ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd14b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 88 4e-14
3emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial se... 88 4e-14
4ref|NM_103713.2| Arabidopsis thaliana unknown protein AT1G48170 ... 72 2e-09
5gb|BT014700.1| Arabidopsis thaliana At1g48170.1 mRNA sequence 72 2e-09
6gb|AY133765.1| Arabidopsis thaliana clone U18923 unknown protein... 72 2e-09
7gb|AY070372.1| Arabidopsis thaliana unknown protein (At1g48170) ... 72 2e-09
8emb|BX817965.1|CNS0AB6F Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
9emb|BX817589.1|CNS0AB4M Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
10gb|BT005744.1| Arabidopsis thaliana clone RAFL16-03-B15 (R50049) 72 2e-09
11gb|AY086896.1| Arabidopsis thaliana clone 29199 mRNA, complete s... 72 2e-09
12gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis thaliana... 72 2e-09
13gb|AC150917.2| Bos taurus BAC CH240-430L1 (Children's Hospital ... 44 0.55
14gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome ... 44 0.55
15gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, co... 44 0.55
16ref|NM_123367.1| Arabidopsis thaliana structural constituent of ... 42 2.2
17gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, co... 42 2.2
18gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, c... 42 2.2
19gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 42 2.2
20gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, co... 42 2.2
21gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, com... 42 2.2
22gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete s... 42 2.2
23gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, comp... 42 2.2
24gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, co... 42 2.2
25gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome... 42 2.2
26gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete... 42 2.2
27gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, com... 42 2.2
28gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, comp... 42 2.2
29gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, co... 42 2.2
30gb|BT010520.1| Arabidopsis thaliana At5g40040 gene, complete cds 42 2.2
31gb|CP000316.1| Polaromonas sp. JS666, complete genome 42 2.2
32gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 2.2
33emb|AJ404229.1|RSP404229 Rhodobacter sphaeroides McpJ gene for p... 42 2.2
34gb|DP000004.1| Lemur catta target 1 genomic scaffold 42 2.2
35gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold 42 2.2
36gb|AC019254.12| Homo sapiens chromosome 15, clone RP11-424I19, c... 42 2.2
37gb|AC150729.3| Lemur catta clone LB2-190B3, complete sequence 42 2.2
38dbj|AK176151.1| Arabidopsis thaliana mRNA for acidic ribosomal p... 42 2.2
39dbj|AK175884.1| Arabidopsis thaliana mRNA for acidic ribosomal p... 42 2.2
40dbj|AK175633.1| Arabidopsis thaliana mRNA for acidic ribosomal p... 42 2.2
41dbj|AK175632.1| Arabidopsis thaliana mRNA for acidic ribosomal p... 42 2.2
42dbj|AB022222.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 2.2
43gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, c... 42 2.2
44gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence 42 2.2
45gb|AC003664.1|AC003664 Homo sapiens chromosome 17, clone hCIT54K... 42 2.2
46emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on ch... 42 2.2
47gb|DP000022.1| Microcebus murinus target 1 genomic scaffold 42 2.2
48emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chr... 42 2.2
49gb|AC160027.16| Mus musculus 10 BAC RP23-192N23 (Roswell Park Ca... 40 8.6
50ref|XM_465928.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
51ref|XM_465927.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.6
52gb|AF039037.2| Caenorhabditis elegans cosmid R02C2, complete seq... 40 8.6
53gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosom... 40 8.6
54ref|XM_752220.1| Ustilago maydis 521 hypothetical protein (UM011... 40 8.6
55ref|XM_754492.1| Ustilago maydis 521 hypothetical protein (UM034... 40 8.6
56gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complet... 40 8.6
57emb|AL136366.24| Human DNA sequence from clone RP11-413C16 on ch... 40 8.6
58emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 gen... 40 8.6
59gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete... 40 8.6
60gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, compl... 40 8.6
61ref|XM_504931.1| Yarrowia lipolytica CLIB122, YALI0F03047g predi... 40 8.6
62emb|AL391001.12| Human DNA sequence from clone RP11-477H21 on ch... 40 8.6
63emb|AL390882.12| Human DNA sequence from clone RP11-113D19 on ch... 40 8.6
64emb|AL136092.8| Human DNA sequence from clone RP3-496G1 on chrom... 40 8.6
65emb|AL121872.12|HSB348B13 Human DNA sequence from clone RP13-348... 40 8.6
66emb|AL117329.8|HSBA191L9 Human DNA sequence from clone RP11-191L... 40 8.6
67emb|AL035697.19|HS45F6 Human DNA sequence from clone RP1-45F6 on... 40 8.6
68ref|XM_966662.1| PREDICTED: Tribolium castaneum similar to Synap... 40 8.6
69gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, c... 40 8.6
70emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on ch... 40 8.6
71emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4,... 40 8.6
72emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encep... 40 8.6
73emb|CR937025.1|PT027O15 Pan troglodytes chromosome 11 BAC PTB-02... 40 8.6
74gb|AC105278.2| Homo sapiens chromosome 1 clone RP5-1098H21, comp... 40 8.6
75gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, c... 40 8.6
76gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 8.6
77emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chr... 40 8.6
78gb|AE005757.1| Caulobacter crescentus CB15 section 83 of 359 of ... 40 8.6
79gb|AC104419.3| Homo sapiens chromosome 8, clone RP11-134O21, com... 40 8.6
80gb|AC093579.2| Homo sapiens chromosome 1 clone RP11-78O9, comple... 40 8.6
81dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
82dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
83gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y... 40 8.6
84gb|AC079892.4| Homo sapiens BAC clone RP11-240F15 from 2, comple... 40 8.6
85gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, compl... 40 8.6
86gb|AC011084.17| Homo sapiens chromosome 11, clone RP11-21L19, co... 40 8.6
87gb|AC116118.16| Mus musculus chromosome 16, clone RP23-73P19, co... 40 8.6
88dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
89dbj|AK073949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
90dbj|AK065137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.6
91emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 8.6
92gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, com... 40 8.6
93emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on ch... 40 8.6
94emb|AL845460.9| Mouse DNA sequence from clone RP23-453H2 on chro... 40 8.6
95gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosom... 40 8.6
96gb|AC134867.3| Mus musculus BAC clone RP23-18L24 from 10, comple... 40 8.6
97emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 8.6
98dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 8.6
99emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chr... 40 8.6 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                           
Query: 569     gggtgatggagtgagtgtcacatctgtacttggaggaacatctgataacactggatcaag 628
               |||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |
Sbjct: 4200979 gggtaatggagtgagtgtcacctctgtactaggaggaacatctgataacactggttcagg 4201038

                   
Query: 629     catg 632
               ||||
Sbjct: 4201039 catg 4201042



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                           
Query: 393     tcttcaggtgatctgtcttctgaaggcggggcgcaggtcacctgtttcagtgaggacctg 452
               |||||||||||||  || ||||| || || | |||||| || || |||| ||||||||||
Sbjct: 4199645 tcttcaggtgatccatcatctgagggaggtgtgcaggttacttgcttcactgaggacctg 4199704

                                                
Query: 453     cacgacgtcacgctccatttccagatcataagg 485
               || || || |  |||||||| ||||| ||||||
Sbjct: 4199705 catgatgttatcctccattttcagataataagg 4199737
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Plus

                                                                           
Query: 569     gggtgatggagtgagtgtcacatctgtacttggaggaacatctgataacactggatcaag 628
               |||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |
Sbjct: 4200966 gggtaatggagtgagtgtcacctctgtactaggaggaacatctgataacactggttcagg 4201025

                   
Query: 629     catg 632
               ||||
Sbjct: 4201026 catg 4201029



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 75/93 (80%)
 Strand = Plus / Plus

                                                                           
Query: 393     tcttcaggtgatctgtcttctgaaggcggggcgcaggtcacctgtttcagtgaggacctg 452
               |||||||||||||  || ||||| || || | |||||| || || |||| ||||||||||
Sbjct: 4199632 tcttcaggtgatccatcatctgagggaggtgtgcaggttacttgcttcactgaggacctg 4199691

                                                
Query: 453     cacgacgtcacgctccatttccagatcataagg 485
               || || || |  |||||||| ||||| ||||||
Sbjct: 4199692 catgatgttatcctccattttcagataataagg 4199724
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>emb|AL954158.4|CNS08CCW Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBb0089D09
             of library OSJNBb from chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 104999

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 59/64 (92%)
 Strand = Plus / Minus

                                                                         
Query: 569   gggtgatggagtgagtgtcacatctgtacttggaggaacatctgataacactggatcaag 628
             |||| |||||||||||||||| |||||||| ||||||||||||||||||||||| ||| |
Sbjct: 82804 gggtaatggagtgagtgtcacctctgtactaggaggaacatctgataacactggttcagg 82745

                 
Query: 629   catg 632
             ||||
Sbjct: 82744 catg 82741



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 75/93 (80%)
 Strand = Plus / Minus

                                                                         
Query: 393   tcttcaggtgatctgtcttctgaaggcggggcgcaggtcacctgtttcagtgaggacctg 452
             |||||||||||||  || ||||| || || | |||||| || || |||| ||||||||||
Sbjct: 84138 tcttcaggtgatccatcatctgagggaggtgtgcaggttacttgcttcactgaggacctg 84079

                                              
Query: 453   cacgacgtcacgctccatttccagatcataagg 485
             || || || |  |||||||| ||||| ||||||
Sbjct: 84078 catgatgttatcctccattttcagataataagg 84046
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>ref|NM_103713.2| Arabidopsis thaliana unknown protein AT1G48170 mRNA, complete cds
          Length = 944

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 276 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 323
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>gb|BT014700.1| Arabidopsis thaliana At1g48170.1 mRNA sequence
          Length = 459

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 249 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 296
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>gb|AY133765.1| Arabidopsis thaliana clone U18923 unknown protein (At1g48170) mRNA,
           complete cds
          Length = 493

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 252 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 299
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>gb|AY070372.1| Arabidopsis thaliana unknown protein (At1g48170) mRNA, complete cds
          Length = 959

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 275 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 322
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>emb|BX817965.1|CNS0AB6F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL53ZG08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 822

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 251 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 298
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>emb|BX817589.1|CNS0AB4M Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 569

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 250 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 297
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>gb|BT005744.1| Arabidopsis thaliana clone RAFL16-03-B15 (R50049)
          Length = 2771

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 276 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 323
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>gb|AY086896.1| Arabidopsis thaliana clone 29199 mRNA, complete sequence
          Length = 589

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Plus

                                                           
Query: 578 agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
           ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 276 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 323
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>gb|AC023673.3|AC023673 Genomic sequence for Arabidopsis thaliana BAC F21D18 from chromosome I,
             complete sequence
          Length = 109367

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 45/48 (93%)
 Strand = Plus / Minus

                                                             
Query: 578   agtgagtgtcacatctgtacttggaggaacatctgataacactggatc 625
             ||||||||| ||||| |||||||| |||||||||||||||||||||||
Sbjct: 32217 agtgagtgttacatcggtacttggtggaacatctgataacactggatc 32170
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>gb|AC150917.2| Bos taurus  BAC CH240-430L1 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186516

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 13     ctttctcctcttccttcttctg 34
              ||||||||||||||||||||||
Sbjct: 159427 ctttctcctcttccttcttctg 159406
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>gb|AC132142.3| Mus musculus BAC clone RP23-75I5 from chromosome 7, complete sequence
          Length = 221548

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 12     cctttctcctcttccttcttct 33
              ||||||||||||||||||||||
Sbjct: 170874 cctttctcctcttccttcttct 170853
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>gb|AC138270.12| Mus musculus chromosome 7, clone RP23-323F17, complete sequence
          Length = 213855

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 12     cctttctcctcttccttcttct 33
              ||||||||||||||||||||||
Sbjct: 203008 cctttctcctcttccttcttct 203029
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>ref|NM_123367.1| Arabidopsis thaliana structural constituent of ribosome AT5G40040
           mRNA, complete cds
          Length = 345

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  ctttctcctcttccttcttct 33
           |||||||||||||||||||||
Sbjct: 301 ctttctcctcttccttcttct 281
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>gb|AC117643.15| Mus musculus chromosome 8, clone RP23-237I20, complete sequence
          Length = 186799

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 127479 ctttctcctcttccttcttct 127459
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>gb|AC079290.12| Mus musculus chromosome 18, clone RP23-330E13, complete sequence
          Length = 202255

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 122842 ctttctcctcttccttcttct 122862
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     gcgccgccggccagctgctgg 74
              |||||||||||||||||||||
Sbjct: 830787 gcgccgccggccagctgctgg 830807
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>gb|AC163008.9| Mus musculus chromosome 15, clone RP23-105P11, complete sequence
          Length = 211071

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    ctttctcctcttccttcttct 33
             |||||||||||||||||||||
Sbjct: 19262 ctttctcctcttccttcttct 19282
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>gb|AC163489.5| Mus musculus chromosome 8, clone RP24-354I15, complete sequence
          Length = 157478

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 148975 ctttctcctcttccttcttct 148995
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>gb|AC145839.3| Microcebus murinus clone CH257-408H17, complete sequence
          Length = 172417

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    gccggcgcagcgccggccgcctcca 107
             ||||| |||||||||||||||||||
Sbjct: 74312 gccggggcagcgccggccgcctcca 74288
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>gb|AC120411.9| Mus musculus chromosome 6, clone RP24-447O2, complete sequence
          Length = 202938

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 12     cctttctcctcttccttcttc 32
              |||||||||||||||||||||
Sbjct: 186279 cctttctcctcttccttcttc 186259
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>gb|AC154992.11| Mus musculus chromosome 1, clone RP23-420P19, complete sequence
          Length = 217255

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    ctttctcctcttccttcttct 33
             |||||||||||||||||||||
Sbjct: 29448 ctttctcctcttccttcttct 29468
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>gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome 8, complete sequence
          Length = 201483

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    ctttctcctcttccttcttct 33
             |||||||||||||||||||||
Sbjct: 42216 ctttctcctcttccttcttct 42236
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>gb|AC098715.3| Mus musculus BAC clone RP23-2D23 from 7, complete sequence
          Length = 247835

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    ccaggccactgtcgcctcctc 244
              |||||||||||||||||||||
Sbjct: 156942 ccaggccactgtcgcctcctc 156922
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>gb|AC101996.9| Mus musculus chromosome 15, clone RP24-441N7, complete sequence
          Length = 164681

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 13   ctttctcctcttccttcttct 33
            |||||||||||||||||||||
Sbjct: 2179 ctttctcctcttccttcttct 2159
to top
>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    cctttctcctcttccttcttc 32
             |||||||||||||||||||||
Sbjct: 70715 cctttctcctcttccttcttc 70695
to top
>gb|AC101833.14| Mus musculus chromosome 1, clone RP24-496H15, complete sequence
          Length = 167684

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 124842 ctttctcctcttccttcttct 124862
to top
>gb|BT010520.1| Arabidopsis thaliana At5g40040 gene, complete cds
          Length = 345

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  ctttctcctcttccttcttct 33
           |||||||||||||||||||||
Sbjct: 301 ctttctcctcttccttcttct 281
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 55      cgccgccggccagctgctggtcgtc 79
               |||||||||||||||||||| ||||
Sbjct: 1061734 cgccgccggccagctgctggccgtc 1061710
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 52      cagcgccgccggccagctgctggtc 76
               ||||| |||||||||||||||||||
Sbjct: 3796970 cagcggcgccggccagctgctggtc 3796946
to top
>emb|AJ404229.1|RSP404229 Rhodobacter sphaeroides McpJ gene for putative receptor protein
          Length = 2046

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 54   gcgccgccggccagctgctgg 74
            |||||||||||||||||||||
Sbjct: 1457 gcgccgccggccagctgctgg 1437
to top
>gb|DP000004.1| Lemur catta target 1 genomic scaffold
          Length = 1399362

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    gccggcgcagcgccggccgcctcca 107
             ||||| |||||||||||||||||||
Sbjct: 41327 gccggggcagcgccggccgcctcca 41303
to top
>gb|DP000024.1| Eulemur macaco macaco target 1 genomic scaffold
          Length = 1570569

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    gccggcgcagcgccggccgcctcca 107
             ||||| |||||||||||||||||||
Sbjct: 88202 gccggggcagcgccggccgcctcca 88178
to top
>gb|AC019254.12| Homo sapiens chromosome 15, clone RP11-424I19, complete sequence
          Length = 179030

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 136    ctgtccgctccgctgccaccc 156
              |||||||||||||||||||||
Sbjct: 124032 ctgtccgctccgctgccaccc 124012
to top
>gb|AC150729.3| Lemur catta clone LB2-190B3, complete sequence
          Length = 100759

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    gccggcgcagcgccggccgcctcca 107
             ||||| |||||||||||||||||||
Sbjct: 41327 gccggggcagcgccggccgcctcca 41303
to top
>dbj|AK176151.1| Arabidopsis thaliana mRNA for acidic ribosomal protein P2 -like,
           complete cds, clone: RAFL22-97-H01
          Length = 572

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  ctttctcctcttccttcttct 33
           |||||||||||||||||||||
Sbjct: 357 ctttctcctcttccttcttct 337
to top
>dbj|AK175884.1| Arabidopsis thaliana mRNA for acidic ribosomal protein P2 -like,
           complete cds, clone: RAFL22-52-K01
          Length = 572

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  ctttctcctcttccttcttct 33
           |||||||||||||||||||||
Sbjct: 357 ctttctcctcttccttcttct 337
to top
>dbj|AK175633.1| Arabidopsis thaliana mRNA for acidic ribosomal protein P2 -like
           protein, complete cds, clone: RAFL22-12-A22
          Length = 572

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  ctttctcctcttccttcttct 33
           |||||||||||||||||||||
Sbjct: 357 ctttctcctcttccttcttct 337
to top
>dbj|AK175632.1| Arabidopsis thaliana mRNA for acidic ribosomal protein P2 -like
           protein, complete cds, clone: RAFL22-11-J11
          Length = 572

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 13  ctttctcctcttccttcttct 33
           |||||||||||||||||||||
Sbjct: 357 ctttctcctcttccttcttct 337
to top
>dbj|AB022222.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUD12
          Length = 22601

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 13   ctttctcctcttccttcttct 33
            |||||||||||||||||||||
Sbjct: 5161 ctttctcctcttccttcttct 5181
to top
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence
          Length = 186431

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 155835 ctttctcctcttccttcttct 155815
to top
>gb|AC170734.3| Sorex araneus clone SA_Ba-257D3, complete sequence
          Length = 122469

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 103159 ctttctcctcttccttcttct 103139
to top
>gb|AC003664.1|AC003664 Homo sapiens chromosome 17, clone hCIT54K19, complete sequence
          Length = 202233

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    ctttctcctcttccttcttct 33
             |||||||||||||||||||||
Sbjct: 75292 ctttctcctcttccttcttct 75312
to top
>emb|AL772342.12| Mouse DNA sequence from clone RP23-105D19 on chromosome 2, complete
             sequence
          Length = 206806

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    cctttctcctcttccttcttc 32
             |||||||||||||||||||||
Sbjct: 59019 cctttctcctcttccttcttc 58999
to top
>gb|DP000022.1| Microcebus murinus target 1 genomic scaffold
          Length = 1595145

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 83    gccggcgcagcgccggccgcctcca 107
             ||||| |||||||||||||||||||
Sbjct: 74312 gccggggcagcgccggccgcctcca 74288
to top
>emb|AL806523.14| Mouse DNA sequence from clone RP23-423O7 on chromosome 4, complete
              sequence
          Length = 217762

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     ctttctcctcttccttcttct 33
              |||||||||||||||||||||
Sbjct: 190948 ctttctcctcttccttcttct 190928
to top
>gb|AC160027.16| Mus musculus 10 BAC RP23-192N23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 207847

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 272    tctctgtcatctgcttcagc 291
              ||||||||||||||||||||
Sbjct: 184966 tctctgtcatctgcttcagc 184985
to top
>ref|XM_465928.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tttctcctcttccttcttct 33
           ||||||||||||||||||||
Sbjct: 102 tttctcctcttccttcttct 83
to top
>ref|XM_465927.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1472

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tttctcctcttccttcttct 33
           ||||||||||||||||||||
Sbjct: 543 tttctcctcttccttcttct 524
to top
>gb|AF039037.2| Caenorhabditis elegans cosmid R02C2, complete sequence
          Length = 24361

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tttctcctcttccttcttct 33
            ||||||||||||||||||||
Sbjct: 7121 tttctcctcttccttcttct 7102
to top
>gb|AC112789.4| Mus musculus BAC clone RP23-151J21 from chromosome 7, complete sequence
          Length = 200592

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ctttctcctcttccttcttc 32
             ||||||||||||||||||||
Sbjct: 92227 ctttctcctcttccttcttc 92246
to top
>ref|XM_752220.1| Ustilago maydis 521 hypothetical protein (UM01166.1) partial mRNA
          Length = 6246

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   gcgagcctttctcctcttcc 26
           ||||||||||||||||||||
Sbjct: 550 gcgagcctttctcctcttcc 531
to top
>ref|XM_754492.1| Ustilago maydis 521 hypothetical protein (UM03438.1) partial mRNA
          Length = 2478

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tttctcctcttccttcttct 33
            ||||||||||||||||||||
Sbjct: 1383 tttctcctcttccttcttct 1364
to top
>gb|AC122256.3| Mus musculus BAC clone RP23-178H7 from 7, complete sequence
          Length = 183325

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ctttctcctcttccttcttc 32
              ||||||||||||||||||||
Sbjct: 130699 ctttctcctcttccttcttc 130718
to top
>emb|AL136366.24| Human DNA sequence from clone RP11-413C16 on chromosome 9p22.3-23
             Contains the 5' end of the NFIB gene for nuclear factor
             I/B (NFIB2, NRFIB3, NFI-RED), the 5' end of a novel gene
             and 2 CpG islands, complete sequence
          Length = 120282

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   tctgtcatctgcttcagcag 293
             ||||||||||||||||||||
Sbjct: 19696 tctgtcatctgcttcagcag 19677
to top
>emb|AJ243961.1|OSA243961 Oryza sativa chromosome 4 BAC l1332 genomic sequences
          Length = 74658

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    agcgccggccgcctccatcccccc 114
             |||||||||||||||||| |||||
Sbjct: 47956 agcgccggccgcctccattccccc 47979
to top
>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence
          Length = 150332

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttctcctcttccttcttctg 34
             ||||||||||||||||||||
Sbjct: 80206 ttctcctcttccttcttctg 80225
to top
>gb|AC142324.1| Pan troglodytes BAC clone RP43-73K6 from 7, complete sequence
          Length = 178050

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttctcctcttccttcttctg 34
             ||||||||||||||||||||
Sbjct: 51565 ttctcctcttccttcttctg 51584
to top
>ref|XM_504931.1| Yarrowia lipolytica CLIB122, YALI0F03047g predicted mRNA
          Length = 444

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tttctcctcttccttcttct 33
           ||||||||||||||||||||
Sbjct: 438 tttctcctcttccttcttct 419
to top
>emb|AL391001.12| Human DNA sequence from clone RP11-477H21 on chromosome 1 Contains part
              of the PBX1 gene for pre-B-cell leukemia transcription
              factor 1, complete sequence
          Length = 196730

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     cctttctcctcttccttctt 31
              ||||||||||||||||||||
Sbjct: 183850 cctttctcctcttccttctt 183831
to top
>emb|AL390882.12| Human DNA sequence from clone RP11-113D19 on chromosome 9p21.2-22.3
             Contains the IFNA21 gene for interferon, alpha 21, the
             IFNW1 gene for interferon, omega 1, an interferon, omega 1
             (IFNW1) pseudogene, the IFNB1 gene for interferon, beta 1,
             fibroblast, an interferon, beta 1, fibroblast (IFNB1)
             pseudogene and a novel gene, possible otholog of mouse
             RIKEN cDNA 4933428I03 gene, complete sequence
          Length = 162064

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    tctcctcttccttcttctgg 35
             ||||||||||||||||||||
Sbjct: 11839 tctcctcttccttcttctgg 11858
to top
>emb|AL136092.8| Human DNA sequence from clone RP3-496G1 on chromosome Xp11 Contains
            the EFNB1 gene for ephrin-B1 and a CpG island, complete
            sequence
          Length = 135245

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 12   cctttctcctcttccttctt 31
            ||||||||||||||||||||
Sbjct: 2270 cctttctcctcttccttctt 2289
to top
>emb|AL121872.12|HSB348B13 Human DNA sequence from clone RP13-348B13 on chromosome X Contains a
              pseudogene similar to part of SRI (sorcin) and a novel
              gene, complete sequence
          Length = 142689

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 13     ctttctcctcttccttcttc 32
              ||||||||||||||||||||
Sbjct: 115102 ctttctcctcttccttcttc 115083
to top
>emb|AL117329.8|HSBA191L9 Human DNA sequence from clone RP11-191L9 on chromosome 22, complete
           sequence
          Length = 146438

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 277 gtcatctgcttcagcagctgcaga 300
           |||||||||| |||||||||||||
Sbjct: 524 gtcatctgctccagcagctgcaga 547
to top
>emb|AL035697.19|HS45F6 Human DNA sequence from clone RP1-45F6 on chromosome 6q25.3-27 Contains
             part of the PARK2 gene for Parkinson disease (autosomal
             recessive, juvenile) 2, parkin (PDJ, PRKN, AR-JP),
             complete sequence
          Length = 134780

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    cctttctcctcttccttctt 31
             ||||||||||||||||||||
Sbjct: 66277 cctttctcctcttccttctt 66296
to top
>ref|XM_966662.1| PREDICTED: Tribolium castaneum similar to Synaptic vesicle membrane
            protein VAT-1 homolog (LOC660431), mRNA
          Length = 1727

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   tttctcctcttccttcttct 33
            ||||||||||||||||||||
Sbjct: 1342 tttctcctcttccttcttct 1323
to top
>gb|AC011848.11| Homo sapiens chromosome 17, clone RP11-354C22, complete sequence
          Length = 163577

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    agcctttctcctcttccttc 29
             ||||||||||||||||||||
Sbjct: 75879 agcctttctcctcttccttc 75898
to top
>emb|AL663115.11| Mouse DNA sequence from clone RP23-452C23 on chromosome 11 Contains the
             gene for a novel protein simialr to cell division cycle
             associated 4 Cdca4, a ribosomal protein L15 (Rpl15)
             pseudogene, the 3' end of a novel gene and two CpG
             islands, complete sequence
          Length = 183089

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ctttctcctcttccttcttc 32
             ||||||||||||||||||||
Sbjct: 79739 ctttctcctcttccttcttc 79720
to top
>emb|AL662970.2|OSJN00174 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0058K23,
             complete sequence
          Length = 164805

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 91    agcgccggccgcctccatcccccc 114
             |||||||||||||||||| |||||
Sbjct: 70871 agcgccggccgcctccattccccc 70848
to top
>emb|AL590448.1|CNS07EGF chromosome VIII of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 238147

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     tttctcctcttccttcttct 33
              ||||||||||||||||||||
Sbjct: 195175 tttctcctcttccttcttct 195194
to top
>emb|CR937025.1|PT027O15 Pan troglodytes chromosome 11 BAC PTB-027O15, complete sequence
          Length = 155399

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 16     tctcctcttccttcttctgg 35
              ||||||||||||||||||||
Sbjct: 120133 tctcctcttccttcttctgg 120114
to top
>gb|AC105278.2| Homo sapiens chromosome 1 clone RP5-1098H21, complete sequence
          Length = 135289

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 13    ctttctcctcttccttcttc 32
             ||||||||||||||||||||
Sbjct: 66889 ctttctcctcttccttcttc 66908
to top
>gb|AC092768.6| Homo sapiens chromosome 11, clone RP11-1149L18, complete sequence
          Length = 146364

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 104    tccatccccccatacacctccgtc 127
              |||||| |||||||||||||||||
Sbjct: 124973 tccatctccccatacacctccgtc 124950
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 59      gccggccagctgctggtcgt 78
               ||||||||||||||||||||
Sbjct: 1618451 gccggccagctgctggtcgt 1618432
to top
>emb|AL592283.5| Mouse DNA sequence from clone RP23-386C23 on chromosome 4, complete
             sequence
          Length = 197763

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   tctgtcatctgcttcagcag 293
             ||||||||||||||||||||
Sbjct: 88687 tctgtcatctgcttcagcag 88668
to top
>gb|AE005757.1| Caulobacter crescentus CB15 section 83 of 359 of the complete genome
          Length = 11110

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 76   cgtccctgccggcgcagcgccggccgcc 103
            |||||| |||||||| ||||||||||||
Sbjct: 5764 cgtccccgccggcgctgcgccggccgcc 5737
to top
>gb|AC104419.3| Homo sapiens chromosome 8, clone RP11-134O21, complete sequence
          Length = 164781

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ctctctgtcatctgcttcag 290
             ||||||||||||||||||||
Sbjct: 14748 ctctctgtcatctgcttcag 14729
to top
>gb|AC093579.2| Homo sapiens chromosome 1 clone RP11-78O9, complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     ctttctcctcttccttcttc 32
              ||||||||||||||||||||
Sbjct: 120875 ctttctcctcttccttcttc 120894
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 91       agcgccggccgcctccatcccccc 114
                |||||||||||||||||| |||||
Sbjct: 31493188 agcgccggccgcctccattccccc 31493165
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 14       tttctcctcttccttcttct 33
                ||||||||||||||||||||
Sbjct: 18353989 tttctcctcttccttcttct 18353970
to top
>gb|AC006032.2|AC006032 Homo sapiens BAC clone RP11-115E20 from Y, complete sequence
          Length = 170282

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ctttctcctcttccttcttc 32
             ||||||||||||||||||||
Sbjct: 23365 ctttctcctcttccttcttc 23346
to top
>gb|AC079892.4| Homo sapiens BAC clone RP11-240F15 from 2, complete sequence
          Length = 17714

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   cctttctcctcttccttctt 31
            ||||||||||||||||||||
Sbjct: 8077 cctttctcctcttccttctt 8058
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>gb|AC115485.3| Homo sapiens chromosome 8, clone GS1-57L11, complete sequence
          Length = 169622

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    ctctctgtcatctgcttcag 290
              ||||||||||||||||||||
Sbjct: 156780 ctctctgtcatctgcttcag 156761
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>gb|AC011084.17| Homo sapiens chromosome 11, clone RP11-21L19, complete sequence
          Length = 183854

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 104   tccatccccccatacacctccgtc 127
             |||||| |||||||||||||||||
Sbjct: 98866 tccatctccccatacacctccgtc 98889
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>gb|AC116118.16| Mus musculus chromosome 16, clone RP23-73P19, complete sequence
          Length = 128851

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 14    tttctcctcttccttcttct 33
             ||||||||||||||||||||
Sbjct: 58762 tttctcctcttccttcttct 58781
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>dbj|AP004861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0001A11
          Length = 153252

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tttctcctcttccttcttct 33
             ||||||||||||||||||||
Sbjct: 16913 tttctcctcttccttcttct 16894
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>dbj|AK073949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073M20, full
           insert sequence
          Length = 1468

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 14  tttctcctcttccttcttct 33
           ||||||||||||||||||||
Sbjct: 539 tttctcctcttccttcttct 520
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>dbj|AK065137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A05, full
           insert sequence
          Length = 1931

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 91  agcgccggccgcctccatcccccc 114
           |||||||||||||||||| |||||
Sbjct: 199 agcgccggccgcctccattccccc 176
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>emb|AL117264.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0313F03, complete
              sequence
          Length = 131195

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 91     agcgccggccgcctccatcccccc 114
              |||||||||||||||||| |||||
Sbjct: 111440 agcgccggccgcctccattccccc 111417
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>gb|AC121263.8| Mus musculus chromosome 18, clone RP24-219I3, complete sequence
          Length = 169528

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ctcctcttccttcttctggc 36
             ||||||||||||||||||||
Sbjct: 95714 ctcctcttccttcttctggc 95733
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>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete
              sequence
          Length = 206348

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     tttctcctcttccttcttct 33
              ||||||||||||||||||||
Sbjct: 136042 tttctcctcttccttcttct 136061
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>emb|AL845460.9| Mouse DNA sequence from clone RP23-453H2 on chromosome 2, complete
             sequence
          Length = 172295

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 14    tttctcctcttccttcttct 33
             ||||||||||||||||||||
Sbjct: 99845 tttctcctcttccttcttct 99826
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>gb|AC165360.3| Mus musculus BAC clone RP23-110L20 from chromosome 17, complete
             sequence
          Length = 217732

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    ctttctcctcttccttcttc 32
             ||||||||||||||||||||
Sbjct: 99890 ctttctcctcttccttcttc 99871
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>gb|AC134867.3| Mus musculus BAC clone RP23-18L24 from 10, complete sequence
          Length = 200631

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 272    tctctgtcatctgcttcagc 291
              ||||||||||||||||||||
Sbjct: 131014 tctctgtcatctgcttcagc 130995
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     tttctcctcttccttcttct 33
              ||||||||||||||||||||
Sbjct: 425521 tttctcctcttccttcttct 425540
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      cgccggccagctgctggtcg 77
               ||||||||||||||||||||
Sbjct: 2241082 cgccggccagctgctggtcg 2241063
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>emb|AL831727.6| Mouse DNA sequence from clone RP23-210M20 on chromosome 4, complete
              sequence
          Length = 176930

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    ctgtacttggaggaacatct 611
              ||||||||||||||||||||
Sbjct: 131409 ctgtacttggaggaacatct 131428


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,671,867
Number of Sequences: 3902068
Number of extensions: 5671867
Number of successful extensions: 128426
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 127559
Number of HSP's gapped (non-prelim): 867
length of query: 632
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 609
effective length of database: 17,143,297,704
effective search space: 10440268301736
effective search space used: 10440268301736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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