| Clone Name | basd14a10 |
|---|---|
| Clone Library Name | barley_pub |
>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)| (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 Score = 51.6 bits (122), Expect = 1e-06 Identities = 20/23 (86%), Positives = 22/23 (95%) Frame = +3 Query: 9 EDGVEQNWGLFYPNMQHVYPISF 77 + GVEQNWGLFYPNMQHVYPI+F Sbjct: 290 DSGVEQNWGLFYPNMQHVYPINF 312
>E13E_HORVU (Q02438) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) Length = 316 Score = 35.0 bits (79), Expect = 0.095 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = +3 Query: 12 DGVEQNWGLFYPNMQHVYPISF 77 D VE+N+GLF+PN Q VYP +F Sbjct: 293 DEVERNFGLFFPNKQPVYPTTF 314
>E13F_HORVU (Q02439) Putative glucan endo-1,3-beta-glucosidase GVI precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) Length = 321 Score = 32.7 bits (73), Expect = 0.47 Identities = 12/22 (54%), Positives = 17/22 (77%) Frame = +3 Query: 12 DGVEQNWGLFYPNMQHVYPISF 77 +GVEQN+G+F P+M VY + F Sbjct: 295 EGVEQNFGMFQPDMSQVYHVDF 316
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 32.3 bits (72), Expect = 0.62 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +3 Query: 21 EQNWGLFYPNMQHVYPISF**GSS 92 E+NWG+ +PN VYP+S GSS Sbjct: 329 ERNWGILFPNGTSVYPLSLSGGSS 352
>PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-)| Length = 804 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +3 Query: 156 AHIMYCT-GLGLGTWDATAEAAQMRTRVVVACYTSVP 263 A I +CT GLG+ W +TA + VV+AC +P Sbjct: 602 AAIAHCTRGLGIWDWASTARSIGAEPDVVLACAGDIP 638
>E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIII) ((1->3)-beta-glucanase isoenzyme GIII) (Beta-1,3-endoglucanase GIII) Length = 330 Score = 29.6 bits (65), Expect = 4.0 Identities = 12/22 (54%), Positives = 16/22 (72%) Frame = +3 Query: 12 DGVEQNWGLFYPNMQHVYPISF 77 D +E+N+GLF PNM Y I+F Sbjct: 309 DELEKNFGLFKPNMSPAYAITF 330
>THT1_SCHPO (Q09684) Nuclear fusion protein tht1| Length = 577 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 311 RGSVCICFPSIENHTYWYTSIASHYYSRTHLSCLS 207 RGS C +E+ + W+ S SH++ HL L+ Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148
>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)| Length = 310 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = +3 Query: 258 VPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVGFKISSK 395 VPV+++F+ +AY +D ++ YTH+ P FK+S+K Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159
>TPX_PSEAE (P57668) Probable thiol peroxidase (EC 1.11.1.-)| Length = 165 Score = 29.3 bits (64), Expect = 5.2 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 5/108 (4%) Frame = -3 Query: 314 GRGSVCICFPSIENHTYWYT----SIASHYYSRTHLSCLSGRIPSSQPKPCTIHNVRIRT 147 G+ V FPS++ T + ++ + + T + C+S +P +Q + C + Sbjct: 44 GKRKVLNIFPSVDTPTCATSVRKFNVEAGKLANTVVLCISADLPFAQKRFCGAEGLENVV 103 Query: 146 AYTLLYARAYVRTYGH*VAATSSEADGVDVLHVGV-EEPPVLLHAVLV 6 + L R ++ YG VA S G+ V V +E +LH+ LV Sbjct: 104 NLSTLRGREFLENYG--VAIASGPLAGLAARAVVVLDEQNKVLHSELV 149
>E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 370 Score = 28.9 bits (63), Expect = 6.8 Identities = 10/20 (50%), Positives = 15/20 (75%) Frame = +3 Query: 18 VEQNWGLFYPNMQHVYPISF 77 +E+++G+FYPN Q YP F Sbjct: 327 LEKHFGVFYPNKQKKYPFGF 346
>E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) Length = 327 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/19 (57%), Positives = 16/19 (84%) Frame = +3 Query: 21 EQNWGLFYPNMQHVYPISF 77 E+++GLFYPN + VY I+F Sbjct: 290 ERHFGLFYPNKRPVYHINF 308
>GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4| glucanase) Length = 370 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/20 (55%), Positives = 16/20 (80%) Frame = +3 Query: 18 VEQNWGLFYPNMQHVYPISF 77 +E+++GLF PN Q YP+SF Sbjct: 327 LEKHFGLFSPNKQPKYPLSF 346 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,407,983 Number of Sequences: 219361 Number of extensions: 1264488 Number of successful extensions: 2782 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2728 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2782 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3014947676 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)