 3031 ggttctccccgaaatacgtttaggcg 3056 Score = 165 bits (83), Expect = 2e-37 Identities = 181/211 (85%), Gaps = 2/211 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || | ||||| ||||| ||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagc-taaggtcccta 3230 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| Sbjct: 3231 aataagcgctaagtgataaaggaggtgggat-tgcccagacaaccaggaggtttgcctag 3289 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| Sbjct: 3290 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaa 3349 Query: 524 atgaacggggctaagcgatctgccgaagctg 554 ||||||||||||||||| | | ||||||||| Sbjct: 3350 atgaacggggctaagcgttttaccgaagctg 3380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 231 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 289 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 290 gaatac 295 |||||| Sbjct: 3139 gaatac 3144
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 4 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 63 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 64 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 123 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 124 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 183 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 184 ggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 167 bits (84), Expect = 5e-38 Identities = 179/208 (86%), Gaps = 2/208 (0%) Strand = Plus / Minus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| || |||| | || |||||||||||||||||| | |||| ||||| |||| Sbjct: 2657283 c-taaggtcctcaaatcagaacttagtgataaaggaggtgggag-tgcatagacaaccag 2657226 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 2657225 gaggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 2657166 Query: 511 ccttgcgctgaagatgaacggggctaag 538 | ||||| ||| ||||||||||||||| Sbjct: 2657165 tcctgcgccgaaaatgaacggggctaag 2657138 Score = 167 bits (84), Expect = 5e-38 Identities = 179/208 (86%), Gaps = 2/208 (0%) Strand = Plus / Plus Query: 331 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 390 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 391 cctaaggcccctaaatgaccgctcagtgataaaggaggtggggggtgcaaagacagccag 450 | ||||| || |||| | || |||||||||||||||||| | |||| ||||| |||| Sbjct: 571638 c-taaggtcctcaaatcagaacttagtgataaaggaggtgggag-tgcatagacaaccag 571695 Query: 451 gaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 510 |||||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 571696 gaggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 571755 Query: 511 ccttgcgctgaagatgaacggggctaag 538 | ||||| ||| ||||||||||||||| Sbjct: 571756 tcctgcgccgaaaatgaacggggctaag 571783 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 291 aatac 295 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 231 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 290 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 291 aatac 295 ||||| Sbjct: 571559 aatac 571563
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 240 bits (121), Expect = 4e-60 Identities = 236/272 (86%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 32 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 91 |||||| |||||||||||||||| |||||||||| |||| |||||||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccaggatgaaatttgggta 915 Query: 92 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 151 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| |||| Sbjct: 916 acaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattag 975 Query: 152 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 211 ||| ||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 976 gggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgca 1035 Query: 212 gcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcgg 268 || ||| || | |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1036 gcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcgg 1095 Query: 269 taccaaatcgaggcaaactctgaatactagat 300 |||||| ||| ||||||||| ||||||||||| Sbjct: 1096 taccaagtcgtggcaaactcagaatactagat 1127 Score = 101 bits (51), Expect = 3e-18 Identities = 158/191 (82%), Gaps = 2/191 (1%) Strand = Plus / Plus Query: 366 agagggaaacagcccggatcaccagcctaaggcccctaaatgaccgctcagtgataaagg 425 ||||||||||||||| |||||||||| ||||||||||||||| | || |||| ||||| Sbjct: 1177 agagggaaacagcccagatcaccagc-taaggcccctaaatggtcactaagtggaaaagg 1235 Query: 426 aggtggggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagt 485 | ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | ||||| Sbjct: 1236 atgtgagaa-tgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagt 1294 Query: 486 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 545 |||||||||||||||| | |||| ||||||| || ||| |||| ||||| || ||| Sbjct: 1295 gcgtaatagctcactggtaaagcgttcttgcgccgacaatggccgggactaagtgacctg 1354 Query: 546 ccgaagctgtg 556 ||||||||||| Sbjct: 1355 ccgaagctgtg 1365
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 240 bits (121), Expect = 4e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 30 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 89 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 39703 Query: 90 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 149 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 39702 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 39643 Query: 150 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 39642 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 39583 Query: 210 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 268 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 39582 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 39523 Query: 269 taccaaatcgaggcaaactctgaatacta 297 ||||||||||| ||||||||||||||||| Sbjct: 39522 taccaaatcgatgcaaactctgaatacta 39494 Score = 240 bits (121), Expect = 4e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 30 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 89 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 19697 Query: 90 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 149 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 19698 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 19757 Query: 150 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 209 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 19758 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 19817 Query: 210 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 268 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 19818 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 19877 Query: 269 taccaaatcgaggcaaactctgaatacta 297 ||||||||||| ||||||||||||||||| Sbjct: 19878 taccaaatcgatgcaaactctgaatacta 19906 Score = 145 bits (73), Expect = 2e-31 Identities = 183/217 (84%), Gaps = 2/217 (0%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| | ||||||||||||| || |||||| ||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagt-taaggccccta 39410 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||| Sbjct: 39409 aataattgctaagtgataaaggatgtgggaa-tgctgagacaatcaggaggttcgcctag 39351 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| Sbjct: 39350 aagcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaa 39291 Query: 524 atgaacggggctaagcgatctgccgaagctgtgggat 560 |||| ||| ||||| || ||||||||||||||||| Sbjct: 39290 atgactgggactaagtaatttgccgaagctgtgggat 39254 Score = 145 bits (73), Expect = 2e-31 Identities = 183/217 (84%), Gaps = 2/217 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| | ||||||||||||| || |||||| ||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagt-taaggccccta 19990 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||| Sbjct: 19991 aataattgctaagtgataaaggatgtgggaa-tgctgagacaatcaggaggttcgcctag 20049 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||| | ||||||||||||||||||||||||||||||| ||||| | ||||| ||| Sbjct: 20050 aagcagctatcctttaaagagtgcgtaatagctcactgatcaagcgcacctgcgccgaaa 20109 Query: 524 atgaacggggctaagcgatctgccgaagctgtgggat 560 |||| ||| ||||| || ||||||||||||||||| Sbjct: 20110 atgactgggactaagtaatttgccgaagctgtgggat 20146
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 46 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 105 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 106 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 165 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 166 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 225 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 226 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 284 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 285 actctgaatacta 297 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 188 bits (95), Expect = 1e-44 Identities = 190/219 (86%), Gaps = 2/219 (0%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| | Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagt-taaggccccaa 1468 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | ||| |||| ||||||||||||| | ||| ||||| ||||||||||||||||| Sbjct: 1469 aataatagctaagtggtaaaggaggtgggag-tgcttagacaaccaggaggtttgcctag 1527 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 1528 aagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaa 1587 Query: 524 atgaacggggctaagcgatctgccgaagctgtgggatgt 562 ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 1588 atgaaagggactaagctatttgccgaagctgtgggatgt 1626
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 45 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 104 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 105 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 164 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 165 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 224 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 225 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 282 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 283 aaactctgaatactagatatg 303 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 73.8 bits (37), Expect = 6e-10 Identities = 55/61 (90%) Strand = Plus / Plus Query: 441 agacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 500 ||||| |||| |||||||| |||||||||| | |||||||||||||||||| |||||||| Sbjct: 3092 agacaaccagaaggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcact 3151 Query: 501 g 501 | Sbjct: 3152 g 3152
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 236 bits (119), Expect = 7e-59 Identities = 185/207 (89%) Strand = Plus / Minus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1775848 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 1775789 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||| || Sbjct: 1775788 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactggcgt 1775729 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 1775728 tgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 1775669 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 1775668 tggttctccccgaaatacgttgaggcg 1775642 Score = 236 bits (119), Expect = 7e-59 Identities = 185/207 (89%) Strand = Plus / Plus Query: 3 tagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgat 62 |||||||||||||||| ||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 376221 tagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgggtgat 376280 Query: 63 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 122 ||| ||||| |||||||||||||||| ||| || ||| ||||||||||||||||| || Sbjct: 376281 ctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactggcgt 376340 Query: 123 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 182 |||| | ||||||||||| |||||||||||||||||||||| |||||||| |||||||| Sbjct: 376341 tgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagc 376400 Query: 183 tggttctccccgaaatgcgttgaggcg 209 |||||||||||||||| |||||||||| Sbjct: 376401 tggttctccccgaaatacgttgaggcg 376427 Score = 149 bits (75), Expect = 1e-32 Identities = 167/195 (85%), Gaps = 2/195 (1%) Strand = Plus / Minus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||||||||||||||||||| || | ||||| ||||| ||| | Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagc-taaggtcccca 1775468 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 1775467 aatcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctag 1775409 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||| | ||| Sbjct: 1775408 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcaccgaaa 1775349 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 1775348 atgaacggggctaag 1775334 Score = 149 bits (75), Expect = 1e-32 Identities = 167/195 (85%), Gaps = 2/195 (1%) Strand = Plus / Plus Query: 344 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcctaaggccccta 403 ||||||||||||| ||| ||||||||||||||||||| || | ||||| ||||| ||| | Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagc-taaggtcccca 376601 Query: 404 aatgaccgctcagtgataaaggaggtggggggtgcaaagacagccaggaggtttgcctag 463 ||| | | || |||||||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 376602 aatcaacactaagtgataaaggaggtgggat-tgcatagacaaccaggaggtttgcctag 376660 Query: 464 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 523 ||||||||| ||| || |||||||||||||||||||| ||||||| | ||| | ||| Sbjct: 376661 aagcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcaccgaaa 376720 Query: 524 atgaacggggctaag 538 ||||||||||||||| Sbjct: 376721 atgaacggggctaag 376735 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 245 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 295 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,672,660 Number of Sequences: 3902068 Number of extensions: 3672660 Number of successful extensions: 70424 Number of sequences better than 10.0: 2888 Number of HSP's better than 10.0 without gapping: 2919 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 52960 Number of HSP's gapped (non-prelim): 16065 length of query: 581 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 558 effective length of database: 17,143,297,704 effective search space: 9565960118832 effective search space used: 9565960118832 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
