>dbj|D12920.2|WHTHBP1AC Triticum aestivum mRNA for transcription factor HBP-1a(c14),
           complete cds
          Length = 1734

 Score =  729 bits (368), Expect = 0.0
 Identities = 423/440 (96%), Gaps = 1/440 (0%)
 Strand = Plus / Plus

                                                                       
Query: 202 aggaggtgaaaggaagaaaggactagaggcgaggaaataataatgggaaagggatatgtg 261
           ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 186 aggaggtgaaaggaagagaggactagagacgaggaaataataatgggaaagggagatgtg 245

                                                                       
Query: 262 gccacgaggtccaaatcccagaaatcgtcgacagtacagaatgaacagagtacacctact 321
           ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 246 gccactaggtccaaatcccagaaatcgtcgacagcacagaatgaacagagtacacctact 305

                                                                       
Query: 322 aatcctcctacagcatatcctgactggtcccagtttcaggcatactataatgtccctggc 381
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 306 aatcctcctacagcatatcctgactggtcccagtttcaggcatactataatgtccctggt 365

                                                                       
Query: 382 acggctcaaatgaccccaccggcttattttcattcaacggtggctccaagtcctcagggg 441
           ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 acgactcaaatgaccccgccggcttattttcattcaacggtggctccaagtcctcagggg 425

                                                                       
Query: 442 catccatatatgtggggtccacagatgatgcctccttacgggacgccgccaccatacgca 501
           |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 426 catccatatatgtggggtccacagatgatgcctccttatgggacaccgccaccatacgca 485

                                                                       
Query: 502 acgatgtatgctcaaggcgcaccatatcagcaggcacctatgccaccgggctcacaccca 561
           || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 486 acaatgtatgctcaaggcacaccatatcagcaggctcctatgccaccgggctcacaccca 545

                                                                       
Query: 562 tacagcccatatcctgttcaagcaccaaatgggacagttcaaactcctacattctggtgc 621
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 546 tacagcccatatcctgttcaagcaccaaatgggacagttcaaactcctaca-tctggcgc 604

                               
Query: 622 cggagggtcagagacagata 641
            |||||||| ||||||||||
Sbjct: 605 tggagggtcggagacagata 624



 Score =  121 bits (61), Expect = 3e-24
 Identities = 106/121 (87%)
 Strand = Plus / Plus

                                                                       
Query: 83  tctgcccccttccaccggcccggcgcggagtggagatccgcccgcgccgattcattctgc 142
           |||||||||||||||||| |||||| ||||  |||||||| || ||| |||||||||| |
Sbjct: 2   tctgcccccttccaccgggccggcgtggagccgagatccgtccccgctgattcattcttc 61

                                                                       
Query: 143 tggtctggttagatactccattgctccatctacaaaacgaaggacacataaaagaacaaa 202
           ||||||||||||| | || || ||||||||||| |||| |||||||||||||||| ||||
Sbjct: 62  tggtctggttagagattcgatcgctccatctacgaaacaaaggacacataaaagagcaaa 121

            
Query: 203 g 203
           |
Sbjct: 122 g 122

>dbj|AK066563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013071G08, full
           insert sequence
          Length = 2060

 Score =  321 bits (162), Expect = 2e-84
 Identities = 318/370 (85%)
 Strand = Plus / Plus

                                                                       
Query: 244 atgggaaagggatatgtggccacgaggtccaaatcccagaaatcgtcgacagtacagaat 303
           |||||||| ||| | || ||||| ||||||||||| || ||||| ||| |   |||||||
Sbjct: 485 atgggaaaaggagaggtagccactaggtccaaatctcaaaaatcatcggcgacacagaat 544

                                                                       
Query: 304 gaacagagtacacctactaatcctcctacagcatatcctgactggtcccagtttcaggca 363
           |||||||||||||| |||||||||||||| |||||||| |||||||| || |||||||||
Sbjct: 545 gaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttcaggca 604

                                                                       
Query: 364 tactataatgtccctggcacggctcaaatgaccccaccggcttattttcattcaacggtg 423
           |||||||||    |||| || |||| ||||||||||||||  | ||| ||| |||  |||
Sbjct: 605 tactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaaatgtg 664

                                                                       
Query: 424 gctccaagtcctcaggggcatccatatatgtggggtccacagatgatgcctccttacggg 483
           |||||||||||||||||||| |||||||||||||||||||||||||||||||| || || 
Sbjct: 665 gctccaagtcctcaggggcacccatatatgtggggtccacagatgatgcctccctatgga 724

                                                                       
Query: 484 acgccgccaccatacgcaacgatgtatgctcaaggcgcaccatatcagcaggcacctatg 543
           || ||||| ||||| ||  |||||||||| |||||  |||||||||||||||||||||||
Sbjct: 725 acaccgccgccatatgcggcgatgtatgcgcaagggacaccatatcagcaggcacctatg 784

                                                                       
Query: 544 ccaccgggctcacacccatacagcccatatcctgttcaagcaccaaatgggacagttcaa 603
           | |||||| |||||||||||||  || ||||| |  ||| ||||||||||||||||||||
Sbjct: 785 ctaccgggttcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaa 844

                     
Query: 604 actcctacat 613
           ||||||||||
Sbjct: 845 actcctacat 854

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 359     aggcatactataatgtccctggcacggctcaaatgaccccaccggcttattttcattcaa 418
               ||||||||||||||    |||| || |||| ||||||||||||||  | ||| ||| |||
Sbjct: 7332865 aggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaa 7332806

                                                              
Query: 419     cggtggctccaagtcctcaggggcatccatatatgtggggtccacag 465
                 ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7332805 atgtggctccaagtcctcaggggcacccatatatgtggggtccacag 7332759



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                           
Query: 299     agaatgaacagagtacacctactaatcctcctacagcatatcctgactggtcccagtttc 358
               ||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||
Sbjct: 7333006 agaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttc 7332947

                  
Query: 359     agg 361
               |||
Sbjct: 7332946 agg 7332944



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                           
Query: 463     cagatgatgcctccttacgggacgccgccaccatacgcaacgatgtatgctcaaggcgca 522
               |||||||||||||| || || || ||||| ||||| ||  |||||||||| |||||  ||
Sbjct: 7332482 cagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggaca 7332423

                                           
Query: 523     ccatatcagcaggcacctatgccaccgg 550
               |||||||||||||||||||||| |||||
Sbjct: 7332422 ccatatcagcaggcacctatgctaccgg 7332395



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                        
Query: 553     tcacacccatacagcccatatcctgttcaagcaccaaatgggacagttcaaactcct 609
               |||||||||||||  || ||||| |  ||| ||||||||||||||||||||||||||
Sbjct: 7332296 tcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcct 7332240

>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0060E18, from chromosome 3, complete sequence
          Length = 147983

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                         
Query: 359   aggcatactataatgtccctggcacggctcaaatgaccccaccggcttattttcattcaa 418
             ||||||||||||||    |||| || |||| ||||||||||||||  | ||| ||| |||
Sbjct: 84121 aggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaa 84062

                                                            
Query: 419   cggtggctccaagtcctcaggggcatccatatatgtggggtccacag 465
               ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 84061 atgtggctccaagtcctcaggggcacccatatatgtggggtccacag 84015



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                         
Query: 299   agaatgaacagagtacacctactaatcctcctacagcatatcctgactggtcccagtttc 358
             ||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||
Sbjct: 84262 agaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttc 84203

                
Query: 359   agg 361
             |||
Sbjct: 84202 agg 84200



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                         
Query: 463   cagatgatgcctccttacgggacgccgccaccatacgcaacgatgtatgctcaaggcgca 522
             |||||||||||||| || || || ||||| ||||| ||  |||||||||| |||||  ||
Sbjct: 83738 cagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggaca 83679

                                         
Query: 523   ccatatcagcaggcacctatgccaccgg 550
             |||||||||||||||||||||| |||||
Sbjct: 83678 ccatatcagcaggcacctatgctaccgg 83651



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                      
Query: 553   tcacacccatacagcccatatcctgttcaagcaccaaatgggacagttcaaactcct 609
             |||||||||||||  || ||||| |  ||| ||||||||||||||||||||||||||
Sbjct: 83552 tcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcct 83496

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                           
Query: 359     aggcatactataatgtccctggcacggctcaaatgaccccaccggcttattttcattcaa 418
               ||||||||||||||    |||| || |||| ||||||||||||||  | ||| ||| |||
Sbjct: 7330760 aggcatactataatcctgctgggacagctccaatgaccccaccgggctttttccatccaa 7330701

                                                              
Query: 419     cggtggctccaagtcctcaggggcatccatatatgtggggtccacag 465
                 ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 7330700 atgtggctccaagtcctcaggggcacccatatatgtggggtccacag 7330654



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                           
Query: 299     agaatgaacagagtacacctactaatcctcctacagcatatcctgactggtcccagtttc 358
               ||||||||||||||||||| |||||||||||||| |||||||| |||||||| || ||||
Sbjct: 7330901 agaatgaacagagtacacccactaatcctcctactgcatatccggactggtctcaatttc 7330842

                  
Query: 359     agg 361
               |||
Sbjct: 7330841 agg 7330839



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                           
Query: 463     cagatgatgcctccttacgggacgccgccaccatacgcaacgatgtatgctcaaggcgca 522
               |||||||||||||| || || || ||||| ||||| ||  |||||||||| |||||  ||
Sbjct: 7330377 cagatgatgcctccctatggaacaccgccgccatatgcggcgatgtatgcgcaagggaca 7330318

                                           
Query: 523     ccatatcagcaggcacctatgccaccgg 550
               |||||||||||||||||||||| |||||
Sbjct: 7330317 ccatatcagcaggcacctatgctaccgg 7330290



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 50/57 (87%)
 Strand = Plus / Minus

                                                                        
Query: 553     tcacacccatacagcccatatcctgttcaagcaccaaatgggacagttcaaactcct 609
               |||||||||||||  || ||||| |  ||| ||||||||||||||||||||||||||
Sbjct: 7330191 tcacacccatacaatccttatcccgggcaatcaccaaatgggacagttcaaactcct 7330135

>ref|XM_415026.1| PREDICTED: Gallus gallus similar to Thioredoxin-like protein
           KIAA1162 homolog precursor (LOC416729), mRNA
          Length = 2398

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ccggcccggcgcggagtggag 117
           |||||||||||||||||||||
Sbjct: 591 ccggcccggcgcggagtggag 611

>ref|XM_779562.1| PREDICTED: Strongylocentrotus purpuratus similar to Rho GTPase
            activating protein 21 (LOC579445), partial mRNA
          Length = 2347

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 346  tggtcccagtttcaggcatac 366
            |||||||||||||||||||||
Sbjct: 2188 tggtcccagtttcaggcatac 2208

>gb|AF153590.1|AF153590 Mabuya macularia cytochrome b gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 624

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 383 cggctcaaatgaccccaccggctta 407
           |||||||||| ||||||||||||||
Sbjct: 471 cggctcaaataaccccaccggctta 495

>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 38      cggcctcctgccgccggcgca 58
               |||||||||||||||||||||
Sbjct: 2605643 cggcctcctgccgccggcgca 2605623

>emb|AL844495.6| Mouse DNA sequence from clone RP23-252L9 on chromosome 2, complete
             sequence
          Length = 174818

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 196   gaacaaaggaggtgaaaggaa 216
             |||||||||||||||||||||
Sbjct: 90025 gaacaaaggaggtgaaaggaa 90045

>gb|AC163107.3| Mus musculus BAC clone RP23-156A21 from chromosome 16, complete
             sequence
          Length = 221691

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 200   aaaggaggtgaaaggaagaaagga 223
             ||||||||||||||||||| ||||
Sbjct: 64114 aaaggaggtgaaaggaagagagga 64137

>gb|AC006377.3| Homo sapiens BAC clone RP11-450H7 from 7, complete sequence
          Length = 176463

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   accatatcagcaggcaccta 541
             ||||||||||||||||||||
Sbjct: 13221 accatatcagcaggcaccta 13202

>gb|AC126936.4| Mus musculus BAC clone RP24-196L14 from chromosome 16, complete sequence
          Length = 177785

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 200    aaaggaggtgaaaggaagaaagga 223
              ||||||||||||||||||| ||||
Sbjct: 157373 aaaggaggtgaaaggaagagagga 157396

>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence
          Length = 199388

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 76     aaattcctctgcccccttccaccggccc 103
              |||||||| ||||||||||||| |||||
Sbjct: 181096 aaattcctgtgcccccttccacgggccc 181123

>emb|AL359266.14| Human DNA sequence from clone RP11-26P21 on chromosome 13 Contains the
             3' end of the DIAPH3 gene for diaphanous homolog 3
             (Drosophila), complete sequence
          Length = 206407

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    aattcctctgcccccttcca 96
             ||||||||||||||||||||
Sbjct: 12669 aattcctctgcccccttcca 12688

>emb|AL669999.1|NCB21D9 Neurospora crassa DNA linkage group II BAC clone B21D9
          Length = 71024

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 587   caaatgggacagttcaaact 606
             ||||||||||||||||||||
Sbjct: 36384 caaatgggacagttcaaact 36365

>gb|AC117661.20| Mus musculus chromosome 6, clone RP23-343P1, complete sequence
          Length = 180209

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   tgtggggtccacagatgatg 471
             ||||||||||||||||||||
Sbjct: 23979 tgtggggtccacagatgatg 23998

>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence
          Length = 183519

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 192    aaaagaacaaaggaggtgaaaggaagaaagga 223
              ||||||||||| || | |||||||||||||||
Sbjct: 158729 aaaagaacaaaagaagggaaaggaagaaagga 158760

>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome
          Length = 4171146

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     acacataaaagaacaaagga 205
               ||||||||||||||||||||
Sbjct: 1620277 acacataaaagaacaaagga 1620258

>gb|AC069547.7| Homo sapiens chromosome 10 clone RP11-521C22, complete sequence
          Length = 189144

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 206   ggtgaaaggaagaaaggact 225
             ||||||||||||||||||||
Sbjct: 39643 ggtgaaaggaagaaaggact 39662

>gb|AC099555.4| Papio anubis clone RP41-390O6, complete sequence
          Length = 180643

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 522   accatatcagcaggcaccta 541
             ||||||||||||||||||||
Sbjct: 72311 accatatcagcaggcaccta 72292

>gb|AC122362.5| Mus musculus BAC clone RP23-430N1 from chromosome 6, complete sequence
          Length = 212275

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 452    tgtggggtccacagatgatg 471
              ||||||||||||||||||||
Sbjct: 184892 tgtggggtccacagatgatg 184911

>gb|AC154367.1| Mus musculus BAC clone RP23-123N11 from 13, complete sequence
          Length = 185378

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 76     aaattcctctgcccccttccaccggccc 103
              |||||||| ||||||||||||| |||||
Sbjct: 170431 aaattcctgtgcccccttccacgggccc 170404

>emb|AL627134.9| Mouse DNA sequence from clone RP23-71I19 on chromosome 4, complete
              sequence
          Length = 172418

 Score = 40.1 bits (20), Expect = 8.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 200    aaaggaggtgaaaggaagaaagga 223
              ||||||||||| ||||||||||||
Sbjct: 169041 aaaggaggtgagaggaagaaagga 169018


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,530,322
Number of Sequences: 3902068
Number of extensions: 5530322
Number of successful extensions: 112236
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 112040
Number of HSP's gapped (non-prelim): 192
length of query: 641
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 618
effective length of database: 17,143,297,704
effective search space: 10594557981072
effective search space used: 10594557981072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)