| Clone Name | basd13m10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | G168_PARPR (P17053) G surface protein, allelic form 168 precursor | 31 | 2.0 | 2 | ZF106_MOUSE (O88466) Zinc finger protein 106 (Zfp-106) (Zinc fin... | 29 | 7.7 | 3 | FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ... | 29 | 7.7 | 4 | JAK2_HUMAN (O60674) Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (... | 29 | 10.0 |
|---|
>G168_PARPR (P17053) G surface protein, allelic form 168 precursor| Length = 2704 Score = 31.2 bits (69), Expect = 2.0 Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 2/84 (2%) Frame = +2 Query: 86 CSVGNITGLGAGNICSITMSSSNCTQHTSHQIISFQGIQEGFLQWKYPTKQYCILFS--C 259 CS +G GA T +S C HT + G FL W T+Q C L S C Sbjct: 2578 CSWTAASGTGA------TAVASKCATHTCATNQATNGACTRFLNWDKKTQQVCTLVSGAC 2631 Query: 260 KKNNSK*ESINTTRFFGGFLQCWH 331 + S N G+ W+ Sbjct: 2632 TATDPSTLSSNDCFLVSGYTYTWN 2655
>ZF106_MOUSE (O88466) Zinc finger protein 106 (Zfp-106) (Zinc finger protein 474)| (H3a minor histocompatibility antigen) (Son of insulin receptor mutant) Length = 1888 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 5/55 (9%) Frame = +2 Query: 170 SHQIISFQGIQEGFLQWKYPTKQYCILFSCKKNNSK*ESINTTR-----FFGGFL 319 +H+I QG+QE + ++P + C L S ++ NS+ ++ T FF GFL Sbjct: 1122 THRIQILQGLQETYEPPEHPDQAPCSLISREQRNSRSQTSFETALLPAPFFPGFL 1176
>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (Protein archipelago) Length = 1326 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = +2 Query: 44 CTTGKIYIGISHHLCSVGNITGLGAGNICSITMSSSNCTQHTSHQIISFQGIQEGFLQWK 223 C+TG +G S S +G GA N C +S T + Q+ + QE FL Sbjct: 560 CSTGSACLGDSQASTSASTSSGAGASNRCQYATTS---TTKAARQVNASAQTQERFLTRS 616 Query: 224 YP 229 P Sbjct: 617 NP 618
>JAK2_HUMAN (O60674) Tyrosine-protein kinase JAK2 (EC 2.7.10.2) (Janus kinase| 2) (JAK-2) Length = 1132 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 23/108 (21%) Frame = +3 Query: 126 SVQSQCHHPIAHNILVIKLSVS-------------REYKRVFFNGNIQPSNIAFFSHAKR 266 ++QS CH PI+ + + KL + +++ + F ++ N+ + H Sbjct: 395 NIQSNCHGPISMDFAISKLKKAGNQTGLYVLRCSPKDFNKYFLTFAVERENVIEYKHCLI 454 Query: 267 TT----------VNKNQSTQQDFLGAFYSAGTIRAKMDKGLCLPFTQC 380 T KN S+ +D L Y T+R+ + FT+C Sbjct: 455 TKNENEEYNLSGTKKNFSSLKDLLNC-YQMETVRS---DNIIFQFTKC 498 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,371,009 Number of Sequences: 219361 Number of extensions: 1836397 Number of successful extensions: 4354 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4354 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)