>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = -2

Query: 478 TSKR*AVGRSWESAQRRMSGRTSHGSMVATRRDHRCTAHSIHIIRPPPPKPSAGARSPAP 299
           TS R  +G+ W+S   + S R    S    RR     + S     PPPP P    RSP P
Sbjct: 538 TSPRMQMGKRWQSPVTKSSRRRRSPSPPPARRRR---SPSPAPPPPPPPPPPRRRRSPTP 594

>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor|
           (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and
           thymus-derived activator for ERBB kinases) (NTAK)]
          Length = 868

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = -2

Query: 430 RMSGRTSHGSMVATRRDHRCTAHSIHIIRP-----PPPKPSAGARSPA 302
           R S R+S GS   T       ++S  I RP     P P+P    RSPA
Sbjct: 46  RSSSRSSRGSTTTTSSSENSGSNSGSIFRPAAPPEPRPQPQPQPRSPA 93

>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -2

Query: 403  SMVATRRDHRCTAHSIHIIRPPPPKPSAGARSPAP 299
            ++ AT+   + ++ ++   RPPPP+P A    PAP
Sbjct: 1088 TLPATQLQQKDSSQTLEPKRPPPPRPVAPPARPAP 1122


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,207,426
Number of Sequences: 219361
Number of extensions: 696603
Number of successful extensions: 3898
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3847
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)