Clone Information

BLAST Search Result

Clone Name	basd13n01
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ref\|XM_479469.1\| Oryza sativa (japonica cultivar-group), mRNA	293	3e-76
2	dbj\|AK067432.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	293	3e-76
3	gb\|BT019198.1\| Zea mays clone Contig871.F mRNA sequence	163	7e-37
4	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	121	2e-24
5	dbj\|AP004300.3\| Oryza sativa (japonica cultivar-group) genomic D...	121	2e-24
6	dbj\|AK066938.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	115	2e-22
7	gb\|AY112404.1\| Zea mays CL69005_1 mRNA sequence	115	2e-22
8	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	80	8e-12
9	gb\|AC148339.1\| Oryza sativa (japonica cultivar-group) chromosome...	80	8e-12
10	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	80	8e-12
11	gb\|AC161032.19\| Medicago truncatula clone mth2-21b7, complete se...	70	8e-09
12	gb\|AY106770.1\| Zea mays PCO089904 mRNA sequence	56	1e-04
13	dbj\|AK063910.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	54	5e-04
14	gb\|AY109177.1\| Zea mays PCO089905 mRNA sequence	52	0.002
15	gb\|AC146592.1\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.030
16	dbj\|AP008217.1\| Oryza sativa (japonica cultivar-group) genomic D...	48	0.030
17	gb\|DP000010.1\| Oryza sativa (japonica cultivar-group) chromosome...	48	0.030
18	gb\|AY110438.1\| Zea mays CL3068_1 mRNA sequence	42	1.9
19	gb\|AE008384.1\| Methanosarcina mazei strain Goe1, complete genome	42	1.9
20	gb\|K00981.1\|NEUQA2MUD N.crassa qa-2 gene mutant 158-106, 5' flank	42	1.9
21	dbj\|AB029459.1\| Salix gilgiana SgPG3 mRNA for polygalacturonase,...	42	1.9
22	ref\|NM_116481.2\| Arabidopsis thaliana ATP binding / ATPase/ nucl...	40	7.3
23	gb\|CP000109.1\| Thiomicrospira crunogena XCL-2, complete genome	40	7.3
24	gb\|BT016450.1\| Zea mays clone Contig283 mRNA sequence	40	7.3
25	gb\|AC135431.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	7.3
26	gb\|AC165174.2\| Zea mays clone ZMMBBb-127F19, complete sequence	40	7.3
27	gb\|AC134303.2\| Homo sapiens chromosome 19 clone LLNLR-265H6, com...	40	7.3
28	emb\|Z81491.1\|CED1086 Caenorhabditis elegans Cosmid D1086, comple...	40	7.3
29	gb\|AC116129.13\| Mus musculus chromosome 1, clone RP23-98F11, com...	40	7.3
30	gb\|AY090948.1\| Arabidopsis thaliana unknown protein (At4g02480) ...	40	7.3
31	emb\|X14603.1\|NCQA Neurospora crassa qa gene cluster	40	7.3
32	emb\|AL161494.2\|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, c...	40	7.3
33	emb\|AL732581.5\| Mouse DNA sequence from clone RP24-262H17 on chr...	40	7.3
34	gb\|AC011499.5\| Homo sapiens chromosome 19 clone CTB-54O9, comple...	40	7.3
35	gb\|AC108101.2\| Homo sapiens chromosome 5 clone RP11-125H10, comp...	40	7.3
36	gb\|AC092280.2\| Homo sapiens chromosome 5 clone CTD-2028M21, comp...	40	7.3
37	gb\|AC011466.6\| Homo sapiens chromosome 19 clone CTC-453G23, comp...	40	7.3
38	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	7.3
39	gb\|DQ002945.1\| Dyacopterus spadiceus isolate DS10 12S ribosomal ...	40	7.3
40	gb\|AC093320.24\| Mus musculus strain C57BL/6J chromosome 1 clone ...	40	7.3
41	gb\|AF069298.1\|T14P8 Arabidopsis thaliana BAC T14P8	40	7.3
42	emb\|BX648568.1\|HSM808716 Homo sapiens mRNA; cDNA DKFZp779L0366 (...	40	7.3
43	gb\|AC006229.17\|AC006229 Homo sapiens chromosome 4 clone C0011D19...	40	7.3
44	gb\|AY555142.1\| Zea mays BAC clone c573F08, complete sequence	40	7.3
45	gb\|AY104413.1\| Zea mays PCO098503 mRNA sequence	40	7.3
46	gb\|AY664414.1\| Zea mays cultivar B73 locus 9008, complete sequence	40	7.3
47	gb\|AC127589.4\| Mus musculus BAC clone RP23-134K6 from 5, complet...	40	7.3
48	gb\|K00977.1\|NEUQA2WT N.crassa wild type qa-2 gene, 5' flank	40	7.3
49	gb\|K00982.1\|NEUQA2MUE N.crassa qa-2 gene mutant 158-33, 5' flank	40	7.3
50	gb\|K00980.1\|NEUQA2MUC N.crassa qa-2 gene mutants 162-4 and 162-5...	40	7.3
51	gb\|K00979.1\|NEUQA2MUB N.crassa qa-2 gene mutant 158-6, 5' flank	40	7.3
52	gb\|K00978.1\|NEUQA2MUA N.crassa qa-2 gene mutant 158-99, 5' flank	40	7.3

>ref|XM_479469.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3673

 Score =  293 bits (148), Expect = 3e-76
 Identities = 317/374 (84%)
 Strand = Plus / Plus

                                                                        
Query: 16   ttagtgtaatactagccaaagaagatttggccgaagatgtagatctagaagcagtggcca 75
            |||| |||||||| ||||||||||||||||| || ||||||||||| |||||  |||| |
Sbjct: 3035 ttagcgtaatactggccaaagaagatttggctgatgatgtagatctggaagctctggcta 3094

                                                                        
Query: 76   gcttgactgaggggtattcaggcagngatctgaagaatctgtgtattaccgctgcacatc 135
             ||||||||| || ||||||||||| ||| |||||||||||||| | || ||||||||| 
Sbjct: 3095 acttgactgatggttattcaggcagtgatatgaagaatctgtgtgtaactgctgcacatt 3154

                                                                        
Query: 136  gtcccataagggaaatccttgacaaagagaagaaggagagactcttagcagaagcagaaa 195
            | ||||||||||| |||||||| | ||||||||||||||||   | ||||||||||||||
Sbjct: 3155 gccccataagggagatccttgaaagagagaagaaggagagagcatcagcagaagcagaaa 3214

                                                                        
Query: 196  acaaaccattgcctcctaagtattctagcagtgatgtccgtcctctaaatatgagtgatc 255
            | |||||||| |||||      ||||||||||||||| ||| | ||||  ||||  ||| 
Sbjct: 3215 ataaaccattacctccccctcgttctagcagtgatgttcgttccctaagaatgaacgatt 3274

                                                                        
Query: 256  tcaaacaggcacacgagcaggtatgtgcaagtatatcatctgattcgacaaatatgaacg 315
            ||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||  |
Sbjct: 3275 tcaaacatgcacatgagcaggtatgtgcaagtataacatctgattcgagaaatatgactg 3334

                                                                        
Query: 316  agcttgttcagtggaacgagctttacggngaaggcggatctagaaagaagacacctctaa 375
            ||||| ||||||||||||| || || || |||||||| || || ||||||||  ||||||
Sbjct: 3335 agcttattcagtggaacgatctatatggagaaggcgggtccaggaagaagacttctctaa 3394

                          
Query: 376  gctacttcatgtag 389
            ||||||||||||||
Sbjct: 3395 gctacttcatgtag 3408

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>dbj|AK067432.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100B13, full
            insert sequence
          Length = 3673

 Score =  293 bits (148), Expect = 3e-76
 Identities = 317/374 (84%)
 Strand = Plus / Plus

                                                                        
Query: 16   ttagtgtaatactagccaaagaagatttggccgaagatgtagatctagaagcagtggcca 75
            |||| |||||||| ||||||||||||||||| || ||||||||||| |||||  |||| |
Sbjct: 3035 ttagcgtaatactggccaaagaagatttggctgatgatgtagatctggaagctctggcta 3094

                                                                        
Query: 76   gcttgactgaggggtattcaggcagngatctgaagaatctgtgtattaccgctgcacatc 135
             ||||||||| || ||||||||||| ||| |||||||||||||| | || ||||||||| 
Sbjct: 3095 acttgactgatggttattcaggcagtgatatgaagaatctgtgtgtaactgctgcacatt 3154

                                                                        
Query: 136  gtcccataagggaaatccttgacaaagagaagaaggagagactcttagcagaagcagaaa 195
            | ||||||||||| |||||||| | ||||||||||||||||   | ||||||||||||||
Sbjct: 3155 gccccataagggagatccttgaaagagagaagaaggagagagcatcagcagaagcagaaa 3214

                                                                        
Query: 196  acaaaccattgcctcctaagtattctagcagtgatgtccgtcctctaaatatgagtgatc 255
            | |||||||| |||||      ||||||||||||||| ||| | ||||  ||||  ||| 
Sbjct: 3215 ataaaccattacctccccctcgttctagcagtgatgttcgttccctaagaatgaacgatt 3274

                                                                        
Query: 256  tcaaacaggcacacgagcaggtatgtgcaagtatatcatctgattcgacaaatatgaacg 315
            ||||||| ||||| ||||||||||||||||||||| |||||||||||| ||||||||  |
Sbjct: 3275 tcaaacatgcacatgagcaggtatgtgcaagtataacatctgattcgagaaatatgactg 3334

                                                                        
Query: 316  agcttgttcagtggaacgagctttacggngaaggcggatctagaaagaagacacctctaa 375
            ||||| ||||||||||||| || || || |||||||| || || ||||||||  ||||||
Sbjct: 3335 agcttattcagtggaacgatctatatggagaaggcgggtccaggaagaagacttctctaa 3394

                          
Query: 376  gctacttcatgtag 389
            ||||||||||||||
Sbjct: 3395 gctacttcatgtag 3408

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>gb|BT019198.1| Zea mays clone Contig871.F mRNA sequence
          Length = 1247

 Score =  163 bits (82), Expect = 7e-37
 Identities = 156/181 (86%)
 Strand = Plus / Plus

                                                                       
Query: 16  ttagtgtaatactagccaaagaagatttggccgaagatgtagatctagaagcagtggcca 75
           ||||||| |||||||| |||||||||||||| || ||||||||||| || ||  | || |
Sbjct: 684 ttagtgtgatactagcaaaagaagatttggcagatgatgtagatctggaggcgctagcaa 743

                                                                       
Query: 76  gcttgactgaggggtattcaggcagngatctgaagaatctgtgtattaccgctgcacatc 135
            | |||| || |||||||||||||| ||||||||||| |||||||| || || |||||||
Sbjct: 744 acctgacagatgggtattcaggcagtgatctgaagaacctgtgtataactgcagcacatc 803

                                                                       
Query: 136 gtcccataagggaaatccttgacaaagagaagaaggagagactcttagcagaagcagaaa 195
           |||||||||||||||| ||||| | ||||||||||||||||  |||||| ||||||||||
Sbjct: 804 gtcccataagggaaattcttgaaagagagaagaaggagagaaccttagctgaagcagaaa 863

            
Query: 196 a 196
           |
Sbjct: 864 a 864



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 116/141 (82%)
 Strand = Plus / Plus

                                                                        
Query: 249  agtgatctcaaacaggcacacgagcaggtatgtgcaagtatatcatctgattcgacaaat 308
            |||||| |||| || ||||| |||||||| ||||| ||||||||||| ||||| | ||||
Sbjct: 917  agtgatttcaagcacgcacatgagcaggtttgtgcgagtatatcatcggattcaaaaaat 976

                                                                        
Query: 309  atgaacgagcttgttcagtggaacgagctttacggngaaggcggatctagaaagaagaca 368
            ||||| ||||| || || |||||||| || ||||| |||||||| || ||  | ||||||
Sbjct: 977  atgaatgagctcgtccaatggaacgacctctacggagaaggcgggtcgaggcacaagaca 1036

                                 
Query: 369  cctctaagctacttcatgtag 389
            ||  | |||||||| ||||||
Sbjct: 1037 ccgttgagctactttatgtag 1057

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  121 bits (61), Expect = 2e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                            
Query: 274      aggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaacg 333
                ||||||||||||||||| |||||||||||| ||||||||  |||||| ||||||||||||
Sbjct: 28381330 aggtatgtgcaagtataacatctgattcgagaaatatgactgagcttattcagtggaacg 28381389

                                                                        
Query: 334      agctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
                | || || || |||||||| || || ||||||||  ||||||||||||||||||||
Sbjct: 28381390 atctatatggagaaggcgggtccaggaagaagacttctctaagctacttcatgtag 28381445



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                            
Query: 16       ttagtgtaatactagccaaagaagatttggccgaagatgtagatctagaagcagtggcca 75
                |||| |||||||| ||||||||||||||||| || ||||||||||| |||||  |||| |
Sbjct: 28380383 ttagcgtaatactggccaaagaagatttggctgatgatgtagatctggaagctctggcta 28380442

                                                   
Query: 76       gcttgactgaggggtattcaggcagngatctgaag 110
                 ||||||||| || ||||||||||| ||| |||||
Sbjct: 28380443 acttgactgatggttattcaggcagtgatatgaag 28380477



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                            
Query: 109      agaatctgtgtattaccgctgcacatcgtcccataagggaaatccttgacaaagagaaga 168
                ||||||||||| | || ||||||||| | ||||||||||| |||||||| | ||||||||
Sbjct: 28380583 agaatctgtgtgtaactgctgcacattgccccataagggagatccttgaaagagagaaga 28380642

                   
Query: 169      agg 171
                |||
Sbjct: 28380643 agg 28380645



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                            
Query: 182      agcagaagcagaaaacaaaccattgcctcctaagtattctagcagtgatgtccgtcctct 241
                ||||||||||||||| |||||||| |||||      ||||||||||||||| ||| | ||
Sbjct: 28380937 agcagaagcagaaaataaaccattacctccccctcgttctagcagtgatgttcgttccct 28380996

                                                     
Query: 242      aaatatgagtgatctcaaacaggcacacgagcaggta 278
                ||  ||||  ||| ||||||| ||||| |||||||||
Sbjct: 28380997 aagaatgaacgatttcaaacatgcacatgagcaggta 28381033

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>dbj|AP004300.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0470D12
          Length = 157248

 Score =  121 bits (61), Expect = 2e-24
 Identities = 102/116 (87%)
 Strand = Plus / Plus

                                                                          
Query: 274    aggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaacg 333
              ||||||||||||||||| |||||||||||| ||||||||  |||||| ||||||||||||
Sbjct: 106893 aggtatgtgcaagtataacatctgattcgagaaatatgactgagcttattcagtggaacg 106952

                                                                      
Query: 334    agctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
              | || || || |||||||| || || ||||||||  ||||||||||||||||||||
Sbjct: 106953 atctatatggagaaggcgggtccaggaagaagacttctctaagctacttcatgtag 107008



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 82/95 (86%)
 Strand = Plus / Plus

                                                                          
Query: 16     ttagtgtaatactagccaaagaagatttggccgaagatgtagatctagaagcagtggcca 75
              |||| |||||||| ||||||||||||||||| || ||||||||||| |||||  |||| |
Sbjct: 105946 ttagcgtaatactggccaaagaagatttggctgatgatgtagatctggaagctctggcta 106005

                                                 
Query: 76     gcttgactgaggggtattcaggcagngatctgaag 110
               ||||||||| || ||||||||||| ||| |||||
Sbjct: 106006 acttgactgatggttattcaggcagtgatatgaag 106040



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                          
Query: 109    agaatctgtgtattaccgctgcacatcgtcccataagggaaatccttgacaaagagaaga 168
              ||||||||||| | || ||||||||| | ||||||||||| |||||||| | ||||||||
Sbjct: 106146 agaatctgtgtgtaactgctgcacattgccccataagggagatccttgaaagagagaaga 106205

                 
Query: 169    agg 171
              |||
Sbjct: 106206 agg 106208



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                          
Query: 182    agcagaagcagaaaacaaaccattgcctcctaagtattctagcagtgatgtccgtcctct 241
              ||||||||||||||| |||||||| |||||      ||||||||||||||| ||| | ||
Sbjct: 106500 agcagaagcagaaaataaaccattacctccccctcgttctagcagtgatgttcgttccct 106559

                                                   
Query: 242    aaatatgagtgatctcaaacaggcacacgagcaggta 278
              ||  ||||  ||| ||||||| ||||| |||||||||
Sbjct: 106560 aagaatgaacgatttcaaacatgcacatgagcaggta 106596

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>dbj|AK066938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093A20, full
            insert sequence
          Length = 2902

 Score =  115 bits (58), Expect = 2e-22
 Identities = 144/173 (83%)
 Strand = Plus / Plus

                                                                        
Query: 24   atactagccaaagaagatttggccgaagatgtagatctagaagcagtggccagcttgact 83
            |||||||| |||||||||||||| || ||||| ||||| ||||| || || |||||||||
Sbjct: 1966 atactagctaaagaagatttggcagatgatgtcgatcttgaagctgtagctagcttgact 2025

                                                                        
Query: 84   gaggggtattcaggcagngatctgaagaatctgtgtattaccgctgcacatcgtcccata 143
            || |||||||| ||||| ||||| |||||||| |||||||| ||||| ||||  || || 
Sbjct: 2026 gaagggtattctggcagtgatctcaagaatctatgtattactgctgctcatctccctatt 2085

                                                                 
Query: 144  agggaaatccttgacaaagagaagaaggagagactcttagcagaagcagaaaa 196
            |  || |||||||| || ||||||||||||| |   |||||||| ||||||||
Sbjct: 2086 aaagatatccttgaaaaggagaagaaggagaaagctttagcagaggcagaaaa 2138



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 114/141 (80%)
 Strand = Plus / Plus

                                                                        
Query: 249  agtgatctcaaacaggcacacgagcaggtatgtgcaagtatatcatctgattcgacaaat 308
            |||||| ||||||| || || || ||||| ||||||||| | || || ||||| || || 
Sbjct: 2191 agtgatttcaaacatgctcatgaacaggtctgtgcaagtgtgtcttcggattcaactaac 2250

                                                                        
Query: 309  atgaacgagcttgttcagtggaacgagctttacggngaaggcggatctagaaagaagaca 368
            ||||| || ||| |||| ||||| || ||||| || ||||| ||||| || || ||||| 
Sbjct: 2251 atgaatgaacttattcaatggaatgatctttatggagaaggtggatcaaggaaaaagact 2310

                                 
Query: 369  cctctaagctacttcatgtag 389
             ||||||||||||||||||||
Sbjct: 2311 actctaagctacttcatgtag 2331

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>gb|AY112404.1| Zea mays CL69005_1 mRNA sequence
          Length = 631

 Score =  115 bits (58), Expect = 2e-22
 Identities = 114/133 (85%)
 Strand = Plus / Minus

                                                                       
Query: 19  gtgtaatactagccaaagaagatttggccgaagatgtagatctagaagcagtggccagct 78
           |||| |||||||| |||||||||||||| || ||||||||||| || ||  | || | | 
Sbjct: 631 gtgtgatactagcaaaagaagatttggcagatgatgtagatctggaggcgctagcaaacc 572

                                                                       
Query: 79  tgactgaggggtattcaggcagngatctgaagaatctgtgtattaccgctgcacatcgtc 138
           |||| || |||||||||||||| ||||||||||| |||||||| || || ||||||||||
Sbjct: 571 tgacagatgggtattcaggcagtgatctgaagaacctgtgtataactgcagcacatcgtc 512

                        
Query: 139 ccataagggaaat 151
           |||||||||||||
Sbjct: 511 ccataagggaaat 499



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 112/141 (79%)
 Strand = Plus / Minus

                                                                       
Query: 249 agtgatctcaaacaggcacacgagcaggtatgtgcaagtatatcatctgattcgacaaat 308
           |||||| |||| || ||||| |||||||| ||||| ||||||||||| |||||      |
Sbjct: 401 agtgatttcaagcacgcacatgagcaggtttgtgcgagtatatcatcggattcnnnnnnt 342

                                                                       
Query: 309 atgaacgagcttgttcagtggaacgagctttacggngaaggcggatctagaaagaagaca 368
           ||||| ||||| || || |||||||| || ||||| |||||||| || ||  | ||||||
Sbjct: 341 atgaatgagctcgtccaatggaacgacctctacggagaaggcgggtcgaggcacaagaca 282

                                
Query: 369 cctctaagctacttcatgtag 389
           ||  | |||||||| ||||||
Sbjct: 281 ccgttgagctactttatgtag 261

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                            
Query: 24       atactagccaaagaagatttggccgaagatgtagatctagaagcagtggccagcttgact 83
                |||||||| |||||||||||||| || ||||| ||||| ||||| || || |||||||||
Sbjct: 12812722 atactagctaaagaagatttggcagatgatgtcgatcttgaagctgtagctagcttgact 12812663

                                       
Query: 84       gaggggtattcaggcagngatct 106
                || |||||||| ||||| |||||
Sbjct: 12812662 gaagggtattctggcagtgatct 12812640



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 274      aggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaacg 333
                |||| ||||||||| | || || ||||| || || ||||| || ||| |||| ||||| |
Sbjct: 12811333 aggtctgtgcaagtgtgtcttcggattcaactaacatgaatgaacttattcaatggaatg 12811274

                                                                        
Query: 334      agctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
                | ||||| || ||||| ||||| || || |||||  ||||||||||||||||||||
Sbjct: 12811273 atctttatggagaaggtggatcaaggaaaaagactactctaagctacttcatgtag 12811218

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>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06,
             complete sequence
          Length = 132243

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                         
Query: 24    atactagccaaagaagatttggccgaagatgtagatctagaagcagtggccagcttgact 83
             |||||||| |||||||||||||| || ||||| ||||| ||||| || || |||||||||
Sbjct: 50938 atactagctaaagaagatttggcagatgatgtcgatcttgaagctgtagctagcttgact 50879

                                    
Query: 84    gaggggtattcaggcagngatct 106
             || |||||||| ||||| |||||
Sbjct: 50878 gaagggtattctggcagtgatct 50856



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                         
Query: 274   aggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaacg 333
             |||| ||||||||| | || || ||||| || || ||||| || ||| |||| ||||| |
Sbjct: 49549 aggtctgtgcaagtgtgtcttcggattcaactaacatgaatgaacttattcaatggaatg 49490

                                                                     
Query: 334   agctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
             | ||||| || ||||| ||||| || || |||||  ||||||||||||||||||||
Sbjct: 49489 atctttatggagaaggtggatcaaggaaaaagactactctaagctacttcatgtag 49434

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 72/83 (86%)
 Strand = Plus / Minus

                                                                            
Query: 24       atactagccaaagaagatttggccgaagatgtagatctagaagcagtggccagcttgact 83
                |||||||| |||||||||||||| || ||||| ||||| ||||| || || |||||||||
Sbjct: 12809485 atactagctaaagaagatttggcagatgatgtcgatcttgaagctgtagctagcttgact 12809426

                                       
Query: 84       gaggggtattcaggcagngatct 106
                || |||||||| ||||| |||||
Sbjct: 12809425 gaagggtattctggcagtgatct 12809403



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 94/116 (81%)
 Strand = Plus / Minus

                                                                            
Query: 274      aggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaacg 333
                |||| ||||||||| | || || ||||| || || ||||| || ||| |||| ||||| |
Sbjct: 12808096 aggtctgtgcaagtgtgtcttcggattcaactaacatgaatgaacttattcaatggaatg 12808037

                                                                        
Query: 334      agctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
                | ||||| || ||||| ||||| || || |||||  ||||||||||||||||||||
Sbjct: 12808036 atctttatggagaaggtggatcaaggaaaaagactactctaagctacttcatgtag 12807981

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>gb|AC161032.19| Medicago truncatula clone mth2-21b7, complete sequence
          Length = 130355

 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 97/118 (82%)
 Strand = Plus / Plus

                                                                         
Query: 272   gcaggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaa 331
             |||||| ||||||||| | ||||| || ||||||||||||||||||||    || |||||
Sbjct: 21801 gcaggtgtgtgcaagtgtgtcatcagagtcgacaaatatgaacgagctacaacaatggaa 21860

                                                                       
Query: 332   cgagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
              || || || || ||||||||||| ||||| | || | || |||||||||||||||||
Sbjct: 21861 tgatctctatggagaaggcggatcgagaaaaatgaaatctttaagctacttcatgtag 21918

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>gb|AY106770.1| Zea mays PCO089904 mRNA sequence
          Length = 616

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 66/79 (83%)
 Strand = Plus / Plus

                                                                       
Query: 309 atgaacgagcttgttcagtggaacgagctttacggngaaggcggatctagaaagaagaca 368
           |||||||||||  |||| |||||||| || ||||| |||||||| || || ||||||| |
Sbjct: 110 atgaacgagctccttcaatggaacgacctgtacggtgaaggcgggtcaaggaagaagaaa 169

                              
Query: 369 cctctaagctacttcatgt 387
            | || |||||||||||||
Sbjct: 170 gcgctgagctacttcatgt 188

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>dbj|AK063910.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-A05, full
           insert sequence
          Length = 1227

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 95/118 (80%)
 Strand = Plus / Plus

                                                                       
Query: 270 gagcaggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtgg 329
           |||||||| ||||||||  | |||||||||||  |||| ||||| || ||| |||| |||
Sbjct: 609 gagcaggtttgtgcaagcgtttcatctgattcagcaaacatgaatgaacttcttcaatgg 668

                                                                     
Query: 330 aacgagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgt 387
           ||||| || || || || ||||| || || ||||||| | | || |||||||||||||
Sbjct: 669 aacgacctatatggcgagggcggttcgaggaagaagaaagcactgagctacttcatgt 726

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>gb|AY109177.1| Zea mays PCO089905 mRNA sequence
          Length = 1098

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 79/97 (81%)
 Strand = Plus / Plus

                                                                       
Query: 291 tcatctgattcgacaaatatgaacgagcttgttcagtggaacgagctttacggngaaggc 350
           ||||| || ||| |||| |||||||||||| | || |||||||| || ||||| ||||||
Sbjct: 349 tcatccgactcggcaaacatgaacgagcttctccaatggaacgacctgtacggtgaaggc 408

                                                
Query: 351 ggatctagaaagaagacacctctaagctacttcatgt 387
           || || || |||| || | | || |||||||||||||
Sbjct: 409 gggtcgaggaagaggaaagcgctgagctacttcatgt 445



 Score = 44.1 bits (22), Expect = 0.47
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 79  tgactgaggggtattcaggcagngatctgaagaatctgtgt 119
           ||||||| || |||||||| || || |||||||||||||||
Sbjct: 137 tgactgatggttattcaggaagcgacctgaagaatctgtgt 177

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>gb|AC146592.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0010P23 PCR product, complete sequence
          Length = 19234

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 92/115 (80%)
 Strand = Plus / Minus

                                                                         
Query: 273   caggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaac 332
             ||||| ||||||||  | |||||||||||  |||| ||||| || ||| |||| ||||||
Sbjct: 15542 caggtttgtgcaagcgtttcatctgattcagcaaacatgaatgaacttcttcaatggaac 15483

                                                                    
Query: 333   gagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgt 387
             || || || || || ||||| || || ||||||| | | || |||||||||||||
Sbjct: 15482 gacctatatggcgagggcggttcgaggaagaagaaagcactgagctacttcatgt 15428

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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 92/115 (80%)
 Strand = Plus / Minus

                                                                            
Query: 273      caggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaac 332
                ||||| ||||||||  | |||||||||||  |||| ||||| || ||| |||| ||||||
Sbjct: 25685332 caggtttgtgcaagcgtttcatctgattcagcaaacatgaatgaacttcttcaatggaac 25685273

                                                                       
Query: 333      gagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgt 387
                || || || || || ||||| || || ||||||| | | || |||||||||||||
Sbjct: 25685272 gacctatatggcgagggcggttcgaggaagaagaaagcactgagctacttcatgt 25685218

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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 92/115 (80%)
 Strand = Plus / Minus

                                                                            
Query: 273      caggtatgtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaac 332
                ||||| ||||||||  | |||||||||||  |||| ||||| || ||| |||| ||||||
Sbjct: 26004002 caggtttgtgcaagcgtttcatctgattcagcaaacatgaatgaacttcttcaatggaac 26003943

                                                                       
Query: 333      gagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatgt 387
                || || || || || ||||| || || ||||||| | | || |||||||||||||
Sbjct: 26003942 gacctatatggcgagggcggttcgaggaagaagaaagcactgagctacttcatgt 26003888

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>gb|AY110438.1| Zea mays CL3068_1 mRNA sequence
          Length = 1022

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 16  ttagtgtaatactagccaaagaaga 40
           ||||||||||||||||||| |||||
Sbjct: 882 ttagtgtaatactagccaaggaaga 858



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 131/170 (77%)
 Strand = Plus / Minus

                                                                       
Query: 220 ctagcagtgatgtccgtcctctaaatatgagtgatctcaaacaggcacacgagcaggtat 279
           |||||| |||||||||| |  |||  || |||||| ||| ||| || || || ||||| |
Sbjct: 678 ctagcaatgatgtccgtgcattaagaataagtgatttcatacatgcgcatgaacaggtgt 619

                                                                       
Query: 280 gtgcaagtatatcatctgattcgacaaatatgaacgagcttgttcagtggaacgagcttt 339
           |||||||| | || || ||||| |  || |||||||||||||| || ||||| || || |
Sbjct: 618 gtgcaagtgtttcctcagattccagtaacatgaacgagcttgtgcaatggaatgatctct 559

                                                             
Query: 340 acggngaaggcggatctagaaagaagacacctctaagctacttcatgtag 389
           | || |||||||| || ||      |||| | ||||||||||||||||||
Sbjct: 558 atggagaaggcgggtcaaggnnnnngacaacgctaagctacttcatgtag 509

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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 140    cataagggaaatccttgacaa 160
              |||||||||||||||||||||
Sbjct: 851734 cataagggaaatccttgacaa 851754

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>gb|K00981.1|NEUQA2MUD N.crassa qa-2 gene mutant 158-106, 5' flank
          Length = 505

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 183 gcagaagcagaaaacaaacca 203
           |||||||||||||||||||||
Sbjct: 208 gcagaagcagaaaacaaacca 228

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>dbj|AB029459.1| Salix gilgiana SgPG3 mRNA for polygalacturonase, complete cds
          Length = 1397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 465  ttggtttcttcattcataggc 485
            |||||||||||||||||||||
Sbjct: 1285 ttggtttcttcattcataggc 1305

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>ref|NM_116481.2| Arabidopsis thaliana ATP binding / ATPase/ nucleoside-triphosphatase/
            nucleotide binding AT4G02480 mRNA, complete cds
          Length = 4287

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Plus

                                                                        
Query: 327  tggaacgagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatg 386
            ||||||||||| || || ||||| ||||| || ||||||||  |  | ||||||||||||
Sbjct: 3902 tggaacgagctgtatggtgaaggaggatcgaggaagaagacgtcgttgagctacttcatg 3961

               
Query: 387  tag 389
            |||
Sbjct: 3962 tag 3964

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>gb|CP000109.1| Thiomicrospira crunogena XCL-2, complete genome
          Length = 2427734

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 293     atctgattcgacaaatatga 312
               ||||||||||||||||||||
Sbjct: 1316363 atctgattcgacaaatatga 1316382

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>gb|BT016450.1| Zea mays clone Contig283 mRNA sequence
          Length = 1470

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 cttgttcagtggaacgagct 337
           ||||||||||||||||||||
Sbjct: 755 cttgttcagtggaacgagct 736

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>gb|AC135431.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0683B12,
             complete sequence
          Length = 187523

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 186   gaagcagaaaacaaaccatt 205
             ||||||||||||||||||||
Sbjct: 17564 gaagcagaaaacaaaccatt 17583

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>gb|AC165174.2| Zea mays clone ZMMBBb-127F19, complete sequence
          Length = 187659

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    acaaagagaagaaggagaga 176
              ||||||||||||||||||||
Sbjct: 108620 acaaagagaagaaggagaga 108601

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>gb|AC134303.2| Homo sapiens chromosome 19 clone LLNLR-265H6, complete sequence
          Length = 42236

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   ttgttctgtaatgccagttc 520
             ||||||||||||||||||||
Sbjct: 30209 ttgttctgtaatgccagttc 30228

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>emb|Z81491.1|CED1086 Caenorhabditis elegans Cosmid D1086, complete sequence
          Length = 41270

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 490   ttttgagtcaattgttctgt 509
             ||||||||||||||||||||
Sbjct: 31791 ttttgagtcaattgttctgt 31810

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>gb|AC116129.13| Mus musculus chromosome 1, clone RP23-98F11, complete sequence
          Length = 216320

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 464   gttggtttcttcattcatag 483
             ||||||||||||||||||||
Sbjct: 58389 gttggtttcttcattcatag 58408

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>gb|AY090948.1| Arabidopsis thaliana unknown protein (At4g02480) mRNA, complete cds
          Length = 4184

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Plus

                                                                        
Query: 327  tggaacgagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatg 386
            ||||||||||| || || ||||| ||||| || ||||||||  |  | ||||||||||||
Sbjct: 3864 tggaacgagctgtatggtgaaggaggatcgaggaagaagacgtcgttgagctacttcatg 3923

               
Query: 387  tag 389
            |||
Sbjct: 3924 tag 3926

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>emb|X14603.1|NCQA Neurospora crassa qa gene cluster
          Length = 18120

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 183  gcagaagcagaaaacaaacc 202
            ||||||||||||||||||||
Sbjct: 2557 gcagaagcagaaaacaaacc 2576

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>emb|AL161494.2|ATCHRIV6 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 6
          Length = 194892

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Minus

                                                                          
Query: 327    tggaacgagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatg 386
              ||||||||||| || || ||||| ||||| || ||||||||  |  | ||||||||||||
Sbjct: 117794 tggaacgagctgtatggtgaaggaggatcgaggaagaagacgtcgttgagctacttcatg 117735

                 
Query: 387    tag 389
              |||
Sbjct: 117734 tag 117732

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>emb|AL732581.5| Mouse DNA sequence from clone RP24-262H17 on chromosome 4, complete
             sequence
          Length = 137493

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   atgtgcaagtatatcatctg 297
             ||||||||||||||||||||
Sbjct: 91547 atgtgcaagtatatcatctg 91528

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>gb|AC011499.5| Homo sapiens chromosome 19 clone CTB-54O9, complete sequence
          Length = 199776

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 501   ttgttctgtaatgccagttc 520
             ||||||||||||||||||||
Sbjct: 15412 ttgttctgtaatgccagttc 15431

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>gb|AC108101.2| Homo sapiens chromosome 5 clone RP11-125H10, complete sequence
          Length = 144841

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   agcagaagcagaaaacaaac 201
             ||||||||||||||||||||
Sbjct: 92451 agcagaagcagaaaacaaac 92432

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>gb|AC092280.2| Homo sapiens chromosome 5 clone CTD-2028M21, complete sequence
          Length = 101502

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   agcagaagcagaaaacaaac 201
             ||||||||||||||||||||
Sbjct: 86975 agcagaagcagaaaacaaac 86956

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>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence
          Length = 167272

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    acaaagagaagaaggagaga 176
              ||||||||||||||||||||
Sbjct: 150497 acaaagagaagaaggagaga 150478

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 186     gaagcagaaaacaaaccatt 205
               ||||||||||||||||||||
Sbjct: 4922979 gaagcagaaaacaaaccatt 4922998

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>gb|DQ002945.1| Dyacopterus spadiceus isolate DS10 12S ribosomal RNA, partial
           sequence; tRNA-Val gene, complete sequence; and 16S
           ribosomal RNA, partial sequence; mitochondrial
          Length = 1296

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gaaatccttgacaaagagaa 166
           ||||||||||||||||||||
Sbjct: 754 gaaatccttgacaaagagaa 773

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>gb|AC093320.24| Mus musculus strain C57BL/6J chromosome 1 clone rp23-45n11, complete
             sequence
          Length = 245536

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 464   gttggtttcttcattcatag 483
             ||||||||||||||||||||
Sbjct: 72606 gttggtttcttcattcatag 72587

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>gb|AF069298.1|T14P8 Arabidopsis thaliana BAC T14P8
          Length = 94536

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 52/63 (82%)
 Strand = Plus / Plus

                                                                         
Query: 327   tggaacgagctttacggngaaggcggatctagaaagaagacacctctaagctacttcatg 386
             ||||||||||| || || ||||| ||||| || ||||||||  |  | ||||||||||||
Sbjct: 28820 tggaacgagctgtatggtgaaggaggatcgaggaagaagacgtcgttgagctacttcatg 28879

                
Query: 387   tag 389
             |||
Sbjct: 28880 tag 28882

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>emb|BX648568.1|HSM808716 Homo sapiens mRNA; cDNA DKFZp779L0366 (from clone DKFZp779L0366)
          Length = 4765

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 157  acaaagagaagaaggagaga 176
            ||||||||||||||||||||
Sbjct: 2084 acaaagagaagaaggagaga 2103

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>gb|AC006229.17|AC006229 Homo sapiens chromosome 4 clone C0011D19, complete sequence
          Length = 186373

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    acaaagagaagaaggagaga 176
              ||||||||||||||||||||
Sbjct: 158204 acaaagagaagaaggagaga 158223

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>gb|AY555142.1| Zea mays BAC clone c573F08, complete sequence
          Length = 181627

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    acaaagagaagaaggagaga 176
              ||||||||||||||||||||
Sbjct: 179705 acaaagagaagaaggagaga 179686



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    acaaagagaagaaggagaga 176
              ||||||||||||||||||||
Sbjct: 151476 acaaagagaagaaggagaga 151495

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>gb|AY104413.1| Zea mays PCO098503 mRNA sequence
          Length = 1571

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 318 cttgttcagtggaacgagct 337
           ||||||||||||||||||||
Sbjct: 903 cttgttcagtggaacgagct 884

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>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence
          Length = 339089

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 157    acaaagagaagaaggagaga 176
              ||||||||||||||||||||
Sbjct: 196586 acaaagagaagaaggagaga 196605

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>gb|AC127589.4| Mus musculus BAC clone RP23-134K6 from 5, complete sequence
          Length = 209121

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 146   ggaaatccttgacaaagaga 165
             ||||||||||||||||||||
Sbjct: 38818 ggaaatccttgacaaagaga 38837

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>gb|K00977.1|NEUQA2WT N.crassa wild type qa-2 gene, 5' flank
          Length = 559

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcagaagcagaaaacaaacc 202
           ||||||||||||||||||||
Sbjct: 251 gcagaagcagaaaacaaacc 270

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>gb|K00982.1|NEUQA2MUE N.crassa qa-2 gene mutant 158-33, 5' flank
          Length = 505

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcagaagcagaaaacaaacc 202
           ||||||||||||||||||||
Sbjct: 208 gcagaagcagaaaacaaacc 227

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>gb|K00980.1|NEUQA2MUC N.crassa qa-2 gene mutants 162-4 and 162-5, 5' flank
          Length = 503

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcagaagcagaaaacaaacc 202
           ||||||||||||||||||||
Sbjct: 208 gcagaagcagaaaacaaacc 227

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>gb|K00979.1|NEUQA2MUB N.crassa qa-2 gene mutant 158-6, 5' flank
          Length = 573

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcagaagcagaaaacaaacc 202
           ||||||||||||||||||||
Sbjct: 208 gcagaagcagaaaacaaacc 227

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>gb|K00978.1|NEUQA2MUA N.crassa qa-2 gene mutant 158-99, 5' flank
          Length = 589

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 183 gcagaagcagaaaacaaacc 202
           ||||||||||||||||||||
Sbjct: 208 gcagaagcagaaaacaaacc 227


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,723,278
Number of Sequences: 3902068
Number of extensions: 4723278
Number of successful extensions: 89510
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 89248
Number of HSP's gapped (non-prelim): 257
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result