ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd13m10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
2dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
3dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
4ref|NM_189943.1| Oryza sativa (japonica cultivar-group), predic... 46 0.12
5gb|AY187678.1| Oryza sativa (japonica cultivar-group) putative s... 46 0.12
6dbj|AB059401.1| Oryza sativa Os SBP mRNA for putative selenium b... 46 0.12
7dbj|AK071710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.12
8gb|U59296.1|RNU59296 Rattus norvegicus chromosome 10 microsatell... 46 0.12
9gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 42 1.9
10gb|AC087606.2| Trypanosoma brucei chromosome 4 clone RPCI93-4J6,... 42 1.9
11gb|AC080131.9| Trypanosoma brucei chromosome 4 clone RPCI93-2H8,... 42 1.9
12dbj|AK096068.1| Homo sapiens cDNA FLJ38749 fis, clone KIDNE2012453 42 1.9
13gb|AC009153.10| Homo sapiens chromosome 16 clone RP11-572F4, com... 42 1.9
14emb|BX511132.4| Zebrafish DNA sequence from clone RP71-57D19 in ... 42 1.9
15gb|DQ355971.1| Homo sapiens CDC42 binding protein kinase beta (D... 42 1.9
16emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chro... 42 1.9
17emb|AL133455.4|CNS01DV6 Human chromosome 14 DNA sequence BAC C-2... 42 1.9
18ref|NM_103988.2| Arabidopsis thaliana unknown protein AT1G51100 ... 40 7.4
19gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete... 40 7.4
20gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome... 40 7.4
21emb|CR749762.6| Zebrafish DNA sequence from clone RP71-17I16 in ... 40 7.4
22gb|AF361884.1| Schistosoma mansoni high voltage-activated calciu... 40 7.4
23gb|AE014174.1| Mus musculus piebald deletion region section 2 of... 40 7.4
24gb|AC025035.15| Homo sapiens 12 BAC RP11-121E16 (Roswell Park Ca... 40 7.4
25gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell ... 40 7.4
26gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, co... 40 7.4
27dbj|AK137402.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 7.4
28gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complet... 40 7.4
29gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome... 40 7.4
30emb|BX511158.5| Zebrafish DNA sequence from clone DKEY-28B4 in l... 40 7.4
31emb|BX817632.1|CNS0AB1U Arabidopsis thaliana Full-length cDNA Co... 40 7.4
32gb|AC079828.4|AC079828 Arabidopsis thaliana chromosome 1 BAC F23... 40 7.4
33gb|AC104697.2| Homo sapiens BAC clone RP11-454B3 from 2, complet... 40 7.4
34gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell... 40 7.4
35gb|AY087073.1| Arabidopsis thaliana clone 31356 mRNA, complete s... 40 7.4
36gb|AC153859.6| Mus musculus 10 BAC RP23-135F12 (Roswell Park Can... 40 7.4
37emb|CT573010.12| Mouse DNA sequence from clone RP23-231E24 on ch... 40 7.4
38emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in ... 40 7.4
39gb|AC006390.8|AC006390 Homo sapiens chromosome 4 clone C0106M04 ... 40 7.4
40gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 ... 40 7.4
41emb|CR354607.12| Zebrafish DNA sequence from clone CH211-278G15 ... 40 7.4
42dbj|AP000919.6| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 7.4
43gb|AC102576.7| Mus musculus chromosome 18, clone RP23-243N2, com... 40 7.4
44emb|CR848755.12| Zebrafish DNA sequence from clone DKEY-85M3 in ... 40 7.4
45emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on ch... 40 7.4
46emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chro... 40 7.4 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                                 
Query: 516      caggtactggaatccacaagccggattacctgg 548
                |||||||||||||  ||||||||||||||||||
Sbjct: 39942299 caggtactggaattaacaagccggattacctgg 39942331
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>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0413C03
          Length = 162161

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 516   caggtactggaatccacaagccggattacctgg 548
             |||||||||||||  ||||||||||||||||||
Sbjct: 33750 caggtactggaattaacaagccggattacctgg 33782
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>dbj|AP003433.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0004D12
          Length = 138136

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 516    caggtactggaatccacaagccggattacctgg 548
              |||||||||||||  ||||||||||||||||||
Sbjct: 123007 caggtactggaattaacaagccggattacctgg 123039
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>ref|NM_189943.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1449

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 518 ggtactggaatccacaagccggattacctgg 548
           |||||||||||  ||||||||||||||||||
Sbjct: 127 ggtactggaattaacaagccggattacctgg 157
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>gb|AY187678.1| Oryza sativa (japonica cultivar-group) putative selenium binding
           protein (SBP) mRNA, complete cds
          Length = 1768

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 518 ggtactggaatccacaagccggattacctgg 548
           |||||||||||  ||||||||||||||||||
Sbjct: 221 ggtactggaattaacaagccggattacctgg 251
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>dbj|AB059401.1| Oryza sativa Os SBP mRNA for putative selenium binding protein,
           complete cds
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 518 ggtactggaatccacaagccggattacctgg 548
           |||||||||||  ||||||||||||||||||
Sbjct: 52  ggtactggaattaacaagccggattacctgg 82
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>dbj|AK071710.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023110L07, full
           insert sequence
          Length = 1793

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 518 ggtactggaatccacaagccggattacctgg 548
           |||||||||||  ||||||||||||||||||
Sbjct: 239 ggtactggaattaacaagccggattacctgg 269
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>gb|U59296.1|RNU59296 Rattus norvegicus chromosome 10 microsatellite sequence D10Mco31
          Length = 493

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 294 caacaagattttttgggggcttt 316
           |||||||||||||||||||||||
Sbjct: 391 caacaagattttttgggggcttt 369
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>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 260    aaaaagaacaacagtaaataa 280
              |||||||||||||||||||||
Sbjct: 733724 aaaaagaacaacagtaaataa 733704
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>gb|AC087606.2| Trypanosoma brucei chromosome 4 clone RPCI93-4J6, complete sequence
          Length = 37931

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 260   aaaaagaacaacagtaaataa 280
             |||||||||||||||||||||
Sbjct: 32434 aaaaagaacaacagtaaataa 32414
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>gb|AC080131.9| Trypanosoma brucei chromosome 4 clone RPCI93-2H8, complete sequence
          Length = 163689

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 260    aaaaagaacaacagtaaataa 280
              |||||||||||||||||||||
Sbjct: 148855 aaaaagaacaacagtaaataa 148875
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>dbj|AK096068.1| Homo sapiens cDNA FLJ38749 fis, clone KIDNE2012453
          Length = 2692

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 267  acaacagtaaataagaatcaa 287
            |||||||||||||||||||||
Sbjct: 1996 acaacagtaaataagaatcaa 2016
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>gb|AC009153.10| Homo sapiens chromosome 16 clone RP11-572F4, complete sequence
          Length = 177479

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 267   acaacagtaaataagaatcaa 287
             |||||||||||||||||||||
Sbjct: 86616 acaacagtaaataagaatcaa 86596
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>emb|BX511132.4| Zebrafish DNA sequence from clone RP71-57D19 in linkage group 3,
             complete sequence
          Length = 162087

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 289   caacacaacaagattttttgggggc 313
             ||||||||||||||||||| |||||
Sbjct: 42395 caacacaacaagatttttttggggc 42419
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>gb|DQ355971.1| Homo sapiens CDC42 binding protein kinase beta (DMPK-like) (CDC42BPB)
             gene, complete cds
          Length = 127833

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 242   tgcattcttttctcatgcaaaaaga 266
             ||||||||||||||||| |||||||
Sbjct: 64710 tgcattcttttctcatgaaaaaaga 64686
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>emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chromosome 4, complete
              sequence
          Length = 233270

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    gttttcttcaatggaaatatc 227
              |||||||||||||||||||||
Sbjct: 171986 gttttcttcaatggaaatatc 172006
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>emb|AL133455.4|CNS01DV6 Human chromosome 14 DNA sequence BAC C-2538G10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 137833

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 242   tgcattcttttctcatgcaaaaaga 266
             ||||||||||||||||| |||||||
Sbjct: 71064 tgcattcttttctcatgaaaaaaga 71088
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>ref|NM_103988.2| Arabidopsis thaliana unknown protein AT1G51100 mRNA, complete cds
          Length = 837

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 gaatcaatcaacacaacaag 300
           ||||||||||||||||||||
Sbjct: 203 gaatcaatcaacacaacaag 222
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>gb|AC122925.3| Mus musculus BAC clone RP23-9O19 from 1, complete sequence
          Length = 256751

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     aacacatcactgtaaaatat 40
              ||||||||||||||||||||
Sbjct: 197601 aacacatcactgtaaaatat 197620
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>gb|AC161448.4| Mus musculus BAC clone RP24-149K9 from chromosome 6, complete sequence
          Length = 190414

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    catcactgtaaaatatatct 44
             ||||||||||||||||||||
Sbjct: 82714 catcactgtaaaatatatct 82695
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>emb|CR749762.6| Zebrafish DNA sequence from clone RP71-17I16 in linkage group 23,
             complete sequence
          Length = 174955

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   aacagtaaataagaatcaat 288
             ||||||||||||||||||||
Sbjct: 99082 aacagtaaataagaatcaat 99063
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>gb|AF361884.1| Schistosoma mansoni high voltage-activated calcium channel Cav1 mRNA,
            complete cds
          Length = 5555

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 205  gggttttcttcaatggaaat 224
            ||||||||||||||||||||
Sbjct: 4061 gggttttcttcaatggaaat 4042
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>gb|AE014174.1| Mus musculus piebald deletion region section 2 of 11 of the complete
              sequence
          Length = 400029

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 275    aaataagaatcaatcaacacaaca 298
              |||| |||||||||||||||||||
Sbjct: 339808 aaatgagaatcaatcaacacaaca 339831
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>gb|AC025035.15| Homo sapiens 12 BAC RP11-121E16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 165440

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   ggctttttacagtgctggca 330
             ||||||||||||||||||||
Sbjct: 48829 ggctttttacagtgctggca 48848
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>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 159970

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    agtcatcaaattatcagttt 189
              ||||||||||||||||||||
Sbjct: 114276 agtcatcaaattatcagttt 114295
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>gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, complete sequence
          Length = 212404

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 25    catcactgtaaaatatatct 44
             ||||||||||||||||||||
Sbjct: 20930 catcactgtaaaatatatct 20949
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>dbj|AK137402.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630046A01
            product:O-sialoglycoprotein endopeptidase-like 1, full
            insert sequence
          Length = 3897

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   aacacatcactgtaaaatat 40
            ||||||||||||||||||||
Sbjct: 2359 aacacatcactgtaaaatat 2340
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>gb|AC004129.2| Homo sapiens BAC clone CTB-136N17 from 7, complete sequence
          Length = 162701

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   gctttttacagtgctggcac 331
             ||||||||||||||||||||
Sbjct: 63079 gctttttacagtgctggcac 63060
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>gb|AC153650.4| Mus musculus BAC clone RP24-93I18 from chromosome 1, complete sequence
          Length = 199753

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aacacatcactgtaaaatat 40
             ||||||||||||||||||||
Sbjct: 99172 aacacatcactgtaaaatat 99191
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>emb|BX511158.5| Zebrafish DNA sequence from clone DKEY-28B4 in linkage group 1, complete
              sequence
          Length = 198706

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 28     cactgtaaaatatatctgtac-aacaggcaaa 58
              ||||||||||||| ||||||| ||||||||||
Sbjct: 176093 cactgtaaaatatctctgtacaaacaggcaaa 176062
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>emb|BX817632.1|CNS0AB1U Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL34ZA12 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 815

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 gaatcaatcaacacaacaag 300
           ||||||||||||||||||||
Sbjct: 180 gaatcaatcaacacaacaag 199
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>gb|AC079828.4|AC079828 Arabidopsis thaliana chromosome 1 BAC F23H24 genomic sequence, complete
             sequence
          Length = 45337

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   gaatcaatcaacacaacaag 300
             ||||||||||||||||||||
Sbjct: 20830 gaatcaatcaacacaacaag 20811
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>gb|AC104697.2| Homo sapiens BAC clone RP11-454B3 from 2, complete sequence
          Length = 159797

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   ttttcttcaatggaaatatc 227
             ||||||||||||||||||||
Sbjct: 97600 ttttcttcaatggaaatatc 97581
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>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 184175

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   agtcatcaaattatcagttt 189
             ||||||||||||||||||||
Sbjct: 55781 agtcatcaaattatcagttt 55800
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>gb|AY087073.1| Arabidopsis thaliana clone 31356 mRNA, complete sequence
          Length = 831

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 281 gaatcaatcaacacaacaag 300
           ||||||||||||||||||||
Sbjct: 203 gaatcaatcaacacaacaag 222
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>gb|AC153859.6| Mus musculus 10 BAC RP23-135F12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 222182

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 242    tgcattcttttctcatgcaa 261
              ||||||||||||||||||||
Sbjct: 141108 tgcattcttttctcatgcaa 141089
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>emb|CT573010.12| Mouse DNA sequence from clone RP23-231E24 on chromosome 14, complete
            sequence
          Length = 13944

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 275  aaataagaatcaatcaacacaaca 298
            |||| |||||||||||||||||||
Sbjct: 5389 aaatgagaatcaatcaacacaaca 5412
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>emb|BX511244.8| Zebrafish DNA sequence from clone DKEY-185L3 in linkage group 20,
             complete sequence
          Length = 116609

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 234   agcaatattgcattcttttctcat 257
             |||||||||||| |||||||||||
Sbjct: 63638 agcaatattgcaatcttttctcat 63661
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>gb|AC006390.8|AC006390 Homo sapiens chromosome 4 clone C0106M04 map 4p16, complete sequence
          Length = 183876

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 221   aaatatccaaccaagcaata 240
             ||||||||||||||||||||
Sbjct: 63892 aaatatccaaccaagcaata 63873
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>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete
             sequence
          Length = 318665

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 170   agtcatcaaattatcagttt 189
             ||||||||||||||||||||
Sbjct: 82670 agtcatcaaattatcagttt 82689
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>emb|CR354607.12| Zebrafish DNA sequence from clone CH211-278G15 in linkage group 24,
             complete sequence
          Length = 180632

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cactgtaaaatatatctgta 47
             ||||||||||||||||||||
Sbjct: 20629 cactgtaaaatatatctgta 20648
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>dbj|AP000919.6| Homo sapiens genomic DNA, chromosome 18 clone:RP11-737O24, complete
             sequence
          Length = 184440

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 352   agggactctgtctgcctttt 371
             ||||||||||||||||||||
Sbjct: 67510 agggactctgtctgcctttt 67491
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>gb|AC102576.7| Mus musculus chromosome 18, clone RP23-243N2, complete sequence
          Length = 162186

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 291   acacaacaagattttttggg 310
             ||||||||||||||||||||
Sbjct: 95187 acacaacaagattttttggg 95206
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>emb|CR848755.12| Zebrafish DNA sequence from clone DKEY-85M3 in linkage group 16,
             complete sequence
          Length = 81968

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 436   gttttaaaccctggccatgg 455
             ||||||||||||||||||||
Sbjct: 18055 gttttaaaccctggccatgg 18036
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>emb|AL611969.15| Mouse DNA sequence from clone RP23-392K10 on chromosome 4, complete
              sequence
          Length = 174305

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    tggacaagggactctgtctg 365
              ||||||||||||||||||||
Sbjct: 151593 tggacaagggactctgtctg 151612
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>emb|AL671672.4| Mouse DNA sequence from clone RP23-461E2 on chromosome 4, complete
             sequence
          Length = 191255

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   aacaagattttttgggggct 314
             ||||||||||||||||||||
Sbjct: 56310 aacaagattttttgggggct 56329


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,988,311
Number of Sequences: 3902068
Number of extensions: 5988311
Number of successful extensions: 117286
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 117154
Number of HSP's gapped (non-prelim): 133
length of query: 548
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 525
effective length of database: 17,143,297,704
effective search space: 9000231294600
effective search space used: 9000231294600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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