| Clone Name | basd13k19 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 396 bits (200), Expect = e-107 Identities = 257/276 (93%) Strand = Plus / Plus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 644819 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 644820 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctc 644879 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 644880 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 644939 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 644940 ctccgcgaggagcgccgcgcccacgccctccagctc 644975 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 644399 gctagggttttcgccatggctaccacccacc 644429
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 396 bits (200), Expect = e-107 Identities = 257/276 (93%) Strand = Plus / Plus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 609070 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 609071 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctc 609130 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 609131 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 609190 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 609191 ctccgcgaggagcgccgcgcccacgccctccagctc 609226 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 608650 gctagggttttcgccatggctaccacccacc 608680
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 396 bits (200), Expect = e-107 Identities = 257/276 (93%) Strand = Plus / Plus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 608951 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 609010 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 609011 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 609070 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 609071 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctc 609130 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 609131 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 609190 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 609191 ctccgcgaggagcgccgcgcccacgccctccagctc 609226 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 608650 gctagggttttcgccatggctaccacccacc 608680
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 396 bits (200), Expect = e-107 Identities = 257/276 (93%) Strand = Plus / Plus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644700 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 644759 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 644760 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 644819 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 644820 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctc 644879 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 644880 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 644939 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 644940 ctccgcgaggagcgccgcgcccacgccctccagctc 644975 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 644399 gctagggttttcgccatggctaccacccacc 644429
>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 181322 Score = 396 bits (200), Expect = e-107 Identities = 257/276 (93%) Strand = Plus / Minus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134021 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 133962 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 133961 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 133902 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 133901 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctc 133842 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 133841 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 133782 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 133781 ctccgcgaggagcgccgcgcccacgccctccagctc 133746 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 134322 gctagggttttcgccatggctaccacccacc 134292
>emb|BX000510.1|CNS08CE0 Oryza sativa chromosome 12, . BAC OJ1769_D07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115859 Score = 396 bits (200), Expect = e-107 Identities = 257/276 (93%) Strand = Plus / Minus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4143 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 4084 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 4083 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 4024 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| Sbjct: 4023 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcctcctcaccctc 3964 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 3963 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 3904 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 3903 ctccgcgaggagcgccgcgcccacgccctccagctc 3868 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 4444 gctagggttttcgccatggctaccacccacc 4414
>dbj|AK068644.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J09, full insert sequence Length = 3185 Score = 389 bits (196), Expect = e-105 Identities = 256/276 (92%) Strand = Plus / Plus Query: 345 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 331 cggataatgtgtatactgtgcgccgtgcaacggtggtcgcggcgcgtcgccaccatgctg 390 Query: 405 ccgtggctcgtcctcccgctcatcctcctctgggcgctctcccagctcctgcccacagcc 464 || ||||| || |||||||||||||||||||||||||||||||||||||| ||| | ||| Sbjct: 391 ccatggctggtgctcccgctcatcctcctctgggcgctctcccagctcctccccgccgcc 450 Query: 465 taccgcttcgaggtcacctctccgcgcctcgcctgtgtctccgtcctcctcctcaccctc 524 |||||||||||||||||||| || ||||||||||| |||||||||||| ||||||||||| Sbjct: 451 taccgcttcgaggtcacctcccctcgcctcgcctgcgtctccgtcctcatcctcaccctc 510 Query: 525 ttctggtacgagattcttctcccacgcctctcgctctggcgcgcacgccgctccgcgcgc 584 |||||||||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||| Sbjct: 511 ttctggtacgagatcctcctcccccgcctctccctctggcgcgcccgccgctccgcccgc 570 Query: 585 cttcgcgaggagcgccgtgcccacgctctcgagctc 620 || |||||||||||||| |||||||| ||| ||||| Sbjct: 571 ctccgcgaggagcgccgcgcccacgccctccagctc 606 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 33 gctagggttttcgccatggccaccgcccacc 63 |||||||||||||||||||| ||| |||||| Sbjct: 30 gctagggttttcgccatggctaccacccacc 60
>gb|AC005293.1| Homo sapiens 12p13.3 PAC RPCI5-977L1 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 143334 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 441 ctctcccagctcctgcccacagcct 465 ||||||||||||||||||||||||| Sbjct: 30231 ctctcccagctcctgcccacagcct 30207
>gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 202972 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 72 ctccacccctcccccattcccaa 94 ||||||||||||||||||||||| Sbjct: 80196 ctccacccctcccccattcccaa 80174
>ref|XM_782238.1| PREDICTED: Strongylocentrotus purpuratus similar to tyrosine kinase receptor family member (101.6 kD) (5G9) (LOC582279), mRNA Length = 2334 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 506 cgtcctcctcctcaccctcttc 527 |||||||||||||||||||||| Sbjct: 45 cgtcctcctcctcaccctcttc 66
>gb|AC093659.4| Homo sapiens BAC clone RP11-468M15 from 7, complete sequence Length = 103787 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 444 tcccagctcctgcccacagcct 465 |||||||||||||||||||||| Sbjct: 99949 tcccagctcctgcccacagcct 99970
>gb|AC128709.6| Homo sapiens 3 BAC RP13-616I3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163031 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 62 cctcgagctcctccacccctccccca 87 |||| ||||||||||||||||||||| Sbjct: 42135 cctccagctcctccacccctccccca 42110
>ref|NM_006160.2| Homo sapiens neurogenic differentiation 2 (NEUROD2), mRNA Length = 2019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 1635 cacccctcccccattcccaat 1655
>gb|AC025353.9| Mus musculus chromosome 9, clone RP23-93E19, complete sequence Length = 274853 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 538 ttcttctcccacgcctctcgctctg 562 ||||||||||||||||||| ||||| Sbjct: 230975 ttcttctcccacgcctctccctctg 230951
>emb|AL732423.12| Human DNA sequence from clone RP11-345L8 on chromosome X Contains the 3' end of the SH3KBP1 gene for SH3-domain kinase binding protein 1 (CIN85) and the 5' end of the gene for a novel protein similar to mitogen-activated protein kinase kinase kinase 5 (MAP3K5), complete sequence Length = 173520 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 tcctcctcctcaccctcttct 528 ||||||||||||||||||||| Sbjct: 13807 tcctcctcctcaccctcttct 13787
>emb|CR954985.1| Human DNA sequence from clone XX-HCC1954_35K08, complete sequence Length = 164576 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 132260 cacccctcccccattcccaat 132240
>gb|AC105586.5| Rattus norvegicus 3 BAC CH230-239D4 (Children's Hospital Oakland Research Institute) complete sequence Length = 235468 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 508 tcctcctcctcaccctcttct 528 ||||||||||||||||||||| Sbjct: 221144 tcctcctcctcaccctcttct 221124
>gb|AC162905.4| Mus musculus BAC clone RP24-281B12 from chromosome 9, complete sequence Length = 205771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 538 ttcttctcccacgcctctcgctctg 562 ||||||||||||||||||| ||||| Sbjct: 187893 ttcttctcccacgcctctccctctg 187869
>gb|BC022481.1| Homo sapiens neurogenic differentiation 2, mRNA (cDNA clone MGC:26304 IMAGE:4816285), complete cds Length = 2019 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 1635 cacccctcccccattcccaat 1655
>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence Length = 157216 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 35763 cacccctcccccattcccaat 35743
>emb|CR624963.1| full-length cDNA clone CS0DF008YN08 of Fetal brain of Homo sapiens (human) Length = 1938 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 1586 cacccctcccccattcccaat 1606
>emb|CR590531.1| full-length cDNA clone CS0DF027YM01 of Fetal brain of Homo sapiens (human) Length = 1950 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 1617 cacccctcccccattcccaat 1637
>dbj|AK156645.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830034M11 product:unclassifiable, full insert sequence Length = 3297 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gtcctcctcctcaccctcttc 527 ||||||||||||||||||||| Sbjct: 208 gtcctcctcctcaccctcttc 228
>dbj|AB021742.1| Homo sapiens NDRF mRNA for neuroD-related factor, complete cds Length = 6246 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 4613 cacccctcccccattcccaat 4633
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 ggctcgtcctcccgctcatcctcct 433 ||||||||||||| ||||||||||| Sbjct: 1874483 ggctcgtcctccccctcatcctcct 1874507
>gb|AF177040.1| Synthetic construct clone pH77(p7)-J6S hepatitis C virus, complete genome Length = 9611 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7155 cctcccgctcatcctcctctg 7135
>gb|AF177039.1| Synthetic construct clone pH77-J6S hepatitis C virus, complete genome Length = 9611 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7155 cctcccgctcatcctcctctg 7135
>gb|AF177038.1| Synthetic construct clone pH77(p7)CV-J6S hepatitis C virus, complete genome Length = 9611 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7155 cctcccgctcatcctcctctg 7135
>gb|AF177037.1| Synthetic construct clone pH77CV-J6S hepatitis C virus, complete genome Length = 9611 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7155 cctcccgctcatcctcctctg 7135
>gb|AC122281.2| Mus musculus chromosome 16 clone RP23-239I17, complete sequence Length = 204608 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gtcctcctcctcaccctcttc 527 ||||||||||||||||||||| Sbjct: 176455 gtcctcctcctcaccctcttc 176475
>gb|AF290978.1|AF290978 Hepatitis C virus isolate colonel complete genome Length = 9365 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7131 cctcccgctcatcctcctctg 7111
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 ggctcgtcctcccgctcatcctcct 433 ||||||||||||| ||||||||||| Sbjct: 3263 ggctcgtcctccccctcatcctcct 3287
>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001H02 Length = 147160 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 409 ggctcgtcctcccgctcatcctcct 433 ||||||||||||| ||||||||||| Sbjct: 74961 ggctcgtcctccccctcatcctcct 74985
>dbj|AK063692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F10, full insert sequence Length = 1546 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 409 ggctcgtcctcccgctcatcctcct 433 ||||||||||||| ||||||||||| Sbjct: 403 ggctcgtcctccccctcatcctcct 379
>gb|U58681.1|HSU58681 Homo sapiens neurogenic basic-helix-loop-helix protein (NeuroD2) gene, complete cds Length = 1550 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 cacccctcccccattcccaat 95 ||||||||||||||||||||| Sbjct: 1491 cacccctcccccattcccaat 1511
>gb|AC150034.2| Mus musculus BAC clone RP23-428H16 from 16, complete sequence Length = 187989 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 507 gtcctcctcctcaccctcttc 527 ||||||||||||||||||||| Sbjct: 49188 gtcctcctcctcaccctcttc 49208
>gb|AF011753.1|AF011753 Hepatitis C virus strain H77 pH21 polyprotein gene, complete cds Length = 9599 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7143 cctcccgctcatcctcctctg 7123
>gb|AF011752.1|AF011752 Hepatitis C virus strain H77 pCV-H11 polyprotein gene, complete cds Length = 9599 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7143 cctcccgctcatcctcctctg 7123
>gb|AF011751.1|AF011751 Hepatitis C virus strain H77 pCV-H77C polyprotein gene, complete cds Length = 9599 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7143 cctcccgctcatcctcctctg 7123
>gb|AF009606.1|AF009606 Hepatitis C virus polyprotein gene, complete cds Length = 9646 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7143 cctcccgctcatcctcctctg 7123
>emb|AL672219.7| Mouse DNA sequence from clone RP23-456B9 on chromosome 9, complete sequence Length = 206125 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 538 ttcttctcccacgcctctcgctctg 562 ||||||||||||||||||| ||||| Sbjct: 80998 ttcttctcccacgcctctccctctg 81022
>gb|M67463.1|HPCCGAA Hepatitis C virus, complete genome Length = 9416 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 416 cctcccgctcatcctcctctg 436 ||||||||||||||||||||| Sbjct: 7143 cctcccgctcatcctcctctg 7123
>gb|L24391.1|ASTDBP Arena sativa DNA binding protein (PF-1) mRNA, complete cds Length = 960 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 gagggctttggcggcggcggt 344 ||||||||||||||||||||| Sbjct: 408 gagggctttggcggcggcggt 388
>gb|BT020513.1| Arabidopsis thaliana At5g24520 gene, complete cds Length = 1026 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 550 ggagaagctagggttttcgc 569
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 tcgtcctcccgctcatcctcctct 435 |||||||||||||| ||||||||| Sbjct: 46619 tcgtcctcccgctcttcctcctct 46642
>gb|AC114663.8| Mus musculus chromosome 1, clone RP24-172O22, complete sequence Length = 167652 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 31690 tcctcctcctcaccctcttc 31709
>ref|NM_122360.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide binding AT5G24520 (TTG1) transcript variant AT5G24520.3 mRNA, complete cds Length = 1491 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 664 ggagaagctagggttttcgc 683
>ref|NM_180739.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide binding AT5G24520 (TTG1) transcript variant AT5G24520.2 mRNA, complete cds Length = 1436 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 664 ggagaagctagggttttcgc 683
>ref|NM_180738.2| Arabidopsis thaliana TTG1 (TRANSPARENT TESTA GLABRA 1); nucleotide binding AT5G24520 (TTG1) transcript variant AT5G24520.1 mRNA, complete cds Length = 1561 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 664 ggagaagctagggttttcgc 683
>gb|BT020231.1| Arabidopsis thaliana At5g24520 gene, complete cds Length = 1254 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 604 ggagaagctagggttttcgc 623
>ref|XM_473969.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 tcgtcctcccgctcatcctcctct 435 |||||||||||||| ||||||||| Sbjct: 403 tcgtcctcccgctcttcctcctct 380
>ref|XM_465098.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1605 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ccgtcctcctcctcaccctc 524 |||||||||||||||||||| Sbjct: 294 ccgtcctcctcctcaccctc 275
>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence Length = 147518 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 44043 tcctcctcctcaccctcttc 44062
>gb|AC158967.5| Mus musculus chromosome 1, clone RP23-39N17, complete sequence Length = 244130 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 123554 tcctcctcctcaccctcttc 123573
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 ggcgctggcgatcgagctcc 319 |||||||||||||||||||| Sbjct: 25791 ggcgctggcgatcgagctcc 25810
>gb|AC113983.13| Mus musculus chromosome 5, clone RP24-95M11, complete sequence Length = 198590 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gagctcctccacccctcccccatt 89 |||||||||| ||||||||||||| Sbjct: 27333 gagctcctcctcccctcccccatt 27310
>ref|XM_370155.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06652.4) partial mRNA Length = 2127 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 506 cgtcctcctcctcaccctct 525 |||||||||||||||||||| Sbjct: 805 cgtcctcctcctcaccctct 786
>ref|XM_607249.2| PREDICTED: Bos taurus similar to Neurogenic differentiation factor 2 (NeuroD2) (Brain bHLH protein KW8) (LOC528817), mRNA Length = 1793 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 acccctcccccattcccaat 95 |||||||||||||||||||| Sbjct: 1440 acccctcccccattcccaat 1459
>ref|NM_207397.1| Homo sapiens CD164 sialomucin-like 2 (CD164L2), mRNA Length = 1517 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cccagctcctgcccacagcc 464 |||||||||||||||||||| Sbjct: 925 cccagctcctgcccacagcc 906
>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence Length = 219617 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 178256 tcctcctcctcaccctcttc 178275
>gb|BT011856.1| Arabidopsis thaliana At5g24520 mRNA sequence Length = 1023 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 547 ggagaagctagggttttcgc 566
>ref|XM_751925.1| Ustilago maydis 521 hypothetical protein (UM00871.1) partial mRNA Length = 3090 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 aagctagggttttcgccatg 50 |||||||||||||||||||| Sbjct: 3065 aagctagggttttcgccatg 3084
>emb|AM055906.1| Hepatitis C virus partial NS5A gene for non structural protein 5A, isolate NR4 Length = 342 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 ctcccgctcatcctcctctg 436 |||||||||||||||||||| Sbjct: 321 ctcccgctcatcctcctctg 302
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 556 cgctctggcgcgcacgccgc 575 |||||||||||||||||||| Sbjct: 3800201 cgctctggcgcgcacgccgc 3800220
>ref|XM_389862.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG09686.1) partial mRNA Length = 2094 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 tggtcgcggcgcgtcgccaccatg 401 ||||||||||||| |||||||||| Sbjct: 1992 tggtcgcggcgcgccgccaccatg 1969
>gb|AC117214.3| Mus musculus BAC clone RP23-307B15 from chromosome 9, complete sequence Length = 219833 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 tctccgtcctcctcctcaccctct 525 ||||| |||||||||||||||||| Sbjct: 148186 tctccttcctcctcctcaccctct 148163
>gb|AC122378.4| Mus musculus BAC clone RP23-474C9 from chromosome 15, complete sequence Length = 203662 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 cctcctcctcaccctcttct 528 |||||||||||||||||||| Sbjct: 43932 cctcctcctcaccctcttct 43913
>gb|AY358761.1| Homo sapiens clone DNA139623 EAPG6122 (UNQ6122) mRNA, complete cds Length = 1517 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 445 cccagctcctgcccacagcc 464 |||||||||||||||||||| Sbjct: 925 cccagctcctgcccacagcc 906
>ref|XM_853802.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily C, member 1, transcript variant 2 (LOC607587), mRNA Length = 1579 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 tcgtcctcccgctcatcctcctct 435 ||||||||| |||||||||||||| Sbjct: 1069 tcgtcctcctgctcatcctcctct 1046
>ref|XM_844389.1| PREDICTED: Canis familiaris similar to DnaJ (Hsp40) homolog, subfamily C, member 1, transcript variant 1 (LOC607587), mRNA Length = 2085 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 tcgtcctcccgctcatcctcctct 435 ||||||||| |||||||||||||| Sbjct: 1575 tcgtcctcctgctcatcctcctct 1552
>gb|AC113126.10| Mus musculus chromosome 6, clone RP23-352D5, complete sequence Length = 176364 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 49362 tcctcctcctcaccctcttc 49381
>emb|AL096774.9|HSDJ144C9 Human DNA sequence from clone RP1-144C9 on chromosome 1p34.3-36.11 Contains the gene for a novel protein, a ribosomal protein S24 (RPS24) pseudogene, the GPR3 gene for G protein-coupled receptor 3 and the 3' end of the WASF2 gene for WAS protein family, member 2, complete sequence Length = 77322 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 cccagctcctgcccacagcc 464 |||||||||||||||||||| Sbjct: 3463 cccagctcctgcccacagcc 3482
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 tcgtcctcccgctcatcctcctct 435 |||||||||||||| ||||||||| Sbjct: 58370 tcgtcctcccgctcttcctcctct 58393
>emb|AL671983.18| Mouse DNA sequence from clone RP23-232B3 on chromosome X, complete sequence Length = 176577 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 121287 tcctcctcctcaccctcttc 121306
>emb|AJ586862.1| Matthiola incana partial ttg1 gene for transparenta testa glabra 1 protein, exons 1-2, strain 17 Length = 1981 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 340 ggagaagctagggttttcgc 359
>emb|AJ586861.1| Matthiola incana partial ttg1 gene for transparenta testa glabra 1 protein, exons 1-2, strain 04 Length = 2155 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 514 ggagaagctagggttttcgc 533
>dbj|AK139997.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230035J22 product:hypothetical protein, full insert sequence Length = 3176 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 1779 tcctcctcctcaccctcttc 1798
>ref|XM_690626.1| PREDICTED: Danio rerio similar to immunoglobulin superfamily, member 9 (LOC567334), mRNA Length = 3618 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 tcctcccgctcatcctcctctggg 438 ||||||| |||||||||||||||| Sbjct: 3329 tcctccccctcatcctcctctggg 3306
>ref|XM_685829.1| PREDICTED: Danio rerio similar to MGC80493 protein (LOC562449), mRNA Length = 2286 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 tcctcccgctcatcctcctctggg 438 ||||||| |||||||||||||||| Sbjct: 119 tcctccccctcatcctcctctggg 96
>ref|XM_703480.1| PREDICTED: Danio rerio similar to coproporphyrinogen oxidase, transcript variant 3 (LOC563860), mRNA Length = 2107 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tgtctccgtcctcctcctca 519 |||||||||||||||||||| Sbjct: 491 tgtctccgtcctcctcctca 472
>ref|XM_703479.1| PREDICTED: Danio rerio similar to coproporphyrinogen oxidase, transcript variant 2 (LOC563860), mRNA Length = 1414 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tgtctccgtcctcctcctca 519 |||||||||||||||||||| Sbjct: 491 tgtctccgtcctcctcctca 472
>ref|XM_681813.1| PREDICTED: Danio rerio similar to coproporphyrinogen oxidase, transcript variant 1 (LOC563860), mRNA Length = 2089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tgtctccgtcctcctcctca 519 |||||||||||||||||||| Sbjct: 491 tgtctccgtcctcctcctca 472
>dbj|AB169249.1| Macaca fascicularis testis cDNA, clone: QtsA-18213, similar to human hypothetical protein FLJ90652 (FLJ90652), mRNA, RefSeq: NM_173618.1 Length = 4958 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 502 tctccgtcctcctcctcaccctcttctg 529 ||||| ||||||||||| |||||||||| Sbjct: 4001 tctccctcctcctcctctccctcttctg 3974
>dbj|AK048555.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130073J24 product:unclassifiable, full insert sequence Length = 3914 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ctcctccacccctcccccattccc 92 |||||||| ||||||||||||||| Sbjct: 2394 ctcctccatccctcccccattccc 2417
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 tcgtcctcccgctcatcctcctct 435 |||||||||||||| ||||||||| Sbjct: 31885504 tcgtcctcccgctcttcctcctct 31885527
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gcctcgcctgtgtctccgtc 509 |||||||||||||||||||| Sbjct: 7718955 gcctcgcctgtgtctccgtc 7718974
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ccgtcctcctcctcaccctc 524 |||||||||||||||||||| Sbjct: 11477801 ccgtcctcctcctcaccctc 11477782
>emb|BX826716.1|CNS0A3AA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB57ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1782 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 509 cctcctcctcaccctcttct 528 |||||||||||||||||||| Sbjct: 1499 cctcctcctcaccctcttct 1480
>emb|BX830220.1|CNS0A18T Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1346 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 643 ggagaagctagggttttcgc 662
>emb|BX832324.1|CNS0A158 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH65ZH07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1284 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 625 ggagaagctagggttttcgc 644
>emb|BX831455.1|CNS0A0UO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS92ZD04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1386 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 635 ggagaagctagggttttcgc 654
>emb|BX831165.1|CNS0A0UA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS63ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1303 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 627 ggagaagctagggttttcgc 646
>emb|BX830656.1|CNS0A0Q5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZE09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1307 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 632 ggagaagctagggttttcgc 651
>dbj|AB117764.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1, complete cds, allele: ttg1-26 Length = 2753 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 1355 ggagaagctagggttttcgc 1374
>dbj|AB117763.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1, complete cds, allele: ttg1-25 Length = 2752 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 1356 ggagaagctagggttttcgc 1375
>dbj|AB117762.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1, complete cds, allele: ttg1-24 Length = 2749 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 1351 ggagaagctagggttttcgc 1370
>dbj|AB117761.1| Arabidopsis thaliana AT5G24520.1 gene for mutant protein of TTG1, complete cds, allele: ttg1-23 Length = 2753 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 1355 ggagaagctagggttttcgc 1374
>ref|NM_001033377.1| Mus musculus RIKEN cDNA 9330158H04 gene (9330158H04Rik), mRNA Length = 3176 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 1779 tcctcctcctcaccctcttc 1798
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0030M21 Length = 155970 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ccgtcctcctcctcaccctc 524 |||||||||||||||||||| Sbjct: 60293 ccgtcctcctcctcaccctc 60274
>emb|AL845312.3| Zebrafish DNA sequence from clone DKEY-287F10, complete sequence Length = 174959 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 tcctcccgctcatcctcctctggg 438 ||||||| |||||||||||||||| Sbjct: 143876 tcctccccctcatcctcctctggg 143853
>dbj|AB010068.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18P6 Length = 74589 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 6549 ggagaagctagggttttcgc 6530
>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0494D11 Length = 149198 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gcctcgcctgtgtctccgtc 509 |||||||||||||||||||| Sbjct: 144150 gcctcgcctgtgtctccgtc 144169
>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1221_H04 Length = 129387 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 gcctcgcctgtgtctccgtc 509 |||||||||||||||||||| Sbjct: 59678 gcctcgcctgtgtctccgtc 59697
>ref|XM_561521.1| Anopheles gambiae str. PEST ENSANGP00000028107 (ENSANGG00000022232), partial mRNA Length = 1680 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ccacctcgagctcctccacc 78 |||||||||||||||||||| Sbjct: 1397 ccacctcgagctcctccacc 1416
>emb|AJ251523.1|ATH251523 Arabidopsis thaliana ecotype Estland ttg1 gene for transparent testa glabra 1, exons 1-2 hlm mutant allele Length = 2051 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 646 ggagaagctagggttttcgc 665
>emb|AJ251522.1|ATH251522 Arabidopsis thaliana ecotype Estland TTG1 gene for transparent testa glabra 1, exons 1-2 wild type allele Length = 2034 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 629 ggagaagctagggttttcgc 648
>emb|AJ133743.1|ATH133743 Arabidopsis thaliana ttg1 gene Length = 5777 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 3930 ggagaagctagggttttcgc 3949
>dbj|AK105486.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-B08, full insert sequence Length = 1605 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 ccgtcctcctcctcaccctc 524 |||||||||||||||||||| Sbjct: 294 ccgtcctcctcctcaccctc 275
>dbj|AK101027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023150F02, full insert sequence Length = 3504 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 tcgtcctcccgctcatcctcctct 435 |||||||||||||| ||||||||| Sbjct: 2581 tcgtcctcccgctcttcctcctct 2604
>emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 in linkage group 8, complete sequence Length = 169530 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 500 tgtctccgtcctcctcctca 519 |||||||||||||||||||| Sbjct: 68651 tgtctccgtcctcctcctca 68632
>dbj|D90360.1|MUSCYTK Mus musculus gene for cytokeratin endo A, complete cds Length = 10247 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ccacccctcccccattccca 93 |||||||||||||||||||| Sbjct: 7372 ccacccctcccccattccca 7353
>emb|AJ875188.1| Malcolmia flexuosa subsp. naxensis partial ttg1 gene for transparent testa glabra protein 1 Length = 737 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 319 ggagaagctagggttttcgc 338
>emb|AJ875187.1| Matthiola tricuspidata partial ttg1 gene for transparent testa glabra 1 protein Length = 737 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggagaagctagggttttcgc 46 |||||||||||||||||||| Sbjct: 319 ggagaagctagggttttcgc 338
>emb|AL732478.7| Mouse DNA sequence from clone RP23-42N14 on chromosome 2, complete sequence Length = 203434 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ctcctccacccctcccccattccc 92 |||||||| ||||||||||||||| Sbjct: 66540 ctcctccatccctcccccattccc 66563
>gb|M32612.1|RATNCAMC Rat neural cell adhesion molecule (NCAM-C) gene, exon 1 Length = 1195 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tcctcctcctcaccctcttc 527 |||||||||||||||||||| Sbjct: 349 tcctcctcctcaccctcttc 330 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,850,044 Number of Sequences: 3902068 Number of extensions: 4850044 Number of successful extensions: 107081 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 115 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106343 Number of HSP's gapped (non-prelim): 738 length of query: 620 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 597 effective length of database: 17,143,297,704 effective search space: 10234548729288 effective search space used: 10234548729288 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)