ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd14a02 |
|---|---|
| Clone Library Name | barley_pub |
>AMP2A_ARATH (Q9FV49) Methionine aminopeptidase 2A (EC 3.4.11.18) (MetAP 2A)| (MAP 2A) (Peptidase M 2A) Length = 441 Score = 104 bits (259), Expect(2) = 2e-34 Identities = 51/75 (68%), Positives = 53/75 (70%) Frame = +2 Query: 332 EDGAGAPXXXXXXXXXXXXXXXXDSLQQTDPPSIPVDELFPSGDFPEGEIQQYKDDNLWR 511 EDG A SLQQTDPPSIPV ELFPSGDFP+GEIQQY DDNLWR Sbjct: 53 EDGLKAEASTKKKKKKSKSKKKKSSLQQTDPPSIPVLELFPSGDFPQGEIQQYNDDNLWR 112 Query: 512 TTSEEKRELERLQKP 556 TTSEEKRE+ERLQKP Sbjct: 113 TTSEEKREMERLQKP 127 Score = 61.6 bits (148), Expect(2) = 2e-34 Identities = 27/35 (77%), Positives = 34/35 (97%) Frame = +3 Query: 549 KNPMYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 + P+YNS+R+AAEVHRQVRKYMRSI+KPGMLM++L Sbjct: 125 QKPIYNSLRQAAEVHRQVRKYMRSILKPGMLMIDL 159
>AMP2B_ARATH (Q56Y85) Methionine aminopeptidase 2B (EC 3.4.11.18) (MetAP 2B)| (MAP 2B) (Peptidase M 2B) Length = 439 Score = 97.8 bits (242), Expect(2) = 7e-33 Identities = 44/49 (89%), Positives = 47/49 (95%) Frame = +2 Query: 410 QQTDPPSIPVDELFPSGDFPEGEIQQYKDDNLWRTTSEEKRELERLQKP 556 QQTDPPSIPV ELFPSG+FPEGEIQ+YKDDNLWRTTSEEKRELER +KP Sbjct: 77 QQTDPPSIPVVELFPSGEFPEGEIQEYKDDNLWRTTSEEKRELERFEKP 125 Score = 62.8 bits (151), Expect(2) = 7e-33 Identities = 27/36 (75%), Positives = 34/36 (94%) Frame = +3 Query: 546 YKNPMYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 ++ P+YNSVRRAAEVHRQVRKY+RSI+KPGMLM ++ Sbjct: 122 FEKPIYNSVRRAAEVHRQVRKYVRSIVKPGMLMTDI 157
>AMPM2_RAT (P38062) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 51.6 bits (122), Expect(2) = 7e-14 Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 5/49 (10%) Frame = +2 Query: 413 QTDPPSIPVDELFPSGDFPEGEIQQYKDDN-----LWRTTSEEKRELER 544 QTDPPS+P+ +L+P+G FP+G+ +Y WRTTSEEK+ L++ Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQ 160 Score = 45.1 bits (105), Expect(2) = 7e-14 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = +3 Query: 558 MYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 ++N R AAE HRQVRKY+ S IKPGM M+E+ Sbjct: 165 IWNDFREAAEAHRQVRKYVMSWIKPGMTMIEI 196
>AMPM2_MOUSE (O08663) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 51.6 bits (122), Expect(2) = 7e-14 Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 5/49 (10%) Frame = +2 Query: 413 QTDPPSIPVDELFPSGDFPEGEIQQYKDDN-----LWRTTSEEKRELER 544 QTDPPS+P+ +L+P+G FP+G+ +Y WRTTSEEK+ L++ Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQ 160 Score = 45.1 bits (105), Expect(2) = 7e-14 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = +3 Query: 558 MYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 ++N R AAE HRQVRKY+ S IKPGM M+E+ Sbjct: 165 IWNDFREAAEAHRQVRKYVMSWIKPGMTMIEI 196
>AMPM2_HUMAN (P50579) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (Initiation factor 2-associated 67 kDa glycoprotein) (p67) (p67eIF2) Length = 478 Score = 51.6 bits (122), Expect(2) = 7e-14 Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 5/49 (10%) Frame = +2 Query: 413 QTDPPSIPVDELFPSGDFPEGEIQQYKDDN-----LWRTTSEEKRELER 544 QTDPPS+P+ +L+P+G FP+G+ +Y WRTTSEEK+ L++ Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQDGRTAAWRTTSEEKKALDQ 160 Score = 45.1 bits (105), Expect(2) = 7e-14 Identities = 20/32 (62%), Positives = 25/32 (78%) Frame = +3 Query: 558 MYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 ++N R AAE HRQVRKY+ S IKPGM M+E+ Sbjct: 165 IWNDFREAAEAHRQVRKYVMSWIKPGMTMIEI 196
>AMPM2_YEAST (P38174) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) Length = 421 Score = 37.4 bits (85), Expect(2) = 3e-07 Identities = 19/37 (51%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 437 VDELFPSGDFPEGEIQQYKDD-NLWRTTSEEKRELER 544 ++ LFP G +PEG Y D NL RTT EE R L+R Sbjct: 58 IELLFPDGKYPEGAWMDYHQDFNLQRTTVEESRYLKR 94 Score = 36.6 bits (83), Expect(2) = 3e-07 Identities = 14/31 (45%), Positives = 24/31 (77%) Frame = +3 Query: 561 YNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 +N VR+ AE+HR+VR+ ++ I PGM +M++ Sbjct: 102 WNDVRKGAEIHRRVRRAIKDRIVPGMKLMDI 132
>AMPM2_ENCHE (Q6XMH6) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 39.7 bits (91), Expect = 0.008 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 9/54 (16%) Frame = +3 Query: 519 AKKRGNWRDYKNP---------MYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 A ++G D KN + RRAAE HR+VR ++SIIKPGM ++E+ Sbjct: 22 AYRKGRLLDSKNAEVENTTESDILQDARRAAEAHRRVRYKVQSIIKPGMTLLEI 75
>AMPM2_ENCIN (Q6XMH7) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 35.0 bits (79), Expect = 0.20 Identities = 14/32 (43%), Positives = 23/32 (71%) Frame = +3 Query: 558 MYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 + RRAAE HR+ R ++SII+PG+ ++E+ Sbjct: 44 LLQDARRAAEAHRRARYKVQSIIRPGITLLEI 75
>AMPM2_ENCCU (Q8SR45) Methionine aminopeptidase 2 (EC 3.4.11.18) (MetAP 2)| (Peptidase M 2) (MetAP2) (MAP-2) Length = 358 Score = 34.7 bits (78), Expect = 0.25 Identities = 13/35 (37%), Positives = 25/35 (71%) Frame = +3 Query: 549 KNPMYNSVRRAAEVHRQVRKYMRSIIKPGMLMMEL 653 ++ + RRAAE HR+ R ++SI++PG+ ++E+ Sbjct: 41 ESDILQDARRAAEAHRRARYRVQSIVRPGITLLEI 75
>NINAC_DROME (P10676) Neither inactivation nor afterpotential protein C (EC| 2.7.11.1) Length = 1501 Score = 31.6 bits (70), Expect = 2.2 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%) Frame = +2 Query: 422 PPSIPVDELFPSGDFPEGEIQQYKD-DNLWRTTSEEKRELERLQK 553 PP +P +L D PEG +++Y++ +N+ R ++LE ++K Sbjct: 552 PPEVPPSKLKYRRDDPEGNVERYREFENILRDIDFNHKQLETVRK 596
>ESCO1_HUMAN (Q5FWF5) N-acetyltransferase ESCO1 (EC 2.3.1.-) (Establishment of| cohesion 1 homolog 1) (ECO1 homolog 1) (ESO1 homolog 1) (Establishment factor-like protein 1) (EFO1p) (hEFO1) (CTF7 homolog 1) Length = 840 Score = 31.6 bits (70), Expect = 2.2 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 2/60 (3%) Frame = +3 Query: 402 TPFSRQILHQSLW-MSFSLQEIFLREKSSNTRMIIYG-EQLAKKRGNWRDYKNPMYNSVR 575 T RQILHQ F K+ + I+ G LAKK NW K +NSV+ Sbjct: 344 TSVERQILHQKETNQDVQCNRFFPSRKTKPVKCILNGINSLAKKNSNWTKIKLSKFNSVQ 403
>ISY1_CANGA (Q6FR30) Pre-mRNA-splicing factor ISY1| Length = 203 Score = 31.6 bits (70), Expect = 2.2 Identities = 15/47 (31%), Positives = 24/47 (51%) Frame = +3 Query: 483 SNTRMIIYGEQLAKKRGNWRDYKNPMYNSVRRAAEVHRQVRKYMRSI 623 S T + +Y E A+ R ++ YK P SVR AE ++ +R + Sbjct: 8 SQTVLALYQEHKAESRRDYNRYKRPRVESVRDPAEAREWYKQTLREV 54
>PITX3_HUMAN (O75364) Pituitary homeobox 3 (Homeobox protein PITX3)| Length = 302 Score = 30.4 bits (67), Expect = 4.8 Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%) Frame = -3 Query: 198 APISLVAASVLP---------PAISYVSFYGGGEPSARAAAVGSGVTGQRTASAVAARTS 46 +P S +AAS++P P + GGG P AAV SG ASA AA + Sbjct: 189 SPPSSIAASMVPSAAAAPGTVPGPGALQGLGGGPPGLAPAAVSSGAVSCPYASAAAAAAA 248 Query: 45 PSA 37 ++ Sbjct: 249 AAS 251
>CBP23_HORVU (P52711) Serine carboxypeptidase II-3 precursor (EC 3.4.16.6)| (CP-MII.3) [Contains: Serine carboxypeptidase II-3 chain A; Serine carboxypeptidase II-3 chain B] Length = 516 Score = 30.4 bits (67), Expect = 4.8 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -3 Query: 129 GEPSARAAAVGSGVTGQRTASAVAARTSPSARLISAGRKK 10 G PS+RA+ ++T + A R +P A + AGRK+ Sbjct: 43 GSPSSRASWESLAAVEEQTTTKAAGRPAPVAAAVEAGRKE 82
>NETR_SAGLB (Q5G265) Neurotrypsin precursor (EC 3.4.21.-)| Length = 875 Score = 30.0 bits (66), Expect = 6.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 151 RYGWG*HGCSNQGDGGIACWANQGNKRYS 237 R WG H CS++ D GIAC+ R S Sbjct: 467 RRQWGRHDCSHREDVGIACYPGSEGHRLS 495
>JIP_CAEEL (P34609) JNK-interacting protein (JIP) (JNK MAP kinase scaffold| protein) (Uncoordinated protein 16) Length = 1157 Score = 29.6 bits (65), Expect = 8.2 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Frame = +2 Query: 23 ADIRRAEGDVLAATADAVLCPVTPLPTAAARAEGSPPP*KETYDMAGGSTDAATKE---- 190 +DI + D+ ++ADA+ P+T R SP +E + A +T KE Sbjct: 267 SDIEPSPRDIPQSSADALTSPITTKEPTPKREAASPKQSEE--EEADETTSVDPKENNDL 324 Query: 191 MGALHVGQTKETNDILKNASD 253 +GA G +E +++K S+ Sbjct: 325 LGADLTGMGREVENLIKENSE 345
>SYT_BUCAP (P46244) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA| ligase) (ThrRS) Length = 642 Score = 29.6 bits (65), Expect = 8.2 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Frame = +3 Query: 426 HQSLWMSFSLQEIFLREKSSNTRM------IIYGEQLAKKRGNWRDYKNPMYNS 569 H + W+ F+ EIF+REK + ++ + + +K G+W +Y++ ++ + Sbjct: 267 HNNGWIIFNELEIFVREKLKEYKYKEVKTPLLIDKSIWQKSGHWDNYQDAIFTT 320 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 83,302,018 Number of Sequences: 219361 Number of extensions: 1542048 Number of successful extensions: 6422 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 6021 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6400 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
